mRNA_A-nodosum_M_contig1061.12.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1061.12.2 vs. uniprot
Match: D8LBT3_ECTSI (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT3_ECTSI) HSP 1 Score: 167 bits (424), Expect = 4.210e-45 Identity = 98/184 (53.26%), Postives = 112/184 (60.87%), Query Frame = 1
Query: 562 AKISLPLPTVTKRPWRVPCAVARFERVHTGAKYGYGGENALFYEKSRPGYLADALRAIEDEIRRIRKDTTDDSHLLVDLGCGTGKFTREILPFARSEELSVIGIEPVEAMRKQFEAALPGVQVKDGRGDNIPLLNCSARAMIAPQSFHWMSSPETLREVHRVLVPGGLFILVWNTRDGSKSWVR 1113
A++S L V RP VP + VHT A G+GG NA FYE +RPGY A ALRAIE EIRR T LLVDLG GTGKFTR ILPFA SE G G+ IP+ + SARA++APQSFHWMSS TLREVHRVLVPGGLF+L+WNTRD ++ WVR
Sbjct: 5 ARLSALLSRV--RPPFVPPSTKAGRWVHTEAVGGFGGNNASFYENTRPGYPAHALRAIEAEIRR--SGLTGSGELLVDLGAGTGKFTRNILPFALSE----------------------------GAGEAIPIPDSSARALVAPQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVR 156
BLAST of mRNA_A-nodosum_M_contig1061.12.2 vs. uniprot
Match: A0A3A6QMH5_9PSED (Class I SAM-dependent methyltransferase n=1 Tax=Pseudomonas sp. LS-2 TaxID=2315859 RepID=A0A3A6QMH5_9PSED) HSP 1 Score: 153 bits (386), Expect = 1.720e-38 Identity = 102/286 (35.66%), Postives = 146/286 (51.05%), Query Frame = 1
Query: 640 VHTGAKYGYGGENALFYEKSRPGYLADALRAIEDEIRRIRKDTTDDSHLLVDLGCGTGKFTREILPFARSEELSVIGIEPVEAMRKQFEAALPGVQVKDGRGDNIPLLNCSARAMIAPQSFHWMSSPETLREVHRVLVPGGLFILVWNTRDGSKSWVRGLEGIIDPCYGTDVPRQHGGTWKRSFQDLEQQSGSGGESARERPRKFFGELVEQHFEHSVFLNKDE--LNRLVRSLSVVAIRPESEQADASRRIQELIESHPDTRDKLQNTGKVELFYDTEVYWCRRL 1491
VHT A+ G+ + A Y + RP Y +AL I +T +VDLG GT KFTR + P +IG+EPV+AMR +F A LP VQ+ G +IPL + +A A++ Q+FHW + L E+HRVL PGG L+WN RD S WV + II P G D PR H G W+R F ++F + F +S + D +NR + S+S +A P +++A + +++ELI +HP L+ V+ Y T+ Y C RL
Sbjct: 4 VHTAAQVGFSTQ-AGTYSQGRPDY-PEALNTWLSTALGIGPQST-----VVDLGAGTAKFTRLLKPLTEH----LIGVEPVDAMRNEFTAHLPDVQIVPGTAQSIPLADATADALVCAQAFHWFADTAALSEIHRVLKPGGRLGLIWNVRDESVDWVAEITRIITPYEG-DTPRFHTGHWRRPFDG-----------------RYFSQPASSCFNYSHSGSPDTVIMNRFL-SVSFIAALPAADKALVTDQLRELIGTHP----ALRGRETVDFPYQTQAYLCHRL 255
BLAST of mRNA_A-nodosum_M_contig1061.12.2 vs. uniprot
Match: F2KEZ6_PSEBN (Methyltransf_11 domain-containing protein n=1 Tax=Pseudomonas brassicacearum (strain NFM421) TaxID=994484 RepID=F2KEZ6_PSEBN) HSP 1 Score: 151 bits (382), Expect = 6.170e-38 Identity = 103/285 (36.14%), Postives = 148/285 (51.93%), Query Frame = 1
