mRNA_A-nodosum_M_contig1047.3.3 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1047.3.3
Unique NamemRNA_A-nodosum_M_contig1047.3.3
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: D7FLU2_ECTSI (OTU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLU2_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 6.250e-83
Identity = 202/333 (60.66%), Postives = 226/333 (67.87%), Query Frame = 3
Query:  201 GYQTVEEVKARHKKELKALEGSGRKLLKQANKNKAKVMEAESKIAKMDAEIKERHRRELEAAGPEASETIPDPARAGGDGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDQKKTKAXXXXXXXXXXARDLXXXXX------------------IEREKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPFLPFLEGVEKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGENYDGSPLRLTYHEHYYALGAHYNSVVPS 1145
            G ++V+EVKARHKKE+KAL+G+GRKL+KQANKN                          E    EA+E       A GDG            XXXXXXXXXXXXXXXXXXXXX       D     + XXXXXXXXX    XXXXX                  I +EK EGGPDPRIVEM+ L  QVAPRG RVSEIKADGHCLYRAVA+QLSL+GRRP LTEESY LMRQEAARELRSSP +YLPF   L+G+E+GE F++YC  VEGSAEWGGQVELQAL  ALRVPMEV SA+SPPLL+G+ YDG PL LTYHEHYYALG+HYNSVVP+
Sbjct:    3 GSESVDEVKARHKKEIKALDGTGRKLIKQANKNXXXXXXXXXXXXXXXXXXXXXXXXXXE----EATEA------AAGDGDVDDASESAAKSXXXXXXXXXXXXXXXXXXXXXSEVDGVADGVGAMSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRIAKEKEEGGPDPRIVEMDVLKTQVAPRGFRVSEIKADGHCLYRAVADQLSLTGRRPGLTEESYPLMRQEAARELRSSPSEYLPF---LDGLEEGEEFDKYCVKVEGSAEWGGQVELQALCSALRVPMEVFSAMSPPLLLGQGYDGPPLLLTYHEHYYALGSHYNSVVPA 322          
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: A0A835Z5X2_9STRA (OTU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5X2_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.500e-42
Identity = 90/174 (51.72%), Postives = 123/174 (70.69%), Query Frame = 3
Query:  651 KAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPE------LTEESYLLMRQEAARELRSSPEDYLPFLPFLEGVEKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSP-PLLMGENYDG---SPLRLTYHEHYYALGAHYNSVVP 1142
            +A  GPD R VE+EAL A + PRGL V+ I++DG+CLYRAVA QL+++    +        E+ +  +R+ AA  LR   E    F+PF+E  ++G A+E YC  VEGSAEWGG+VEL+ALS+ALRVP+EV SA +  P+++GE  +G   +PLR++YH+HYYALG HYNSVVP
Sbjct:  150 RAAAGPDARTVELEALSANLLPRGLAVAPIRSDGNCLYRAVAHQLAVAAHGGDGAAAAAAAEDGHAGLRRVAAAHLR---EHAAEFMPFVEACDEG-AYEAYCALVEGSAEWGGEVELRALSRALRVPIEVWSAAAAQPMVVGEGEEGGAAAPLRVSYHQHYYALGEHYNSVVP 319          
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: A0A4D9CYR4_9STRA (OTU domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYR4_9STRA)

HSP 1 Score: 154 bits (390), Expect = 3.790e-39
Identity = 134/340 (39.41%), Postives = 180/340 (52.94%), Query Frame = 3
Query:  174 DSISPEHD-DGYQTVEEVKARHKKELKALEGSGRKLLKQANKNKAKVMEAESKIAKMDAEIKERHRRELE--AAGPEASETIPDPARAGGDGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRD----------QKKTKAXXXXXXXXXXARDLXXXXXIEREKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPFLPFLEGVEKGEA--FEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMG-ENYD-GSPLRLTYHEHYYALGAHYNSVVP 1142
