mRNA_A-nodosum_M_contig1063.6.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1063.6.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 685 bits (1767), Expect = 1.320e-219 Identity = 357/715 (49.93%), Postives = 473/715 (66.15%), Query Frame = 3
Query: 399 GGAVGSAPFSSVVALALANNERSKIVFKXXXXXXXXXXXXXXXGMALVQSLDVSFENDHIIFSGNTAGSSGGAVFIEDTGIGTVFDKVSFIENTAQIGGGVRVTASGTTMTVNTDKKQVANPTTFDRCTFTGNLAFGTGGAVDSTSGQDVFTNTLFKGNVAKIGGALRLAGKASVDNCSFNDNVSETGGGPAISNVGFISEVTNSTFHHNAFNCEPQTFLDFVKSDDTFKTVCDGCPDICLGCFFGNAQASPTCTFLLEAGMEHATSKGGNATVEELQIHKGYWRATNMSRDIYKCFNTNACTGGLTGASNYCLPGYEGPYCSVCSKNYTTSLGFTCRECSKRSVGTAIAAVLAVLGLSIGIITVWYLLYGDVGGVRRGIVDRVMRRIPIQSVKIVVTVWQILTQFASVSNVAFPNVYHKFLDGVNIFNFDFSWVVSIGCFLEIDFHDRLLWITITPLVIVGLLGVIYVIAVHIHRGSPEACFGKIRQKHVSTALLVTFLVYSSASSVVFQMFACDKLDTGNSYLRADYTIDCDSDKHRALQIYAGFMIILYPVGIPALYAGLLFSNRRALRNDKS-REESHFARAISDLWKPYKPQRFYYDVIECGRRFLIAGAVVFIYPNTVSQIAVAFAIAVFFVFVSEAMAPYKSCWDAWISRIGHAIVFSSMYLALLLKVNVSGENDSSQKSFGVILVGVHGCMILAVIAQVVVLATSLR 2540
GG +GS SV +N+ S +V +AL+ L V+ +++ F GN A +GGAVF+ TG G +F FI N+AQ+GG V SG + N D NPTTFD C F N A TGGA+DS +GQD F N+ F+GN A GG LRLAG AS+D CSF DN+S+ GG A+SN+G + V N TF N F+C+P +LD+ S + ++ C GC C GCFF PTCT + MEH TS GG T+E+L + +GYWRA+ S +++ C+N++AC GG+TG + YCL GYEGPYC+VCS YTT L F C CS + A+AAVLAV+ L + Y + G VG VR G+V R+ + IP+QSVKIV+ WQILTQF SV+NV +P+VY +FLDG+++FNFD SWV+S GC +IDFHDRLL T++P++ + L Y AV ++RG E+ I KHVS LL+TFL+YSS S+ +F+ F C++L+ G +YLRADYTIDCDS KH+A Q+YAGFM+++Y VGIPALYA LLF +R L++ + RE++ + SDLWKPYKP FYY+VIECGRR L+AG VVFI+PNT +QIA+ +A FV VSE +AP+ S WDAW++R GH +VF SMY+ALLLKV+VSGE SQ+ + ++LV H CMILAV+ + VL SL+
Sbjct: 537 GGVIGSFSTDSV------SNQGSTLVMNGTTAFVNNTCGANGGALALLGGLAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGN-LKENADISP-PNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFF-EPPVPPTCTDV----MEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAES-LQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLK 1237
BLAST of mRNA_A-nodosum_M_contig1063.6.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 667 bits (1722), Expect = 7.930e-216 Identity = 364/726 (50.14%), Postives = 484/726 (66.67%), Query Frame = 3
