|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Model size | 676 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 342 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866423.4085314-UTR-A-nodosum_M_contig10477:2387..2621 | 1680866423.4085314-UTR-A-nodosum_M_contig10477:2387..2621 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig10477 2388..2621 + |
| 1680866423.4942315-UTR-A-nodosum_M_contig10477:10223..10247 | 1680866423.4942315-UTR-A-nodosum_M_contig10477:10223..10247 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig10477 10224..10247 + |
| 1680866423.5049698-UTR-A-nodosum_M_contig10477:11378..11454 | 1680866423.5049698-UTR-A-nodosum_M_contig10477:11378..11454 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig10477 11379..11454 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866423.462045-CDS-A-nodosum_M_contig10477:2621..2794 | 1680866423.462045-CDS-A-nodosum_M_contig10477:2621..2794 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10477 2622..2794 + |
| 1680866423.4771385-CDS-A-nodosum_M_contig10477:9248..9324 | 1680866423.4771385-CDS-A-nodosum_M_contig10477:9248..9324 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10477 9249..9324 + |
| 1680866423.485614-CDS-A-nodosum_M_contig10477:10130..10223 | 1680866423.485614-CDS-A-nodosum_M_contig10477:10130..10223 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10477 10131..10223 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10477.1.2 >prot_A-nodosum_M_contig10477.1.2 ID=prot_A-nodosum_M_contig10477.1.2|Name=mRNA_A-nodosum_M_contig10477.1.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=114bp
MRRVYPRVDYTQAPWTVRQPSQSIHTSWDVSSAVPYSLPLHGRRGKGMAE SFSREKLSAGALRETILFSNCQHQRDVVNFISQILSTRHSLRNIRVFFCL HPTKRWPSSLTWT* back to topmRNA from alignment at A-nodosum_M_contig10477:2388..11454+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig10477.1.2 ID=mRNA_A-nodosum_M_contig10477.1.2|Name=mRNA_A-nodosum_M_contig10477.1.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9067bp|location=Sequence derived from alignment at A-nodosum_M_contig10477:2388..11454+ (Ascophyllum nodosum dioecious) CGCACATAAGTTCGATCTCTCGAATTCGTGCCCACAGGCGCACCATAACC