            ++ SPE   DG +T EEV+ RHK E++ LEG  R LLK+A   K K  E + ++A+M+ +++ERH REL   AA P            GG+G                                        D          +K+ KAXXXXXXXXXX    XX   + +E   G    R +EM  + + ++P GLRV E+ ADGHCLYRAVA QL   G    +  + Y  +R+ AA+ + S PED   FLPFL G E+GE    E Y   VE +AEWGG++E++AL  A + P+ V +A  P  ++G E+YD   PL L+YH H+YALG HYNSVVP
Sbjct:    5 EASSPEETVDGAETEEEVQKRHKAEVRQLEGKTRALLKKAP--KPKKAEVQGEVARMERDMEERHARELGKFAAAPNGGRN------EGGNGGGLDSKEVRFAPLTSGSKNGRQEGGEGRGKEGEGGSEEEEDGGATAAEKVARKRDKAXXXXXXXXXXXXXXXXARALAKE---GVISLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQG----IPSQGYPEVRRSAAQHILSHPED---FLPFLAGGEEGEGAGLEAYVHAVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPIYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSVVP 326          
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: W4FCW5_9STRA (OTU domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCW5_9STRA)

HSP 1 Score: 153 bits (386), Expect = 5.570e-39
Identity = 79/160 (49.38%), Postives = 110/160 (68.75%), Query Frame = 3
Query:  675 RIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPF--LPFLEGVEKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGENY---DGSPLRLTYHEHYYALGAHYNSVV 1139
            R +E +A+ AQ+   GL V EI +DGHC+Y AVA+QL L+ R P  + ++Y+ +RQ+ A  LRS  +D++PF  L +   +   + FE YC  VE +A+WGGQVEL+AL++AL VP+EV SA S  L+MG+ Y   D  PLRL+YH HYY LG H+NS+V
Sbjct:  125 RQIESDAIAAQLTSLGLIVKEIPSDGHCMYHAVADQLKLTRRLPFPSSDAYIPLRQKTAAYLRSHADDFVPFVELDYASDIAIQDQFESYCARVEATADWGGQVELRALAQALAVPIEVYSASSSVLVMGDEYHREDQPPLRLSYHLHYYTLGEHFNSIV 284          
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: A0A7S4B021_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B021_CHRCT)

HSP 1 Score: 154 bits (390), Expect = 8.590e-39
Identity = 82/167 (49.10%), Postives = 104/167 (62.28%), Query Frame = 3
Query:  639 IEREKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPFLPFLEGVEKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGENYDGSPLRLTYHEHYYALGAHYNSVV 1139
            I  EKA  GP  R VE E L A++ P GL V E+ ADGHCLYR+VA+QL  SG   +  +      R+ AA  +R+ P+D++P+LP   G       + YC  VE S+EWGGQ+E+ ALS A R  + V SA  PPLL GE Y G+PL L YH HY+ LG HYNS+V
Sbjct:  207 IAEEKAASGPSARAVETERLMAKLEPLGLAVQEVPADGHCLYRSVADQLQRSGDAADFQQ-----CRRLAAEYIRTHPDDFMPYLP---GEAGATTIDAYCAQVESSSEWGGQLEITALSHACRRCVAVYSADGPPLLTGEQYAGAPLTLAYHRHYFGLGEHYNSLV 365          
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: A0A6G0X599_9STRA (OTU domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X599_9STRA)

HSP 1 Score: 150 bits (379), Expect = 4.920e-38
Identity = 100/317 (31.55%), Postives = 154/317 (48.58%), Query Frame = 3
