mRNA_A-nodosum_M_contig1048.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1048.2.1 vs. uniprot
Match: PRXV_ASCNO (Vanadium-dependent bromoperoxidase n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=PRXV_ASCNO) HSP 1 Score: 129 bits (325), Expect = 8.500e-34 Identity = 61/65 (93.85%), Postives = 62/65 (95.38%), Query Frame = 1
Query: 1 RATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPGVNYLVDFDEWLNIQNGGPPVGPEELDD 195
RATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAP VNY+VDFDEWLNIQNGGPP GPE LDD
Sbjct: 196 RATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPDVNYMVDFDEWLNIQNGGPPAGPELLDD 260
BLAST of mRNA_A-nodosum_M_contig1048.2.1 vs. uniprot
Match: O82433_FUCDI (Vanadium bromoperoxidase n=1 Tax=Fucus distichus TaxID=3012 RepID=O82433_FUCDI) HSP 1 Score: 128 bits (322), Expect = 3.930e-33 Identity = 58/65 (89.23%), Postives = 63/65 (96.92%), Query Frame = 1
Query: 1 RATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPGVNYLVDFDEWLNIQNGGPPVGPEELDD 195
RATFVGVETGPF+SQLLVNSFTID+ITVEPKQETFAP +NY+VDFDEWLNIQNGGPP GPEELD+
Sbjct: 315 RATFVGVETGPFVSQLLVNSFTIDAITVEPKQETFAPDLNYMVDFDEWLNIQNGGPPAGPEELDE 379
BLAST of mRNA_A-nodosum_M_contig1048.2.1 vs. uniprot
Match: Q4LDE6_9PHAE (Vanadium-dependent iodoperoxidase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q4LDE6_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 7.550e-22 Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 1
Query: 1 RATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPGVNYLVDFDEWLNIQNGGPPVGPEELDD 195
R++ GVETGPFISQLLV FTIDSITV P Q+TFAPG +Y+ D+DEWL+IQNGG P +LDD
Sbjct: 251 RSSAFGVETGPFISQLLVKDFTIDSITVTPMQKTFAPGADYMTDYDEWLSIQNGGSPDSEADLDD 315
BLAST of mRNA_A-nodosum_M_contig1048.2.1 vs. uniprot
Match: A0A3G3BM28_SACJA (Vanadium-dependent iodine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM28_SACJA) HSP 1 Score: 95.1 bits (235), Expect = 2.650e-21 Identity = 45/64 (70.31%), Postives = 53/64 (82.81%), Query Frame = 1
Query: 1 RATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPGVNYLVDFDEWLNIQNGGPPVGPEELD 192
R++ VGVE GP +SQLLVN+FTIDSITVE KQ TFAPG +Y+ +FDEWL+IQNG PV PE LD
Sbjct: 244 RSSAVGVEIGPHVSQLLVNNFTIDSITVEAKQNTFAPGEDYMAEFDEWLSIQNGEFPVEPEILD 307
BLAST of mRNA_A-nodosum_M_contig1048.2.1 vs. uniprot
Match: B7ZGM6_9PHAE (Putative vanadium-dependent iodoperoxidase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM6_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 1.840e-18 Identity = 42/65 (64.62%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 1 RATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPGVNYLVDFDEWLNIQNGGPPVGPEELDD 195
R + GVETGPFISQLLV FTIDSITV P Q+TF PG +Y+ D+DEWL IQNGG P + L D
Sbjct: 250 RTSAFGVETGPFISQLLVQDFTIDSITVAPIQKTFEPGADYMADYDEWLFIQNGGVPDHDDVLFD 314
BLAST of mRNA_A-nodosum_M_contig1048.2.1 vs. uniprot
Match: UPI00187FF134 (vanadium-dependent haloperoxidase n=1 Tax=unclassified Nodularia TaxID=2656917 RepID=UPI00187FF134) HSP 1 Score: 66.6 bits (161), Expect = 2.780e-11 Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 1
Query: 1 RATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPGVNYLVDFDEWLNIQNG-GPPVGPEELD 192
