mRNA_A-nodosum_M_contig10520.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10520.2.1 vs. uniprot
Match: D7G477_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G477_ECTSI) HSP 1 Score: 118 bits (296), Expect = 2.480e-27 Identity = 72/131 (54.96%), Postives = 87/131 (66.41%), Query Frame = 1
Query: 214 YSNIFRKVKTNDGYLSGRNAVLLLRKSGLPQETLARVWALADEDTDGRLSVEEFCTAMHLIRCVTSRRLPLPETKSYSRLEKSTPSAQNKEKHRKKRTAWTGRAGEIAAKSPKRRSRMASLLGDDPPSPPP 606
Y+ IF K+ T DGYLSG+ AV+LLRKSG+PQETL++VWALAD D DGRLS++EFCTAMHLI C + LPLPE S R K Q+ K R G+ AKSPKRRSR+ASL+ + PP
Sbjct: 19 YAKIFEKLDTEDGYLSGKRAVVLLRKSGVPQETLSKVWALADSDVDGRLSLKEFCTAMHLIGCFR-KGLPLPEVPS--RKPKKPKKRQSPGGDTKPREGQ-GKREITFAKSPKRRSRLASLVDPHQDANPP 145
BLAST of mRNA_A-nodosum_M_contig10520.2.1 vs. uniprot
Match: A0A8J5X7G7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X7G7_DIALT) HSP 1 Score: 77.4 bits (189), Expect = 1.120e-12 Identity = 44/85 (51.76%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 184 YIMSAEEKANYSNIFRKVKT-NDGYLSGRNAVLLLRKSGLPQETLARVWALADEDTDGRLSVEEFCTAMHLIRCVTSRRLPLPET 435
++MS E A Y F + T G+LSG A LL KSGLP+ETL+R+W L+D D DGRLS EF AMHL T+R PLP T
Sbjct: 165 WVMSDAEAARYDAYFASLDTARTGFLSGAQAAPLLSKSGLPKETLSRIWGLSDADRDGRLSQREFRAAMHLAMR-TARGTPLPAT 248
BLAST of mRNA_A-nodosum_M_contig10520.2.1 vs. uniprot
Match: A0A443HIZ0_BYSSP (Cytoskeletal adapter protein sagA n=2 Tax=Byssochlamys spectabilis TaxID=264951 RepID=A0A443HIZ0_BYSSP) HSP 1 Score: 77.0 bits (188), Expect = 1.440e-12 Identity = 38/84 (45.24%), Postives = 57/84 (67.86%), Query Frame = 1
Query: 184 YIMSAEEKANYSNIFRKVKT-NDGYLSGRNAVLLLRKSGLPQETLARVWALADEDTDGRLSVEEFCTAMHLIRCVTSRRLPLPE 432
++++ +EKA+Y NIF V T G +SG AV + LP+E LA++W LAD D+DG+L+ +EF AMHL+R +R+ PLP+
Sbjct: 293 WLITPQEKAHYDNIFTTVDTAKAGAISGDQAVAFFTNAQLPEEVLAQIWDLADIDSDGQLTPDEFAVAMHLVRGQRARKEPLPQ 376
BLAST of mRNA_A-nodosum_M_contig10520.2.1 vs. uniprot
Match: A0A7S2URG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URG0_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 2.160e-12 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 1
Query: 184 YIMSAEEKANYSNIFRKVKT-NDGYLSGRNAVLLLRKSGLPQETLARVWALADEDTDGRLSVEEFCTAMHLIRCVTSRRLPLP 429
YIM E++ Y +F + + +DGY+ G+ AV L KSGL ++ L VW L DE D RLS EF AMH+I C++ ++LP+P
Sbjct: 152 YIMYPNEQSRYEALFSQYEVKHDGYVYGKEAVALFSKSGLEKDQLRDVWNLVDEPVDNRLSTLEFAIAMHMIVCISKKKLPVP 234
