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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2347 |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Cds size | 1347 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866450.550744-UTR-A-nodosum_M_contig1065:24878..25608 | 1680866450.550744-UTR-A-nodosum_M_contig1065:24878..25608 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1065 24879..25608 - |
| 1680866450.6084492-UTR-A-nodosum_M_contig1065:31788..32058 | 1680866450.6084492-UTR-A-nodosum_M_contig1065:31788..32058 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1065 31789..32058 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866450.5590332-CDS-A-nodosum_M_contig1065:25608..25773 | 1680866450.5590332-CDS-A-nodosum_M_contig1065:25608..25773 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1065 25609..25773 - |
| 1680866450.566912-CDS-A-nodosum_M_contig1065:26177..26301 | 1680866450.566912-CDS-A-nodosum_M_contig1065:26177..26301 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1065 26178..26301 - |
| 1680866450.5750997-CDS-A-nodosum_M_contig1065:26484..26966 | 1680866450.5750997-CDS-A-nodosum_M_contig1065:26484..26966 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1065 26485..26966 - |
| 1680866450.5839238-CDS-A-nodosum_M_contig1065:27353..27507 | 1680866450.5839238-CDS-A-nodosum_M_contig1065:27353..27507 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1065 27354..27507 - |
| 1680866450.599377-CDS-A-nodosum_M_contig1065:31366..31788 | 1680866450.599377-CDS-A-nodosum_M_contig1065:31366..31788 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1065 31367..31788 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1065.6.2 >prot_A-nodosum_M_contig1065.6.2 ID=prot_A-nodosum_M_contig1065.6.2|Name=mRNA_A-nodosum_M_contig1065.6.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=449bp
MLMPYVWIWLQIAQLHLLLPNRWKVSLHCREGSTLSAHANARVRCIFRSS
RVFFRPFEFYTVLFLRQIFTPAFVNDSNTVLNHGMAATLLYANRKLTNTL
VFLMSPRGPCGRNALLQRRFRSAISRNFFRPGLDVAFGIKICCWWLVVLV
LATKLMSSPVDHVGDVGTTPPAGATPSAEATATADINTPVPGLPAALNRV
LGGVLSVTSANTYTRKATAKRKYDTIRVATEKAPARPLNVQSIESIVDGT
CFPTRKRSAPGSARTCCGRGCNLTFASHDGSFGRVRRTVPPAGIGQQRAR
KIWVRECIQDDRSLMLSDHAGFSCVVCQLFFVAVTGCSKKLIRSAMELGD
PGMKPRHKVNALSQVIMAFILELASRWEFQPDSQDIHMAFPSKVYVYQMF
