mRNA_A-nodosum_M_contig1049.6.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1049.6.2 vs. uniprot
Match: A0A6H5LNE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNE9_9PHAE) HSP 1 Score: 399 bits (1026), Expect = 5.050e-127 Identity = 176/290 (60.69%), Postives = 224/290 (77.24%), Query Frame = 1
Query: 559 GEGPYRIRYVALIAERHSGSTWMYHFLKDFFKPKKVFVTSTLCTWKHWFQDRIHADIQAKRRPCRKAQQCPACLDIQHTLVIVMWRNPYDWIGAMQKTPHHSKAHFGIQDTSEFMTKRWMLTSKNERAARADALVKAENKAPCMDNFLPSEVVPCRQNDRSAIYELDENGEAYGNVYELRKAKIRDFNAVQKWAPYYEKILYEDMLVGNQLQEWLRLLDTKYGLRGDYEHVPGAALSSKMSLSGSYMYYLNSETCAPHCAMGGPEGERARTTLHAMWDDQLEEGLGYHRV 1428
G GP +I+Y++LI ERHSG+TWM FL+D+F+ K + VT+TLCTWKHWFQDRI+ DIQ +R CR+ QQCPAC DI HTLV+ MWRNPYDW+ M K P H++AH I D S+FMT W++ ++ E+ AR +AL++ +++ PC+DNFLP EV+PCR D SAIYELD GEAYGN+YELRKAKIRDF+AV+ WAPYYEKILYEDML + L+ WL LDT YGL G+Y+ VP +AL+ KM S MYY+NS+ CAPHC MGG G A T++ +WD++LEE LGYH+V
Sbjct: 94 GVGPLKIKYISLIGERHSGTTWMVKFLQDYFRDKDITVTATLCTWKHWFQDRIYQDIQDGKRLCREGQQCPACKDINHTLVVAMWRNPYDWVSGMHKIPWHAQAHASIPDMSKFMTMPWIMGAEEEKQARKEALIRTKDELPCIDNFLPWEVLPCRPGDESAIYELDPGGEAYGNIYELRKAKIRDFDAVKMWAPYYEKILYEDMLAKDGLKMWLMSLDTLYGLGGNYKSVPDSALAVKMESSRKQMYYMNSQHCAPHCKMGGVAGRSALETMNRLWDEELEEDLGYHQV 383
BLAST of mRNA_A-nodosum_M_contig1049.6.2 vs. uniprot
Match: D8LAU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU0_ECTSI) HSP 1 Score: 385 bits (988), Expect = 2.370e-122 Identity = 170/290 (58.62%), Postives = 212/290 (73.10%), Query Frame = 1
Query: 559 GEGPYRIRYVALIAERHSGSTWMYHFLKDFFKPKKVFVTSTLCTWKHWFQDRIHADIQAKRRPCRKAQQCPACLDIQHTLVIVMWRNPYDWIGAMQKTPHHSKAHFGIQDTSEFMTKRWMLTSKNERAARADALVKAENKAPCMDNFLPSEVVPCRQNDRSAIYELDENGEAYGNVYELRKAKIRDFNAVQKWAPYYEKILYEDMLVGNQLQEWLRLLDTKYGLRGDYEHVPGAALSSKMSLSGSYMYYLNSETCAPHCAMGGPEGERARTTLHAMWDDQLEEGLGYHRV 1428
GEG + IRY++++AERHSGS W FL+++F+ K V VT TLCTWKHWFQDRIH D+Q +RPCR QQCPACLD +HTLV+VMWRNPYDWI M PHH+KAH G+QD +FMT W++ + PC+DNFLP+EV+PC++NDRS+IYELD +G AYGN+YELRKAKI DFNAV+ W P+YEK++YEDMLVG L++WLR L+TKYGL G+Y VP L + M+ MYY NSE CAP+C MGG G A LH MWD++LE G+GYH+V
Sbjct: 36 GEGAHHIRYISVVAERHSGSRWFTGFLREYFRDKDVMVTPTLCTWKHWFQDRIHQDVQDGKRPCRGNQQCPACLDTEHTLVVVMWRNPYDWISGMHSNPHHAKAHRGVQDLEQFMTMPWIMGPE----------------LPCIDNFLPNEVLPCKENDRSSIYELDRDGRAYGNIYELRKAKILDFNAVETWVPFYEKVVYEDMLVGPGLRDWLRSLETKYGLVGNYMDVPDNVLQTNMARLWRNMYYTNSEHCAPNCTMGGVTGATAVEALHQMWDEELESGIGYHKV 309
