mRNA_A-nodosum_M_contig1047.3.3 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: D7FLU2_ECTSI (OTU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLU2_ECTSI) HSP 1 Score: 269 bits (687), Expect = 6.250e-83 Identity = 202/333 (60.66%), Postives = 226/333 (67.87%), Query Frame = 3
Query: 201 GYQTVEEVKARHKKELKALEGSGRKLLKQANKNKAKVMEAESKIAKMDAEIKERHRRELEAAGPEASETIPDPARAGGDGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDQKKTKAXXXXXXXXXXARDLXXXXX------------------IEREKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPFLPFLEGVEKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGENYDGSPLRLTYHEHYYALGAHYNSVVPS 1145
G ++V+EVKARHKKE+KAL+G+GRKL+KQANKN E EA+E A GDG XXXXXXXXXXXXXXXXXXXXX D + XXXXXXXXX XXXXX I +EK EGGPDPRIVEM+ L QVAPRG RVSEIKADGHCLYRAVA+QLSL+GRRP LTEESY LMRQEAARELRSSP +YLPF L+G+E+GE F++YC VEGSAEWGGQVELQAL ALRVPMEV SA+SPPLL+G+ YDG PL LTYHEHYYALG+HYNSVVP+
Sbjct: 3 GSESVDEVKARHKKEIKALDGTGRKLIKQANKNXXXXXXXXXXXXXXXXXXXXXXXXXXE----EATEA------AAGDGDVDDASESAAKSXXXXXXXXXXXXXXXXXXXXXSEVDGVADGVGAMSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRIAKEKEEGGPDPRIVEMDVLKTQVAPRGFRVSEIKADGHCLYRAVADQLSLTGRRPGLTEESYPLMRQEAARELRSSPSEYLPF---LDGLEEGEEFDKYCVKVEGSAEWGGQVELQALCSALRVPMEVFSAMSPPLLLGQGYDGPPLLLTYHEHYYALGSHYNSVVPA 322
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: A0A835Z5X2_9STRA (OTU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5X2_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.500e-42 Identity = 90/174 (51.72%), Postives = 123/174 (70.69%), Query Frame = 3
Query: 651 KAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPE------LTEESYLLMRQEAARELRSSPEDYLPFLPFLEGVEKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSP-PLLMGENYDG---SPLRLTYHEHYYALGAHYNSVVP 1142
+A GPD R VE+EAL A + PRGL V+ I++DG+CLYRAVA QL+++ + E+ + +R+ AA LR E F+PF+E ++G A+E YC VEGSAEWGG+VEL+ALS+ALRVP+EV SA + P+++GE +G +PLR++YH+HYYALG HYNSVVP
Sbjct: 150 RAAAGPDARTVELEALSANLLPRGLAVAPIRSDGNCLYRAVAHQLAVAAHGGDGAAAAAAAEDGHAGLRRVAAAHLR---EHAAEFMPFVEACDEG-AYEAYCALVEGSAEWGGEVELRALSRALRVPIEVWSAAAAQPMVVGEGEEGGAAAPLRVSYHQHYYALGEHYNSVVP 319
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: A0A4D9CYR4_9STRA (OTU domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYR4_9STRA) HSP 1 Score: 154 bits (390), Expect = 3.790e-39 Identity = 134/340 (39.41%), Postives = 180/340 (52.94%), Query Frame = 3
Query: 174 DSISPEHD-DGYQTVEEVKARHKKELKALEGSGRKLLKQANKNKAKVMEAESKIAKMDAEIKERHRRELE--AAGPEASETIPDPARAGGDGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRD----------QKKTKAXXXXXXXXXXARDLXXXXXIEREKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPFLPFLEGVEKGEA--FEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMG-ENYD-GSPLRLTYHEHYYALGAHYNSVVP 1142
++ SPE DG +T EEV+ RHK E++ LEG R LLK+A K K E + ++A+M+ +++ERH REL AA P GG+G D +K+ KAXXXXXXXXXX XX + +E G R +EM + + ++P GLRV E+ ADGHCLYRAVA QL G + + Y +R+ AA+ + S PED FLPFL G E+GE E Y VE +AEWGG++E++AL A + P+ V +A P ++G E+YD PL L+YH H+YALG HYNSVVP