LASVACQSLAGAVSYSYFVLMWNEHCPHVRLKKVEEGGRASHPKAKVG* back to topmRNA from alignment at A-nodosum_M_contig1065:24879..32058- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1065.6.2 ID=mRNA_A-nodosum_M_contig1065.6.2|Name=mRNA_A-nodosum_M_contig1065.6.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7180bp|location=Sequence derived from alignment at A-nodosum_M_contig1065:24879..32058- (Ascophyllum nodosum dioecious)
GTTTACTTGTACTCGGGCTCTACATACAGTATCACTCAATGTGACACCCT
TGATTGCTTCGCCTTTCGAGCCTGATATTCTCAATGTATTGCCGATTGCT
GGCCTCGCTGCCGCTACAGCCCAGCCTACTGCGCAATCGCAGTCTTCCAT
AAGTCAGAGATACACAATCGCGTTTGCGAGCCCTCAGAAGCCTACTCTAA
TTTAGATAGCTGCAAACTGGGTGCTCGTCAAGGAATCTGTTAATCCAGTA
TTTTTAGACTCTCTTTTCGGATGCTGATGCCTTACGTTTGGATTTGGCTA
CAAATAGCACAACTACACCTGTTACTCCCGAATCGTTGGAAGGTGTCTCT
CCATTGTCGAGAGGGCTCTACGCTATCAGCGCACGCGAATGCTCGCGTAA
GGTGCATATTTCGCTCTTCCCGCGTCTTTTTCCGCCCGTTCGAGTTTTAT
ACTGTACTATTTTTACGGCAGATTTTTACTCCTGCTTTCGTAAATGATAG
TAATACTGTACTGAACCACGGAATGGCTGCGACACTGCTTTATGCAAACC
GAAAGCTGACCAATACTCTCGTCTTCCTTATGTCGCCGCGAGGACCCTGC
GGGCGCAATGCGTTGCTACAGCGGCGGTTTCGGTCAGCGATTTCTCGCAA
TTTCTTCCGCCCTGGGCTGGACGTGGCTTTCGGGATAAAAATGCAAGTAT
AACTGCGCGCGGATCTCGCGTCTCTATCTCGCCTCCGAATTCCGGTCGCT
CGTCATTGCGACCCCCTGCGACTTGGAATTTTTGCGCCCCGGCGTCTGCG
TTCGTTCCAGCCTTGAAAAAAATATAATAGTACGACCCAGGCTGCGAGTG
TTCTGTACTCCCACGTTTCCGCGCGGATTTTGTCGCGAAAATACAACATG
CGATGTGTTCCGAAGGTGCAATCGTTGCGGTTCCCTCCTACACTGATAGG
GCTACAGTTATACAGCTGTTAACACATTCAATGCGTCACGCATTGTCTGA
TTCTATCTTCACGTCGCCAGTCCCAATGGTAGCGTGATCATGGCCTCACC
CACCTGGGTCTCCGGATGGGCCATTGACACCATCACCGGAAATTGCACTT
GAAATGGTACAGATTCGTATCGCACGGCGAAATTCAATGCTGATGCCAAC
TTTGCCCCCGGGTGATTTAGCGACTAGGGATAAACCCCATGAATCGCTTA
CCGCAATGTGAACCACATTTGCAAATTTACAGTACTGAGCCTCGCTCACA
GGCGTCGCCCGAGCTCTCATGCTCCCTCGACTATAACCAGTCCACTTATT
CCAACCGCTCCGCTGTAGCGTAAAAACAGTTAGCGATCAGGGAATAGACT
CCACGACTCGCTTACCGAAATTTGAGCCACATTTGCAAATTTACAGTACT
AAGCGTCGACCGAGCTCTCATGCTCCCTCGACTGTAACCAGTCCACTTAC
TCCAATCGCTCCGCTGTGGCGTAAAAACAGTTTGAAACGGTCAGGGATAG
ACTTGACAACTCGCTTACCGAAATGTTAACCACATTTGCAAATTTACAGT
ACTAAGCCTCGCCCACAGGCGTCGCCCGAGCTCTCATGCTCCCTCGACTA
TAACCAGTCCACTTACTCCAACCACTCCGCTGTAGCGTAAAAACAGTTAA
CGATCAGAGATAGACTCTATGACTCGCTTACCGAAATGTGAACCATGTTT
TACAAATTTACAGCACTTAACCTCGCCCACAATAAGGCGGCGCTCGAGCT
CTCATGCTCTCTTGGCTGTCACCAATCAGATGACCTCACTCGCTCCACTG
CAGTAAAACAGTGTTTGGTAACTAGGGAAAAACCCTACGACTAGCTTGCA
GCAACATGGACTGCGTCTGAAAAATTACAGCATTATATCTCGCCTACTAT
AGATGGCGGCGCTTTTACGCCCCGGCCTGCGTACAGTATAGCGGCCGCTG
TTGCATATGTGACTCGACCGGACATAGCCTCCGACGGTGCCTTGCCCCTT
