mRNA_A-nodosum_M_contig1066.13.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1066.13.2
Unique NamemRNA_A-nodosum_M_contig1066.13.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1066.13.2 vs. uniprot
Match: D8LB53_ECTSI (Glutamine amidotransferase type-2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB53_ECTSI)

HSP 1 Score: 507 bits (1306), Expect = 3.350e-175
Identity = 231/289 (79.93%), Postives = 264/289 (91.35%), Query Frame = 2 
Query:  743 MCQLMGMQANTPTDFSFSFRGFRERGGRTGHHVDGWGLAFFQGRGFRLFCDSLPSALSPVANLICAYPIKSRTVIAHVRMATQGEVRMENVHPFTRELWGSYWIFAHNGDVPSAKNAATNGLYA-TKSKQYIPVGDTDSEKAFCYFLNQLLDAFPDGRPNMADVYVELERIWKRLCRDSGVIFNFLLGQNGETLFAGCWPGARPGSKTWNTLYYTIREFPFSTCQLVDDDCEVDFTTVTSPNDRVSVIASSPLTTNEIWYEMARGDFLAFHGGQPFSSAEEFRFHLKTK 1606
            MCQLMGMQANTPTDF FSFRGFRERGGRTG HVDGWG+AFF+G+GFR FCDSLPSALSP+ANLIC YPIK+RTVIAHVRMATQG+VR+ENVHPF+RELWGSYWIFAHNGDVPSAK+ AT  L+  TKSK+Y PVGDTDSE  FC+FLN+LLDAFP   PNMADV+VEL+R+WK LC +SGVIFNFLLGQ G+TLFAGCWPGARPGS+ WN+LYYT+REFPF+TCQL+DDDCEVDF TVT+P+DRV+VIA++PLTTNE+W EMA+GD LAFHGGQPFSS ++FR  L+TK
Sbjct:    1 MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSPIANLICNYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKDPATRALFLQTKSKRYTPVGDTDSEAVFCFFLNRLLDAFPHAPPNMADVFVELKRLWKELCSESGVIFNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQLIDDDCEVDFNTVTTPSDRVAVIATAPLTTNEVWCEMAKGDLLAFHGGQPFSSPDDFRRQLRTK 289
[Close]
BLAST of mRNA_A-nodosum_M_contig1066.13.2 vs. uniprot
Match: A0A7S1J865_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J865_9EUGL)

HSP 1 Score: 315 bits (807), Expect = 7.490e-100
Identity = 153/292 (52.40%), Postives = 197/292 (67.47%), Query Frame = 2 
Query:  713 ISVGLLHWQDMCQLMGMQANTPTDFSFSFRGFRERGGRTGHHVDGWGLAFFQGRGFRLFCDSLPSALSPVANLICAYPIKSRTVIAHVRMATQGEVRMENVHPFTRELWGSYWIFAHNGDVPSAKNAATNGLYATKSKQYIPVGDTDSEKAFCYFLNQLLDAFPDGRP-NMADVYVELERIWKRLC-RDSGVIFNFLLGQNGETLFAGCWPGARPGSKTWNTLYYTIREFPFSTCQLVDDDCEVDFTTVTSPNDRVSVIASSPLTTNEIWYEMARGDFLAFHGGQPFSSAEE 1582
            + V   H + MCQL+GM  NTPTDF FSFRGF ER G T  H DGWG+AF++GRG R F D LP+A SPVA L+  YPIK+  +I+H+R AT G + + NVHPF RELWG YW FAHNGD+       T    A     Y  VGDTDSE AF Y LN+L+  +P+G P   AD+Y+ ++ +++++C R+ G IFNFLL  +G  L  GCWPG+RPGS  +N L+Y +RE+PFS  QL D DC +DF+ VT+P+DRV+VIA+ PLT NE W EM +G+   F  G+P  S  E
Sbjct:    5 VCVPAQHVRTMCQLLGMNCNTPTDFCFSFRGFAERAGHTDVHKDGWGVAFYEGRGLRSFLDVLPAASSPVAKLVRDYPIKTLNMISHIRYATCGSLDLHNVHPFNRELWGKYWTFAHNGDL----GPETRRFLAKSVSPYRAVGDTDSEAAFVYILNELVKLYPNGTPPTTADLYLSVQSLFRQICEREEGCIFNFLLC-DGVDLIVGCWPGSRPGSTVYNGLHYIVREYPFSHAQLADCDCGIDFSEVTTPDDRVAVIATKPLTENETWTEMQKGELFVFRDGRPLRSHAE 291
[Close]
BLAST of mRNA_A-nodosum_M_contig1066.13.2 vs. uniprot
Match: A0A7S2UCJ0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCJ0_9STRA)

HSP 1 Score: 294 bits (752), Expect = 6.070e-89
Identity = 153/283 (54.06%), Postives = 182/283 (64.31%), Query Frame = 2 
Query:  743 MCQLMGMQANTPTDFSFSFRGFRERGGRTGHHVDGWGLAFFQGRGFRLFCDSLPSALSPVANLICAYPIKSRTVIAHVRMATQGEVRMENVHPFTRELWGSYWIFAHNGDVPSAKNAATNG---LYATKSKQ--YIPVGDTDSEKAFCYFLNQLLDAFPDGRPNMADVYVELERIWKRLCRDS--GVIFNFLLGQNGETLFAGCWPGARPGSKTWNTLYYTIREFPFSTCQLVDDDCEVDFTTVTSPNDRVSVIASSPLTTNEIWYEMARGDFLAFHGGQPFS 1570
            MCQL+GM   TPTDF+FSFRGF +RGG T  H  GWGLA ++GRG R F D LP+A SPVA L+  YP+K+  ++AH+R ATQG V +ENVHPF RE+WG  W FAHNG+VP   N        L  T  +Q  Y PVGDTDSE  FC  LN L   F    P +  +Y  ++R    +  D+    I NFLLG    TLFA  WPGARPGS+ WN LYYTIR  PFST +L D D  VDF+ VT+P DRV+VIA+SPLT NE W E  RG  L F  G P+S