Query: 637 RVHTGAKYGYGGENALFYEKSRPGYLADALRAIEDEIRRIRKDTTDDSHLLVDLGCGTGKFTREILPFARSEELSVIGIEPVEAMRKQFEAALPGVQVKDGRGDNIPLLNCSARAMIAPQSFHWMSSPETLREVHRVLVPGGLFILVWNTRDGSKSWVRGLEGIIDPCYGTDVPRQHGGTWKRSFQDLEQQSGSGGESARERPRKFFGELVEQHFEHSVFLNKDELNRLVRSLSVVAIRPESEQADASRRIQELIESHPDTRDKLQNTGKVELFYDTEVYWCRRL 1491
RVH A+ GY E A Y K RP Y ++ + D + D + +S ++DLG GTGKFTR + S ++ VI +EPV AMR +F LP ++ G ++IPL + +A A+I Q+FHW ++ TLRE+HRVL PGG L+WN RD S WV + II P G D PR H G W+ F+ G E F ++ H+ L+R + S+S +A P +E+ + ++ LI++HP L +E Y T+ Y CRRL
Sbjct: 3 RVHKAAQQGYSTE-ASTYTKGRPDYPSEICTWLRDTL-----DISPES-TVIDLGAGTGKFTRLL----DSLDIDVIAVEPVRAMRVEFAKHLPDTRILAGTAESIPLEDRAADALICAQAFHWFANETTLREIHRVLKPGGRLGLIWNVRDESVDWVAAITKIITPYEG-DAPRFHTGNWQLPFK---------GHYFSEPELTCFKQI------HAGSAESVILDRFL-SVSFIAALPPAEKKVVTEKLLTLIQTHP----ALCGGKTIEFPYQTQAYLCRRL 255
BLAST of mRNA_A-nodosum_M_contig1061.12.2 vs. uniprot
Match: A0A126S4J6_PSEPU (Methyltransferase n=17 Tax=Pseudomonas TaxID=286 RepID=A0A126S4J6_PSEPU) HSP 1 Score: 147 bits (370), Expect = 2.800e-36 Identity = 96/284 (33.80%), Postives = 142/284 (50.00%), Query Frame = 1
Query: 640 VHTGAKYGYGGENALFYEKSRPGYLADALRAIEDEIRRIRKDTTDDSHLLVDLGCGTGKFTREILPFARSEELSVIGIEPVEAMRKQFEAALPGVQVKDGRGDNIPLLNCSARAMIAPQSFHWMSSPETLREVHRVLVPGGLFILVWNTRDGSKSWVRGLEGIIDPCYGTDVPRQHGGTWKRSFQDLEQQSGSGGESARERPRKFFGELVEQHFEHSVFLNKDELNRLVRSLSVVAIRPESEQADASRRIQELIESHPDTRDKLQNTGKVELFYDTEVYWCRRL 1491
VHT A G+ +++ YE+ RP Y + D + D ++DLG GTGKFTR + A + +EPV AMR++F LP V V +G +IPL + S + ++ Q+FHW + LRE+HRVL PGG L+WN RD + WV + II P G D PR H G W+ +F S P+ V + +V L + +RS+S +A P++EQ R+Q+L+++HP L+ +V Y T+ Y C+RL
Sbjct: 4 VHTSASTGFSRQSSN-YEQGRPDYPVALQGWLRDTLG------IDAGTPVLDLGAGTGKFTRLLTALAPR----LTAVEPVAAMRERFHERLPEVPVLEGTAQHIPLADASQQVLVCAQAFHWFADAAALREMHRVLAPGGRLGLIWNVRDETVDWVARITEIITPYEG-DTPRFHTGRWRDAFAG----------SRFSAPQLTTLPHVHEGNPQTVILER------LRSVSFIAALPQAEQDRVMARLQDLVDNHP----ALKGRERVAFPYQTQAYVCQRL 255
BLAST of mRNA_A-nodosum_M_contig1061.12.2 vs. uniprot
Match: UPI0004842FB6 (class I SAM-dependent methyltransferase n=1 Tax=Paraburkholderia ferrariae TaxID=386056 RepID=UPI0004842FB6) HSP 1 Score: 147 bits (370), Expect = 3.740e-36 Identity = 97/280 (34.64%), Postives = 136/280 (48.57%), Query Frame = 1
Query: 640 VHTGAKYGYGGENALFYEKSRPGYLADALRAIEDEIRRIRKDTTDDSHLLVDLGCGTGKFTREILPFARSEELSVIGIEPVEAMRKQFEAALPGVQVKDGRGDNIPLLNCSARAMIAPQSFHWMSSPETLREVHRVLVPGGLFILVWNTRDGSKSWVRGLEGIIDPCYGTDVPRQHGGTWKRSFQDLEQQSGSGGESARERPRKFFGELVEQHFEHS-VFLNKDELNRLVRSLSVVAIRPESEQADASRRIQELIESHPDTRDKLQNTGKVELFYDTEVY 1476