BLAST of mRNA_A-nodosum_M_contig1049.6.2 vs. uniprot
Match: D8LAT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT9_ECTSI) HSP 1 Score: 379 bits (972), Expect = 6.000e-120 Identity = 168/290 (57.93%), Postives = 212/290 (73.10%), Query Frame = 1
Query: 559 GEGPYRIRYVALIAERHSGSTWMYHFLKDFFKPKKVFVTSTLCTWKHWFQDRIHADIQAKRRPCRKAQQCPACLDIQHTLVIVMWRNPYDWIGAMQKTPHHSKAHFGIQDTSEFMTKRWMLTSKNERAARADALVKAENKAPCMDNFLPSEVVPCRQNDRSAIYELDENGEAYGNVYELRKAKIRDFNAVQKWAPYYEKILYEDMLVGNQLQEWLRLLDTKYGLRGDYEHVPGAALSSKMSLSGSYMYYLNSETCAPHCAMGGPEGERARTTLHAMWDDQLEEGLGYHRV 1428
G+ + IRY+++++ERHSG TWM FL ++F+ K V VT TLCTWKHWFQDRIH D+Q +RPCR QQCPACLD +HTLV+VMWRNPYDWIG M PHH+KAH G+QD +FMT W++ + PC+DNFLP+EV+PC++N RS+IYELD +G AYGN+YELRKAKI DFNAV+ W P+YEK++YEDMLVG L++WLR L+TKYGL G+Y VP L + M+ S MYY NSE CAP+C MGG G A LH MWD++LE G+GY++V
Sbjct: 39 GDRAHHIRYISVVSERHSGFTWMTSFLWEYFRDKDVMVTPTLCTWKHWFQDRIHQDVQDGKRPCRGNQQCPACLDTEHTLVVVMWRNPYDWIGGMHSNPHHAKAHRGVQDLEQFMTMPWIMGPE----------------LPCIDNFLPNEVLPCKENGRSSIYELDRDGRAYGNIYELRKAKILDFNAVETWVPFYEKVVYEDMLVGPGLRDWLRSLETKYGLVGNYMDVPDNVLQTNMARLWSNMYYTNSEHCAPNCTMGGVTGATAVEALHQMWDEELESGIGYNKV 312
BLAST of mRNA_A-nodosum_M_contig1049.6.2 vs. uniprot
Match: D7FTA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA1_ECTSI) HSP 1 Score: 274 bits (700), Expect = 1.730e-81 Identity = 134/252 (53.17%), Postives = 160/252 (63.49%), Query Frame = 1
Query: 559 GEGPYRIRYVALIAERHSGSTWMYHFLKDFFKPKKVFVTSTLCTWKHWFQDRIHADIQAKRRPCRKAQQCPACLDIQHTLVIVMWRNPYDWIGAMQKTPHHSKAHFGIQDTSEFMTKRWMLTSKNERAARADALVKAENKAPCMDNFLPSEVVPCRQNDRSAIYELDENGEAYGNVYELRKAKIRDFNAVQKWAPYYEKILYEDMLVGNQLQEWLRLLDTKYGLRGDYEHVPGAALSSKMSLSGSYMYYLNS 1314
GEGP+ I+Y++LIAERHSGSTWM FL +F+ V VT TLCTWKHWFQDRIH DIQ +RPCR+ QQCPACLD +HTLV+ MWRNPYDWI MQ PHH+KAH G+QD SE+MT W++ KNE AR DAL+KA+ +A KI DFNAV+ W P+YEKI EDML G L +WLR L+TKYGL G+Y V +AL M+ S S+MYY NS
Sbjct: 20 GEGPHHIKYISLIAERHSGSTWMTGFLSRYFRHSDVKVTPTLCTWKHWFQDRIHQDIQDGKRPCREHQQCPACLDTEHTLVVAMWRNPYDWISGMQSNPHHAKAHRGVQDLSEYMTMPWIMQPKNEERARKDALIKAKEEA-----------------------------------------KILDFNAVETWVPFYEKIADEDMLDGETLGDWLRSLETKYGLVGNYIDVLDSALGESMAHSRSHMYYTNS 230
BLAST of mRNA_A-nodosum_M_contig1049.6.2 vs. uniprot