Sbjct:    1 MCQLLGMNCATPTDFTFSFRGFAKRGGETDKHEHGWGLAVYEGRGLRTFLDPLPAAKSPVAELVERYPMKTLNMLAHIRYATQGGVNLENVHPFQREMWGIQWSFAHNGEVPKYVNKECKDYPLLGRTNRRQTFYHPVGDTDSEATFCAILNGLRAEFTT-LPTLPVLYETIQRFCSEIVSDNEESTILNFLLGCGQYTLFAYSWPGARPGSQVWNGLYYTIRRPPFSTAKLTDVDYAVDFSQVTTPKDRVAVIATSPLTVNEEWTEFKRGQLLMFDNGHPYS 282
[Close]
BLAST of mRNA_A-nodosum_M_contig1066.13.2 vs. uniprot
Match: A0A7S3PDV2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PDV2_9STRA)

HSP 1 Score: 289 bits (740), Expect = 1.120e-88
Identity = 146/284 (51.41%), Postives = 184/284 (64.79%), Query Frame = 2 
Query:  743 MCQLMGMQANTPTDFSFSFRGFRERGGRTGHHVDGWGLAFFQGRGFRLFCDSLPSALSPVANLICAYPIKSRTVIAHVRMATQGEVRMENVHPFTRELWGSYWIFAHNGDVP-----SAKNAATNGLYATKSKQYIPVGDTDSEKAFCYFLNQLLDAFPDGRPNMADVYVELERIWKRLCRD--SGVIFNFLLGQNGETLFAGCWPGARPGSKTWNTLYYTIREFPFSTCQLVDDDCEVDFTTVTSPNDRVSVIASSPLTTNEIWYEMARGDFLAFHGGQPFSS 1573
            MCQL+GM    PTDFSFS +GF  RGG T  H  GWG A ++GRG R F D+LP+  SP+A LI  Y I++  ++AH+R ATQGEV +ENVHPF+RELWG  W FAHNG+VP     SA N    G    K   + PVGDTDSE  FC  LN L   FP+G P +  ++  L  + + +  D  +  IFNFLLG    T+FA  WPGARPGS+ WN L+Y IRE PFST +L+D D  +DF TVT+P DRV+VI + PLT    W EM RG+ L F+ G+ +S+
Sbjct:    1 MCQLLGMNCAAPTDFSFSLKGFCRRGGATDKHSHGWGTAIYEGRGLRCFHDTLPACKSPIAELIQNYSIRTYNMMAHIRYATQGEVSLENVHPFSRELWGIQWSFAHNGEVPMFTNVSADNVPLLGWTKCKDLHFSPVGDTDSEAVFCAILNALKAEFPEGLPTLPVLHEFLSYVCEEITHDHSNDTIFNFLLGCGQYTMFAYSWPGARPGSEVWNGLHYIIREPPFSTAKLLDVDYTIDFRTVTTPQDRVAVITTKPLTEEPGWREMKRGELLMFNRGKCYST 284
[Close]
BLAST of mRNA_A-nodosum_M_contig1066.13.2 vs. uniprot
Match: A0A0T7BNP9_9CYAN (Glutamine amidotransferase n=1 Tax=Calothrix sp. 336/3 TaxID=1337936 RepID=A0A0T7BNP9_9CYAN)

HSP 1 Score: 276 bits (706), Expect = 1.640e-85
Identity = 138/274 (50.36%), Postives = 180/274 (65.69%), Query Frame = 2 
Query:  743 MCQLMGMQANTPTDFSFSFRGFRERGGRTGHHVDGWGLAFFQGRGFRLFCDSLPSALSPVANLICAYPIKSRTVIAHVRMATQGEVRMENVHPFTRELWGSYWIFAHNGDVPSAKNAATNGLYATKSKQYIPVGDTDSEKAFCYFLNQLLDAFPDGRPNMADVYVELERIWKRLCRDSGVIFNFLLGQNGETLFAGCWPGARPGSKTWNTLYYTIREFPFSTCQLVDDDCEVDFTTVTSPNDRVSVIASSPLTTNEIWYEMARGDFLAFHGGQP 1564
            MCQL+GM  N PTD  FSF GF  RGG+T  H DGWG+AFF+G+G R+F D  PS  SPVA L+ +YPI+S  VIAH+R ATQGE+ +EN HPF RE+WG YW+FAHNGD+P  +  +T        K YIPVG+TDSEKAFC  L  L  AFP G+P++ ++Y  L+++ ++L   S  IFN+LL  +GE  F  C             L Y +R+ PF    L+D D  VDF+ +T+P+DRV+VIA++PLT NE W  +A G+ LAF  G P
Sbjct:    1 MCQLLGMNCNVPTDICFSFEGFAARGGKTDDHKDGWGIAFFEGKGCRIFVDEKPSIASPVAELVRSYPIRSTHVIAHIRKATQGEITLENCHPFRREMWGRYWVFAHNGDLPDFQLGST--------KYYIPVGNTDSEKAFCLILETLRTAFPYGKPSLRELYSVLQQVTQKLA--SHGIFNYLLS-DGEYFFTHC----------STKLCYIVRQAPFVAAHLIDQDVTVDFSELTTPSDRVAVIATTPLTDNETWTAIAPGELLAFQDGLP 253
[Close]
BLAST of mRNA_A-nodosum_M_contig1066.13.2 vs. uniprot
Match: A0A4T0UTE4_9NEIS (Class II glutamine amidotransferase n=2 Tax=Crenobacter TaxID=1654931 RepID=A0A4T0UTE4_9NEIS)

HSP 1 Score: 274 bits (701), Expect = 9.390e-85
Identity = 145/274 (52.92%), Postives = 178/274 (64.96%), Query Frame = 2 
Query:  743 MCQLMGMQANTPTDFSFSFRGFRERGGRTGHHVDGWGLAFFQGRGFRLFCDSLPSALSPVANLICAYPIKSRTVIAHVRMATQGEVRMENVHPFTRELWGSYWIFAHNGDVPSAKNAATNGLYATKSKQYIPVGDTDSEKAFCYFLNQLLDAFPDGRPNMADVYVELERIWKRLCRDSGVIFNFLLGQNGETLFAGCWPGARPGSKTWNTLYYTIREFPFSTCQLVDDDCEVDFTTVTSPNDRVSVIASSPLTTNEIWYEMARGDFLAFHGGQP 1564
            MCQL+GM  NTPTD  FSF GF  RGG T HH DGWG+AFF+G G R+F D  PS+ SPVA+L+  YPIKS  VIAH+R ATQGE+R+EN HPF RE+WG YWIFAHNGD+ S    A  G +      Y PVG TDSE+AFC+ L  L   +    P    +Y EL+R+ + + R  GV FNF+L  NGE LFA C             L++ +R+ PF+T  LVDDD  VDF TVT+PNDRV+VIA+ PLT NE W  +A G+ + F  G P