Query: 393 SSGGAVGSAPFSSVVALALANNERSKIVFKXXXXXXXXXXXXXXXGMALVQSLDVSFENDHIIFSGNTAGSSGGAVFIEDTGIGTVFDKVSFIENTAQIGGGVRVTASGTTMTVNTDKKQVANPTTFDRCTFTGNLAFGTGGAVDSTSGQDVFTNTLFKGNVAKIGGALRLAGKASVDNCSFNDNVSETGGGPAISNVGFISEVTNSTFHHNAFNCEPQTFLDFVKSDDTFKTVCDGCPDICLGCFFGNAQASPTCTFLLEAGMEHATSKGGNATVEELQIHKGYWRATNMSRDIYKCFNTNACTGGLTGASNYCLPGYEGPYCSVCSKNYTTSLGFTCRECSKRSVGTAIAAVLAVLGLSIGIITVWYLLYGDVGGVRRGIVDRVMRRIPIQSVKIVVTVWQILTQFASVSNVAFPNVYHKFLDGVNIFNFDFSWVVSIGCFLEIDFHDRLLWITITPLVIVGLLGVIYVIAV-HIHRGSPEACFGKIRQKHVSTALLVTFLVYSSASSVVFQMFACDKLDTGNSYLRADYTIDCDSDKHRALQIYAGFMIILYPVGIPALYAGLLFSNRRALRNDKS-REESHFARAISDLWKPYKPQRFYYDVIECGRRFLIAGAVVFIYPNTVSQIAVAFAIAVFFVFVSEAMAPYKSCWDAWISRIGHAIVFSSMYLALLLKVNVSGENDSSQKSFGVILVGVHGCMILAVIAQVVVLATSLRSTKYLEDP 2564
+ GG VGS S L N + S ++ XXXXXXXXXXXXXXX +AL+ L V+ ++ +F GNTA +GGA+F+ T +G F +S + N+AQ+GG + + SGT+ + PTTF++C FT N A TGGAVD+ +GQD F N++F+GN A GGALRLAG A V+NCSF +NVS+ GGG A+SN+GF+S V+N +F N + C+ FL+ +S ++ +CDGCP C GC F Q P C+ LE H+ S GG T++ L I GYWRAT S ++ +C+N +AC GG+TG+ +YCL GYEGPYC+VCS YT LG C +CS R+ A+ ++V GL + V Y + G+ G RG+V+R R +P+QSVKIV+ WQILTQF SV+N+ FP+VY +FLD + +FNFD WV+S GC ++DFHDRLL TI P+V + L +Y A + HR S + ++ KHVS LL+TFLVY+S S+V+FQ FAC++LD +YLRADY I+CDS KH A Q+YAGFMI+LY VGIPALY G LF + LR D++ RE+ +DLWKPY+P FYY+VIEC RR L+AG VVFIYPNT +QIAVA IAV F +SEA+APY S WD W+ R+GHA+V SMY+ALLLKV+VS E SSQ+ F +LV H CM+ V+ +V++ A SL K + P
Sbjct: 255 ADGGVVGSFVLDS-----LYNPQGSYLIVXXXXXXXXXXXXXXXXALALLGGLSVTIGTENTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFN---PEDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVECEGCSFEEPQLVPKCSDALE----HSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSED--LQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQQP 966
BLAST of mRNA_A-nodosum_M_contig1063.6.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 640 bits (1651), Expect = 2.280e-205 Identity = 333/682 (48.83%), Postives = 443/682 (64.96%), Query Frame = 3
Query: 531 MALVQSLDVSFENDHIIFSGNTAGSSGGAVFIEDTGIGTVFDKVSFIENTAQIGGGVRVTASGTTMTVNTDKKQVANPTTFDRCTFTGNLAFGTGGAVDSTSGQDVFTNTLFKGNVAKIGGALRLAGKASVDNCSFNDNVSETGGGPAISNVGFISEVTNSTFHHNAFNCEPQTFLDFVKSDDTFKTVCDGCPDICLGCFFGNAQASPTCTFLLEAGMEHATSKGGNATVEELQIHKGYWRATNMSRDIYKCFNTNACTGGLTGASNYCLPGYEGPYCSVCSKNYTTSLGFTCRECSKRSVGTAIAAVLAVLGLSIGIITVWYLLYGDVGGVRRGIVDRVMRRIPIQSVKIVVTVWQILTQFASVSNVAFPNVYHKFLDGVNIFNFDFSWVVSIGCFLEIDFHDRLLWITITPLVIVGLLGVIYVIAVHIHRGSPEACFGKIRQKHVSTALLVTFLVYSSASSVVFQMFACDKLDTGNSYLRADYTIDCDSDKHRALQIYAGFMIILYPVGIPALYAGLLFSNRRALRNDKS-REESHFARAISDLWKPYKPQRFYYDVIECGRRFLIAGAVVFIYPNTVSQIAVAFAIAVFFVFVSEAMAPYKSCWDAWISRIGHAIVFSSMYLALLLKVNVSGENDSSQKSFGVILVGVHGCMILAVIAQVVVLATSLRSTKYLEDPRPR 2573