BLAST of mRNA_A-nodosum_M_contig10520.2.1 vs. uniprot
Match: A0A6A5XWB7_9PLEO (Uncharacterized protein n=1 Tax=Aaosphaeria arxii CBS 175.79 TaxID=1450172 RepID=A0A6A5XWB7_9PLEO) HSP 1 Score: 76.3 bits (186), Expect = 2.670e-12 Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 1
Query: 91 NGTRLSPWLKISTSKYGMTTPKDHRFKQDHRYIMSAEEKANYSNIFRKVKT-NDGYLSGRNAVLLLRKSGLPQETLARVWALADEDTDGRLSVEEFCTAMHLIRCVTSRRLPLPET 435
+GTRL +S S+YG T P + +++SA+EK +Y N+F KV T G+++G AV SGL ++ LA +W LAD +++G+LS +EF AM+LIR + LP T
Sbjct: 260 SGTRLQSSSPLSHSQYG-TPPTQSAQATGNDWLISAQEKDSYDNLFSKVDTYGRGFITGEQAVSFFSDSGLAEDVLAGIWDLADINSEGQLSRDEFAVAMYLIRQQRNPGKQLPTT 374
BLAST of mRNA_A-nodosum_M_contig10520.2.1 vs. uniprot
Match: A0A1B7NRA7_9EURO (Uncharacterized protein n=1 Tax=Emergomyces africanus TaxID=1955775 RepID=A0A1B7NRA7_9EURO) HSP 1 Score: 75.1 bits (183), Expect = 6.560e-12 Identity = 49/141 (34.75%), Postives = 76/141 (53.90%), Query Frame = 1
Query: 184 YIMSAEEKANYSNIFRKV-KTNDGYLSGRNAVLLLRKSGLPQETLARVWALADEDTDGRLSVEEFCTAMHLIRCVTSRRLPLPETKSYSRLEKSTPSAQNKEKHRKKRTAWTGRAGEIAAKSPKRRSRMASLLGDDPPSPP 603
+ ++ +EKA++ +F + K N GY++G AV + LP+ETLA +W LAD D+DG+LS +EF AM+L+R + R PLP+ + + S +R A G A +I ++ +RS L G D PP
Sbjct: 323 WTITPQEKAHFDTVFTTIDKANLGYITGDQAVEFFTNAQLPEETLASIWDLADIDSDGQLSKDEFAVAMYLVRQQRTTREPLPQALPPALIPPSM-----------RRQAAPGPAPQIVPQNTAQRSAAEDLFGLDVFGPP 452
BLAST of mRNA_A-nodosum_M_contig10520.2.1 vs. uniprot
Match: C4JMM6_UNCRE (Uncharacterized protein n=1 Tax=Uncinocarpus reesii (strain UAMH 1704) TaxID=336963 RepID=C4JMM6_UNCRE) HSP 1 Score: 74.7 bits (182), Expect = 8.830e-12 Identity = 37/84 (44.05%), Postives = 58/84 (69.05%), Query Frame = 1
Query: 184 YIMSAEEKANYSNIFRKV-KTNDGYLSGRNAVLLLRKSGLPQETLARVWALADEDTDGRLSVEEFCTAMHLIRCVTSRRLPLPE 432
++++ +EK ++ +IF + K GYLSG +AV + LP+ETLA++W LAD D+DG+LS +EF AM+L+R + R PLP+
Sbjct: 278 WLITPQEKGHFDSIFNTIDKRRVGYLSGDDAVGFFANAQLPEETLAQIWDLADIDSDGQLSKDEFAVAMYLVRQQRTTREPLPQ 361
BLAST of mRNA_A-nodosum_M_contig10520.2.1 vs. uniprot
Match: C1HBG2_PARBA (EF hand domain-containing protein n=5 Tax=Paracoccidioides TaxID=38946 RepID=C1HBG2_PARBA) HSP 1 Score: 73.9 bits (180), Expect = 1.620e-11 Identity = 37/84 (44.05%), Postives = 56/84 (66.67%), Query Frame = 1
Query: 184 YIMSAEEKANYSNIFRKV-KTNDGYLSGRNAVLLLRKSGLPQETLARVWALADEDTDGRLSVEEFCTAMHLIRCVTSRRLPLPE 432