Sbjct:    1 MCQLLGMNCNTPTDILFSFEGFHRRGGLTDHHADGWGIAFFEGPGVRVFLDDKPSSESPVADLVRRYPIKSENVIAHIRKATQGEIRLENCHPFVREMWGRYWIFAHNGDLKSFAPPA--GHF------YRPVGGTDSERAFCHILETLRHKW-GAMPETGALYAELDRLAREI-RAFGV-FNFMLS-NGELLFAHC----------STHLHFIVRQAPFNTAHLVDDDVSVDFATVTTPNDRVAVIATQPLTDNEAWTALAPGELVLFRDGTP 252
[Close]
BLAST of mRNA_A-nodosum_M_contig1066.13.2 vs. uniprot
Match: A0A1Q4RSI1_9CYAN (Class II glutamine amidotransferase n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A1Q4RSI1_9CYAN)

HSP 1 Score: 273 bits (698), Expect = 2.710e-84
Identity = 136/275 (49.45%), Postives = 176/275 (64.00%), Query Frame = 2 
Query:  743 MCQLMGMQANTPTDFSFSFRGFRERGGRTGHHVDGWGLAFFQGRGFRLFCDSLPSALSPVANLICAYPIKSRTVIAHVRMATQGEVRMENVHPFTRELWGSYWIFAHNGDVPSAKNAATNGLYATKSKQYIPVGDTDSEKAFCYFLNQLLDAFPDGRPNMADVYVELERIWKRLCRDSGVIFNFLLGQNGETLFAGCWPGARPGSKTWNTLYYTIREFPFSTCQLVDDDCEVDFTTVTSPNDRVSVIASSPLTTNEIWYEMARGDFLAFHGGQPF 1567
            MCQL+GM  N PTD  FSF GF  RGG+T  H DGWG+AFF+G+G R+F D+  S  SP+A L+ +YPI S  VIAH+R ATQGE+ +EN HPF RELWG YW+FAHNGD+P        G  +  S  YI VG+TDSEKAFC  L  L  AFP+GRP +  +Y  LE I   + +    IFN+LL  +G+  FA C             L Y +R+ PF+   L+D+D  VDF  +T+P+DRV+VIA++PLT NE+W ++  G  LAF  G P+
Sbjct:    1 MCQLLGMNCNVPTDICFSFEGFCARGGKTDDHKDGWGIAFFEGKGCRIFLDAKSSVASPIAELVRSYPIHSTHVIAHIRKATQGEINLENCHPFRRELWGRYWVFAHNGDLP--------GFESNSSSFYIAVGNTDSEKAFCLILETLRKAFPEGRPPIEKLYPVLENITLNIAKQG--IFNYLLS-DGDYFFAHC----------STKLCYIVRQAPFAGAHLIDEDITVDFNELTTPDDRVAVIATTPLTDNEVWTQIQPGQLLAFRDGNPY 254
[Close]
BLAST of mRNA_A-nodosum_M_contig1066.13.2 vs. uniprot
Match: E0UBT8_GLOV7 (Glutamine amidotransferase class-II n=1 Tax=Gloeothece verrucosa (strain PCC 7822) TaxID=497965 RepID=E0UBT8_GLOV7)

HSP 1 Score: 271 bits (694), Expect = 1.070e-83
Identity = 138/274 (50.36%), Postives = 179/274 (65.33%), Query Frame = 2 
Query:  743 MCQLMGMQANTPTDFSFSFRGFRERGGRTGHHVDGWGLAFFQGRGFRLFCDSLPSALSPVANLICAYPIKSRTVIAHVRMATQGEVRMENVHPFTRELWGSYWIFAHNGDVPSAKNAATNGLYATKSKQYIPVGDTDSEKAFCYFLNQLLDAFPDGRPNMADVYVELERIWKRLCRDSGVIFNFLLGQNGETLFAGCWPGARPGSKTWNTLYYTIREFPFSTCQLVDDDCEVDFTTVTSPNDRVSVIASSPLTTNEIWYEMARGDFLAFHGGQP 1564
            MCQL+GM  N PTD  FSF GF  RGG+T  H DGWG+AFF+G+  R+F D+ PSA+SP+A+L+  YPIKS  VIAH+R ATQG++R+EN HPF RE+WG+YW+FAHNG++    N+   G Y        P+G TDSEKAFCY LN L  +F DG+P +  +Y  L++    L  + GV FN+LLG NGE LFA C             L+Y IR  PFS   L+D+D  VDF  +T P DRV+VIA++PLT NE+W  +  G+ + F  G P
Sbjct:    1 MCQLLGMNCNVPTDICFSFEGFCARGGKTDEHRDGWGIAFFEGKACRMFQDAKPSAISPIADLVKRYPIKSTNVIAHIRKATQGDIRLENCHPFRREMWGNYWVFAHNGNLIDM-NSELPGFYQ-------PIGQTDSEKAFCYLLNILRRSFADGKPTLTQLYSVLKQTTD-LMAEKGV-FNYLLG-NGEYLFAHC----------STHLHYIIRSSPFSQAHLIDEDLTVDFQALTHPTDRVAVIATTPLTDNEVWTPIQPGELIIFRDGAP 253
[Close]
BLAST of mRNA_A-nodosum_M_contig1066.13.2 vs. uniprot
Match: A0A7I8ECT6_9NEIS (Class II glutamine amidotransferase n=1 Tax=Jeongeupia sp. HS-3 TaxID=1009682 RepID=A0A7I8ECT6_9NEIS)

HSP 1 Score: 271 bits (692), Expect = 1.860e-83
Identity = 142/274 (51.82%), Postives = 172/274 (62.77%), Query Frame = 2 
Query:  743 MCQLMGMQANTPTDFSFSFRGFRERGGRTGHHVDGWGLAFFQGRGFRLFCDSLPSALSPVANLICAYPIKSRTVIAHVRMATQGEVRMENVHPFTRELWGSYWIFAHNGDVPSAKNAATNGLYATKSKQYIPVGDTDSEKAFCYFLNQLLDAFPDGRPNMADVYVELERIWKRLCRDSGVIFNFLLGQNGETLFAGCWPGARPGSKTWNTLYYTIREFPFSTCQLVDDDCEVDFTTVTSPNDRVSVIASSPLTTNEIWYEMARGDFLAFHGGQP 1564
            MCQL+GM  N PTD  FSF GF  RGG T HH DGWG+AFF+ RG RLF D LPS  SP+A L+ AYPIKSR VIAH+R ATQG V + N HPF RELWG YWIFAHNG++        +GL +    ++ PVGDTDSE+AFC+ L+ L   FP   P   ++Y  L+ +   L       FNFLL  NGE LFA C             L+Y IR  PFST  L D D  +DF++VT+P+DRV+VIA+ PLT NE W +M  G  L F  G+P