+AL+ L +S F N+A +GGAV++ DT IG F V F N+AQ+GG V SG V + PTTF RC FT N A TGGAVDS SGQD+F +T+F+GN A GGALRLAG+AS+ NCSF +N+S+ G G A+SNVG ISE++N+TF N FNC P TFL++ S D C GC C GC P C+ ++ H+ S GG T+E L I GYWRATN S ++ C+N +AC GG+TGA+ YC+ GYEGPYC++CS +Y+ LGFTC +C R+ G +A LAV+GL + V Y+ + + + R +P+Q++KI+V WQI+TQF S +NV +P+VY +FL+G+++FNFD SWV+S GC +++DFHDRLL TI P++ + L Y I+RG+ A + +HVS LL+ FLVYS SSVVFQ FACD+L+ G YLRADY I+CDS KH+ ++YAGFMI+LYPVGIPA Y LL +R L D RE+ +IS+LW+PY+P +YY+VIECGRR L+ G VVFIYPNT +QIA+ + V F +SEA+ PY WD W+SR+ HA+VF S+Y+ALLLKV+VS E SSQK F +LV H CMILAV+ + ++L R K ++P PR
Sbjct: 339 LALLGGLSISVNTGETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGN---VKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYT-SGDALDEACSGCQTTCDGCV--QPPVVPLCSDVIP----HSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGN-AATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSR-VKEQDEPAPR 1008
BLAST of mRNA_A-nodosum_M_contig1063.6.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 647 bits (1670), Expect = 1.480e-201 Identity = 331/658 (50.30%), Postives = 440/658 (66.87%), Query Frame = 3
Query: 582 FSGNTAGSSGGAVFIEDTGIGTVFDKVSFIENTAQIGGGVRVTASGTTMTVNTDKKQVANPTTFDRCTFTGNLAFGTGGAVDSTSGQDVFTNTLFKGNVAKIGGALRLAGKASVDNCSFNDNVSETGGGPAISNVGFISEVTNSTFHHNAFNCEPQTFLDFVKSDDTFKTVCDGCPDICLGCFFGNAQASPTCTFLLEAGMEHATSKGGNATVEELQIHKGYWRATNMSRDIYKCFNTNACTGGLTGASNYCLPGYEGPYCSVCSKNYTTSLGFTCRECSKRSVGTAIAAVLAVLGLSIGIITVWYLLYGDVGGVRRGIVDRVMRRIPIQSVKIVVTVWQILTQFASVSNVAFPNVYHKFLDGVNIFNFDFSWVVSIGCFLEIDFHDRLLWITITPLVIVGLLGVIYVIAVHIHRGSPEACFGKIRQKHVSTALLVTFLVYSSASSVVFQMFACDKLDTGNSYLRADYTIDCDSDKHRALQIYAGFMIILYPVGIPALYAGLLFSNRRALRNDKSREESHFARAIS--DLWKPYKPQRFYYDVIECGRRFLIAGAVVFIYPNTVSQIAVAFAIAVFFVFVSEAMAPYKSCWDAWISRIGHAIVFSSMYLALLLKVNVSGENDSSQKSFGVILVGVHGCMILAVIAQVVVLATSLRSTK 2549
F+ N A +GGAVF+ G G F +F N+AQ+GG V V SG + V + NPTTF+RC F GN A TGGA+DS +G D F +T F+ N A GGALRLAG AS+++CSF +N S+ GG A+SN+G + N +F N F+C TFL + S D F+ VC+GC C+GC F + PTCT LLE H+TS G T+E L I GYWRAT ++ C++ +AC GG+TG S YCL GYEGPYC++CS+ Y+ + FTCR CS + G A+AA LAV+GL + + V Y+ G+ G RGIV+RV R IP+QSVKIVV WQI+TQF +V+NV +P+VY FL+G+ +FNFD SW++S GC +++DFHDRLL TI P+ LL Y AV IHRG+ E +R KHV LL+TF VYSS S+ +F+ FAC+ L+ G +YL ADY I+CDS KH+ ++YAGFM++LY GIPALY+ LLF +R L+ ++ + +RA S DLWKPYKP FYY+V+EC RR L+AG VVFIYPN+ +QIA+ +A FV +SE +APY S WD WI+R+GH +V +SMYLALLLKV+VS E SSQ F +LV H M++ +A+ +VLA +LR+ +
Sbjct: 946 FTENAAAVAGGAVFVSGAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGV--ADIEPPNPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAGTGGALRLAGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQTACVGCAFADPLLVPTCTDLLE----HSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATET-LENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAER 1596