Query:  207 QTVEEVKARHKKELKALEGSGRKLLKQANKNKAKVMEAESKIAKMDAEIKERHRRELEAAGPEASETIPDPARAGGDGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDQKKTKAXXXXXXXXXXARDLXXXXXIEREKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPF--LPFLEGVEKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGENYDG---SPLRLTYHEHYYALGAHYNSVVP 1142
            +TV + K RHK EL+A + S + L+K+         E ESK+ +M+ EIK RH  EL+    + + T                                                  RD+KK +           +RD+                 R +E + +  ++    + + E+ +DGHC+Y A+A+QL      P ++ ES++ +R   A+ LRS   D+LPF  L +   V   + FE+YC+ VE S++WGGQ+EL+AL++AL +P+EV SA +  + MGE +     +PLRL+YH HYY+LG HYNSVVP
Sbjct:    2 ETVGQAKQRHKLELRAWQSSQKALVKKWKSENMSKKEIESKLVEMENEIKVRHDTELDNISKQTAST-----------------------DEPEIKLAEVIVEKATSTAKLDKAQRKRDKKKQEEKARQERIANESRDIV--------------SKRQIECDQIADKLKALNMAIKEVPSDGHCMYHAIADQLKRMDFLPHMSMESHVYLRLRTAKYLRSHANDFLPFVELNYESDVSNEDQFEEYCKRVEESSDWGGQIELRALAQALELPIEVHSATTDVIKMGEEFSKIGEAPLRLSYHLHYYSLGEHYNSVVP 281          
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: A0A7S0I6F7_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6F7_9EUKA)

HSP 1 Score: 146 bits (369), Expect = 5.520e-38
Identity = 84/168 (50.00%), Postives = 108/168 (64.29%), Query Frame = 3
Query:  648 EKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPFLPFLEGVEKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGENY--DGSPLRLTYHEHYYALGAHYNSVVPS 1145
            EKA  GP  R +EM  L  Q+ P G +++EI ADGHCLYRAVA+QL   G   E  EE Y   R+ AA  +RS P D++P++   EG++ G     Y Q VEGS EWGGQ+E+ AL+ A +  + V SAV+P L+ GE Y  +G  L L YH+HYY LG HYN+VVPS
Sbjct:   16 EKAGAGPSQRELEMAQLEQQLQPLGRQIAEIAADGHCLYRAVAQQLMQHG--SEGVEEDYSGCRRLAAAYMRSHPGDFMPYVA-AEGMDMG----TYTQQVEGSNEWGGQLEITALAHARKRTIAVFSAVAPLLVTGEEYADNGPRLELCYHKHYYGLGEHYNAVVPS 176          
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: W7U3S7_9STRA (Ovarian tumor, otubain n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3S7_9STRA)

HSP 1 Score: 149 bits (375), Expect = 8.440e-38
Identity = 115/330 (34.85%), Postives = 160/330 (48.48%), Query Frame = 3
Query:  174 DSISPEHD-DGYQTVEEVKARHKKELKALEGSGRKLLKQANKNKAKVMEAESKIAKMDAEIKERHRRELE--AAGPEASETIPDPARAGGDGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDQKKTKAXXXXXXXXXXARDLXXXXXIEREKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPFLPFLEGVEKGEA--FEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMG-ENYD-GSPLRLTYHEHYYALGAHYNSVVP 1142
            ++ SPE   DG +T EE++ RHK E++ LEG  R LLK+A   K K  + + ++A+M+ +++ERH REL   AA P                                                       R+ ++  A           RDL                    EM  + + ++P GLRV E+ ADGHCLYRAVA QL   G    +  + Y  +R+ AA+ + S PED   FLPFL G E+GE    E Y   VE +AEWGG++E++AL  A + P+ V +A  P  ++G E+YD   PL L+YH H+YALG HYNSVVP
Sbjct:    5 EASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAP--KPKKADVQGEVARMERDMEERHARELGKFAAAPNGG----------------------------------------------------REAEEEAARALAKEGVVSLRDL--------------------EMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQG----IPSQGYPEVRRSAAQYILSHPED---FLPFLAGGEEGEGAGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSVVP 253          