Sbjct:    1 MCQLLGMNCNVPTDIVFSFEGFHRRGGLTDHHADGWGIAFFEDRGCRLFLDYLPSITSPIAELVRAYPIKSRNVIAHIRKATQGTVNLANTHPFRRELWGQYWIFAHNGNL--------DGLPSLAGSRFQPVGDTDSEQAFCWLLDALARRFPSA-PARDELYAALKPLADELASRGS--FNFLLS-NGELLFARC----------ATDLHYIIRRAPFSTAHLSDADVSIDFSSVTTPDDRVAVIATQPLTDNETWIKMKSGQLLMFVDGEP 252
[Close]
BLAST of mRNA_A-nodosum_M_contig1066.13.2 vs. uniprot
Match: A0A0S3TJ76_9CYAN (Glutamine amidotransferase type-2 domain-containing protein n=14 Tax=Hapalosiphonaceae TaxID=1892263 RepID=A0A0S3TJ76_9CYAN)

HSP 1 Score: 271 bits (692), Expect = 2.050e-83
Identity = 136/278 (48.92%), Postives = 176/278 (63.31%), Query Frame = 2 
Query:  743 MCQLMGMQANTPTDFSFSFRGFRERGGRTGHHVDGWGLAFFQGRGFRLFCDSLPSALSPVANLICAYPIKSRTVIAHVRMATQGEVRMENVHPFTRELWGSYWIFAHNGDVPSAKNAATNGLYATKSKQYIPVGDTDSEKAFCYFLNQLLDAFPDGRPNMADVYVELERIWKRLCRDSGVIFNFLLGQNGETLFAGCWPGARPGSKTWNTLYYTIREFPFSTCQLVDDDCEVDFTTVTSPNDRVSVIASSPLTTNEIWYEMARGDFLAFHGGQPFSSA 1576
            MCQL+GM  NTPTD  FSF GF  RGG+T  H DGWG+AFF+G+G R+F D++PS  SP+A L+  YPI S  VIAH+R ATQGE+ +EN HPF RELWG YW+FAHNGD+P            T  + Y PVG+TDSEKAFC  L  +  +FP+GRP++  +Y  L +I  ++      IFN+LL  +GE  F+ C             L Y IR+ PF+   L+D D  VDF  +T P+DRV+VIA++PLT NE+W  +  G+ LAF  G P   A
Sbjct:    1 MCQLLGMNCNTPTDICFSFEGFAARGGKTDDHRDGWGIAFFEGKGCRMFIDAIPSISSPIAELVRCYPIHSTHVIAHIRKATQGEIALENCHPFRRELWGRYWVFAHNGDLPE--------FNPTGMQYYQPVGNTDSEKAFCLILETIRQSFPEGRPSLEKLYPVLRKITDKISELG--IFNYLLS-DGEYFFSHC----------STKLCYIIRQAPFAAAHLIDQDLTVDFRELTKPSDRVAVIATTPLTDNEVWTIIKPGELLAFQDGLPLQLA 257
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1066.13.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB53_ECTSI3.350e-17579.93Glutamine amidotransferase type-2 domain-containin... [more]
A0A7S1J865_9EUGL7.490e-10052.40Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S2UCJ0_9STRA6.070e-8954.06Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3PDV2_9STRA1.120e-8851.41Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A0T7BNP9_9CYAN1.640e-8550.36Glutamine amidotransferase n=1 Tax=Calothrix sp. 3... [more]
A0A4T0UTE4_9NEIS9.390e-8552.92Class II glutamine amidotransferase n=2 Tax=Crenob... [more]
A0A1Q4RSI1_9CYAN2.710e-8449.45Class II glutamine amidotransferase n=6 Tax=Cyanob... [more]
E0UBT8_GLOV71.070e-8350.36Glutamine amidotransferase class-II n=1 Tax=Gloeot... [more]
A0A7I8ECT6_9NEIS1.860e-8351.82Class II glutamine amidotransferase n=1 Tax=Jeonge... [more]
A0A0S3TJ76_9CYAN2.050e-8348.92Glutamine amidotransferase type-2 domain-containin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1066contigA-nodosum_M_contig1066:128968..139134 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LB53
PFAMsGATase_4
Model size1821
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue5.77e-181
EggNOG OGsCOG0121@1|root,2RXQT@2759|Eukaryota
Ec32 ortholog descriptionPutative glutamine amidotransferase type 2
Ec32 orthologEc-27_005170.1
DescriptionGlutamine amidotransferases class-II
Cds size891
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1066.13.2prot_A-nodosum_M_contig1066.13.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1066 129156..138392 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866454.1647434-UTR-A-nodosum_M_contig1066:128967..1291551680866454.1647434-UTR-A-nodosum_M_contig1066:128967..129155Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1066 128968..129155 -