Match: D8LB15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB15_ECTSI) HSP 1 Score: 183 bits (464), Expect = 2.210e-49 Identity = 79/134 (58.96%), Postives = 100/134 (74.63%), Query Frame = 1
Query: 553 PGGEGPYRIRYVALIAERHSGSTWMYHFLKDFFKPKKVFVTSTLCTWKHWFQDRIHADIQAKRRPCRKAQQCPACLDIQHTLVIVMWRNPYDWIGAMQKTPHHSKAHFGIQDTSEFMTKRWMLTS--KNERAAR 948
P G GP I+Y++LI ERHSG+TWM FL+D+F+ K + VT+TLCTWKHWFQDRI+ DI +RPCR+ QQCPAC DI HTLV+ MWRNPYDWI M K P H++AH I D S+FMT W++ + ++ R AR
Sbjct: 2 PTGVGPLEIKYISLIGERHSGTTWMVKFLQDYFRDKDITVTATLCTWKHWFQDRIYQDIHDGKRPCREGQQCPACKDINHTLVVAMWRNPYDWISGMHKIPWHAQAHASIPDMSKFMTMPWIMGAEVRDHRRAR 135
BLAST of mRNA_A-nodosum_M_contig1049.6.2 vs. uniprot
Match: A0A7S3UU09_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU09_HETAK) HSP 1 Score: 144 bits (363), Expect = 8.060e-34 Identity = 105/303 (34.65%), Postives = 147/303 (48.51%), Query Frame = 1
Query: 577 IRYVALIAERHSGSTWMYHFLKDFFKPKKVFVTSTLCTWKHWFQDRIHADIQAKRRPCRKAQQCPACLDIQHTLVIVMWRNPYDWIGAMQKTPHHSKAHF-----GIQDTSEFMTKRWMLTSKNERAARADALVKAENKA---PCMDNFLPSEV-VPCRQNDRSAIYELDE-----NGEA--YGNVYELRKAKIRDFNAVQKWAPYYEKILYEDMLVGNQ--LQEWLRLLDTKYGLRGDYEHVPGAALSSKMSLSGSYMYYLNSETCAPHCAMGGP--EGERARTTLHAMWDDQLEEGLGYHR 1425
IR +ALIAERHSGSTW++ L++ F V V ++C +KHWFQDR + + +R C K C CL+ + T++ +WRNPYDWI A+ + P HS +H G D F+ K W K AR L K KA PC+DNF +++ C + SAIYE NG Y E+R AKIRDF +V KWAP + + YE +L G L+++ + ++ L E L + + S Y + C P A + + D Q E LGYH+
Sbjct: 64 IRRIALIAERHSGSTWLFKVLQEAFPG--VQVQQSVCMYKHWFQDRHREETISGKRGCSKGY-CFPCLNPESTIIFNLWRNPYDWIVALNEIPWHSISHGYYSKKGHIDFIAFVNKEW----KVHGPARQYMLKKQGKKALQAPCLDNFQKNDLDFVCSK--ASAIYETTAGDPHYNGTQSYYAGPLEMRAAKIRDFMSVGKWAPNFYTVTYEALLFGGYDGLRDYFDAVAQRHNLTHHPEKYRELVLPTSRNKLLSTFYGSGGKKCNQKILAKCPLIANPAALQAVQSKIDHQAERLLGYHK 357
BLAST of mRNA_A-nodosum_M_contig1049.6.2 vs. uniprot
Match: A0A7S0G6T5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G6T5_9STRA) HSP 1 Score: 105 bits (263), Expect = 3.570e-21 Identity = 76/262 (29.01%), Postives = 123/262 (46.95%), Query Frame = 1
Query: 586 VALIAERHSGSTWMYHFLKDFFKPKKVFVTSTLCTWKHWFQDRIHADIQAKRRPCRKAQQCPACLDIQHTLVIVMWRNPYDWIGAMQKTPHHSKAHFGIQDTSEFMTKRWMLTSKNERAARADALVKAENKAPCMDNFLPSEVVPCRQ------------NDRSAIYEL--DENGEAYGNVYELRKAKIRDFNAVQKWAPYYEKI---LYEDML---VGNQLQEWLRLLDTKYGLRGDYEHVPGAALSSKMSLSGSYMYYLN 1311