VH A GY A Y + RP Y + + + + +R T +VDLG GTGKFTR ++ S VI IEPV AMR + AALP V V+DG +PL + S A++ Q+FHW ++ L E+HRVL PGG F L+WN RD WV L+ I++ G D PR + G W+ +F P FG L E HF +D + V+S S +A P +QA ++ LI++ P L+ V + Y+T +
Sbjct: 10 VHRAAAVGYSPTAADHYVRGRPDYPPEVAHWLRETLG-LRAGQT-----VVDLGAGTGKFTRRLVETGAS----VIAIEPVAAMRAKLAAALPQVDVRDGAAQAMPLADASVDAVVCAQAFHWFANASALAEIHRVLKPGGRFGLIWNLRDARVDWVARLDAIVNRAEG-DTPRYYTGQWRAAF-----------------PFPGFGPLQEAHFSVGHTGSPEDVIVARVKSTSFIAALPADQQAQIEADVRALIDAEP----TLRGQTTVTVPYETAAF 257
BLAST of mRNA_A-nodosum_M_contig1061.12.2 vs. uniprot
Match: A0A2H5DUM7_CHRS5 (SAM-dependent methyltransferase n=1 Tax=Chromobacterium sp. (strain ATCC 53434 / SC 14030) TaxID=2059672 RepID=A0A2H5DUM7_CHRS5) HSP 1 Score: 145 bits (365), Expect = 1.360e-35 Identity = 101/286 (35.31%), Postives = 140/286 (48.95%), Query Frame = 1
Query: 640 VHTGAKYGYGGENALFYEKSRPGYLADALRAIEDEIRRIRKDTTDDSHLLVDLGCGTGKFTREILPFARSEELSVIGIEPVEAMRKQFEAALPGVQVKDGRGDNIPLLNCSARAMIAPQSFHWMSSPETLREVHRVLVPGGLFILVWNTRDGSKSWVRGLEGIIDPCYGTDVPRQHGGTWKRSFQDLEQQSGSGGESARERPRKFFGELVEQHFEHSVFLNKDELNRLVRSLSV--VAIRPESEQADASRRIQELIESHPDTRDKLQNTGKVELFYDTEVYWCRRL 1491
+H A+ G+ E A YE+ RP Y D + + + D + +DLG GTGKFTR + A V +EPV+ MR + +A LPG++ G ++IPL + S + Q+FHW +S + LRE+HRVL PGG LVWN RD S WV + G++ P G D PR H G W+ F ES+R +F HS + E + RSLSV +A P+ E+ + ++ LI S PD L +V Y TE Y C RL
Sbjct: 4 IHQAARQGFAKE-AQAYERGRPAYSPDLAGWLRESLG------VDAGTVALDLGAGTGKFTRLLAGVAGE----VAAVEPVDQMRAELQAGLPGLKALKGTAESIPLPDASVDVVTCAQAFHWFASEDALREIHRVLKPGGRLGLVWNVRDESCRWVAKITGLLAPYEG-DTPRFHSGRWRLPF-----------ESSR-----YFSAPEPSVLPHS-HIGPPERVIVDRSLSVSFIAALPDDEKRRFAEALRRLIASDPD----LSGREEVAFPYRTEAYRCVRL 256
BLAST of mRNA_A-nodosum_M_contig1061.12.2 vs. uniprot
Match: A0A2R6WAG2_MARPO (Methyltransf_11 domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WAG2_MARPO) HSP 1 Score: 145 bits (366), Expect = 3.210e-35 Identity = 96/293 (32.76%), Postives = 146/293 (49.83%), Query Frame = 1
Query: 613 PCAVARFERVHTGAKYGYGGENALFYEKSRPGYLADALRAIEDEIRRIRKDTTDDSHLLVDLGCGTGKFTREILPFARSEELSVIGIEPVEAMRKQFEAALPGVQVKDGRGDNIPLLNCSARAMIAPQSFHWMSSPETLREVHRVLVPGGLFILVWNTRD-GSKSWVRGLEGIIDPCYGTDVPRQHGGTWKRSFQDLEQQSGSGGESARERPRKFFGELVEQHFEHSVFLNKDELNRLVRSLSVVAIRPESEQADASRRIQELIESHPDTRDKLQNTGKVELFYDTEVYWCRR 1488
P + A +VH A G+ E + YE SRP Y DA+ +E+ + ++ ++DLG G+GKFTR + S+ + +EP +MR F LP V + DG IPL + S A+I Q+FHW + ETLRE+HRVL PGG LVWN D +K WV L + + Y P+ G WK+ +Q E + + F +L + HFEH +D + V S S VA + + +A ++ +++S D + +G ++ Y T+VYWC +