1680866454.2467413-UTR-A-nodosum_M_contig1066:138392..1391341680866454.2467413-UTR-A-nodosum_M_contig1066:138392..139134Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1066 138393..139134 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866454.1800468-CDS-A-nodosum_M_contig1066:129155..1292781680866454.1800468-CDS-A-nodosum_M_contig1066:129155..129278Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1066 129156..129278 -
1680866454.1927972-CDS-A-nodosum_M_contig1066:130264..1303091680866454.1927972-CDS-A-nodosum_M_contig1066:130264..130309Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1066 130265..130309 -
1680866454.2028139-CDS-A-nodosum_M_contig1066:131060..1311971680866454.2028139-CDS-A-nodosum_M_contig1066:131060..131197Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1066 131061..131197 -
1680866454.213144-CDS-A-nodosum_M_contig1066:131728..1318481680866454.213144-CDS-A-nodosum_M_contig1066:131728..131848Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1066 131729..131848 -
1680866454.2213233-CDS-A-nodosum_M_contig1066:132333..1324971680866454.2213233-CDS-A-nodosum_M_contig1066:132333..132497Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1066 132334..132497 -
1680866454.2295375-CDS-A-nodosum_M_contig1066:132863..1331411680866454.2295375-CDS-A-nodosum_M_contig1066:132863..133141Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1066 132864..133141 -
1680866454.2379277-CDS-A-nodosum_M_contig1066:138368..1383921680866454.2379277-CDS-A-nodosum_M_contig1066:138368..138392Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1066 138369..138392 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1066.13.2

>prot_A-nodosum_M_contig1066.13.2 ID=prot_A-nodosum_M_contig1066.13.2|Name=mRNA_A-nodosum_M_contig1066.13.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=297bp
MCQLMGMQANTPTDFSFSFRGFRERGGRTGHHVDGWGLAFFQGRGFRLFC
DSLPSALSPVANLICAYPIKSRTVIAHVRMATQGEVRMENVHPFTRELWG
SYWIFAHNGDVPSAKNAATNGLYATKSKQYIPVGDTDSEKAFCYFLNQLL
DAFPDGRPNMADVYVELERIWKRLCRDSGVIFNFLLGQNGETLFAGCWPG
ARPGSKTWNTLYYTIREFPFSTCQLVDDDCEVDFTTVTSPNDRVSVIASS
PLTTNEIWYEMARGDFLAFHGGQPFSSAEEFRFHLKTKRTSPLSSP*
back to top

mRNA from alignment at A-nodosum_M_contig1066:128968..139134-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1066.13.2 ID=mRNA_A-nodosum_M_contig1066.13.2|Name=mRNA_A-nodosum_M_contig1066.13.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=10167bp|location=Sequence derived from alignment at A-nodosum_M_contig1066:128968..139134- (Ascophyllum nodosum dioecious)
GTTGAATTTTGAACGGTCTGCTGAGCCATACACCAGGACACGGTACTATG
ACCAAGCGCCAGCTATGAACTGGGACCACGCGGTCAGCTGGGGTAGGGGG
GTTTGGGTTAGCGTTAGCGATATTGGTCGGGTTGGGTTGAGTTGAATTTT
GAATTCGCCACCGCACAGCGCACAGACTCTGCTCCTGGCGTTGAGACAAA
ACCGACCCAGAGACGCACAAAAAAACAAGCGTTGAGACAAAACCGACCCA
GATACGCACAAAAAAACAAAAAGGGGACGCTGCCGGTGAATATCCCGGGG
TTTTCATTGGAAACGTTTTTGGTGGGAGGTTCTAACTTACCCACCTACGT
GGGAAAATAGCCGCTCCCGCTTTTTCGTGGCGAATGTGCGACATTTTTTC
CGTTTGTTTTGAGCTCTAATCCCTGTCCAAATCAGGTCTCAACGGATGGT
TTATGCAAGGTTCATACTGCCCTTGGGTCCTCGGACTCAAAAAAATAAGT
CTTAAAATTAGACCAATCAAGTTGCTGTAGTATCTGACTCCGAACTAATT
TACGTAATTCACAATTCGCTCTCTAGAAGTTCTCGAGACGTGACCAATAA
TAAAAAGCACGTATTTCTCAGCACCTAGACCTTCTGAGCATCCCCCAGTT
GCTTTTATTCTGCAGCCTGTGCACCCCTATCGCTGTCGAGGTGTGAACAG
GATCTGGTAGAAATCTCCGTGGGGTTATTGCACTGGCAAGATATGTGCCA
ACTCATGGGAATGCAGGTGTGTACGATGCTGCACCTACACAAAAGTTATT
ACCTGTCGCAGATGCAGTGCAGTTTCATTAGAGTTACTGTAAGCTCTACT
CGTAGTCAAGCTCCAGACTAAAAAAGCTGTATATTATTACCTCTGTGACT
TTCCGGTATTGGTTGGTTGACCAGCTGTAAAGAGTGCTGAACTTGCATCG
CGATAAAAAAATTACAAGGCGAGAACCGGGGAGAGATGAAAATATCCTTC
GTGACCACAGGTAGGCAGGATGCCAGCATTGCAGTAGGTGAGATTGGTAA
CCTATAGCACGTTGAGGCTCATCGGCCTTTAGTGAGATACAAACAAACAA