TTTCAATACCATCGCAACATCCGTTTTTAAAAAAACTGAATGAAGACAGA
ACGACCAGACCTACGTTGCTTGAACTGGACAAGAGACCGAGGCAGCACTT
TCCTGGTAGATAGGAGATGAATGTCGTACCGGTGACTACTGGAGGCGAGA
TCAGAGTGAAGATGACTTCGCGAGGTTCAAGTGGATGCGGCGCGTGTATC
CCCGAGTTGACTACACGCAGGCACCGTGGACGGTTAGGCAGCCGAGCCAA
AGCATCCACACTTCATGGGATGTTTCGTCGGCCGTTCCGTATTCCTTACC
ACTTCACGGTCGACGAGGGAAAGGAATGGCTGAATCCTTCTCGCGAGAAA
AATTAAGGCAAGCACCGCAGAAATGTGGATGGAAAATTTTGTGTTACCTT
GTTCCTGTGTGACCCGGCTGGTACGTCGATTGAAGTCCAGAATGAATgGG
AAGAAAacACACACACACACACACCAGTACGTCtTTTCGTGGGCTCCTCC
CTTTGTTGCCGACACAGCAGAAGTGGTATCATCATCTGCATCAATTACAG
AATTTGATTGCACATAACTATTACAACGCGCCGGTCGCCCCAGTAGCTGA
GAGGTACCACGTAACCCTTGACATGTTGGGACGTGAGTTCGATCCCGGCA
AACGGGATTTTTTCTCACTAAAAAAACTAAAAAGAAACAAAAAAAATGCC
CACAACGGGTTGTTGTTGTCTTCACATTAAAAGCCGTTCCGGTCTCTATT
CAGTACTTTCTAACATCCGTACTGGTCCAACTGACGCGGACGCCTTCCGT
GGTCACAGGCTAACTACCCAGAAAGGGTACACATATCAGAAAGAAATAAA
AGGACCCAGAAAAGTCAACACACGCGATAATTTGAAAATAAAATAAAACC
CCCAGAAAAATAAGTCTCCAGACAGTCAGACGTCGCAGGTGACATGTCAG
ACAAAGAAGATAGATAGAGCCCTTCGCTCTCACTCGACACGCGAGGCCAA
GCAAAATGAAACAAACAAAAAGAATCAAGGATCACCAATCAAGACAATAA
AATCGCATGATTCTATCCTTGTACCCCTACTAGGCCGGGGTGTATTCACC
GCCGGGTTTGCACCGCCCAGGCCATTCCCTACACCTACCTACAAATGTGT
GGGGGGCTCAAGATCACGAGAGTCCCGTTTGGTCGCACGTCGTCGGCTGG
CCTCCTCTTCTTCCTTGTGCCAGAGGCCATGAACTTTTCCGCTCCCTGCA
ACACCCCTTGTGCCACGGCGCCCCATCGTCCATCTTCGCCGCAAGGGTCC
ATACGGCTCTGTCGCCCGAATGTGAGCCGGTTGTCCACCGTAGAGCCGTC
TGTGGCTCCGAACGCTTGGAAGTCGTCCTTGAGACAATCCATCCAATTTT
GCTCTGGGCGTCCCTTTCCTGGATCTTCCCCCGACGAGTTTTCCGTCCAT
CAGCCGCTTCCGGAGGCGCCCGGCGGGTTGTCTGGCCATGGCTCCCGCGA
ACAGAAGTCGCCGTTGTCGAATGGTAGCTTCACGCTTTGGCACCTAGTCT
TCTTGAGGGCCTGAGCGTACGAAAGCTGTCGGCAGGTGCCGCGCTCGCGC
CGGTACCCGATAACTCGCAGGAGTAGTCGGTGGTGTGTCCTCCGCAGTAA
CCGGTAAGTGTTCGCGGCGGGGGGCCCACGTCATGGACCCGTATTGTAGG
GCCTCCATCGCCTCCGCTCTCAACAGTCGAACCTTGAGTCTCCACGGTGC
TCTCGGCCGGTCGAAGAGCTCCCGGGAGAACCTCCTGATGCATGCCCACG