Sbjct: 34 PPSNASAPKVHEVAVKGFDSE-PVAYESSRPSYPEDAVDCLEEHLGLRSGESA-----VLDLGAGSGKFTRLLA----SKNYHLTAVEPSPSMRATFADILPNVPILDGTAFAIPLESASQDAVIVAQAFHWFAQIETLREIHRVLKPGGRLGLVWNLEDRAAKKWVASLRDVYE-MYEMGTPQYRLGLWKKVWQTAEAE-------------ELFSKLEDAHFEHETLCTEDLVWGRVCSKSYVACQSDEVKARLREQVLAILKSADDL--ERDPSGLIKYPYKTDVYWCTK 300
BLAST of mRNA_A-nodosum_M_contig1061.12.2 vs. uniprot
Match: A0A024HP93_PSEKB (Methyltransf_11 domain-containing protein n=2 Tax=Pseudomonas knackmussii TaxID=65741 RepID=A0A024HP93_PSEKB) HSP 1 Score: 144 bits (362), Expect = 3.520e-35 Identity = 104/283 (36.75%), Postives = 138/283 (48.76%), Query Frame = 1
Query: 634 ERVHTGAKYGYGGENALFYEKSRPGYLADALRAIEDEIRRIRKDTTDDSHLLVDLGCGTGKFTREILPFARSEELSVIGIEPVEAMRKQFEAALPGVQVKDGRGDNIPLLNCSARAMIAPQSFHWMSSPETLREVHRVLVPGGLFILVWNTRDGSKSWVRGLEGIIDPCYGTDVPRQHGGTWKRSFQDLEQQSGSGGESARERPRKFFGELVEQHFEHSVFLNKDELNRLVRSLSV--VAIRPESEQADASRRIQELIESHPDTRDKLQNTGKVELFYDTEVY 1476
E VH A+ G+G E A Y RP Y + L + + R T S VDLG GTGKFTR +L V IEPV AMR + LPGV+V +G +PL + S A++ Q+FHW +S LRE+HRVL PGG LVWN RD WV L I+ P G+ PR H G W+R+F FG L + F H + E + R+LS+ +A P ++A +R+ +LI++HP R + Q V Y TE Y
Sbjct: 2 ENVHASARQGFGLE-AQTYAHGRPDYPDELLEWMHE-----RLGITAGSKA-VDLGAGTGKFTRLLL----RSGAEVCAIEPVAAMRDKLAEELPGVRVLEGTAQGMPLADASQDAVLCAQAFHWFASAAALREIHRVLRPGGHLGLVWNVRDERVDWVAELTHIVAPYEGS-TPRFHTGEWRRAFAGAP-----------------FGPLQLREFSHQ-HVGPAEQVIVARTLSISFIAALPAEQKARVEQRLHDLIDNHPALRGQQQ----VAFPYRTEAY 250
BLAST of mRNA_A-nodosum_M_contig1061.12.2 vs. uniprot
Match: UPI001E54566F (methyltransferase domain-containing protein n=4 Tax=Chromobacterium group TaxID=90153 RepID=UPI001E54566F) HSP 1 Score: 142 bits (359), Expect = 9.070e-35 Identity = 98/287 (34.15%), Postives = 143/287 (49.83%), Query Frame = 1
Query: 634 ERVHTGAKYGYGGENALFYEKSRPGYLADALRAIEDEIRRIRKDTTDDSHLLVDLGCGTGKFTREILPFARSEELSVIGIEPVEAMRKQFEAALPGVQVKDGRGDNIPLLNCSARAMIAPQSFHWMSSPETLREVHRVLVPGGLFILVWNTRDGSKSWVRGLEGIIDPCYGTDVPRQHGGTWKRSFQDLEQQSGSGGESARERPRKFFGELVEQHFEHSVFLNKDELNRLVRSLSV--VAIRPESEQADASRRIQELIESHPDTRDKLQNTGKVELFYDTEVYWCRR 1488
+ +H AK G+ E A YE+ RP Y + ++ E+ +R D+ ++DLG GTGKFTR + A V +EPV+ MR Q + LPG++ G IPL + S A+ Q+FHW ++ + LRE+HRVL PGG L+WN RD S WV + ++ P G D PR H G W+R F+ + ++F F HS + E + R LSV +A P+ E+ + ++ LI +HPD R + +V Y TE Y C R
