mRNA_A-nodosum_M_contig10701.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: D7G6N9_ECTSI (Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N9_ECTSI) HSP 1 Score: 280 bits (717), Expect = 2.400e-82 Identity = 154/219 (70.32%), Postives = 175/219 (79.91%), Query Frame = 3
Query: 6 AKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEPQLVLAGDTVRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQEYTTRVGIH 662
A EVMTPNPT+V +E AMEAL IML RHFRHLPVR+PRGDVT +LDIAKCLYDAVSRLQR A+++ ++ G AD ++SMLAELGKGKGKKSKAAMQ LLA M D G+ V +LSL ELLK KGEPQLV A D+ R AGKAIARGRKAVLVVD+G L GIFTEKD+LNRVL+KG++PD V DVMTPNPDTVSSTMTV+EALQE +H
Sbjct: 1560 ASEVMTPNPTTVLSEDSAMEALSIMLGRHFRHLPVRTPRGDVTGILDIAKCLYDAVSRLQRTAKRKSVDS---GEADEAEMSMLAELGKGKGKKSKAAMQALLAKMFADDPEGGTGV-SLSLAELLKLKGEPQLVFADDSARGAGKAIARGRKAVLVVDNGGLAGIFTEKDMLNRVLSKGINPDEVSVEDVMTPNPDTVSSTMTVLEALQEMHENKYLH 1774
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: A0A836CBL7_9STRA (Myosin 29 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL7_9STRA) HSP 1 Score: 184 bits (466), Expect = 9.860e-49 Identity = 109/226 (48.23%), Postives = 141/226 (62.39%), Query Frame = 3
Query: 3 SAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEE---KEASAGGGADGVD---LSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEPQLVLAGDTVRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQEYTTRVGIH 662
S VMT +P V+ E AMEALG+M+ERHFRHLPV G VT VLDIAKCLYDA++RL+R K+ ++ AG GA+ + ++M KG A MQ L+ M GD G SL+++LK G+ V DTVR A A+A GRKAV+VV+ G LVGI T KDLLNRVLAK PD T+V++VMTPNPD+V + M V++AL + + +H
Sbjct: 1557 SVASVMTQSPRCVAMEDSAMEALGVMIERHFRHLPVTDASGAVTGVLDIAKCLYDAITRLERVMAKQSSHSQDLKAGQGAEALKQLTMAMKQHNRKGMSSAQAATMQMLMMQMFGD-------EGEPSLQDVLKTAGQAMFVSPRDTVRDAATAMANGRKAVVVVERGKLVGILTPKDLLNRVLAKDRSPDDTLVSEVMTPNPDSVPADMPVLDALHQMHEQRYLH 1775
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: A0A6H5K5J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5J8_9PHAE) HSP 1 Score: 160 bits (406), Expect = 8.890e-41 Identity = 106/225 (47.11%), Postives = 134/225 (59.56%), Query Frame = 3
Query: 15 VMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAEL--------GKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELL-KQKGEPQLVLAGDTVRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQEYTTRVGIH 662
VMTP+P V+ AM+AL MLE H RHLPV S G V+ +L+IAKCLYDA+ RL++ A + E+E GGG G + A L K GK + AAM LL G G + + +L ++L +Q GE GD+ GKAI+R +KAVLV+ +G L GI T KDLL RV+AKGLDPD T V+ VMTPNPD V MTVIEAL+E +H
Sbjct: 439 VMTPDPIWVTTTDNAMDALETMLETHSRHLPVVSEEGAVSGMLNIAKCLYDAIRRLEKRALRAEEEG--GGGLSGEKQELAASLMKMHSMKGAKKNGKDTLAAMTMLL-----QGLSDGEEASDPTLEDILSEQTGE--FAEEGDSAAACGKAISRSKKAVLVLRNGRLAGIVTPKDLLMRVVAKGLDPDATPVSAVMTPNPDAVPPAMTVIEALREMHENKYLH 654
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: B7G2M6_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2M6_PHATC) HSP 1 Score: 152 bits (385), Expect = 1.430e-39 Identity = 101/212 (47.64%), Postives = 133/212 (62.74%), Query Frame = 3
Query: 3 SAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEP-QLVLAGDTVRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQ 635
S EVMTPNPT V+ AM+AL M+E HFRHLPV +G V +LDIAKCL DA+S+L+R +EK A D V M+A+ +G G AA++ LL +++ G G + +LR LL G+P LV ++R G +A RKA LVVDDG LVG+FT KD+++R +AK LD D T V+ VMTP+P+ VS MTV+EALQ