CTGCTCTGCTCCGGTGGTTGATCTCTTGCGTGAGTTCGCCATCTTCGTTG
ACAAGGCCGCCCAAGTATCGGAACTGGGTGGTCTGGGCGCTACTTTGCCC
TGCTGCTTCGATGACAAGTGGTGGTGGCGGCGATCCCCCTTTCTTCGGTT
GTTTCTCCGGCGCCCGCATCAAGAGAGTCTCTGTCTTCTTCTCCGACACT
GTCAGACCAAATTCCCCAAACACTTCCACGATAGTGGTCATCATTCTCGC
CAACCCTTCTTGGGATCTCGATACGACGCCGGCGTCGTCGGCATAGAACA
ATTCAATCGTTAATACACAAAATTCGACTTCACAGTCGACGAGGGAAAGG
AATGGCTGAATCCTTCTCGCGACAAAAGTTAAGGCACGCACCGCAGAAAG
AAGGTGGATGAAAAGTCCTCTTATGACCTTCCTCCTGTGTGACCCCGGCT
GGTACGTCCAACGAACTTGATGTCCAGAATGAATGGGAAGAAAACACACA
CAACACACACACATACTGGTACAACATACGGAGTATACGTTGGTGTACCA
TCAAACTGTAGGTAGCGCACACACCCTTGCTGTAACTGAATTGTTTACAT
ACGTACAGCAGTCTGGACTTGTTTTGAGCATTGTTGTTTTCATCTAAATT
CTGGGATTCTGGGACAGTACATCCCGATATCGTTCACCGAAACAGAAGGC
ACTATTAATAGGTCCTGTCACCTGTCACAGTCAACGGTTTGAGACGAGTT
TGTTGAGAAAAGTGCCAGGTAATTGCTATAACAAGGTGCCTATTTATTCT
AGTCGAAGTGCGCTCCCCACAATACAGCAAACCTGGCGGTCTCAAACAAG
TTTCTTCTGTTACAGCCTCCTGTCTTCGAATGATACGACGAGTTTGTTGA
AAAGTGCCAGCAAATTGCTATAACAAGGTGCCTATTTATTCTAGTCGAAG
TGCGCTCCCCACAATACAGCAAACCTGGCGGTCTCAAACAAGTTTCTTCT
GTTGTAGCCTCCTGTCTTCGAATGATACGTACCGGAAGCAGGTTTTCCCT
CATCTGCGGCGCACAGCGACACGACCAGCTGTTCCAGACTACAACCAGCT
TTCACAGTTCCGTTGAACTCCGCAAAGCGCTTGGTACAACATGACCCCGT
GTAACGATACGACATGCTGCATGCATTCGTTGTGGTTGGTTTTCTCTCGA
TGCATCCGTTCGCCCGAGTCTGATAGAAATATCGCCAGGGCAAAGTACTG
TATCCGAAAACAGCAGTACACAAGTATAGGGACGTATACTGAATCTAAGA
CGTCTTCGTGAAAGCCGTACCGGCAGACAAACCTATTGCAATTCCGGGGA
GCCGACAGAGTATCGAAACCGCACACATGAGCAAAATTTTACCTCTACCT
CTGATCTAATAGAACAGTGGAGCGAGTCTGAAGCAGTGGAATTTTGGCAC
CAGCAAACGACAATGACATCGGTGCGGCGTCTGTCTGTAGTGAAAAACTT
ATACAGTAGTATTAACGCATTCTTGCCAAGGTGTGCTTGTGTCCATCCAT
CGACAATGCGTAAACAAGAAGAAACCTCGACATTGGTTGGTGTCTACGCG
TCATTGGTAAAGTAGTACTACTACTGTAGAGCTCCAGCTCGTCTGCGCTT
GCATACCTCGCCCTCTTAATTTGAAAAATAAGTTGCCATTTCCATTGGGT
AATTTCATTTTTGAATCTCCCCCGAATAGCCAAGCAAGATTAGACAGACT
AATTGTAAAACGGTTTTGGGCCATTTTCGTTCCAAGTTTTTCGTTCATAC
GAGTCGGCCTTAGATTCCATAAATCTGAAATCGAATTCTCAGAAGAAAAA
TGCAGAAATCGGGCGACAGCGAGCAGTTCTGGAAAATAGGCACCCGATTT
CCTCAGAGATCAAGCTCTCTTGAAATTTTCATCTTCAGCCTTTTTTCTTT
GCCAAGTATATTTGTAACGCATCTAGACCATTCACACATTCAGCGAATTG