AAAACTGCTTGACACTAGTTACTACCGGTACTTCGTATAACGTTAGGTTG
TTCCGATATTATACTCTGTTGATCCTGTCGTTGCAGACCACTCAACAGTT
AATAGGATTAATCCTAGTCTAGTGCAGAAATCGAGAGTTCGATTCTTGAC
AAAATCAAGTCTTTTAGCTTCTGTAGTAATAGTAATAGTAATAGTAGCGG
AAAGCGTGACAACGGGAGTGAGTAAAATGCAACCATTGGTTAACGAGGTG
TTAAACTGCTGAACTTGCATCGCTATAAAAAATCGCAGGCGAGGACCACG
GAGAGATGTAAAGATAGATCATTAGTTATCACGAGCAGGATGCCAACGTC
TCAGTATGTATGGTCATTACATATAGCAGAGTATGGATCAACCGGGTAAG
GTTGCCAATCCTACTCGTGGTCAGCTGAACAGGGAAAATGGATATTTCCC
TGTCCGCATTCGCGCCTGATAATTTGGTCTCGCGAGACGGATTCTGCAGT
CACGTCCCGCGTCAGCCTGCTCATTCTCCATGCTCAGGCTGAATCTGGTG
CTTACTCACGGGATTCCTCCCGAGTTCCGCAGCGGCGTCCATTTATTCAT
ATCTAAGCCGCCATACGCCATCGGGTCAGTCCCGAGTTTATCGGGTCACG
CAATAATTGCGCACCGATGGCGTTCACTGCCGAGAGACCGCCGGCACAAG
GCCAGTAGTCCTCAAGATACTTCCAGTAACGAGTGCTGCCATTTTGCAGG
TCACCATGGACCAATTCATGTGCGCCTCTCTTTTCCCACGCCAACTATTG
GTATGAAGTGGGCATGTTGATAGATAGGTGGGATTGGTAATCTAGCACGT
TGAGGCCCATCGGCCGCAAGTGAGATACAAACAACAACAAAAATGTAGAC
CCTACCCTATTAATATTATCATTGAGAAATATATACGCCGGTACTTTCAA
CATGCCCACTTCATACCAATAGCGGGTGAGGGAAAGAGAGGCGCATATTA
ATTGGTCCATGGTGACCTGCCGAGGTAGCACTCGTTCAGAACTACCTTGA
GGTTTACTGGCCCTGTGCCGGCGGACTCTCGGCAGTGAACGCCTTTGGTG
CGCAATTGCGTGACCCGATAAACTCGGAACTGACCCGATGGCGTATGGCG
GTTTAAATATGAATGAATGGGCGCCGCCGCGGAACTCGGGAGGAATCCCG
TGAGTAAGCACCAGATTAAGCCTGAGTATGGAGAGGAACAGGCTGACGCG
GGACGGGACTGCCAAACCCGTCTAGCGAGACCAAATTCTCAGGCGCGAAC
GCGGACAGAGAAATATTGATTTTCCCTGTTCAGCTGACCACGAGCAGGAT
TGGCAACCTCACCCAGTTGATCCATACTCCTGCTATATGTGGTAACCATA
CATACATACATACATATACATATTCATGCAAAGACGCCGATACTTTCAAC
ATGCCCACTTCATACCAATAGTGGGTGTGGGAAAGAGAGGCGCATATTAA
TTGGTCCATGGTGACCTGCAAAGGCAGCACCCGTTACTGGAACTACCTTG
AGGTTTATTGGCCCTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGT
ACTCATTTGCGTGACCCGATAAACTCGGGACTGACCCGATTGCGTATGGC
GGTTTAAGTAAATAAATGGACGCCGCCGCAGAAATCGGGAGGAATTCCGT
AAGGAAGCGCCAGATTCAGCCTGAGTATGGAAATGAGCAGGCTGACGCGG
GACGGGACAGCCGAACCCGTCTCACGAGACCAAATTTTCAGGATTGAACG
CGAACGGGGAAATATTCATTTTCCCTGTTCAGCTGACCACGAGCAAGATT
GGCAACCTTACGCGGTTGATCCTTGTCTTGCCATATGTGTTGACATACGT
ACATAAATATATACATACATATATACTTTGGAGCATGCTTTACGCTGACG
ATGCCGGGGTCGTATCGCAATCCCCCGAGCAGCTGAGGAAGATGATGGGG
GTAGTCGTGGTCGTGTGCGCGGCGTTTGGCCTCAGCGTATCGAAGGCCAA
GACTGAGATCATGTGTTTACGCACGAAGGAGATGCCGGAGTCCACCGCCA
CATCAGCGTAGAGGCAGCGGGCCAGGTGTACAACCAAACGGACGAGTTCG
TATACCTCGGGAGGAACGTCAACCACAATGCTGACCTGTCCATCGAGGCC
AATCGGCGCATACGCAACGCATGGTGCAGCTTCCGGAAGTATACCCTCGA
ACTGTACGACCGACCGAGCGCTCCCCGCGAGCCCAAAATCCGGATGCTTA
GAGCCGAGGTACTCGAGACAATGCTGTACGGCTGCGTCACGTGGAGCCCG
CGCGTGTGCCACTACGACACGCTGCGCCAAGCCCATCACAGCTTCTTGAC
TCAATTCGCTGCATCGGTTGGCGAAAGAACGATCGCGCCGACCACCCGAT
TTTCTATCTGGACACGCTTATCAAGACGGGAAGTGAAAGCATCGAGGCGA
CTTTACGCAGGAGGCGACTCTTGTTTGTGGGGCTTGTGGCGCGCATGGAG
GATACGAGACTGCCGAAGTGCGTGATGTTCGGAAAATTGGTAGGGAGGGC
GGGCTGCGTGGGGGGCCAGGAAAAAGAGTGGATGGGGTGTTTCCTGGACG
ATCTCAGAGCCTTCGGCATCAACGCCGATCAGTGGACGACTGTAGCCCAG
GACGAGGGAGAATGGCGCAGAATGCCGGAACAAGGGGTGCAACGTTTCAT
GGCGAAATGGATCGCTGCAGAGAAAGCCAGGGCTGGACTACGGCATACAT
AAGTATGCCCGAACGTAACGGGAAGAACCAAGGAGATGATAGCCCAAAGC
AAGCGGACTCGTGCTGGTTCGCTCGCCATAGTTGATTAGCCACAAATGGC
GCGAACTTGTATCCTCCAGGCGGATGTCGCATTGTCTTTCTCTGGTGTTT
CGTTTGTTTTGTTTTCTTTCCTTACCACTGTTTGTCTGCGTCCTTTTTTC
GTTTTTCTTTCTTCCTTTTTTTGTTTCTTTGGAGATATGTCGCTTTTTTC
CGAGTGTTTTTGTACCATTACCGTTTTCTCTTTGTATGGACTATAGAGTA
CTAGTACAATATTACTATTATTATTACCATTACTATTACTGTTACTATTA
CTATTACTATTACTGTTACTATTACTATTACTGTTACTATTACTATTACT
ATTACTATTACTATTACCATCGTTTTCTCTTTGTATGGACTATAGAGTAC
TAGTACAATATTACTATTATTATTACCATTACTATTACTGTTACTATTAC
TATTACTATTACTGTTACTATTACTATTACTGTTACTATTACTGTTACTA
TTACTATTACTGTTACTATTACTATTACTATTACTATTACTATTACTATT
ACTATTACTATTACTATTACTACTACTATTACTACTACTATTACTATTAC