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: A0A1Y1HXK5_KLENI (OTU (Ovarian tumor)-like cysteine protease n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HXK5_KLENI)

HSP 1 Score: 152 bits (384), Expect = 8.550e-38
Identity = 116/329 (35.26%), Postives = 163/329 (49.54%), Query Frame = 3
Query:  207 QTVEEVKARHKKELKALEGSGRKLLKQANKNKAKVMEA-----ESKIAKMDAEIKERHRRELEAAGPEASETIPDPARAGGDGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDQKKTKAXXXXXXXXXXARDLXXXXXIEREKA-----EGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPFLPFLEGVEKGEA---FEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGENYDGS---PLRLTYHEHYYALGAHYNSVVPS 1145
            +T EEV ARH+KE+KAL+G   +L KQA K      +A     + +IAK+DA +K+R  +EL A G    E      +   D                                        + QK+              RD      +ERE+       G    R++E + L  +++P GL + EIK DGHCLYRAV +QL L G+   L ++ YL +R+ AA  +R+  +D+LPF+       +G+    FE YC+ VE +A WGGQ+EL AL+ ALR  + V SA  P + MG+ Y+     PLRL+YH H Y LG HYNSVVP+
Sbjct:   88 ETREEVLARHRKEIKALQGKEIELKKQAAKGSKAAQKAAKHAVDEQIAKLDASLKKRQAKELAALGFGEKEAESAEGKKPDD--------------------MDTLIRAIAGTSVGPQRGPSKAQKR--------------RDAKMKQEVEREQRIQQEQSGVVSERVIENQRLAEKLSPLGLALKEIKPDGHCLYRAVEDQLQLQGQPSNLIQD-YLSLRKLAAVYMRAHKDDFLPFVTEHATEHEGDPDAQFEAYCKEVEETATWGGQLELGALAHALRQHISVYSASLPVVEMGKEYERGATQPLRLSYHHHAYGLGEHYNSVVPA 381          
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: A0A024UJP0_9STRA (OTU domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJP0_9STRA)

HSP 1 Score: 147 bits (372), Expect = 4.920e-37
Identity = 115/319 (36.05%), Postives = 173/319 (54.23%), Query Frame = 3
Query:  207 QTVEEVKARHKKELKALEGSGRKLLKQANKNKAKVMEAESKIAKMDAEIKERHRRELEAA--GPEASETIPD--PARAGGDGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDQKKTKAXXXXXXXXXXARDLXXXXXIEREKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPF--LPFLEGVEKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGENYDG---SPLRLTYHEHYYALGAHYNSV 1136
            ++V ++K RHK EL+ L+G  + L K+  K+     E E ++A+++     RH  EL+      + SE  PD  PA A                                           R +K  + XXXXXXXXXX +D          +++     R +E++A+  Q+    L + EI +DGHC+Y AVA+QL L+GR   +T+ +YL +RQ+ A  +R+  +D+LPF  L +  GV   + F+ YC+ VE S++WGGQ+EL+AL++AL VP+EV SA S  L+MG+ + G   SPLRL+YH HYY LG H+NS+
Sbjct:    2 ESVGQMKQRHKLELRDLQGQTKALAKKLKKDNLSKKEIEQRVAELEKSTASRHATELQTIMQALKVSEEAPDVTPASA---------------------------------PVVVEEKSNARLEKAQRKXXXXXXXXXXRQDRIAF------ESQNVVSQRQIEIDAISNQLTSLNLVIKEIPSDGHCMYHAVADQLKLTGRLATVTD-AYLALRQKTAAYMRAHSDDFLPFVELNYDSGVPIQDQFDSYCKRVEESSDWGGQLELRALAQALMVPIEVYSASSAVLVMGDEFLGDCRSPLRLSYHLHYYTLGEHFNSI 280          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLU2_ECTSI6.250e-8360.66OTU domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z5X2_9STRA1.500e-4251.72OTU domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9CYR4_9STRA3.790e-3939.41OTU domain-containing protein n=1 Tax=Nannochlorop... [more]