TCCTTTCAACTGAAGGAACTACGGTGACACAACAAATCAAAGTCAGCCAT
AGACCTATCAAATGCCAATCCCACTTGTGGTCACAAAGATGTACGAAAAT
GCGTCAACGGGTCACATGGTGACAACCCGCTACTCAAACCCTAAAAGGAT
CCAAACCGCGACAAAATTCCTGCCAGGTCTAACCAACCGAGAACATCGAA
AACTTGTTGGCGTCAAGGCGATATCTTGGGTACGAACCACAGTCTCCACT
GTTTGGAGTGCTACCAACCAGTATTTCAAAATTTGAATTAGATCCTACAA
AGACTTTTCTGATACGCTGCCGATCAAAAGTGATACAAAAGTTTCTATTA
AATAGCTCTTGGGAGTTACAAGAAGACAAGTCATGCGACATTTTACTAGC
AATTGCAGCGACCAATGTCGAAACGGTTCACCAAACCCCCTACTGTACCT
TATTCCATATCGAGAGCATCCTCGATCAACTCGGATTGCTGTCGCCTGCC
TACCCACCGCCAGCGTTCTCAGCAACAAAGCGGACAAATTACGCTTCAAT
CAGTTTTGATCAACAAGCCCAAGTTTTTGACCTTTCAGAGAGGGCGGGAA
GGGCTATATTTTTCTTAAAACAAATTTAAACACGTATGATAAGTCTGAAA
GACACACAAACACGTACTGAATAGATGACACGGTAAAAAGTTCATTTTCT
TGTTTTGTTTGGGTGTCCAAACATGGCGATTGATTCAAGTGTACAGTATA
ACGGTGGGTTTCTCCCCGGTATTAAAACTCTTGACTCAATTTTACTACCA
TCCGGGAAAGAGGATTGGTCTTTGCAGCCTATGATCCACCTAAACGTGAC
ATTATCCCCCTGAATGGGGGATGCTCAGAAGATCTAGATGCGTTCAGATT
TTTCTTTTAAAAAAACGCAACACCAGACAAAGACTGTATACATGGCATCT
GCAAACAAACAAAAAACGCTCGGAGGATGCTAAATCGCACCAATTATATG
GTATGTACAAATTAATTTTCCCCCATTCCCCGTTCGAGCCTGAGAATTTG
GTCTCGCGAGACGGGTTCGGCTGCCCCGTTCCGCTCATCCTAATACTCAG
GCTGAATCTGGTGCTTCGCTTAATCTCTGCGTTCCTCCCTTCATAAGATA
TCGCGTCAGACCGTCTCTTCATGGGCTTGGAATTGGAACTTCGTCATTCT
TAGAATTGAACAAATCATTTAGTCAGCAATTTAATGTAATCATTTAGTCA
GCCAAGTTCCAATAATGATGAAAGTAGTTTAGAGGTGCCGAGCAGGTAGG
CTTGCTGCGTTAATTTTAAAATTCAAATGAGATGCCAAAAATAGACTGTC
GTACGGCGGTCCATTTATTGCAATGTATGTATGTATGGTCACATCATCAC
ATATAGTAGGTAAGGATCAACCGCGTGAGGTTTCAATCCTGCTCGTGGTC
AGCTAAACAAGGAAAATTAGATATTTCCCCGTCCCCGTTCGCGCCTGAGA
ATTTGGTCTCGCGAGACGCAGGCCCGTCCCGCGTCACCCTGCTTACCCCA
TACTCAGGCTAAATCTGGTGCTTACTTAGGGGATTCCTACCGAATTCCGC
GGCGACGTCCATCTATTTATACCGCCATACGCCATCGGGTCAGGCCCGAG
TTTATCGTATCACGCAAATGCGTACAGATGGCGTTGACTGCCGAGAGTTC
GCCGGCACAGGGCCAGGAAACCTCAAGGTAGTTCCGAACAGGTGCTGCCT
CGGCAGGTCACGATGGACCAATTAGCATGCGCCTCTCTTTTGTGAATATC
TCCCTCTCCCCGTTCGCGCCTGAGAATTTGGTCTCGCGAGACGTCCTTGT
CCCCGCGTCAGCCTGATCTCCTTTTGATTGTGAACTAAGTCAAATAATTC
ATAATGTTGAAAAGAGAAAGTAACTCAGTTGGTAGAGTGCTGGTGTCTAC