TATTACTATATTACTATTACCGTCGTAGGTTTTCCCCTTTCGAGTGGTGT
TTTTTTACCTTGTGACCACGGGCTGGATTTTTGAGATCAGCTTTTGCCCA
AAGTTCAGGAGGGTATGAATAGAGCTTCTACAACAGTCAGTGGCCTATCA
GGCCTTAAAAAAAAGTCGACATTGCTAGCCAGGATCTTTCTATCCTCCTT
AACAAACAGTTTTATGAAACACGTTGTAGCTAACGCCAGCTTCCTGATCC
CAAGTCCTCGTCGCTTCAGCTAGAAACCGATACGCTTATCTTGTCTATTT
GTAAAATTGGCTATTGATGGGGGGATCTTCCCCTATGGGGCAACTAGAGC
TATCGGCTATTGGTAGAGCGACGTCATGAAATGTGAAATCTTTTACGTGG
AACCAATAAAGAGTAGGAGCAGTTGCCACGTCTGCCAAGCCCTTCTGACG
GTGGTTGGTAACTTGTAGTGATGTTGTGTTATGTGTGAAGATGAAATTTT
GATTTCGCGGTGGCAGAAGGAGAAAATCGCGTGTTGTGTGAAGATCGAGG
TCATCTCTATAAGTCACATACTATACATACGATCCATACTATACATAGTA
TATTATTGTTCCTTCGTAGTTTTACTGAATGCGTGCCGTTCCATCAGGGA
TCCGAAAACGCCGCGCCATCGTTAGACATGATTAGACACGTCATTAGGCA
CGTCATTGGACACGTAATTAGACACGTCATTGGAGACGTCATTAGACACT
CAAAACACGAGGTAAAAATGACGGGGCTCGTGTCATTATTATTATTCGAA
CCAGGCGGTTTCTATTTAGACTAATAATATGTCAAGAAAACAGCGAGCAG
GTATAACATTAATGGCACGTTACGGTGTTAACAGTAGAGTACGTGATACG
TGATACGTGATACGTTGATACATGGTTTCGACGGTAGTTAAACGTTGATA
CATGGTTTCAATGGTAGTTAAACGTTGATACATGGTTTCGTCGCCCGAGT
GGTCTAGTAGGTAAGCTGCACATCTGCTAGTACGGAAGTCGTGAGTTCGA
TTCTTACCAAAGTAGGATTTGTGTTCTTTCTTTCGTAACGGAAAGCGTGG
GAACGTGAGTAAGTAAAATTCAACCCTTGGTTGACGAGTTGTAAGAGTGC
TAAACTTGCATCGCGTTAAAAAAAATGTAAGGCCTGAACCGGGGAGAGAT
GGGAAGATCCTTTGTGACCACAGGCAGGATGGTAATGATGAGGTCCATCG
GCTATAGGTGAGATGAAAGAAAAGAAAAAGAAAAAGAATGGTAGTTAAAC
GTTGATACATGGTTTCAATGGTAGTTAATCATAATACATGTGTGAAGCGT
CGGGGCATCGAGAGAAAATGATGGCTCGTTGATGACCCCTTCTTCTTAAA
CCCCCGCCACTGATGACCCCTTGTCGTTATCCCTCCCGCGCAGGCGAATA
CGCCGACCGACTTTAGCTTCTCGTTCCGCGGCTTCCGCGAGCGTGGAGGC
AGGACAGGCCACCACGTTGACGGATGGGGCTTGGCTTTCTTCCAAGGGAG
AGGCTTCAGGCTTTTCTGCGATTCGCTCCCGAGCGCGCTCAGCCCCGTGG
CCAATCTCATCTGCGCGTATCCCATCAAGTCGCGAACGGTGATCGCGCAC
GTGAGGATGGCTACGCAGGGAGAGGTTCGGATGGAGAACGTGCATCCCTT
CACCCGCGAGCTTTGGGGGAGGTGATAAAGGGGGGACACGCGGTCGCGAT
TCGGCGTACGCCGTCAACCAAATCCATAATAATTTTCCCGCGCATCGCAC
GTTTAGAGCTGCATTTTTTATTTTTTTTCGCGACGTGTGCTGTGATCCTT
GCTCAGGCGAGGAGATCGCTTCGCCCTCCGTCGAGGAATGGCGCGTGCTC
TTCGCGTTCGGTGTTTCGCCATGCCAACCATCCTCCTGCTTGAGAACTAT
ACATTCCAGGCCGGCCGCGCAAGCGACCCACTCCGCATGCGTGCGTTGCT
GTCAAGTAGTACTGCAGACTATTAATATTTTAATCAGATTAATAAGAATC
ATGCCTTTTCCCTCCAAACCCCACCCGAGGAACGCAGCTACTGGATTTTC
GCGCACAACGGAGACGTGCCTTCCGCGAAGAACGCGGCGACGAACGGGCT
CTATGCCACCAAGAGCAAGCAGTACATTCCCGTGGGAGACACCGACAGCG
AGAAGGCGTTCTGCTACTTCCTGAACCAACTGCTCGACGCCTTTCCGGAC
GGTACGCCGACAGACGCGTCTCTTGTCTTCGGCGCCCGCGGCGTTTCTGT
CATCGGAGGATGACGAAATAGAAATTTGTTGCAGGCCAGAGGGGTGATGA
GTCCACGAGAAGCGCGGAGTTTGTTTTTTTTCCTACGCGATTCGCAAAAG
CATATGCGCGCCTGACCGTCGTGCTGTTTTTGACGAGACGTAGAGTCCGC
GGGACGATGTGGAGTTTCAGGTCTCGATCATCTTCCGTCGCTATCTGCGT
CTCAAAGAGGTGTCTTCTCTCACCCACGTTCTGGTGGCTTGACCCTTTGA
CCTTCGCACCTGTTCTGAGACCCACGATAATTGTTGGGCACCAATGCCAT
TTGATCGGTCCACGACAGGCTATTCTGTACCACCGTAGTAGTTCATTTGA
AAGGACAGCACGCTGAAACCTTCAATCCACAACAACAACAACAACAACAA
CAACAACCCCGACGGCAAATGTTATCCACTTCCAAGGTCGCCCAAATATG
GCGGATGTGTACGTGGAATTGGAACGGATCTGGAAGCGACTGTGCCGCGA
TAGCGGGGTCATCTTTAACTTTCTGCTGGGACAGAACGGGGAAACTCTCT
TCGCAGGTGCTGATAGACTATGATATAATAGTAATAGTAATAGCACAGCA
CGATCTTAGACTATGATATAATCGTTGTCATGAGCTACAATATACCGTTT
TCCTCATGAGCTTTCTGGGTAAAGGTAAAGCGATCGATCATACCACCGCA
GGGAACACGGCGTGCCTCAGGCAGTGTTTAAATTCTGAAGACCGGAGAGT
GCTGCCTGAGCCTGTGTTGGACGGGTTCTTCCCCCGGCTGCATCTCCTGT
GTTGATACCGCTATAAAATACCGATCCGTTAGTACACGCACGTTCGTAGG
GACAGTTTTCTTCCCCTGTGTTGTTTTGTTATTGTGTTATTTCTTGGAAG
GCGTGCACGGAGGTTACACACGATGGTTCAAACGTAGATATGAAGGGCCG
TTTATGACAGATGTCCCACTTTCCGCCATGACAACGTCGTTACACACTCG
ACGAGCATGGCATGGCGTCTGCGATGGGGCACTTGGTCGGGATGGGGGTA
TTCACTGGTGTGCGCATCGTGACACCCTGCCGGGCAGGTTGCTGGCCTGG
AGCGCGCCCTGGTTCCAAGACTTGGAACACCCTGTACTACACGATCCGGG