BLAST of mRNA_A-nodosum_M_contig1063.6.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 634 bits (1634), Expect = 1.630e-198 Identity = 327/673 (48.59%), Postives = 444/673 (65.97%), Query Frame = 3
Query: 531 MALVQSLDVSFENDHIIFSGNTAGSSGGAVFIEDTGIGTVFDKVSFIENTAQIGGGVRVTASGTTMTVNTDKKQVAN--PTTFDRCTFTGNLAFGTGGAVDSTSGQDVFTNTLFKGNVAKIGGALRLAGKASVDNCSFNDNVSETGGGPAISNVGFISEVTNSTFHHNAFNCEPQTFLDFVKSDD-TFKTVCDGCPDICLGCFFGNAQASPTCTFLLEAGMEHATSKGGNATVEELQIHKGYWRATNMSRDIYKCFNTNACTGGLTGASNYCLPGYEGPYCSVCSKNYTTSLGFTCRECSKRSVGTAIAAVLAVLGLSIGIITVWYLLYGDVGGVRRGIVDRVMRRIPIQSVKIVVTVWQILTQFASVSNVAFPNVYHKFLDGVNIFNFDFSWVVSIGCFLEIDFHDRLLWITITPLVIVGLLGVIYVIAVHIHRGSPEACFGKIR---QKHVSTALLVTFLVYSSASSVVFQMFACDKLDTGNSYLRADYTIDCDSDKHRALQIYAGFMIILYPVGIPALYAGLLFSNRRALRNDKS-REESHFARAISDLWKPYKPQRFYYDVIECGRRFLIAGAVVFIYPNTVSQIAVAFAIAVFFVFVSEAMAPYKSCWDAWISRIGHAIVFSSMYLALLLKVNVSGENDSSQKSFGVILVGVHGCMILAVIAQVVVLA 2528
+AL + + + F+GN+AG +GGAVF+ GIG F VSFI N AQ+GG V SG D+ ++ PT FDRC F N+A +GGAVDS +GQD+ N++FKGN A++GGALRLAG VS G A+SN+G +S + NS+F N F C P FL++ +D+ TF+ VCDGC C GC F A PTC+ + M+H TS GG T+E L I GYWRAT+ S++I C+N +AC GG+TG + YCL YEGPYCS+CS Y ++LG++C +C RS G A +AVL L + ++ + Y++ G+ G R +++R+ +P+QSVKIV+ WQILTQFAS +NV +P VY +FLDG+ +F FD W++S GC L++ FH RLL TI P+ V LL Y A I+R + E K+R KHV LL+TFLVYSS SS +F+ FACD+L+ G +YLR DY I+CDS KH+ Q+YAGFMI+LYP+GIP LY+ LLF +R L+ DK+ R++S ++ S+LW+PYKP FYY+VIECGRR L+ G VVFIYPNT +Q+A+ +A FF +SEA++PY S W+ W++R+GH +V SMY+ALLLKV+VS E SQ F +LV VH CMIL+V+ + V+A
Sbjct: 746 LALFDACSLDINTADVSFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGN------DRGMLSPIIPTKFDRCRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGTFEAVCDGCRVACDGCSFDEPPAVPTCSDV----MDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANE----KLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1404
BLAST of mRNA_A-nodosum_M_contig1063.6.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 635 bits (1638), Expect = 3.190e-198 Identity = 334/677 (49.34%), Postives = 446/677 (65.88%), Query Frame = 3
Query: 528 GMALVQSLDVSFENDHIIFSGNTAGSSGGAVFIEDTGIGTVFDKVSFIENTAQIGGGVRVTASGTTMTVNTDKKQVANPTTFDRCTFTGNLAFGTGGAVDSTSGQDVFTNTLFKGNVAKIGGALRLAGKASVDNCSFNDNVSETGGGPAISNVGFISEVTNSTFHHNAFNCEPQTFLDFVKSDDTFKTVCDGCPDICLGCFFGNAQASPTCTFLLEAGMEHATSKGGNATVEELQIHKGYWRATNMSRDIYKCFNTNACTGGLTGASNYCLPGYEGPYCSVCSKNYTTSLGFTCRECSKRSVG-TAIAAVLAVLGLSIGIITVWYLLYGDVG-GVRRGIVDRVMRRIPIQSVKIVVTVWQILTQFASVSNVAFPNVYHKFLDGVNIFNFDFSWVVSIGCFLEIDFHDRLLWITITPLVIVGLLGVIYVIAVHIHRGSPEACFGKIRQKHVSTALLVTFLVYSSASSVVFQMFACDKLDTGNSYLRADYTIDCDSDKHRALQIYAGFMIILYPVGIPALYAGLLFSNRRALRN-DKSREESHFARAISDLWKPYKPQRFYYDVIECGRRFLIAGAVVFIYPNTVSQIAVAFAIAVFFVFVSEAMAPYKSCWDAWISRIGHAIVFSSMYLALLLKVNVSGENDSSQKSFGVILVGVHGCMILAVIAQVVVLATSLRSTK 2549