TTAAAAATAGTTTCTTCTTCCTCAACCCCGAATTCGGAACGCACGATTCT
GACGGATTCGTGTTTGGAACATGGGAACTACGCATGCGCCAATCGCGTCA
GCGCGTTTTTTACCGCAACCGCCTGGTTAATTGGCGCTACGCCTCCGAGA
GTGGCTGTTTCCGCCACTCTAATCGAGAACATAACTCGACATCTCCAGGT
ACAGGTAGCCCCGAGTCGTGCCGCTTCAGCGATTCCTCTTGCCATGAAAT
ATAGGCCTACATTCACAGGTTGTACAAACCCGAGCCACGCCAGCAAAGCG
CGCTCCAGGTACAGCCGACATCCACTCCTTGACAGTTCAGAGACGGTAAA
GCCTCATATGTAGCGCTGTCTACAGAACAACGCCACGGATGTGTTGATAC
AGTCGATACGTCAACACTAGTGACTCGAACTAAATATAACGAAACCCGCG
ACAAGTCCGTCCTTCCCATGTCTCCGACCCTGTCGTTTAGGTTGGAACTG
ATCCGCCGACCGATACGTCATTTCAGAGGTGTGGAGGGACGAACTCCCGA
GGCCTGGACATATGGGCTCTCTGTCCCCCTCTAGCTCGCCACTAGCACGG
AAGCGCTGCCCCGAGTTTGGATTCCCTGGTCTCAGCGCTAGCTTAATCGA
CTTGCCTGTTACTCACAAAGACCCCCCCCTGTCACGGCCACAATGATACC
GACTTTGACGTAAACGCACCCCTTCCGTGCCCGGTCTAGATTGATGTGTG
CCTCCAGTCTCGACCCACCCCAGCTTCGCAGACGGCAGTCGTTCGTGATA
CGCGAAAGCCGTACCGCGATTGTCCCTGCTGCGGTCATTCCGCCCCATTT
TCTGGACGCAGAAAATGCCTTTCCTGAGGGGAAAGAAGACCACTCCCATT
CATCATGGGCAAGCAGCTCAGAGACCCCAGTATGGATGCATAATACCAAT
GCTACTGCTGACGTGAGCCCTTGTAACGGTATTTACGCGATTATCGGCCA
GCGGACGCGGCCTGTCACCACCCCCTCCGTTCGGGCTTCGCAGCCTATAC
GCCCACACTTCGTACCACTTGACATGGCACACGGCGCCTATGATACATCG
CTCACATAGCGACGATGTCGTCTTATTGCTGCCCCCTTCGCCTTTCTCCC
AATGGACACCTTCACCATTCACGGTGGACCCAGTCGAATACGATTGTGCA
GAACAGCTCATGATGGCCTCGAATGCTCGCCTATTCGGCGACGACTTGGC
GCTTTCAGCAATACTTGCTACTGACGATCCCCGAGAACAAAAATGCCTCG
ACCGTCACACTTCGATCACGATTTCTGGCAGCAAGAATGCGAACATTTAG
TCCTCCGAGGCATACTGGCAAAATCCTCACAAAATGATGAGATACGCCTT
GCCCTTGGACACATTGACCAACGCCGCCTCCCCGAAGCGAGCCCCCATGA
TAAATTGTGGGGCATCGGCCTGAGTGCGTGCGACCCCGAGAGCACAAACG
CCTCGACAGACAGTGCGCCACTTTGGCGACGACCTCTTGCAAAAATAATT
GCGAACATGTTGTCCCGCGAGGCAACATTGCGACATTCTCACAAAAAGAT
GAGATACGCTTTGCCCTTGGACCTAATAGCGAACGCCGCCTCGCCAAAGC
TTGCCCCCATGATAAATTATGGTGCACCGGCCTGAGCGCTTGCAACCTGC
GCCTCTTCCCCTGGTACTTGGCTCTAGAACACGCGCGAGAAATCCTTCGT
GAGGAGACCATTACGCCACTCTGTAACCCCATATTGTCGAAAACCCAGTT
TCCATGGATCACACAAGCGTCGCTGTCGTGCGAGGTTGATCCGGTCGCTC
TCATTCACCTCGACCTCCTCGTGCTTAAGAGAAGCAACGTCAACAAGAAA
GAGATGTAAGAGAACTCCCGTGTCACCAGCATCAACCACCGTCGACTACC
GGAACCCTCTCGTGAGTACCCTGATCTGGTCATCTTAATATAGGTATGTA
TATGTATGTATGTATAGCCATAGACTGGCAAGAGTATGGATCAACTGGGT
CAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACAGGGAAAACGAATATTC
CCCTGTCCCCGTACGTGCTTGAGAATTCGGCCTCGCGAGACGGGTTCAGC
CGTCCCGTCCCGCGTCAGTCTGCTCATTCTACATACTCAGACTGAATCTA
GTGCTTACTCACGGGATTTCTCCCGATTTCCGCGCCGGCGTCCATATATA
TATATATTAAGTGGCATACACCATTGGGTCGGTGTCGACTAAATCGGGTC