Sbjct: 5 EASSPEETVDGAETEEEVQKRHKAEVRQLEGKTRALLKKAP--KPKKAEVQGEVARMERDMEERHARELGKFAAAPNGGRN------EGGNGGGLDSKEVRFAPLTSGSKNGRQEGGEGRGKEGEGGSEEEEDGGATAAEKVARKRDKAXXXXXXXXXXXXXXXXARALAKE---GVISLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQG----IPSQGYPEVRRSAAQHILSHPED---FLPFLAGGEEGEGAGLEAYVHAVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPIYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSVVP 326
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: W4FCW5_9STRA (OTU domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCW5_9STRA) HSP 1 Score: 153 bits (386), Expect = 5.570e-39 Identity = 79/160 (49.38%), Postives = 110/160 (68.75%), Query Frame = 3
Query: 675 RIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPF--LPFLEGVEKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGENY---DGSPLRLTYHEHYYALGAHYNSVV 1139
R +E +A+ AQ+ GL V EI +DGHC+Y AVA+QL L+ R P + ++Y+ +RQ+ A LRS +D++PF L + + + FE YC VE +A+WGGQVEL+AL++AL VP+EV SA S L+MG+ Y D PLRL+YH HYY LG H+NS+V
Sbjct: 125 RQIESDAIAAQLTSLGLIVKEIPSDGHCMYHAVADQLKLTRRLPFPSSDAYIPLRQKTAAYLRSHADDFVPFVELDYASDIAIQDQFESYCARVEATADWGGQVELRALAQALAVPIEVYSASSSVLVMGDEYHREDQPPLRLSYHLHYYTLGEHFNSIV 284
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: A0A7S4B021_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B021_CHRCT) HSP 1 Score: 154 bits (390), Expect = 8.590e-39 Identity = 82/167 (49.10%), Postives = 104/167 (62.28%), Query Frame = 3
Query: 639 IEREKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPFLPFLEGVEKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGENYDGSPLRLTYHEHYYALGAHYNSVV 1139
I EKA GP R VE E L A++ P GL V E+ ADGHCLYR+VA+QL SG + + R+ AA +R+ P+D++P+LP G + YC VE S+EWGGQ+E+ ALS A R + V SA PPLL GE Y G+PL L YH HY+ LG HYNS+V
Sbjct: 207 IAEEKAASGPSARAVETERLMAKLEPLGLAVQEVPADGHCLYRSVADQLQRSGDAADFQQ-----CRRLAAEYIRTHPDDFMPYLP---GEAGATTIDAYCAQVESSSEWGGQLEITALSHACRRCVAVYSADGPPLLTGEQYAGAPLTLAYHRHYFGLGEHYNSLV 365
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: A0A6G0X599_9STRA (OTU domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X599_9STRA) HSP 1 Score: 150 bits (379), Expect = 4.920e-38 Identity = 100/317 (31.55%), Postives = 154/317 (48.58%), Query Frame = 3
Query: 207 QTVEEVKARHKKELKALEGSGRKLLKQANKNKAKVMEAESKIAKMDAEIKERHRRELEAAGPEASETIPDPARAGGDGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDQKKTKAXXXXXXXXXXARDLXXXXXIEREKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPF--LPFLEGVEKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGENYDG---SPLRLTYHEHYYALGAHYNSVVP 1142
+TV + K RHK EL+A + S + L+K+ E ESK+ +M+ EIK RH EL+ + + T RD+KK + +RD+ R +E + + ++ + + E+ +DGHC+Y A+A+QL P ++ ES++ +R A+ LRS D+LPF L + V + FE+YC+ VE S++WGGQ+EL+AL++AL +P+EV SA + + MGE + +PLRL+YH HYY+LG HYNSVVP