GMAL + ++ + F GN+AG +G A+F+ IG F+ + + SGT + PTTFD C F GN A TGGA++S +G+D N++F+GN A GGALRLAG+A + NCSF +N S+ G G A+SN+GFIS +TN++F N F+C TF + S D F+ +C+GC C GC F +P CT + M+H+TS GGN T++ L I +G+WRA+ S ++ C++ +AC GG+TGAS YC GYEGPYC +CS YT L F C +CS+ S G A+A VLA+L + + + V Y+ G+VG G + GIV+ V R IP+QS+KIV+ WQILTQF SV+NV +P+VY LD +++FNFD SW++S GC ++++FH RLL TI+P+V + LL Y A I+RG PE I KHV+ LL+TF VYSS SS +F+ FACD LD YLRADY+I+C+S +HR +Q+YAGFMI++Y VGIPALYA LLF +R L++ D REE ++IS+LW+PYKP FYY+VIEC RR L+AG VVFIYPNT +QIAV IA F +SE +APY S WD WISR+GH +VF SMY+ALLLKV+VS E SSQ+ F +LV VH CMIL V+ + V A SLR +
Sbjct: 832 GMALFVDVALNIGTVDVSFLGNSAGVAGXAMFVSSVSIGPRFNXXXXXXXXXXXXXXISIFGSGT-------DESGDLPTTFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETTCDGCVFAEGSLAPICTEV----MDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEK-LNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREER 1496
BLAST of mRNA_A-nodosum_M_contig1063.6.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 630 bits (1626), Expect = 1.880e-195 Identity = 329/670 (49.10%), Postives = 442/670 (65.97%), Query Frame = 3
Query: 546 SLDVSFENDHIIFSGNTAGSSGGAVFIEDTGIGTVFDKVSFIENTAQIGGGVRVTASGTTMTVNTDKKQVANPTTFDRCTFTGNLAFGTGGAVDSTSGQDVFTNTLFKGNVAKIGGALRLAGKASVDNCSFNDNVSETGGGPAISNVGFISEVTNSTFHHNAFNCEPQTFLDFVK-SDDTFKTVCDGCPDICLGCFFGNAQASPTCTFLLEAGMEHATSKGGNATVEELQIHKGYWRATNMSRDIYKCFNTNACTGGLTGASNYCLPGYEGPYCSVCSKNYTTSLGFTCRECSKRSVGTAIAAVLAVLGLSIGIITVW-YLLYGDVG-GVRRGIVDRVMRRIPIQSVKIVVTVWQILTQFASVSNVAFPNVYHKFLDGVNIFNFDFSWVVSIGCFLEIDFHDRLLWITITPLVIVGLLGVIYVIAVHIHRGSPEACFGKIRQKHVSTALLVTFLVYSSASSVVFQMFACDKLDTGNSYLRADYTIDCDSDKHRALQIYAGFMIILYPVGIPALYAGLLFSNRRALRNDKS-REESHFARAISDLWKPYKPQRFYYDVIECGRRFLIAGAVVFIYPNTVSQIAVAFAIAVFFVFVSEAMAPYKSCWDAWISRIGHAIVFSSMYLALLLKVNVSGENDSSQKSFGVILVGVHGCMILAVIAQVVVLATSLRS 2543
+L+ SF D I F GN+AG +GGA+F+ G +F +V+F N A+IGG V + G + NPTTFDRC F N TGGA++S +G+D F ++F+GN A GGALRLAG A NCSF N ++ G G A+SN+G+IS V ++ F N F+C +LDF++ SDD F+ +C GC C GC F P CT + MEHATS GGN T+E L I GYWRAT S D+ C++ AC GG+T S YCL GYEGPYCSVCS Y+ LGF C +C +++ G + V+ +G +I + ++ Y+ G+ G G G ++RV R IP+QSVKIV+ WQILTQF S++NV +P+VY FL +++FNFD W +S+ C +++DFHDRLL TI+P+ + L Y A ++R P+ G ++ KH S LL+TF VYSS SS++F+ FAC++L YLR+DY I+CDS KH+ Q+YA FMI++Y VGIPALYAGLLF +R L+ D S R + +I+DLW+PY FYY+VIECGRR L+AG VVFIYPNT +QIAV IA FV VSEA+ PYKS WD WI+R+GH +VFSSM+L LLLKVNVS E+ +SQ+ F ++LV VH M++A++ + VVL LR+