Sbjct: 2 DTLHGQAKAGFAKE-AQAYERGRPEYAPELADWLKRELG-LRLDSA-----VLDLGAGTGKFTRLLATVAGE----VAAVEPVDEMRAQLQTRLPGLRALKGTAGEIPLPDASMDAIACAQAFHWFANEDALREIHRVLKPGGSLGLIWNVRDESCDWVARISELLAPYEG-DTPRFHSGAWRRPFEAV----------------RYFAAPALTMFSHS-HVGPPERVIVDRFLSVSFIAALPDDEKRLFAEALRRLIYTHPDLRGR----DEVAFPYRTEAYRCLR 255
BLAST of mRNA_A-nodosum_M_contig1061.12.2 vs. uniprot
Match: UPI001EFFDFD1 (methyltransferase domain-containing protein n=1 Tax=Methylobacterium sp. SyP6R TaxID=2718876 RepID=UPI001EFFDFD1) HSP 1 Score: 142 bits (359), Expect = 9.070e-35 Identity = 104/286 (36.36%), Postives = 138/286 (48.25%), Query Frame = 1
Query: 640 VHTGAKYGYGGENALFYEKSRPGYLADALRAIEDEIRRIRKDTTDDSHLLVDLGCGTGKFTREILPFARSEELSVIGIEPVEAMRKQFEAALPGVQVKDGRGDNIPLLNCSARAMIAPQSFHWMSSPETLREVHRVLVPGGLFILVWNTRDGSKSWVRGLEGIIDPCYGTDVPRQHGGTWKRSFQDLEQQSGSGGESARERPRKFFGELVEQHFEHSVFLNKDELNRLVRSLSV--VAIRPESEQADASRRIQELIESHPDTRDKLQNTGKVELFYDTEVYWCRRL 1491
+H A G+ A Y + RP Y A AL A E R+ + + DLG GTGKFTR + + V IEPV+AMR Q A+LPGV + G + +PL + S A++ Q+FHW S+ L E+ RVL GG F LVWN RD WV L I++ G D PR H G W+ F P + FG L E F H E L R+LSV +A PE+E+A ++ +++LI P+ L V Y T VYWC R+
Sbjct: 4 LHPAAAGGFSA-GAETYARGRPDYPA-ALSAWLRETLRL-----EPGRSVADLGAGTGKFTRLLA----TTGADVTAIEPVDAMRAQLAASLPGVTARPGSAEAMPLADASLDALVCAQAFHWFSTKAALAEIRRVLKVGGRFGLVWNVRDDGTPWVAELTTIMNAHEG-DAPRYHTGVWRGLF-----------------PAEGFGPLHEASFPHG-HTGTPEQVILDRTLSVSFIAALPEAERAKVAQSVRDLIARTPE----LAGRDAVTFPYRTFVYWCERV 255 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1061.12.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1061.12.2 >prot_A-nodosum_M_contig1061.12.2 ID=prot_A-nodosum_M_contig1061.12.2|Name=mRNA_A-nodosum_M_contig1061.12.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=321bp MHHTRVLHAFAKISLPLPTVTKRPWRVPCAVARFERVHTGAKYGYGGENAback to top mRNA from alignment at A-nodosum_M_contig1061:180179..184999+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1061.12.2 ID=mRNA_A-nodosum_M_contig1061.12.2|Name=mRNA_A-nodosum_M_contig1061.12.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4821bp|location=Sequence derived from alignment at A-nodosum_M_contig1061:180179..184999+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1061:180179..184999+ >mRNA_A-nodosum_M_contig1061.12.2 ID=mRNA_A-nodosum_M_contig1061.12.2|Name=mRNA_A-nodosum_M_contig1061.12.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=963bp|location=Sequence derived from alignment at A-nodosum_M_contig1061:180179..184999+ (Ascophyllum nodosum dioecious)back to top |