W4FCW5_9STRA5.570e-3949.38OTU domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A7S4B021_CHRCT8.590e-3949.10Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A6G0X599_9STRA4.920e-3831.55OTU domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A7S0I6F7_9EUKA5.520e-3850.00Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
W7U3S7_9STRA8.440e-3834.85Ovarian tumor, otubain n=1 Tax=Nannochloropsis gad... [more]
A0A1Y1HXK5_KLENI8.550e-3835.26OTU (Ovarian tumor)-like cysteine protease n=1 Tax... [more]
A0A024UJP0_9STRA4.920e-3736.05OTU domain-containing protein n=1 Tax=Aphanomyces ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1047contigA-nodosum_M_contig1047:11124..16230 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FLU2
Preferred nameOTUD6B
PFAMsOTU
Model size1514
Max annot lvl2759|Eukaryota
KEGG koko:K14015,ko:K18342
KEGG Pathwayko04141,map04141
KEGG ModuleM00400,M00403
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006417,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008283,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016579,GO:0016787,GO:0017148,GO:0019222,GO:0019538,GO:0019783,GO:0019941,GO:0022607,GO:0030163,GO:0030433,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032268,GO:0032269,GO:0032270,GO:0033554,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034976,GO:0035523,GO:0035871,GO:0036211,GO:0036459,GO:0036503,GO:0042221,GO:0043161,GO:0043170,GO:0043248,GO:0043412,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0045727,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051603,GO:0051716,GO:0060255,GO:0065003,GO:0065007,GO:0070011,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0101005,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1990167,GO:1990168,GO:2000112,GO:2000113
Exons7
Evalue5.69e-86
EggNOG OGsCOG5539@1|root,KOG2606@2759|Eukaryota
EC3.4.19.12
Descriptionubiquitinyl hydrolase activity
Cds size837
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1047.3.3prot_A-nodosum_M_contig1047.3.3Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1047 12224..15864 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866421.9107645-UTR-A-nodosum_M_contig1047:11123..111741680866421.9107645-UTR-A-nodosum_M_contig1047:11123..11174Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1047 11124..11174 +
1680866421.924813-UTR-A-nodosum_M_contig1047:11963..122231680866421.924813-UTR-A-nodosum_M_contig1047:11963..12223Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1047 11964..12223 +