Sbjct: 948 ALNTSFNVD-ISFVGNSAGVAGGAIFLSGVDTGPIFTEVNFTSNVAEIGGAVSLFGCGI------EPSGGDNPTTFDRCRFVDNQGASTGGAIESAAGKDAFNGSIFEGNSAGTGGALRLAGAAYFFNCSFVGNTADEGEGAAVSNIGYISAVESNFFSGNRFDCRSSMYLDFIQQSDDPFEVMCSGCEVTCEGCVFDEGLLVPACTEV----MEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDT-LGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVVLFFQLRA 1605
BLAST of mRNA_A-nodosum_M_contig1063.6.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI) HSP 1 Score: 618 bits (1594), Expect = 1.080e-194 Identity = 328/685 (47.88%), Postives = 423/685 (61.75%), Query Frame = 3
Query: 528 GMALVQSLDVSFENDHIIFSGNTAGSSGGAVFIEDTGIGTVFDKVSFIENTAQIGGGVRVTASGTTMTVNTDKKQVANPTTFDRCTFTGNLAFGTGGAVDSTSGQDVFTNTLFKGNVAKIGGALRLAGKASVDNCSFNDNVSETGGGPAISNVGFISEVTNSTFHHNAFNCEPQTFLDFVKSDDTFKTVCDGCPDICLGCFFGNAQASPTCTFLLEAGMEHATSKGGNATVEELQIHKGYWRATNMSRDIYKCFNTNACTGGLTGASNYCLPGYEGPYCSVCSKNYTTSLGFTCRECSKRSVGTAIAAVLAVLGLSIGIITV--WYLLYGDVGGVRRGIVDRVMRRIPIQSVKIVVTVWQILTQFASVSNVAFPNVYHKFLDGVNIFNFDFSWVVSIGCFLEIDFHDRLLWITITPLVIVGLLGVIYVIAVHIHRGSPEACFGKIRQKHVSTALLVTFLVYSSASSVVFQMFACDKLDTGNSYLRADYTIDCDSDKHRALQIYAGFMIILYPVGIPALYAGLLFSNRRALRNDK-SREESHFARAISDLWKPYKPQRFYYDVIECGRRFLIAGAVVFIYPNTVSQIAVAFAIAVFFVFVSEAMAPYKSCWDAWISRIGHAIVFSSMYLALLLKVNVSGENDSSQKSFGVILVGVHGCMILAVIAQVVVLATSLRSTKYLEDPRPR 2573
G+A L V + + FSGN A +GGAVF+ G+G VF V + SG + +PTTFDRC+F GN A TGGA +S +GQD F +F GN A GGALR+AG ASV+NCSF DNVS+ G G A+SN+GFIS++ + F N F+C TFLD S D F+ VC GC +C GC F P C+ + M H+TS GGN T++E+ I +GYWRAT++S ++ +CF +AC GG+TG S YCL GYEGPYCS+CS YT LGF+C +CS+ G + + + D GG G+V+R+ R IP+QSVKIV+ WQILTQF SV+NV +P+VY FLD +++FNFD SWV S GC +IDFHDRLL TI+PLV + L +RGSP+ + QKHVS LL+TFLVYS+ SSV+FQ FAC++L G +YLR+DY I+CDS H+A Q+YAGFMI+LYPVGIPALYAGLLF +R LR D+ +RE+ + S LW+PYKP FYY++ AV IAV F +SEA+ PY S WDAW SR+GH +V SMY+ALLLKV+VS E SSQ+ F ILV VH CM+ V+ + ++L+ SLR+ K E PRPR
Sbjct: 544 GLAAFDGLSVDIDTAGVTFSGNAAEVAGGAVFVSGAGVGFVFXXXXXXXXXXXXXXAVSIVGSGNLKGF--FDLEWPSPTTFDRCSFVGNQASATGGAFESAAGQDAFVGNVFVGNKAGTGGALRMAGTASVENCSFVDNVSDDGEGAALSNIGFISKMAHIYFSDNVFDCPSGTFLDLNASGDPFEAVCAGCDIVCDGCVFEQGLVGPACSEV----MAHSTSTGGNTTLQEVSIDRGYWRATSVSEEVLECFQADACLGGVTGTSGYCLEGYEGPYCSICSGGYTKQLGFSCTKCSENKAGGIVVXXXXXXXXXXXXXXXXSYIMSRDDDGGAEGGLVERMARHIPLQSVKIVIVSWQILTQFTSVANVTYPDVYQDFLDAMDVFNFDLSWVFSTGCIFDIDFHDRLLVSTISPLVALSFLACTNAAVARTNRGSPQNLQNNVWQKHVSMGLLLTFLVYSNVSSVLFQSFACEELHDGKNYLRSDYRIECDSSGHKAFQVYAGFMIVLYPVGIPALYAGLLFRDRDVLRKDEINREDPPRVTSTSHLWEPYKPSAFYYEI------------------------AVTLVIAVAFTILSEALDPYSSRWDAWTSRMGHMVVLVSMYVALLLKVDVSDERASSQRVFEAILVAVHACMVTLVVVETIILSVSLRAAKEREAPRPR 1198