ACGCAATTGCGTACCAATGATGTTCACTGCCGAGAGTCTGCCGGCACAGG
GTCAGTAGTCCTCAAGATAGTTCCAGTAACGGGTGCTGCGATTTTGCAGG
TCACCATGGACCAATTAATATGCCGAAATTTAAGAACTGGACCAACACGG
TTGTGATGTGCAGCAGTAGAGCAGTTGCCGTGCAGTGGTATCAGTACTCT
CTCAAGAGCTTGTACTGTATGACATACTTTCTCCCTCTCCTGTTTCTCCA
GTTGCTGCTGGTGGTTGGTGGTGCTGGTGCTGGCAACAAAACTAATGTCA
AGTCCAGTTGACCACGTGGGAGACGTAGGAACTACCCCCCCAGCGGGCGC
AACGCCATCGGCCGAGGCCACGGCGACTGCCGACATCAACACCCCCGTTC
CAGGAGTAAGTGGTGTTGATTGTTTTTAGCGAGGAACAAGTAGACCACGT
AGGTTTGTTGGATAGCGGCTTTACCGTATGTCTCTGCCCGATGTTCAACT
GCTGTCGATAATGGGTATCGTTTCTGACTGTCGTACAGCGGCATCCGCAC
TGATCTATTTATCCCGACTTTGAGAGCTATTATAGTGCTAATTTGTGGAA
ATAATATCGGAAATGATAGAAATCATGACCACGGCAGAACAGGTCAATAT
CAATCATGCCGACGTTGGTACAGGTTATTATCCTCCTATTTTTTCGATCT
GTTGCGGGGAGTAGATCGTTGTTGCCGCACTTTTCGCTGTGGTGATAGTC
TAGTCATCGGAGTTTTTCTTCCCCTTGTCGCCCTGCCGTCAGTTGCCTGC
CGCCTTAAATCGTGTTTTAGGTGGTGTCTTGAGTGTCACATCGGCCAACA
CCTACACGCGCAAGGCAACAGCGAAGCGCAAGTATGACACGATAAGGGTG
GCCACAGAAAAGGCGCCCGCACGCCCTCTCAATGTCCAGAGTATCGAGTC
CATTGTAGACGGTACCTGCTTTCCTACTCGAAAGAGAAGTGCGCCAGGCT
CGGCCCGCACATGTTGTGGTAGGGGGTGTAACTTGACCTTTGCATCCCAC
GACGGCTCTTTTGGGCGGGTGCGGAGAACGGTACCACCTGCGGGGATTGG
TCAGCAGAGAGCACGCAAGATCTGGGTGAGAGAATGCATCCAGGATGACA
GGAGTCTCATGCTCAGTGACCACGCCGGCTTCAGCTGCGTTGTGTGCCAA
CTGTTTTTTGTTGCGGTGACGGGGTGCTCTAAAAAGCTGATAAGGAGTGC
GATGGAGCTCGGGGATCCCGGGATGTGAGTGAGAAGCACATGTTCGCACA
CCTGCATGTCTGTACGAACACTACCGTGGTGCAATAGAGGGACAACCAGT
AACGTGTTGTGCTGGCTGACCCCCCCGCACTCCGCACACGCCCGCGAAAA
CCAACGCTACTCCATCCCCCGGCACACGTTGCACACGTGCGCGCGAAACG
ATTGCAGGAAACCTCGGCACAAAGTGAACGCGCTTTCCCAGGTTATCATG
GCTTTTATCTTGGAGCTAGCAAGTCGGTGGGAGTTCCAGCCGGACAGTCA
AGACATCCACATGGCTTTTCCGAGCAAGGTGGTGAGTTTTGGTGTTCTAG
TTGAGAAGCGACTGGCGTTGGTAATGTACTCTTCTTTTTTCTATCCTTAA
TCGACGAAGTATCCGCCGTTGGTACAAGATATCTATAGAGCAACCTCGCC
GCAGCGAACATTAACATAATTGCCTACTTGTGTCTCCAAGCTTCGTCTTG
TAATACGAAGGGCTATGCCCTATCCATATATTATTAACATTCCTCGGAGT
TTGTTTCTTTTTTGTGGGGCGGGGGAATTTTCAAAGAAGTTTAGAGCAAA
CTTTAAACAAACTCCTCGCCGTTCACTCTCCTTACACGCTACGGCAAGTG
AGGCTCGTGGCTTCCTCACGTCTCACAAAGTTCCCCTTGCTCGCTTGCCC
ATGATCCTGCTGTGTGTTGTCGATCTCCGCGGCAGTACGTTTACCAGATG
TTCCTCGCGAGTGTTGCGTGCCAGTCTCTGGCAGGAGCCGTATCTTACTC
GTATTTCGTTCTGATGTGGAACGAGCATTGCCCTCATGTCCGCTTGAAGA
AAGTGGAGGAGGGGGGGAGGGCGAGCCACCCGAAGGCGAAGGTGGGCTAA
GTGGAGAAGGGAATGGTGGCGTGCCGCCCGAAGGTGGAGTGGGGGGTGCA
TCGGGTGGGGAAGATGATGTGGGAGCAGGGGACGGAGCGGGTGGCGACGG
CGGTGACCCATCGAGCGGGAGTGGCTTTGACACCCCTGAAAGTGGTGTGG