1680866422.0000305-UTR-A-nodosum_M_contig1047:15864..162301680866422.0000305-UTR-A-nodosum_M_contig1047:15864..16230Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1047 15865..16230 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866421.9375532-CDS-A-nodosum_M_contig1047:12223..122501680866421.9375532-CDS-A-nodosum_M_contig1047:12223..12250Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1047 12224..12250 +
1680866421.9500442-CDS-A-nodosum_M_contig1047:12715..129941680866421.9500442-CDS-A-nodosum_M_contig1047:12715..12994Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1047 12716..12994 +
1680866421.9607003-CDS-A-nodosum_M_contig1047:13544..136471680866421.9607003-CDS-A-nodosum_M_contig1047:13544..13647Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1047 13545..13647 +
1680866421.973381-CDS-A-nodosum_M_contig1047:14363..144961680866421.973381-CDS-A-nodosum_M_contig1047:14363..14496Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1047 14364..14496 +
1680866421.981524-CDS-A-nodosum_M_contig1047:14892..150281680866421.981524-CDS-A-nodosum_M_contig1047:14892..15028Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1047 14893..15028 +
1680866421.9915347-CDS-A-nodosum_M_contig1047:15705..158641680866421.9915347-CDS-A-nodosum_M_contig1047:15705..15864Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1047 15706..15864 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1047.3.3

>prot_A-nodosum_M_contig1047.3.3 ID=prot_A-nodosum_M_contig1047.3.3|Name=mRNA_A-nodosum_M_contig1047.3.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=279bp
MEAESKIAKMDAEIKERHRRELEAAGPEASETIPDPARAGGDGHDGEGSA
GSGTGNGVDEADVSKAAAALASASLEDQERDRRDQKKTKAQRKREKQREK
ARDLERERRIEREKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCL
YRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPFLPFLEGV
EKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGE
NYDGSPLRLTYHEHYYALGAHYNSVVPS*
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mRNA from alignment at A-nodosum_M_contig1047:11124..16230+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1047.3.3 ID=mRNA_A-nodosum_M_contig1047.3.3|Name=mRNA_A-nodosum_M_contig1047.3.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5107bp|location=Sequence derived from alignment at A-nodosum_M_contig1047:11124..16230+ (Ascophyllum nodosum dioecious)
GCTCGTGCCAGCAAGTCCCTGAAGGATTCTCCGTGATCAATCATGGCTGA GGTAATCGTGAAATGGTTATTTAAACTCTCTTATGTTGTGGTATCCTTGG AGAGTTCTTCATGCACGCGATGGAGGACTATAGATCGATTGTTTACCGTG TACTATTGACGAAAAATTGTTTTTACGAGATCTGCGGTATATTTACTTTT TACTATCATCTTGATATTTGTTGGAGACATCCATCCAGCGTGGACCAGCT TTTGCTGGAATCATCACGCGTTGAATTCTGATCGGCTTGACCTTGCCCAC CCCTATTGACCCGCCCGTCGAAGGATCGCGCGATGCGTTCGTTCGTCGGC AGGTAGACTCATGTTGAACACATGTTTTCTCAAAACACCAGATATTGTAC AAATTAGTACAAGTACGGTACCGATTGCGATGTGTACCTGGTGTACAGTA AATACCGGTACGACTAATATTTAGTACTGATACTCCCTACCTGGTACCAG GTAGTACAGTACTCTTATCATGATTCTCCCGTGCGCCCACAGACAGTTCC TAAAGAAAAATATGAACGCATCTAAACCTTGTGAGCATTTACCCAGTCAG AGGGAAAAAATTGTCAAAATATTTAGGTGGGAACATTGGCTGCAAGGCCG AAGAAACTCGCGGGATTAAATATCGGGTTCCCCAGTTTTCGTAGCATGTG