R + G GP+ISQ L+ S+T+ +Q+T P +NYL D+D+WLN+QNG P+G ++ D
Sbjct: 201 RGNYAGDLVGPYISQFLLKDIPYGSLTISQRQKTVLPDINYLTDYDDWLNVQNGDSDPIGKDKFD 265
BLAST of mRNA_A-nodosum_M_contig1048.2.1 vs. uniprot
Match: A0ZCI9_NODSP (Uncharacterized protein n=2 Tax=Nodularia spumigena TaxID=70799 RepID=A0ZCI9_NODSP) HSP 1 Score: 66.2 bits (160), Expect = 3.790e-11 Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 1 RATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPGVNYLVDFDEWLNIQNGG 165
R + G GP+ISQ L+ S+T+ +Q+T P +NYL D+DEWLN+QNGG
Sbjct: 198 RGNYAGDLVGPYISQFLLKDIPYGSLTISQRQKTVQPDINYLTDYDEWLNVQNGG 252
BLAST of mRNA_A-nodosum_M_contig1048.2.1 vs. uniprot
Match: UPI0013E8E755 (NTTRR-F1 domain n=1 Tax=Longirhabdus pacifica TaxID=2305227 RepID=UPI0013E8E755) HSP 1 Score: 64.7 bits (156), Expect = 1.330e-10 Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 1
Query: 1 RATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPGVNYLVDFDEWLNIQNGGPPVGPEELD 192
R + G GP+ISQ L + S T E + T PG N+L D+ EWLN+QNG PP PE+ D
Sbjct: 345 RGSTPGDLKGPYISQFLFQDIPMGSATFEQRYRTTLPGTNFLTDYKEWLNVQNGEPPSFPEQFD 408
BLAST of mRNA_A-nodosum_M_contig1048.2.1 vs. uniprot
Match: UPI0019EFA36E (Vanadium-dependent haloperoxidase n=1 Tax=Nostocales cyanobacterium LEGE 11386 TaxID=1828825 RepID=UPI0019EFA36E) HSP 1 Score: 63.5 bits (153), Expect = 3.390e-10 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 1 RATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPGVNYLVDFDEWLNIQNGGPPVGPEELD 192
R + G GP+ISQ L+ S+T+ +QET V+Y+ ++DEWLN+QNGG VG ++ D
Sbjct: 216 RGNYAGDLVGPYISQFLLKDIPYGSLTISQRQETVVANVDYMTEYDEWLNVQNGGS-VGQDKFD 278
BLAST of mRNA_A-nodosum_M_contig1048.2.1 vs. uniprot
Match: A0A2R5FTI7_NOSCO (Twin-arginine translocation pathway signal n=1 Tax=Nostoc commune NIES-4072 TaxID=2005467 RepID=A0A2R5FTI7_NOSCO) HSP 1 Score: 60.5 bits (145), Expect = 3.960e-9 Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = 1
Query: 1 RATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPGVNYLVDFDEWLNIQNGG 165
R G GP+ISQLL+ S+T+ KQ+T +NYL D++ WLNIQNGG
Sbjct: 198 RGIHTGDLVGPYISQLLLKDIPFGSLTISQKQKTVQRDINYLTDYETWLNIQNGG 252 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1048.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1048.2.1 >prot_A-nodosum_M_contig1048.2.1 ID=prot_A-nodosum_M_contig1048.2.1|Name=mRNA_A-nodosum_M_contig1048.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=65bp RATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPGVNYLVDFDEWLNback to top mRNA from alignment at A-nodosum_M_contig1048:66057..66830+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1048.2.1 ID=mRNA_A-nodosum_M_contig1048.2.1|Name=mRNA_A-nodosum_M_contig1048.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=774bp|location=Sequence derived from alignment at A-nodosum_M_contig1048:66057..66830+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1048:66057..66830+ >mRNA_A-nodosum_M_contig1048.2.1 ID=mRNA_A-nodosum_M_contig1048.2.1|Name=mRNA_A-nodosum_M_contig1048.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=195bp|location=Sequence derived from alignment at A-nodosum_M_contig1048:66057..66830+ (Ascophyllum nodosum dioecious)back to top |