ACTCAAGCTGAATCTGATGGTTACTTGACACGCAGTCGGGCCAGTCCTGA
GTTTATCGGGTCACGCGATTGCGTACCGATGGCGTTGACTGCCGAGAGTC
CGCCAGCACAGGGCCAGTAGGTCTCAAGAATAACGGGTGCTATCTTTGCT
TTGCAGGTCACTGCAGACCATTTGATGCGCGCGCCTCTCTTTTCCCACTG
TTGTGTACCTCCTTCGGTATGTATGTCCGTTCATGTATGGAAGTATAAAT
GGCCATCACATAAAGCAAGGGCAAGGATCAACCAGTAAGGTTGCCAATCC
TGCTCGTGGTCAGTTGAATAGGGAAAATTAATACTCCCCTGTCCCCGATC
GCGCCTGAGAATCTGGTCTCGTGAGATCGGTTCGGCTGTCCCGTCCCGCG
TCAGCCTACTCATCTCCATACTCAGGCTGAATCTTGTCGGTGTGCCCTAT
GTGAAAAACTTTCGTCACAGCCCTGCTTCAGCAGCACACGGTCATTGTTC
GTGCGGTGGGTGAGACGAGCGACTACTTGTTCCCTCGCTCATTTTAAAGT
TCATATGTGATGTCAAAAACAGACTGCTGTACGGTGCATCTATTTTAGAT
AGACCGATTGCGTACAGAGCGCCATCCGGGCATTTGGCATTGCGGGGGAT
TGGAACGCGACGGCATTAAAGGCTGAGTGAGGTGGGGGTTAGGGTTGAGA
TGGTCACGGAGGGTGGCGACATCCAGACTCCCTGTTGCAAAGCCAATCAA
ATCAATCCAGATACAATACAATACCGGTACTGTACACACGATGCCGCTGA
AATTGACAAAGAACCAAATAGAGTACAGATTCAAGCCCCTTGATAATGTT
CCGCGCCGCCCCCACTTGTCTTGTACTTGTAGTCAGCAGTTCATTTTACC
TTAACCTGAGATGGAGGTTCCTCGGCACGGCTGCAATGTTGTTGATCTGT
CTATAACATAAAACCAAGTAATTTACATTGTTTTCGTTCCCCTGGCACGC
TGtTTTTCCACTTTCTTGTCTCCTGTTCTCCAAACATGCCCTGGTCTGGT
CGCCGAACAAGCGCTGGAGCGCTCAGGGAAACAATACTGTTTAGTAATTG
TCAGCACCAACGTGATGTCGTCAACTTCATAAGCCAGGCACGGGGGATAC
TTTTTGCATTAGACTAGAATGGCGATACAGATAATAATAAACCTTGTACT
ATAATACTGCTGTATTACTTGTTATTAGATTTTTGTGAGGTACGCTAGCC
TCTTGGTAGGACAAAAAAAAAGCTTGTGTATGTGATGTGACTGCGACCAT
CTGGTTGGGCGCCTCTCAATGCGAGGTCTCGATAGACACCGGAAGTCGTG
AATCCTCACATCGCTGGCCAAGTCTGTTTGAGTGGTGCTTGTGGGCCGAT
GACTCTCTCATTTGGTTCATGCGTGCTGTTTGACACGACTTTTGCCAATA
CGCCAACGTGACTTTATGTCTTGACATTTGTCTGCGACGGCGACCCTTGC
GGTCGGATACAGTTCAAGGATGGCATAGTCACGTGTCCTGCTAAGAGCGA
TTGATAAATAGGAGAGTCAGTTTTTTTTACTTAGCACTAATACTATTCTG
TGTGGTCATCGGGTGACACTGGTCGAAATAAGAGCGAGCGATCAGTGAGA
ACAGTGGTAGGTTCGTTTGCGGTTTGCTAGATTCAGGCGGATACCTACTA
TACTATAATAACTCCCACATTCAAAAGGAAATTGCGTACCGTACTTTTCA
AGCCAAAAATATGTAAAGCCCATGGGATCGAGAGGACATTTGATTTGACA
CCTGTATAGCTCAGCGGCAGCGCCACGACTGTATATCTATATAATAGTAT
ATGCCCAGGCTTGGTACACTAGTCTACGGCTGTAGGTGCTCACATCGTTC
GTCGCGACGAAGTGTGACCCCTCTTGCAAATTCACTATCACAGATCTTGT
CAACACGGCATTCGCTACGGAACATCCGCGTCTTCTTTTGTCTTCATCCG