Sbjct: 72 SVSEVMTPNPTCVAMSDSAMDALTTMVENHFRHLPVVDDQGSVVGLLDIAKCLNDAISKLERTSEKTNSAAE-----DAVKQ-MVAQ--QGAGGAQAAALKALLGNLMSQAFG-GKQMP--TLRSLLA--GKPGTLVDPSTSIRNCGLRMADSRKAALVVDDGELVGVFTFKDMMSRAVAKELDLDVTPVSQVMTPSPEFVSPDMTVLEALQ 270
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: A0A7S2PMW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PMW1_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.740e-39 Identity = 97/212 (45.75%), Postives = 134/212 (63.21%), Query Frame = 3
Query: 3 SAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEPQLVLAGDT-VRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQ 635
S VMT NPT V+ AM+ALG M+E HFRHLPV G V +LDIAKCL DA+S+L+++ K++ A+A D V +A L +G G AA+Q LL ++ G+ G+ +LR LL G+P +++ T +R G +A RKA LVV+DG LVGIF KD+++R +AKGL + T V+ VMTP+P+TVS +TV+EALQ
Sbjct: 90 SISSVMTANPTCVAMSDSAMDALGTMVENHFRHLPVVDDNGGVVGLLDIAKCLNDAISKLEKSESKKDGNAAA----DAVK--QMASL-QGAGGAQAAALQALLGPLMAQA--FGNTGGSPTLRSLLA--GKPATIVSPQTNLRDTGIKMAEARKASLVVEDGRLVGIFGFKDMMSRAVAKGLPLESTPVSQVMTPDPETVSPDITVLEALQ 290
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: A0A7S3M8U3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8U3_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.800e-38 Identity = 97/235 (41.28%), Postives = 135/235 (57.45%), Query Frame = 3
Query: 15 VMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAA----EKEEKEASAGGGADG---VDLSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNL-SLRELLKQKGEPQLVLAGDTVRTAGKAIARGRKAVLVVD---DGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQEYTTRVGIHRIQPECGG 686
VMT NP V + A++AL +M++ FRHLPV +G V +LDIAKCLYDA+S L++ E EK+ + G A + A G+G K+ A+Q ++ +M G G + +LR +L G+ Q VL G T+ A K +A RK VLV+D L+GI T KDLLNRV+AKGL PD T+V++VMTPNPD V+ +T++EAL+E +H E G
Sbjct: 103 VMTKNPKCVQSADSALDALEMMVDNRFRHLPVMDEQGVVVGLLDIAKCLYDAISVLEKVQGGGEEGSEKDGAGTGNAMAKAMTEAMKKAAGGRGTNKQQLLAIQAMMETMFG---------GEVPTLRTILGGSGKVQSVLPGATITEASKLMAEMRKGVLVMDAKRGKELLGILTPKDLLNRVIAKGLSPDETLVSEVMTPNPDCVTGDLTLLEALREMYEHKYLHLPVREADG 328
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: C6JVY2_PHATR (Myosin 29 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=C6JVY2_PHATR) HSP 1 Score: 152 bits (385), Expect = 6.060e-38 Identity = 101/212 (47.64%), Postives = 133/212 (62.74%), Query Frame = 3
Query: 3 SAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEP-QLVLAGDTVRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQ 635
S EVMTPNPT V+ AM+AL M+E HFRHLPV +G V +LDIAKCL DA+S+L+R +EK A D V M+A+ +G G AA++ LL +++ G G + +LR LL G+P LV ++R G +A RKA LVVDDG LVG+FT KD+++R +AK LD D T V+ VMTP+P+ VS MTV+EALQ
Sbjct: 1859 SVSEVMTPNPTCVAMSDSAMDALTTMVENHFRHLPVVDDQGSVVGLLDIAKCLNDAISKLERTSEKTNSAAE-----DAVKQ-MVAQ--QGAGGAQAAALKALLGNLMSQAFG-GKQMP--TLRSLLA--GKPGTLVDPSTSIRNCGLRMADSRKAALVVDDGELVGVFTFKDMMSRAVAKELDLDVTPVSQVMTPSPEFVSPDMTVLEALQ 2057
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: A0A7R9VL18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VL18_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.410e-37 Identity = 97/212 (45.75%), Postives = 128/212 (60.38%), Query Frame = 3
Query: 3 SAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEPQLVLAGDT-VRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQ 635