BLAST of mRNA_A-nodosum_M_contig1063.6.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 622 bits (1604), Expect = 9.050e-189 Identity = 337/671 (50.22%), Postives = 428/671 (63.79%), Query Frame = 3
Query: 549 LDVSFENDHIIFSGNTAGSSGGAVFIEDTGIGTVFDKVSFIENTAQIGGGVRVTASGTTMTVNTDKKQVA-----NPTTFDRCTFTGNLAFGTGGAVDSTSGQDVFTNTLFKGNVAKIGGALRLAGKASVDNCSFNDNVSETGGGPAISNVGFISEVTNSTFHHNAFNCEPQTFLDFVKSDDTFKTVCDGCPDICL--GCFFGNAQASPTCTFLLEAGMEHATSKGGNATVEELQIHKGYWRATNMSRDIYKCFNTNACTGGLTGASNYCLPGYEGPYCSVCSKNYTTSLGFTCRECSKRSVGTAIAAVLAVLGLSIGIITVWYLLYGDVGGVRRGIVDRVMRRIPIQSVKIVVTVWQILTQFASVSNVAFPNVYHKFLDGVNIFNFDFSWVVSIGCFLEIDFHDRLLWITITPLVIVGLLGVIYVIAVHIHRGSPEACFGKIRQKHVSTALLVTFLVYSSASSVVFQMFACDKLDTGNSYLRADYTIDCDSDKHRALQIYAGFMIILYPVGIPALYAGLLFSNRRAL-RNDKSREESHFARAISDLWKPYKPQRFYYDVIECGRRFLIAGAVVFIYPNTVSQIAVAFAIAVFFVFVSEAMAPYKSCWDAWISRIGHAIVFSSMYLALLLKVNVSGENDSSQKSFGVILVGVHGCMILAVIAQVVVLATSL 2537
L V F ++FS NTA +GGAVF+ +G V V F N AQ+GG V SG + K+ A NPT F RC F N A TGGAV++ +GQDVF + LF GGALRLAG A+++NCSF +NVSE GGG A+SN+G IS++ N ++ N F+C FLDF S D + CDGC C GCF P + MEH S GG + L++ G+WRAT + D+ C+N NAC G+T +S CL GYEGPYCS+CS YT L F C ECS + G +A+ LAV+ L + + V Y++ VG RG V+R+ R IP+QS KIVV WQILTQF +V+NV +P+VY +FLDG+ +FNFD SWV+S GC + +DFHDRLL TI P+V + L Y A I+RG+ E I +HVS LL+T VYSS SS +FQ FAC+ L G +YLRADY I CDS KH+ALQ+YAG M+++Y VGIPALY LLF +R L R+ REE+ + S+LWKPYKP FYY+VIECGRR L+AG VVFIYPNT QIA+ +A FV VSE +APY S WD W+SR+GHA+VF SMY+ALLLKV+VS E SQ+ F V+LV H CMIL ++ + VVL +L
Sbjct: 1390 LHVEFGAAGVVFSNNTAAVAGGAVFVSGADVGPVLSDVLFEANVAQVGGAVSTVGSG-------NLKEYAGLAPPNPTIFTRCRFVNNQAAATGGAVETAAGQDVFVDCLFXXXXXGTGGALRLAGTATLENCSFVENVSEDGGGAAVSNIGSISKMDNISYRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGCF-----EEPPLVPICALAMEHTGSAGGTNNITLLRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATET-LQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCAL 2047
BLAST of mRNA_A-nodosum_M_contig1063.6.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI) HSP 1 Score: 604 bits (1557), Expect = 4.740e-188 Identity = 309/633 (48.82%), Postives = 406/633 (64.14%), Query Frame = 3