++L+ ER++G+ W+ L F K ++ L WKHWFQD D R Q TLVI M+RNPY+W+ AM+KTPHHS +H ++ F+TK W +T +D + C + F +V+ C++ + IYE+ D +G+ + N+ E+R AKI + VQ+W P+ + YED+L GN +++ L+ G+ + P K LS ++ Y++
Sbjct: 59 ISLLGERNTGTNWVTALLSKCFPGIKT--SARLVRWKHWFQD---DDSNENER--------------QKTLVIAMFRNPYEWVMAMRKTPHHSPSHLRLK-WQNFVTKPWTMTRPE-----SDLVFSNSTGQICHEKFAYKDVISCQRQPPELMSSTGGYSSGKPIYEMRHDGSGKPFANILEMRAAKIHNHLGVQEW-PWISGVHVVRYEDLLEDGTGN----FIKNLEKLTGVTASCKAEPPQPKRKKRKLSKEFVKYIS 290
BLAST of mRNA_A-nodosum_M_contig1049.6.2 vs. uniprot
Match: A0A7S1Y240_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y240_9STRA) HSP 1 Score: 106 bits (264), Expect = 5.910e-21 Identity = 87/281 (30.96%), Postives = 130/281 (46.26%), Query Frame = 1
Query: 553 PGGEGPYRIRYVALIAERHSGSTWMYHFLKDFFKPKKVFVTSTLCTWKHWFQDRIHADIQAKRRPCRKAQQCPACLDIQHTLVIVMWRNPYDWIGAMQKTPHHSKAHFGIQDTSEFMTKRWMLTSKNERAARADALVKAENKAPCMDNFLPSEVVPC--------------RQNDRSAIYEL--DENGEAYGNVYELRKAKIRDFNAVQK-------WAPYYEKILY---EDMLVGNQLQEWLRLLDTKYGLRGDYEHVPGAALSSKMSLSGSYMYYLNSE 1317
P + P I+ ++++ ER+SG+ W+Y L F + + V L +KHWFQ + + P TLVI +RNPYDW+ A++ PHHS AH G++ EF+TK W ER + KA C ++F E+V C R ++ YEL D +GE +GN+ E+R AKIR+F V+ W YE +L E +L ++++EW G + E VP A K LS ++ +LN E
Sbjct: 91 PAPKRPKPIQQISILGERNSGTRWLYGHLGSCFN-QSLGVKRYLTRYKHWFQ-------------YKNTTKYP-----HDTLVIASFRNPYDWLEALRNVPHHSPAHIGLK-WEEFLTKPWT----TERVGLDLNISKAVR---CQEDFPYDEIVSCVLEPLPKEAFDHKLRYSENQPFYELKPDGSGEPFGNIMEMRAAKIRNFLGVRDYPGVADVWTVQYEYLLSRGTEHLL--SKIEEWT-------GTKRHCEAVP-AQERRKRPLSRTFAKFLNKE 334
BLAST of mRNA_A-nodosum_M_contig1049.6.2 vs. uniprot
Match: A0A7S2E1N5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E1N5_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.880e-18 Identity = 77/240 (32.08%), Postives = 114/240 (47.50%), Query Frame = 1
Query: 586 VALIAERHSGSTWMYHFLKDFFKPKKVFVTSTLCTWKHWFQ-DRIHADIQAKRRPCRKAQQCPACLDIQ----HTLVIVMWRNPYDWIGAMQKTPHHSKAHFGIQDTSEFMTKRWMLTSKNERAARADALVKAENKAPCMDNFLPSEVVPC---------------RQNDRSAIYEL--DENGEAYGNVYELRKAKIRDFNAVQ--KWAPYYEKILYEDMLVGNQLQEWLRLLDTKYGLR 1233
VA++ ER SG+TW+Y L + F V + L +KHWFQ D D + LD + ++LVI M+RNPYDW AM + PHH+ AH + EF+TK W ER + + EN C D F EVV C R ++ +YE+ D +GE Y N+ ++R KIR+F V+ K + YED+L +E+L+ ++ G++