Sbjct: 2 ETVGQAKQRHKLELRAWQSSQKALVKKWKSENMSKKEIESKLVEMENEIKVRHDTELDNISKQTAST-----------------------DEPEIKLAEVIVEKATSTAKLDKAQRKRDKKKQEEKARQERIANESRDIV--------------SKRQIECDQIADKLKALNMAIKEVPSDGHCMYHAIADQLKRMDFLPHMSMESHVYLRLRTAKYLRSHANDFLPFVELNYESDVSNEDQFEEYCKRVEESSDWGGQIELRALAQALELPIEVHSATTDVIKMGEEFSKIGEAPLRLSYHLHYYSLGEHYNSVVP 281
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: A0A7S0I6F7_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6F7_9EUKA) HSP 1 Score: 146 bits (369), Expect = 5.520e-38 Identity = 84/168 (50.00%), Postives = 108/168 (64.29%), Query Frame = 3
Query: 648 EKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPFLPFLEGVEKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGENY--DGSPLRLTYHEHYYALGAHYNSVVPS 1145
EKA GP R +EM L Q+ P G +++EI ADGHCLYRAVA+QL G E EE Y R+ AA +RS P D++P++ EG++ G Y Q VEGS EWGGQ+E+ AL+ A + + V SAV+P L+ GE Y +G L L YH+HYY LG HYN+VVPS
Sbjct: 16 EKAGAGPSQRELEMAQLEQQLQPLGRQIAEIAADGHCLYRAVAQQLMQHG--SEGVEEDYSGCRRLAAAYMRSHPGDFMPYVA-AEGMDMG----TYTQQVEGSNEWGGQLEITALAHARKRTIAVFSAVAPLLVTGEEYADNGPRLELCYHKHYYGLGEHYNAVVPS 176
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: W7U3S7_9STRA (Ovarian tumor, otubain n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3S7_9STRA) HSP 1 Score: 149 bits (375), Expect = 8.440e-38 Identity = 115/330 (34.85%), Postives = 160/330 (48.48%), Query Frame = 3
Query: 174 DSISPEHD-DGYQTVEEVKARHKKELKALEGSGRKLLKQANKNKAKVMEAESKIAKMDAEIKERHRRELE--AAGPEASETIPDPARAGGDGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDQKKTKAXXXXXXXXXXARDLXXXXXIEREKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPFLPFLEGVEKGEA--FEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMG-ENYD-GSPLRLTYHEHYYALGAHYNSVVP 1142
++ SPE DG +T EE++ RHK E++ LEG R LLK+A K K + + ++A+M+ +++ERH REL AA P R+ ++ A RDL EM + + ++P GLRV E+ ADGHCLYRAVA QL G + + Y +R+ AA+ + S PED FLPFL G E+GE E Y VE +AEWGG++E++AL A + P+ V +A P ++G E+YD PL L+YH H+YALG HYNSVVP
Sbjct: 5 EASSPEETVDGAETEEEMRKRHKAEVRQLEGKTRALLKKAP--KPKKADVQGEVARMERDMEERHARELGKFAAAPNGG----------------------------------------------------REAEEEAARALAKEGVVSLRDL--------------------EMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQG----IPSQGYPEVRRSAAQYILSHPED---FLPFLAGGEEGEGAGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSVVP 253
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: A0A1Y1HXK5_KLENI (OTU (Ovarian tumor)-like cysteine protease n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HXK5_KLENI) HSP 1 Score: 152 bits (384), Expect = 8.550e-38 Identity = 116/329 (35.26%), Postives = 163/329 (49.54%), Query Frame = 3
Query: 207 QTVEEVKARHKKELKALEGSGRKLLKQANKNKAKVMEA-----ESKIAKMDAEIKERHRRELEAAGPEASETIPDPARAGGDGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDQKKTKAXXXXXXXXXXARDLXXXXXIEREKA-----EGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPFLPFLEGVEKGEA---FEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGENYDGS---PLRLTYHEHYYALGAHYNSVVPS 1145
