mRNA_A-nodosum_M_contig1066.8.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1066.8.1 vs. uniprot
Match: D8LB51_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB51_ECTSI) HSP 1 Score: 253 bits (647), Expect = 1.930e-67 Identity = 134/203 (66.01%), Postives = 158/203 (77.83%), Query Frame = 2
Query: 587 GRSDPELVARGKALAARVKELGHTGDWKGVLEALEEGPKNAIVCTVAVNALGRMGKWREAVGVVDGMGEDGDGGGGGDRPDAFVYASAINACGKAGRPVEAVALLSEMPSRGVQPDVVCYGAAIAALSEAAGTQNQISWGSK-TDQGGDGSGRAGKGA---EKSMRAHEEAVTFIQHMRRNGPSPNQQCFASAITACARARDP 1183
GR DP+ V +GK LAAR+KEL D++G+LEALEEGPKNAIVCTVA+ LG+ GKWREAV V+DGMG+ GDG DRPDAF YA+ INACGKAGRPVEAVALL+EMP+R V+PDVVC+G+AI AL E AGTQN+ +WG K D+GG+G + A K RAHE+A+ IQ MRR GPSPN QC+ASAITACARA DP
Sbjct: 179 GRLDPQTVEKGKMLAARIKELAKARDFEGMLEALEEGPKNAIVCTVAITCLGQAGKWREAVEVLDGMGKGGDGS---DRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKPDVVCFGSAIFALGEVAGTQNRSTWGRKGADEGGEGGDKPIASAVADPKPTRAHEKALELIQEMRREGPSPNSQCYASAITACARAHDP 378
BLAST of mRNA_A-nodosum_M_contig1066.8.1 vs. uniprot
Match: A0A6H5KL58_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL58_9PHAE) HSP 1 Score: 230 bits (586), Expect = 4.210e-60 Identity = 125/194 (64.43%), Postives = 146/194 (75.26%), Query Frame = 2
Query: 626 LAARVKELGHTGDWKGVLEALEEGPKNAIVCTVAVNALGRMGKWREAVGVVDGMGEDGDGGGGGDRPDAFVYASAINACGKAGRPVEAVALLSEMPSRGVQPDVVCYGAAIAALSEAAGTQNQISWGSK-TDQGG-------DGSGRAGKGAEKSMRAHEEAVTFIQHMRRNGPSPNQQCFASAITACARARDP 1183
LAAR+KEL D++G+LEALEEGPKNAIVCTVA+ LG+ GKWREAV V+DGMG+ GG DRPDAF YA+ INACGKAGRPVEAVALL+EMP+R V+PDVVC+G+AI AL E AGTQN+ +WG K ++GG D A K RAHE+A+ IQ MRR GPSPN QC+ASAITACARA DP
Sbjct: 2 LAARIKELAKARDFEGMLEALEEGPKNAIVCTVAITCLGQAGKWREAVEVLDGMGK-----GGSDRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKPDVVCFGSAIFALGEVAGTQNRSTWGRKGANEGGXXXXXXXDMPMAAAVAGPKPTRAHEKALELIQDMRREGPSPNSQCYASAITACARAHDP 190 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1066.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1066.8.1 >prot_A-nodosum_M_contig1066.8.1 ID=prot_A-nodosum_M_contig1066.8.1|Name=mRNA_A-nodosum_M_contig1066.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=956bp MLPVVDCHGIIAAYGGGIVSCSTSLARTAEFLLVAPNRPRRQKIPQQHQLback to top mRNA from alignment at A-nodosum_M_contig1066:65221..98356- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1066.8.1 ID=mRNA_A-nodosum_M_contig1066.8.1|Name=mRNA_A-nodosum_M_contig1066.8.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=33136bp|location=Sequence derived from alignment at A-nodosum_M_contig1066:65221..98356- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1066:65221..98356- >mRNA_A-nodosum_M_contig1066.8.1 ID=mRNA_A-nodosum_M_contig1066.8.1|Name=mRNA_A-nodosum_M_contig1066.8.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2868bp|location=Sequence derived from alignment at A-nodosum_M_contig1066:65221..98356- (Ascophyllum nodosum dioecious)back to top |