Sbjct: 59 VAILGERSSGTTWIYEHLTECF-AHGVPIRRRLEKYKHWFQVDEERDDYKG--------------LDFETYPTNSLVISMFRNPYDWTTAMHRVPHHAPAHIDLP-WKEFLTKAWT----TERVGKDLNITDKENFL-CQDKFKYHEVVSCIHKPMGDEYWKDKKTRFSEHQPVYEMKNDGSGEPYDNILDMRADKIRNFLTVKDFKRITDFWVYKYEDLLADGT-EEFLQKIEKATGVK 276
BLAST of mRNA_A-nodosum_M_contig1049.6.2 vs. uniprot
Match: A0A7S1VY01_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VY01_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 2.840e-18 Identity = 73/240 (30.42%), Postives = 109/240 (45.42%), Query Frame = 1
Query: 586 VALIAERHSGSTWMYHFLKDFFKPKKVFVTSTLCTWKHWFQDRIHADIQAKRRPCRKAQQCPACLDIQHTLVIVMWRNPYDWIGAMQKTPHHSKAHFGIQDTSEFMTKRWMLTSKNERAARADALVKAENKAPCMDNFLPSEVVPC---------------RQNDRSAIYEL--DENGEAYGNVYELRKAK------IRDFNAVQK-WAPYYEKILYEDMLVGNQLQEWLRLLDTKYGLR 1233
VA++ ER SG+TW+Y L + F V + L +KHWFQ+ + ++LVI ++RNPYDW+ AM + PHHS +H + EF+TK W ER D + C +NF EVV C R ++ +YEL D +GE Y N+ ELR AK ++DF + W YE +L E +++LR ++ G++
Sbjct: 191 VAILGERSSGTTWIYEHLTECFNHS-VPIKRRLNRYKHWFQEDSNYP--------------------SNSLVIAIFRNPYDWMEAMHRVPHHSPSHMDLS-WKEFLTKTWT----TERVGH-DLNITDTKSVVCQENFQYHEVVSCIHKPMGQEYWEGKKTRFSEHQPVYELKHDGSGEPYDNIMELRAAKNVNFMEVKDFKRITDFWVYKYESLLKEGT------EDFLRRIEEATGVK 397 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1049.6.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1049.6.2 >prot_A-nodosum_M_contig1049.6.2 ID=prot_A-nodosum_M_contig1049.6.2|Name=mRNA_A-nodosum_M_contig1049.6.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=469bp MRRSALRTLLLSIIVVGVIVASCLMLSRKEEINSLAGLRVHHAETMAEQTback to top mRNA from alignment at A-nodosum_M_contig1049:89437..101150- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1049.6.2 ID=mRNA_A-nodosum_M_contig1049.6.2|Name=mRNA_A-nodosum_M_contig1049.6.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=11714bp|location=Sequence derived from alignment at A-nodosum_M_contig1049:89437..101150- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1049:89437..101150- >mRNA_A-nodosum_M_contig1049.6.2 ID=mRNA_A-nodosum_M_contig1049.6.2|Name=mRNA_A-nodosum_M_contig1049.6.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1407bp|location=Sequence derived from alignment at A-nodosum_M_contig1049:89437..101150- (Ascophyllum nodosum dioecious)back to top |