mRNA_A-nodosum_M_contig10545.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: M1EYI5_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=Fucales TaxID=3009 RepID=M1EYI5_9PHAE) HSP 1 Score: 318 bits (815), Expect = 3.990e-107 Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 1
Query: 1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 492
MLLTDRNFNTTFFDPAGGGDPVLYQ+LF FFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIATMWGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSGVDIALHDTY
Sbjct: 179 MLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTY 341
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: M1F017_SARFS (Cytochrome c oxidase subunit 1 (Fragment) n=4 Tax=Fucales TaxID=3009 RepID=M1F017_SARFS) HSP 1 Score: 318 bits (814), Expect = 2.270e-106 Identity = 157/164 (95.73%), Postives = 160/164 (97.56%), Query Frame = 1
Query: 1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 492
MLLTDRNFNTTFFDPAGGGDPVLYQ+LF FFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSW+ATMWGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSGVDIALHDTY
Sbjct: 179 MLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWVATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTY 341
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: A0A0U4ZTN0_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=8 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U4ZTN0_9PHAE) HSP 1 Score: 316 bits (809), Expect = 5.170e-105 Identity = 156/164 (95.12%), Postives = 160/164 (97.56%), Query Frame = 1
Query: 1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 492
MLLTDRNFNTTFFDPAGGGDPVLYQ+LF FFGHPEVYILILPGFGIVSHIL+TF+RKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIAT+WGGSIRLKTPMLFAIGFLFLFTIGGLTG VLANSGVDIALHDTY
Sbjct: 131 MLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATLWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANSGVDIALHDTY 293
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: A0A0U1XAH8_SARHM (Cytochrome c oxidase subunit 1 n=118 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XAH8_SARHM) HSP 1 Score: 318 bits (815), Expect = 1.240e-104 Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 1
Query: 1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 492
MLLTDRNFNTTFFDPAGGGDPVLYQ+LF FFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIATMWGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSGVDIALHDTY
Sbjct: 234 MLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTY 396
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: A0A1L6KY02_9PHAE (Cytochrome c oxidase subunit 1 n=1 Tax=Sargassum fluitans TaxID=143163 RepID=A0A1L6KY02_9PHAE) HSP 1 Score: 318 bits (815), Expect = 1.240e-104 Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 1
Query: 1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 492
MLLTDRNFNTTFFDPAGGGDPVLYQ+LF FFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIATMWGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSGVDIALHDTY
Sbjct: 234 MLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTY 396
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: D4HL93_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=24 Tax=Fucales TaxID=3009 RepID=D4HL93_9PHAE) HSP 1 Score: 313 bits (802), Expect = 4.360e-104 Identity = 156/164 (95.12%), Postives = 158/164 (96.34%), Query Frame = 1
Query: 1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 492
MLLTDRNFNTTFFDPAGGGDPVLYQ+L FGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIATMWGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSGVDIALHDTY
Sbjct: 193 MLLTDRNFNTTFFDPAGGGDPVLYQHLXXXFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTY 355
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: D6MQN4_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=15 Tax=Phaeophyceae TaxID=2870 RepID=D6MQN4_9PHAE) HSP 1 Score: 311 bits (796), Expect = 3.530e-103 Identity = 154/164 (93.90%), Postives = 158/164 (96.34%), Query Frame = 1
Query: 1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 492
MLLTDRNFNTTFFDPAGGGDPVLYQ+L FGHPEVYILILPGFGIVSHIL+TFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIAT+WGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSGVDIALHDTY
Sbjct: 193 MLLTDRNFNTTFFDPAGGGDPVLYQHLXXXFGHPEVYILILPGFGIVSHILSTFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATLWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTY 355
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: E6ZES6_ECTSI (Cytochrome c oxidase subunit 1 n=691 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES6_ECTSI) HSP 1 Score: 314 bits (804), Expect = 5.990e-103 Identity = 153/164 (93.29%), Postives = 160/164 (97.56%), Query Frame = 1
Query: 1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 492
MLLTDRNFNTTFFDPAGGGDPVLYQ+LF FFGHPEVYILILPGFGI+SHIL+TF+RKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIAT+WGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSG+DIALHDTY
Sbjct: 235 MLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIISHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATLWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGIDIALHDTY 397
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: A0A453HT52_AEGTS (Cytochrome c oxidase subunit 1 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453HT52_AEGTS) HSP 1 Score: 308 bits (788), Expect = 6.950e-103 Identity = 146/164 (89.02%), Postives = 159/164 (96.95%), Query Frame = 1
Query: 1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 492
MLLTDRNFNTTFFDPAGGGDP+LYQ+LF FFGHPEVYILILPGFGI+SHI++TFSRKPVFGYLGMVYAM+SIG+LGF+VWAHHMFTVGLD+DTRAYFTAAT MIIAVPTGIK FSWIATMWGGSI+ KTPMLFA+GF+FLFTIGGLTG VLANSG+DIALHDTY
Sbjct: 38 MLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAAT-MIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY 200
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: D4HLA4_PETFA (Cytochrome c oxidase subunit 1 (Fragment) n=12 Tax=Ectocarpales TaxID=2877 RepID=D4HLA4_PETFA) HSP 1 Score: 310 bits (794), Expect = 7.100e-103 Identity = 152/164 (92.68%), Postives = 158/164 (96.34%), Query Frame = 1
Query: 1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 492
MLLTDRNFNTTFFDPAGGGDPVLYQ+L FGHPEVYILILPGFGIVSH+LATF+RKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIAT+WGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSG+DIALHDTY
Sbjct: 193 MLLTDRNFNTTFFDPAGGGDPVLYQHLXXXFGHPEVYILILPGFGIVSHVLATFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATLWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGIDIALHDTY 355 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10545.2.1 >prot_A-nodosum_M_contig10545.2.1 ID=prot_A-nodosum_M_contig10545.2.1|Name=mRNA_A-nodosum_M_contig10545.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=167bp MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHIback to top mRNA from alignment at A-nodosum_M_contig10545:14321..14821- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10545.2.1 ID=mRNA_A-nodosum_M_contig10545.2.1|Name=mRNA_A-nodosum_M_contig10545.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=501bp|location=Sequence derived from alignment at A-nodosum_M_contig10545:14321..14821- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10545:14321..14821- >mRNA_A-nodosum_M_contig10545.2.1 ID=mRNA_A-nodosum_M_contig10545.2.1|Name=mRNA_A-nodosum_M_contig10545.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=501bp|location=Sequence derived from alignment at A-nodosum_M_contig10545:14321..14821- (Ascophyllum nodosum dioecious)back to top |