ACCAAGCGATGGCCGAGTAGCTTGACCTGGACATGAGACCCAAGGCTTGC
TTCTCGTAAGGTATGAATTATAACAAGGATGTACATTACTGGCCATTAGT
AATGTTGAGTAAGTAATGTTTTGACAAGTAATGTTTGAAGCGGCCAGTAA
CGTTGGGCCCGAAAAGGCCCCTAAAAAATCCCGATATTGTTTTGTGGAAA
CCCCTATTTGTGGGGCACCAGAGACAGCACACACAGCAATCATCGCGTGG
AATCCGGACTCTGTAGAATCAGACGGTTTCCTCGGAAGCGGGGAGGGCGA
GGACAACCCTGACTCAGAAGATTATGACTTCGAATAGCGTGTAATCTTGT
ACCTTTATTCTTTAGTTATACTTTAGTGCTTTTGTCCCTTTATACTTTTT
GTTTTTGTTTTTGGTCCATAGTACTTCAGTAACTCAGTATATTAGTTTTG
GGTTGGACACCTTCGGCGCATGGCTTTCGGTTTCTGTTTACGCTTTGGAC
AGTGGCGATGCAGTGTGGAGGGTGGAGCATCGTATATGTAAAAACAAAAA
CACACGCCGTGGACGAGACGAAGGTGTCCAGCAGAAAGAGCTGTGTGTGC
AACAGAGGGAAGTCAATGATGTTGCGATGTTACTTCAGTGGAAGCCCGTA
TGTTCATGTAAATCCACATATCTTTTTTCAGTATTTTTTGTCTTGTACAT
CCACCCaAAAAAAAGTTGCACATCGAAGGGAGCCACAGaaaaAAAAAAAT
CACGTGCGTACATGCGCATAAAAAAATGCACATGGAAAGGAGTTCCACAT
CGCCGGCGCCAGCATGTCCGATCTGGCCGCTAATGTCAGTTAAGTAACGT
TTTTCCCATAACTGAGGCATTACTCAGTAAGTAATGTGTCCCAAACCAAG
TAATGTACATCCTTGCTATTCAAAGGTACAATACCGGTACTGTACAGACG
ATGCCGCTGAAATTGACAATGGACGAAATTCCGCGCCGCCCCCACTTGTC
TTGTACTTGTAGTCAGCAGTTCATTTTACCTTAACCTGAGATGGAGGTTC
CTCGGCACGGCTGCAATGTTGTTGATCTGCCTATAATATAAAACCAAGTA
ATTTACATTGTTTTCGTTCCCCTGGCACGCTGTTTTTCCACTTTCTTGTC
TCCTGTTCTCCAAACATGCCCTGGTCTGGTCGCCGAACAAGCGCTGGAGC
GCTCAGGAAAACAATACTGTTTAGTAATTGTCAGCACCAACGTGATGTCG
TCAACTTCATAAGCCAG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig10477:2388..11454+ >mRNA_A-nodosum_M_contig10477.1.2 ID=mRNA_A-nodosum_M_contig10477.1.2|Name=mRNA_A-nodosum_M_contig10477.1.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=342bp|location=Sequence derived from alignment at A-nodosum_M_contig10477:2388..11454+ (Ascophyllum nodosum dioecious) ATGCGGCGCGTGTATCCCCGAGTTGACTACACGCAGGCACCGTGGACGGT TAGGCAGCCGAGCCAAAGCATCCACACTTCATGGGATGTTTCGTCGGCCG TTCCGTATTCCTTACCACTTCACGGTCGACGAGGGAAAGGAATGGCTGAA TCCTTCTCGCGAGAAAAATTAAGCGCTGGAGCGCTCAGGGAAACAATACT GTTTAGTAATTGTCAGCACCAACGTGATGTCGTCAACTTCATAAGCCAGA TCTTGTCAACACGGCATTCGCTACGGAACATCCGCGTCTTCTTTTGTCTT CATCCGACCAAGCGATGGCCGAGTAGCTTGACCTGGACATGA back to top
|