ATCAACAGTACAACATCGGGGAAAAACTCATTGTTACGTATAGCTCCAGC GTCTCGAAGCATTTCAGGCAGGCTGCCCTTGTAAATACCCTCTTGTGCTG CACTCGGTGCTCCGTTGCAACGACTGATTATTGCTCCAAGGATCACGCAA AGGAGCACCGGGTACCGGATAATGTACTTTTCTTCGTCAAACATGAACCT AACCGCTAACCGTGTACTGCGGGTTCATAAGAAGACCTTATAGCGCTCCA CCTCGTCCACCTGACAGCATTTCCCCCGAACACGACGATGGTTATCAGAC GGTGGAGGAAGTGAAGGCTCGGCACAAGAAGGAGCTCAAGGCGCTGGAGG GAAGCGGGCGGAAGCTGTTGAAGCAAGCGAACAAAAACAAGGCCAAGGTC ATGGAGGCGGAGTCGAAGATCGCCAAGGTCTGATCTGCTTGGAGGTTGAC GAGAATATCCATGCTTTGTAGTAAGTAGGTGCAACTCTTCCTTCTGCTAT ATTTTATGTACTCATTGGAGTTGTATCTGTGTTACACCTGAGTACAGTAG CTGCTTCGCCGTGAAGCTCTGCATGGGAGTGCGAGACAACAGTTCGTCTA ATTCATTGTTGTACAGCTGGAAAACGTGTTGTCCAGGTCTTCGGAGGCAA GATGGGCACACATCGCAACTCCACGTTCACAAGGCATTGAAAAGAAAATG AAAATGTTGGACTTCTCCGGCCTCGTCCCTTAAGCTCTACAAGGCCTTAA ATCGTAGAAAGCGTCGTGTGTATCGAACAGGGCCATGTCTGTGCCATATG CATCCTCATGATGCCGCACTCAACCGACCGCTACAGGAAACACGCCTCAA ATCTTGCCTCGAAAACCCCGAAAATAAACTACCGTGCCGTAGATGGACGC GGAAATTAAGGAGCGACATCGACGAGAGCTAGAGGCAGCCGGACCGGAAG CATCCGAGACAATTCCAGATCCAGCGAGGGCGGGCGGCGACGGTCATGAT GGGGAGGGGAGTGCGGGGAGCGGTACCGGGAATGGCGTTGACGAGGCGGA TGTTAGCAAGGCGGCGGCAGCCTTGGCCAGCGCGTCGCTGGAGGATCAAG AGAGAGACAGGCGAGATCAGAAGAAGACGAAGGCGCAGCGAAAACGAGAG AAGCAACGGGAGAAGGCGCGTGTGCACGATAGTGCCTTCGGCGTACTACT GAAGTACTTAGTACTTCTTACTAAAGTACTTCTTCCTTGAATACTTAAGA CCCTTAACTGCTTCGTAGCGACCGTATTCAGTGTTCCACGCCCCGCTAAA ACCAACACATCAGGAGTCTAGTTTGCGTTTTGTGAAGCCCTGAACCATAG CAGGCAAGGGTGTTCTTCCGGTGCGCACGCGGTGCGTAAAGGTACGCGGT GATTTCACATGCTATTAATAAGACTCACTGGCACATTCGGCTCTGTACGT TTTGGGACACAATATGCACGTACCGTTGAACAGAAAGCGCGTTGAACTAA ATCACACGCTGCGTTCAAGTAGACCCAGCGCGTTTAAGTACACTTCTTGC CTCAAAGTTTGTCCGGGTCGTCAGGGTAGGGCCAGGGGAGAGGGATGAGT GAAGGAGGCGAGAGGCGGGGGATAAGCGCACGCAGCGCTCGTGTAGACCC AGGTCTACCTCCGACGCACGAAGACCACTACCGCGGTAACCGTAGTACAC CGTGGTAATCGTGGCGAACAGGACTTGGAGCGGGAAAGGCGTATCGAAAG AGAAAAAGCGGAAGGCGGACCCGACCCCAGAATTGTGGAGATGGAAGCGC TGGGCGCCCAGGTTGCTCCAAGAGGTATGTATCATGCCTAGTTCTGGGTC GGGGCGGGGCTTCTGTTTTACTCCACACTCCGACTCAACCACGCCGAGGT AGTATTAGTAATATGCATTTGCTGTTACGTTGTTGCGACGGCTGCATCGA TTTCACCTCCGCTTTGCTTTTTCCAGCAACCATGCGTTCTTCGACCGGGT TCGGGGGGTCGGGGGGCGGTTCGAAAACGATCGGCGTCGACCGCTGTTCT ATTTTCAAGTTTCTCTTTTTAGTTTCTAGAAAGAACCGTGCTCTATTCCA CGTCCCCAACAGATGGAGCTGCCTAGAGGCAATGCTTCAAGTCGCAAAAA CTTGCTCACACCTTTGACACTGTACGAATGTATGTATGTATGGACGAATC GTTCAGACAGTCGTCGCGAACAGAGTTGTGAATCGTCTAAACTCTTTAAA CTATATTTTTAGCGTCGTCTCCACGGTAGGGACCAACCTACACCACGAGT ACAGTTCAGTATAGTACAGCACAGTACACTATTGATGGAAATTGCTAAAA ACGAAGCCTCGGGCAAAGCGGTCGATTCTCTCCACGAGGTTGTTTGTCAG CCAAACCTCTTGTTGACAAGGAGCGTGTGCGTTTATCGTAGAGCTACTAT GCTTACTGTTAATGTTACTACACGCGTATTAGACCACCCTGCTTGTTCGA TGCGTCTTGTTATGCGCTGCGGTGTGTGTGGGGACTACAGGCCTCCGCGT GAGCGAGATCAAGGCAGACGGACACTGTCTCTATCGCGCCGTGGCGGAGC AGCTGAGCCTCTCCGGGCGCAGGCCGGAGCTGACGGAAGAATCTTACCTG CTCATGCGGCAGGAAGCTGCCAGGTTTCCGACGACTGTCCCACTTTTACT TTGATGCCGATTTTTATTTGATTTGAGGTTGCAGAGTTATTGAGGAGACT TTTGGATTCGTTGTCTGCGATGTTTGTCGCGCTCTCGGCGTGGGCAGGGA