+ ++ +EKA++ +F V K N GY++G AV + LP+ETLA +W LAD D+DG+LS +EF AM+L+R + R PLP+
Sbjct: 287 WTITPQEKAHFDTVFTSVDKANLGYITGDQAVEFFTHAQLPEETLASIWDLADIDSDGQLSKDEFAVAMYLVRQQRTTREPLPQ 370
BLAST of mRNA_A-nodosum_M_contig10520.2.1 vs. uniprot
Match: A0A1J9QKE5_9EURO (Uncharacterized protein n=1 Tax=Emergomyces pasteurianus Ep9510 TaxID=1447872 RepID=A0A1J9QKE5_9EURO) HSP 1 Score: 73.9 bits (180), Expect = 1.620e-11 Identity = 37/84 (44.05%), Postives = 56/84 (66.67%), Query Frame = 1
Query: 184 YIMSAEEKANYSNIFRKV-KTNDGYLSGRNAVLLLRKSGLPQETLARVWALADEDTDGRLSVEEFCTAMHLIRCVTSRRLPLPE 432
+ ++ +EKA++ +F V K N GY++G AV + LP+ETLA +W LAD D+DG+LS +EF AM+L+R + R PLP+
Sbjct: 286 WTITPQEKAHFDTVFATVDKANLGYITGDQAVEFFTNAQLPEETLASIWDLADIDSDGQLSKDEFAVAMYLVRQQRTTREPLPQ 369
BLAST of mRNA_A-nodosum_M_contig10520.2.1 vs. uniprot
Match: A0A2B7YQH5_9EURO (Uncharacterized protein n=1 Tax=Polytolypa hystricis UAMH7299 TaxID=1447883 RepID=A0A2B7YQH5_9EURO) HSP 1 Score: 73.9 bits (180), Expect = 1.630e-11 Identity = 37/84 (44.05%), Postives = 57/84 (67.86%), Query Frame = 1
Query: 184 YIMSAEEKANYSNIFRKV-KTNDGYLSGRNAVLLLRKSGLPQETLARVWALADEDTDGRLSVEEFCTAMHLIRCVTSRRLPLPE 432
++++ +EK ++ +F V K N GY++G AV + LP+ETLA++W LAD D+DG+LS EEF AM+L+R + R PLP+
Sbjct: 284 WLITPQEKTHFDTVFTTVDKQNLGYITGDLAVEFFTNAQLPEETLAQIWDLADIDSDGQLSKEEFAVAMYLVRQQRTTREPLPQ 367 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10520.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10520.2.1 >prot_A-nodosum_M_contig10520.2.1 ID=prot_A-nodosum_M_contig10520.2.1|Name=mRNA_A-nodosum_M_contig10520.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=231bp LGRLDWTKKLYTTTSHGPRYCTTVATRILANGTRLSPWLKISTSKYGMTTback to top mRNA from alignment at A-nodosum_M_contig10520:3682..4507- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10520.2.1 ID=mRNA_A-nodosum_M_contig10520.2.1|Name=mRNA_A-nodosum_M_contig10520.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=826bp|location=Sequence derived from alignment at A-nodosum_M_contig10520:3682..4507- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10520:3682..4507- >mRNA_A-nodosum_M_contig10520.2.1 ID=mRNA_A-nodosum_M_contig10520.2.1|Name=mRNA_A-nodosum_M_contig10520.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=693bp|location=Sequence derived from alignment at A-nodosum_M_contig10520:3682..4507- (Ascophyllum nodosum dioecious)back to top |