AGTGGCAAGTAGGATGGTTTGTTGCTTTTCCTCTTCCAGCTACTAGTCGT
TGTTCACTTCTAGTCGGGAAAATCATGGGAGTTGTAAGAGGCGAGGATGG
AGACGAGGTACACTGGTATACGCCTAAGAGAAGTAAGATGCCACGCCGTC
GGTCCTTGTACGGAAAGGGGGGGTGGTCTCAAGCGTTCAAACTCAAAACG
GGTAGCCACGTACGCGTGCCCGATAAGGGAAAAGAGTCAGTAGAGTGTGC
ATGCGCAACTTTCCCTGCTTTGTTTGTCAGGCACAGACATTCTGCCCCAA
TTCGTTTGGGACGCTGTCGCTGATAGTGTACCGCCACCAGATGAGGTCGG
GGGGGGGGAAGACGGAAACGAGGAAGACGAAGAAGTAGAGCAGGAAAAAG
AGGTAGGGGATGGGGAAGAGGATGATGAGCAGGGGGGATAAGAAGAAAAC
GACGATGGTGGAGCAGGAAAGCAAGTCGAGATGTCAGGCTGGCAAGAACC
CGTACAGCGACCGTCGCTCAAACTGCCTTCTCAGGTTAAAGTTCCTGTCA
GGTGCTCGGCAGCGTTTTATAGGCCCCGAA back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1065:24879..32058- >mRNA_A-nodosum_M_contig1065.6.2 ID=mRNA_A-nodosum_M_contig1065.6.2|Name=mRNA_A-nodosum_M_contig1065.6.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1347bp|location=Sequence derived from alignment at A-nodosum_M_contig1065:24879..32058- (Ascophyllum nodosum dioecious)
ATGCTGATGCCTTACGTTTGGATTTGGCTACAAATAGCACAACTACACCT
GTTACTCCCGAATCGTTGGAAGGTGTCTCTCCATTGTCGAGAGGGCTCTA
CGCTATCAGCGCACGCGAATGCTCGCGTAAGGTGCATATTTCGCTCTTCC
CGCGTCTTTTTCCGCCCGTTCGAGTTTTATACTGTACTATTTTTACGGCA
GATTTTTACTCCTGCTTTCGTAAATGATAGTAATACTGTACTGAACCACG
GAATGGCTGCGACACTGCTTTATGCAAACCGAAAGCTGACCAATACTCTC
GTCTTCCTTATGTCGCCGCGAGGACCCTGCGGGCGCAATGCGTTGCTACA
GCGGCGGTTTCGGTCAGCGATTTCTCGCAATTTCTTCCGCCCTGGGCTGG
ACGTGGCTTTCGGGATAAAAATTTGCTGCTGGTGGTTGGTGGTGCTGGTG
CTGGCAACAAAACTAATGTCAAGTCCAGTTGACCACGTGGGAGACGTAGG
AACTACCCCCCCAGCGGGCGCAACGCCATCGGCCGAGGCCACGGCGACTG
CCGACATCAACACCCCCGTTCCAGGATTGCCTGCCGCCTTAAATCGTGTT
TTAGGTGGTGTCTTGAGTGTCACATCGGCCAACACCTACACGCGCAAGGC
AACAGCGAAGCGCAAGTATGACACGATAAGGGTGGCCACAGAAAAGGCGC
CCGCACGCCCTCTCAATGTCCAGAGTATCGAGTCCATTGTAGACGGTACC
TGCTTTCCTACTCGAAAGAGAAGTGCGCCAGGCTCGGCCCGCACATGTTG
TGGTAGGGGGTGTAACTTGACCTTTGCATCCCACGACGGCTCTTTTGGGC
GGGTGCGGAGAACGGTACCACCTGCGGGGATTGGTCAGCAGAGAGCACGC
AAGATCTGGGTGAGAGAATGCATCCAGGATGACAGGAGTCTCATGCTCAG
TGACCACGCCGGCTTCAGCTGCGTTGTGTGCCAACTGTTTTTTGTTGCGG
TGACGGGGTGCTCTAAAAAGCTGATAAGGAGTGCGATGGAGCTCGGGGAT
CCCGGGATGAAACCTCGGCACAAAGTGAACGCGCTTTCCCAGGTTATCAT
GGCTTTTATCTTGGAGCTAGCAAGTCGGTGGGAGTTCCAGCCGGACAGTC
AAGACATCCACATGGCTTTTCCGAGCAAGGTGTACGTTTACCAGATGTTC
CTCGCGAGTGTTGCGTGCCAGTCTCTGGCAGGAGCCGTATCTTACTCGTA
TTTCGTTCTGATGTGGAACGAGCATTGCCCTCATGTCCGCTTGAAGAAAG
TGGAGGAGGGGGGGAGGGCGAGCCACCCGAAGGCGAAGGTGGGCTAA back to top
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