S VMT +PT VS AM+AL M+E HFRHLPV G V +LDIAKCL DA+S+L+RA EK G A + +A L +G G A +Q+LL ++ G D + +LR LL G+P V+ +T + AG+ +A RKA LVV+DG LVGIF KD+++R +AK L D T V+ VMTPNP++VS TV+EALQ
Sbjct: 96 SVSAVMTASPTCVSMTDSAMDALATMVENHFRHLPVVDDNGAVVGLLDIAKCLNDAISKLERAQEKS-------GSAAEDAVKQMANL-QGAGGAQAAMLQQLLGPLMSQAFG---DKASPTLRSLLA--GKPATVVQPNTTLLEAGQVMAEARKAALVVEDGELVGIFGFKDMMSRAVAKELPLDLTNVSSVMTPNPESVSPETTVLEALQ 294
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: A0A7S2RM48_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RM48_9STRA) HSP 1 Score: 144 bits (363), Expect = 4.390e-37 Identity = 93/208 (44.71%), Postives = 126/208 (60.58%), Query Frame = 3
Query: 15 VMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAELGKGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEPQLVLAGDT-VRTAGKAIARGRKAVLVVDDGTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEALQ 635
VMTPNPT VS AM+A+ M+E H+RHLPV G V +LDIAKCL DA+++L+RA EK A+ D V+ +A L +G G A +Q+LL ++ G S +LR LL G P V++ DT + G +A+ RK+ LVV++G LVG+F KD++ R +AK L D T V+ VMTPNP+ VS TV+EALQ
Sbjct: 1 VMTPNPTCVSMTDSAMDAMSTMVENHYRHLPVVDENGAVVGLLDIAKCLNDAITKLERAQEKGSSSAN-----DAVE--QMAAL-QGAGGSQAAMLQQLLGPLMAQAFGNKSSP---TLRSLLA--GRPSTVVSPDTNLLETGMIMAKARKSALVVENGNLVGLFGFKDMMTRAIAKELPLDLTAVSSVMTPNPEAVSPDCTVVEALQ 195
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Match: A0A7S2W475_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W475_9STRA) HSP 1 Score: 139 bits (350), Expect = 3.470e-36 Identity = 91/212 (42.92%), Postives = 123/212 (58.02%), Query Frame = 3
Query: 12 EVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDAVSRLQRAAEKEEKEASAGGGADGVDLSMLAELG----KGKGKKSKAAMQKLLASMLGDGNGAGSDVGNLSLRELLKQKGEPQLVLAGDTVRTAGKAIARGRKAVLVVDD-GTLVGIFTEKDLLNRVLAKGLDPDHTMVADVMTPNPDTVSSTMTVIEAL 632
E+MT NP VS + A EAL +M++ HFRHLPV G + AVLDIAKC+YDA+S++ EK EK G D+S + +G A MQ +L ++ G + SL +L+++ V TVR AGK +A +K V VVD+ G LVG+ T KD+ NRVLAKGL PD T+V DVMTPNP+ V+ +++EAL
Sbjct: 12 EIMTKNPKCVSMDDDATEALVMMMDNHFRHLPVLDASGSIVAVLDIAKCMYDAISKI----EKLEKHGKGSG-----DVSQAVKQATRGIRGMSVDQAAVMQAMLGPLMEKMFGGNAQ----SLGTILEKRDFSDSVPPEMTVREAGKVMASIKKGVGVVDESGALVGLLTLKDMNNRVLAKGLSPDETLVQDVMTPNPEAVAPETSLLEAL 210 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10701.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10701.2.1 >prot_A-nodosum_M_contig10701.2.1 ID=prot_A-nodosum_M_contig10701.2.1|Name=mRNA_A-nodosum_M_contig10701.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=224bp MTPNPTSVSAESGAMEALGIMLERHFRHLPVRSPRGDVTAVLDIAKCLYDback to top mRNA from alignment at A-nodosum_M_contig10701:7380..9494+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10701.2.1 ID=mRNA_A-nodosum_M_contig10701.2.1|Name=mRNA_A-nodosum_M_contig10701.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2115bp|location=Sequence derived from alignment at A-nodosum_M_contig10701:7380..9494+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10701:7380..9494+ >mRNA_A-nodosum_M_contig10701.2.1 ID=mRNA_A-nodosum_M_contig10701.2.1|Name=mRNA_A-nodosum_M_contig10701.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=672bp|location=Sequence derived from alignment at A-nodosum_M_contig10701:7380..9494+ (Ascophyllum nodosum dioecious)back to top |