Query: 528 GMALVQSLDVSFENDH-IIFSGNTAGSSGGAVFIEDTGIGTVFDKVSFIENTAQIGGGVRVTASGTTMTVNTDKKQVANPTTFDRCTFTGNLAFGTGGAVDSTSGQDVFTNTLFKGNVAKIGGALRLAGKASVDNCSFNDNVSETGGGPAISNVGFISEVTNSTFHHNAFNCEPQTFLDFVKSDDTFKTVCDGCPDICLGCFFGNAQASPTCTFLLEAGMEHATSKGGNATVEELQIHKGYWRATNMSRDIYKCFNTNACTGGLTGASNYCLPGYEGPYCSVCSKNYTTSLGFTCRECSKRSVGTAIAAVLAVLGLSIGIITVWYLLYGDVGGVRRGIVDRVMRRIPIQSVKIVVTVWQILTQFASVSNVAFPNVYHKFLDGVNIFNFDFSWVVSIGCFLEIDFHDRLLWITITPLVIVGLLGVIYVIAVHIHRGSPEACFGKIRQKHVSTALLVTFLVYSSASSVVFQMFACDKLDTGNSYLRADYTIDCDSDKHRALQIYAGFMIILYPVGIPALYAGLLFSNRRALRNDKSREESHFAR--AISDLWKPYKPQRFYYDVIECGRRFLIAGAVVFIYPNTVSQIAVAFAIAVFFVFVSEAMAPYKSCWDAWISRIGHAIVFSSMYLALLLK 2417
GMAL + + + I F NTA SGGAVF+ G G F SF+ N+AQIGG V SG + V + + NPTTFDRC F GN A TGGA+D+ +G D F +T F+ N A GGALRLAG AS+ NCSF +N S GGG A+SN+G +S F N F+C FL + +SDD F+TVCDGC F P C LLE H+TS G T+E L I +GYWRAT S ++ C++ AC GG+TG + YCL GY+GPYC+VCS ++ GFTCRECS + G +A LAV G+ ++ V Y+ G G +GIV+RV IP+QSVKIVV WQ++TQF V+N+ +P+VY FLDG+ +FNFD W++S GC ++DFHDRLL TI P++ V +L Y A IHRG+ + + KHV LL++F VYSS SS +F+ FAC+ L G +YLRADY I+CDS +H+ ++YAG M+++Y VGIP LY LL+ +R L+ + +E +R + SDLWKPY+P FYY+VIECGRR L+AG VVFIYPN+ +QIA+ IA FV +SE+++PY S WD WISR GH +V +SMY+ALLLK
Sbjct: 736 GMALYGGCALVIDTEMGISFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSGGSKGV--EDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRLAGTASIINCSFVENYSNDGGGAAVSNIGIVSSAEKINFSGNGFDCPTGMFLAYNESDDLFETVCDGCQTXXXXXAFAEPLLVPMCRDLLE----HSTSPDGKLTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFLKERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITLVIAFVFVLISESLSPYASRWDTWISRTGHVVVVTSMYVALLLK 1362 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1063.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1063.6.1 >prot_A-nodosum_M_contig1063.6.1 ID=prot_A-nodosum_M_contig1063.6.1|Name=mRNA_A-nodosum_M_contig1063.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=850bp MYVDYASVVTCTAKSYFLDNHAGSYGGAVIVLREGTAAWTAAALFSANSAback to top mRNA from alignment at A-nodosum_M_contig1063:234419..239855+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1063.6.1 ID=mRNA_A-nodosum_M_contig1063.6.1|Name=mRNA_A-nodosum_M_contig1063.6.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5437bp|location=Sequence derived from alignment at A-nodosum_M_contig1063:234419..239855+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1063:234419..239855+ >mRNA_A-nodosum_M_contig1063.6.1 ID=mRNA_A-nodosum_M_contig1063.6.1|Name=mRNA_A-nodosum_M_contig1063.6.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2550bp|location=Sequence derived from alignment at A-nodosum_M_contig1063:234419..239855+ (Ascophyllum nodosum dioecious)back to top |