CGAAGCTCGGAAGGCTGTTTTTTTTAATTTATTAACCATTTTGATAATAT AATAGCGACAAAATAAAAAACGGAGTGGGACGGGGTGGAATCGATGCCGC CCTCTCGTGGAGGTGCTTGAATCAATAAAATAAAACGGTTTGAGAAGACG TATTTACTTCAACCGCTGCAGCTGTATACATCATATACTGTAAAGTCCGT CATCTCCCCGTTCAAGTGACCGAATATCCTATCGTTCCCCCCGTTTGTCA TTTTTTGGAAACCCGATAGAGAACTTCGGTCCTCTCCCGAAGACTACCTG CCCTTTTTGCCCTTTCTCGAAGGGGTGGAAAAGGGAGAGGCGTTCGAGCA GTACTGCCAAAATGTCGAGGGTAGCGCCGAGTGGGGTGGACAGGTGGAAC TGCAGGTTAGTGTTGCCTTGTGACCATCCCACCTGAGGTCCGCTTGAGAT CCACGTTCGCGTTGTACCACCTCCGACCATTTCCGCCGCCGTGCACTATT AATAGGAACTCCCTGAGTGCGCACCGTGGCGTATCATACGCTTGTTGAGG TTTCCGCTCCACATAGGGTCAGCACTGTTCATATTGATTTTTTATGAGAC TTGGATGGAGAAAGTACTCAGCTTACCATTTCGCAAGCTTATTTTTTTGT ACTTCAATTGCTTGTAAAGACGAGGCGGGTAATTCTCGTCCGGAGTTCCT CCGTCAGCCCATATCGACCGATCATTCGACTTCTGTCTACTCCTGCGCAA AGCAAAACACACTTTTATCGTACTATAGAGATAGCAGTAAGCCTCCCGCC ATTTCCCTCAAGAACCACTACAGTTGCGTACAGGCACTCGCGTTTCGTGT GGACGTGTGTGGACGCAGACGGTCCACCCATAGGGTTTCCGTGATATTTC ACTGAAGACGCTAACAGCGAAAACCACGGGCAGTGGAGCCATGAGTGGGG CCCCGACTTGAATTATTAATAGATGACGGTACCACAGGGTATCTCTCTTT TTTATGAACCTTGTTCCGCCGCCCACGTCTCTTCTTGTCACACCGTCTCC TTTCGAAATCCTTCTCTGGAACGCGCGCACAGGCTCTCTCCAAGGCGTTG CGGGTGCCAATGGAAGTGCTCTCAGCCGTTTCTCCCCCGTTGTTGATGGG GGAAAACTACGACGGATCCCCGCTTCGACTCACCTACCACGAGCACTATT ACGCCTTAGGCGCTCACTACAACTCCGTCGTGCCGAGCTGACCCGCAAGA TAACTATTTTTAGCTCTATATCCGCTCCTCTGGGTTGAGAACATTTCTCA GAGTGCGTGAAAAAAATTCTCGTAGATGTAAGCGGGTATTGAGAGCATCG CATTGTTATGGTCGGATAACGCACTATTGTATTAATATTAGAGTTGAGCA GCGTTCATGAGTGTTTTTTCTGACCCATGAGTATACGACGTAATTTTTTT TGTATGCGTGTACCCTATATATTCGGCTTAAAGTCATCCCTCCTATTATC AAGGTCTTTTTTTTTTGTATCTCGCCAGACGCTCGAAAGTCACAGCGACG TTGTAAGGGTACTGACATCGGCATCGGCACGGAACTATCGGACCGCTAGG AAGCAAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1047:11124..16230+

>mRNA_A-nodosum_M_contig1047.3.3 ID=mRNA_A-nodosum_M_contig1047.3.3|Name=mRNA_A-nodosum_M_contig1047.3.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=837bp|location=Sequence derived from alignment at A-nodosum_M_contig1047:11124..16230+ (Ascophyllum nodosum dioecious)
ATGGAGGCGGAGTCGAAGATCGCCAAGATGGACGCGGAAATTAAGGAGCG
ACATCGACGAGAGCTAGAGGCAGCCGGACCGGAAGCATCCGAGACAATTC
CAGATCCAGCGAGGGCGGGCGGCGACGGTCATGATGGGGAGGGGAGTGCG
GGGAGCGGTACCGGGAATGGCGTTGACGAGGCGGATGTTAGCAAGGCGGC
GGCAGCCTTGGCCAGCGCGTCGCTGGAGGATCAAGAGAGAGACAGGCGAG
ATCAGAAGAAGACGAAGGCGCAGCGAAAACGAGAGAAGCAACGGGAGAAG
GCGCGTGACTTGGAGCGGGAAAGGCGTATCGAAAGAGAAAAAGCGGAAGG
CGGACCCGACCCCAGAATTGTGGAGATGGAAGCGCTGGGCGCCCAGGTTG
CTCCAAGAGGCCTCCGCGTGAGCGAGATCAAGGCAGACGGACACTGTCTC
TATCGCGCCGTGGCGGAGCAGCTGAGCCTCTCCGGGCGCAGGCCGGAGCT
GACGGAAGAATCTTACCTGCTCATGCGGCAGGAAGCTGCCAGAGAACTTC
GGTCCTCTCCCGAAGACTACCTGCCCTTTTTGCCCTTTCTCGAAGGGGTG
GAAAAGGGAGAGGCGTTCGAGCAGTACTGCCAAAATGTCGAGGGTAGCGC
CGAGTGGGGTGGACAGGTGGAACTGCAGGCTCTCTCCAAGGCGTTGCGGG
TGCCAATGGAAGTGCTCTCAGCCGTTTCTCCCCCGTTGTTGATGGGGGAA
AACTACGACGGATCCCCGCTTCGACTCACCTACCACGAGCACTATTACGC
CTTAGGCGCTCACTACAACTCCGTCGTGCCGAGCTGA
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