+T EEV ARH+KE+KAL+G +L KQA K +A + +IAK+DA +K+R +EL A G E + D + QK+ RD +ERE+ G R++E + L +++P GL + EIK DGHCLYRAV +QL L G+ L ++ YL +R+ AA +R+ +D+LPF+ +G+ FE YC+ VE +A WGGQ+EL AL+ ALR + V SA P + MG+ Y+ PLRL+YH H Y LG HYNSVVP+
Sbjct: 88 ETREEVLARHRKEIKALQGKEIELKKQAAKGSKAAQKAAKHAVDEQIAKLDASLKKRQAKELAALGFGEKEAESAEGKKPDD--------------------MDTLIRAIAGTSVGPQRGPSKAQKR--------------RDAKMKQEVEREQRIQQEQSGVVSERVIENQRLAEKLSPLGLALKEIKPDGHCLYRAVEDQLQLQGQPSNLIQD-YLSLRKLAAVYMRAHKDDFLPFVTEHATEHEGDPDAQFEAYCKEVEETATWGGQLELGALAHALRQHISVYSASLPVVEMGKEYERGATQPLRLSYHHHAYGLGEHYNSVVPA 381
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Match: A0A024UJP0_9STRA (OTU domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJP0_9STRA) HSP 1 Score: 147 bits (372), Expect = 4.920e-37 Identity = 115/319 (36.05%), Postives = 173/319 (54.23%), Query Frame = 3
Query: 207 QTVEEVKARHKKELKALEGSGRKLLKQANKNKAKVMEAESKIAKMDAEIKERHRRELEAA--GPEASETIPD--PARAGGDGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDQKKTKAXXXXXXXXXXARDLXXXXXIEREKAEGGPDPRIVEMEALGAQVAPRGLRVSEIKADGHCLYRAVAEQLSLSGRRPELTEESYLLMRQEAARELRSSPEDYLPF--LPFLEGVEKGEAFEQYCQNVEGSAEWGGQVELQALSKALRVPMEVLSAVSPPLLMGENYDG---SPLRLTYHEHYYALGAHYNSV 1136
++V ++K RHK EL+ L+G + L K+ K+ E E ++A+++ RH EL+ + SE PD PA A R +K + XXXXXXXXXX +D +++ R +E++A+ Q+ L + EI +DGHC+Y AVA+QL L+GR +T+ +YL +RQ+ A +R+ +D+LPF L + GV + F+ YC+ VE S++WGGQ+EL+AL++AL VP+EV SA S L+MG+ + G SPLRL+YH HYY LG H+NS+
Sbjct: 2 ESVGQMKQRHKLELRDLQGQTKALAKKLKKDNLSKKEIEQRVAELEKSTASRHATELQTIMQALKVSEEAPDVTPASA---------------------------------PVVVEEKSNARLEKAQRKXXXXXXXXXXRQDRIAF------ESQNVVSQRQIEIDAISNQLTSLNLVIKEIPSDGHCMYHAVADQLKLTGRLATVTD-AYLALRQKTAAYMRAHSDDFLPFVELNYDSGVPIQDQFDSYCKRVEESSDWGGQLELRALAQALMVPIEVYSASSAVLVMGDEFLGDCRSPLRLSYHLHYYTLGEHFNSI 280 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1047.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1047.3.3 >prot_A-nodosum_M_contig1047.3.3 ID=prot_A-nodosum_M_contig1047.3.3|Name=mRNA_A-nodosum_M_contig1047.3.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=279bp MEAESKIAKMDAEIKERHRRELEAAGPEASETIPDPARAGGDGHDGEGSAback to top mRNA from alignment at A-nodosum_M_contig1047:11124..16230+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1047.3.3 ID=mRNA_A-nodosum_M_contig1047.3.3|Name=mRNA_A-nodosum_M_contig1047.3.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5107bp|location=Sequence derived from alignment at A-nodosum_M_contig1047:11124..16230+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1047:11124..16230+ >mRNA_A-nodosum_M_contig1047.3.3 ID=mRNA_A-nodosum_M_contig1047.3.3|Name=mRNA_A-nodosum_M_contig1047.3.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=837bp|location=Sequence derived from alignment at A-nodosum_M_contig1047:11124..16230+ (Ascophyllum nodosum dioecious)back to top |