AGTTTCCTTTCTCCACCTGCCAGCTGGTGGACGATGACTGCGAGGTGGAT
TTTACGACCGTCACGTCGCCCAACGTGAGTTTGCGGAGGTTATGAGCACG
TCGTTTGCGTTCCTTTGGAAGCGAAGATGTTTATACCTGAATATTCGCTA
CGCTCACGACCCCGAAAAACGCTTACTCGGGGATAACTTGAAAGACGGTG
GATCCGTCACACTTGATATTGCAGTTCGGATTTGAAGGTTGCCACTCGGG
TGAGAGCTTTGAACGAGCCCTACCCATCCCTCTGAAACGCTTCTATGACA
ATACTGTCTCGTGGAAGAGGATCGTTGGCGTAGAACGGGGAGCAACCGGC
ACGGGCGGGGTATGAACGGCGCGCTTAGCAATTTGAGAATGCACGTCCTG
TCCCTAGATTGCTCACACGATTGTGCGGCGGGAGGTTGGCTGGTGATTAA
CAAGGCGGCCGAAGTCACAATCTGATCATCAAACCATCTCACGTTGCGCA
CCTGCACAGCTCTCTCTCTCTCTCTCTCTCAACCGACTGGTTCCTCCTTT
GTATAATAGTTCAGCCAGTATACTGAAATTTTCCCGGGCTACAGTAGTGA
CAAGAGGCTAGAGTGCCTGTGCGCTGAGGGCGTGGCGTGATGTAGACGCG
TCGCATCTTAACCTACCCCTCCCTCCCTCCGTCCCTCCGTCCCATTGGTC
TCGTCTCTGCACACATGCATGCATACATACATACCTGGTACATACATACA
TACTACATGACGGCTCGATGGCGACTAACGGTGTTGTTTCCTGTGGATGG
GGACTAACGGTGATGTAACCGTCAGGACCGAGTGTCGGTTATTGCGTCTT
CTCCGCTCACGACTAATGAGGTGAAGAAAAAACAAAACACCCTGCATCCC
TCGCGTTTCAACCGTTTGGAAGCCACGGCCATCGCTTTGCGCAGCCACCG
TTAACATTATAACATGGCATACCGTATCGTATCGTATTATTAGGCCATAT
CATGGCGTGCATGGTGTTATCGCTGTAGATCACATCACATACGTGATATT
ATTAAGTCAAATGACACGCATGATATTGTTAGGGCCGTATGACATGCATG
ATACTATTACTGTAGATCATGTCACATCATACAGAACGTGACATTGTGAA
ATCGAATGGCATGCATGATATTATTAGATCATATGACATGCATTGTATTG
TTACTGGAGATCGTATCACATACATTATATTATGAAATCAAATGACATGC
ATGATATTATTACTGTAATCGTATCACATACATAATGTCATTAAATTAAA
TGACATGCATGATATTATTACTGTAGATCATATCACATACATTATATTAT
TAAATCAAATGACATGTATGATATTATTAGATCATTAGATATTATCACAT
ACACGATATTATCAAATCAAATGACATGCATGATATTATTAGGCCATATG
ACATGCATGATATCATTACTGTAGACCATATCACGTACACGATATTATCA
AATCAAATGACATGCATGATATTATTAGGCCATGTGACATGCATGATATT
ATCAGATCATATCACATACATGATATTACTAAATCAAATGGCATGCATCA
TATTAATATTAATAGATCACATCACGTACATCAGGAGAGCGGAAACAAAA
GCACGTCAAATGTAAAAAAAAAAAAAAAAACGCCGTTTGGCCAATAATGT
ATGCCATGCTATCAATACTAATACAGTAGTAATACTGTTGTCGCCGTGCC
GTAGTTCATCCTGTAAGTGTTGTCATCCCATTTACTGCATTCTGGATATC
AGACTTGGATTTTAATTGTTGTACGTCGCCCCCCCAAACCCCCCTGCCCC
CCTTAGATTTGGTACGAGATGGCTAGGGGCGATTTCTTGGCGTTCCACGG
AGGGCAACCATTCTCGAGCGCCGAGGAGTTCCGCTTTCATCTCAAGACCA
AGAGAACCAGCCCTCTGTCTTCTCCTTAGAGAGACCCGTAGCCAATCACG
ATACCCCTTGAAATAATTACTGCTCGTTCATTTTTTCAGGAACGCATCGA
AAGCTCTTCTAGAGCCACAGTACATCCCATCCTACAGTGGTATAGTAATA
CATGATATGTACCACCTACTAAACGTTTTGACATTTTCCCCTCTGACTGG
GGAATGCTCAGAAGGTC
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig1066:128968..139134-

>mRNA_A-nodosum_M_contig1066.13.2 ID=mRNA_A-nodosum_M_contig1066.13.2|Name=mRNA_A-nodosum_M_contig1066.13.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=891bp|location=Sequence derived from alignment at A-nodosum_M_contig1066:128968..139134- (Ascophyllum nodosum dioecious)
ATGTGCCAACTCATGGGAATGCAGGCGAATACGCCGACCGACTTTAGCTT
CTCGTTCCGCGGCTTCCGCGAGCGTGGAGGCAGGACAGGCCACCACGTTG
ACGGATGGGGCTTGGCTTTCTTCCAAGGGAGAGGCTTCAGGCTTTTCTGC
GATTCGCTCCCGAGCGCGCTCAGCCCCGTGGCCAATCTCATCTGCGCGTA
TCCCATCAAGTCGCGAACGGTGATCGCGCACGTGAGGATGGCTACGCAGG
GAGAGGTTCGGATGGAGAACGTGCATCCCTTCACCCGCGAGCTTTGGGGG
AGCTACTGGATTTTCGCGCACAACGGAGACGTGCCTTCCGCGAAGAACGC
GGCGACGAACGGGCTCTATGCCACCAAGAGCAAGCAGTACATTCCCGTGG
GAGACACCGACAGCGAGAAGGCGTTCTGCTACTTCCTGAACCAACTGCTC
GACGCCTTTCCGGACGGTCGCCCAAATATGGCGGATGTGTACGTGGAATT
GGAACGGATCTGGAAGCGACTGTGCCGCGATAGCGGGGTCATCTTTAACT
TTCTGCTGGGACAGAACGGGGAAACTCTCTTCGCAGGTTGCTGGCCTGGA
GCGCGCCCTGGTTCCAAGACTTGGAACACCCTGTACTACACGATCCGGGA
GTTTCCTTTCTCCACCTGCCAGCTGGTGGACGATGACTGCGAGGTGGATT
TTACGACCGTCACGTCGCCCAACGACCGAGTGTCGGTTATTGCGTCTTCT
CCGCTCACGACTAATGAGATTTGGTACGAGATGGCTAGGGGCGATTTCTT
GGCGTTCCACGGAGGGCAACCATTCTCGAGCGCCGAGGAGTTCCGCTTTC
ATCTCAAGACCAAGAGAACCAGCCCTCTGTCTTCTCCTTAG
back to top