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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 601 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 600 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866420.1811252-CDS-A-nodosum_M_contig1046:14164..14668 | 1680866420.1811252-CDS-A-nodosum_M_contig1046:14164..14668 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1046 14165..14668 - |
| 1680866420.1894376-CDS-A-nodosum_M_contig1046:23436..23532 | 1680866420.1894376-CDS-A-nodosum_M_contig1046:23436..23532 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1046 23437..23532 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1046.6.1 >prot_A-nodosum_M_contig1046.6.1 ID=prot_A-nodosum_M_contig1046.6.1|Name=mRNA_A-nodosum_M_contig1046.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=200bp
LFSLSVVVELGALAFVRLSRDHPPSPGFRGGKLVAMARSQSRGRDYSSGG
GASRSSSRSPDRSRRRSRSLSPRRDDHRGGGRVGGGGRDRSAEPRGSVGK
RDGSRGRRNDSRDDRRGGDYVPGSGERGRGVDMSRRDRSRDRGRSGSIEQ
DHRRDGGGGGYRYRKTDKDRSRSSSSRKESARVESRDRSGFGDRERDRGI back to topmRNA from alignment at A-nodosum_M_contig1046:14165..23532- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1046.6.1 ID=mRNA_A-nodosum_M_contig1046.6.1|Name=mRNA_A-nodosum_M_contig1046.6.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9368bp|location=Sequence derived from alignment at A-nodosum_M_contig1046:14165..23532- (Ascophyllum nodosum dioecious)
CTCTTTTCGCTGTCTGTTGTGGTAGAATTGGGCGCCCTTGCTTTCGTTCG
CCTCTCAAGAGATCATCCTCCGTCGCCGGGTTTCAGGGGAGGGAAGGTGC
GTCTGCTGTACCTTTGCCCTCGAACACACCTGTAGTAATTGTCTTGCTGT
TAAGGGGCAAGCCTACTCTGTATTAAGTAGACTCTTTACGCGGTTTCGCA
GGCACAGCAGCTTCTGAACAAATACTGCCACCGATTTCGTACAGCTTCTT
CTGAACTATAGTACACTCGCGCCCTTCGCCCAAGCGGTCGTTATGCACTG
GACACACAGCTGTATTATTCCTCGCAGAGGAGTCTTTTGCCTTTTTCCTT
GCACAATTTTTCATCAATCGTGTATGTGTGTGTGTGTGTTTTCTTCCCAT
CCATTCTGGACATCAAGTTCGTTGGACGTACCAGCCGGGGTCACACAGGA
GGAAGGTTACACAGTATTTTTAATCCACCTTCCTTCTGCGGTGCGTGCTT
TGATTTTTGTCGCGAGAAGGATTCAGCCATTCCTTTCCCTCGTCGACCGT
GAAGTCGAATTTTGTGTACTAACGAATTAATCGTTCTCCACCCGTTGGGC
ATTTTTTTTGTTTTTTGTTTTTTGTTTTTTGTGAGAAAAATCCCGTTTGC
CGGGATCGAACTCACGTCCCAACGTGTCAGAAGGTTACGAGGTGCCGACT
GAGCTACCGGGGTCGACCTGTGGTTTAAGAAAAATCTGAACGCATCTAAA
CCTTCTGAGCATCCACCTCAAGTGGAAGAGTGTCTAAAGGTTTAGGTGGG
AACATTGGCTGTAAAGACAAAACCTCTTCATGGTATCAAAAGGGTTCTCC
ATGGTTAGTCAATCCTGCTTGTACCAAGGTATGCGTTCACGTCATCGAAG
TACTATTACAGCAGTACTCATAGTTGGTACAGGGCTACTATTAAGAGTGT
AGCGTAGTGTAGTGCAGTGCCAGAGATACAGGCAGTACGACCAGTCCCTT
GCACTTGTTATCATTGCCTCTCATTGCTCTAACGTAAAAGCTCTTCAGCA
TTAGAGGGAAGAATACAGTACTCAGTTCTTGAAATTTTTATGCTGAGTAC
GGTACAGTACAGTTCTAGTATTTAGTAGACACGGTTACTGTATACAGTAT
CTACTGCCGTACCGCGGTACTACACGATATGGAGTACTACAATATACACA
TGTACTAATAAAATCTTACCATACTTGCTTTTGTTACTACTGAATAATGA
TTAATGTACTTGTAAAGTTCCCTCTCTGACCCTATACTACACTGTAGTCC
AGGACTCTTAGATAAAAAGGATTGTATTGGTTTTTTTGTGTCCCTGGTTT
GTTTGTATGTTCCTGTATGGTCATGGAGATGGATAATGTAAGTGTAATCC
TGCTATAACGGAACAGGCTTCTCCCGAAATTTGGTCTCGCGACCCGATCC
GTAGTTACATTGAATCCCTTACTTGGGATTCCTCCCGATACCATGCAGAG
TCCCGTTTTCGTCACGCAATTGCGTACCGATGGCGTTCACTGTTCCCACC
TAAACCTTTAGACACTCTTCCACTTGAGGTGGATGCTCAGAAGGTTTAGA
TGCGTTATAACGGAGGGCTTCTCCCCGAAATTTTTCGACCCGATGTAAAC
CCACTTTGATACCATTGAAACGAGAAGATCATCTTTCGATTTTTCTTAAA
TGAAACGAGAAGAAATCTTAAAATGTGGAAACAAAAAATGGGACCAGCAG
ATGAGCTCGAACGTTCATCCAAATTTCCAGAAGTTCTAAATTTCAACTCA
GCTGATCTCAGACGTTGCGGACCTCGGAAAACGCGGCGGAACTAGCGGAG
GTGTCGCAGCTATTGATCCCACCTAAACGTTTTGACATTTTTTCCCCCTG
ACTGGGGGATGCTCAGAAGGTCTAGGTGCATTCAGATTTTTCTTTAAACT
TTCGGTGGATGAGTGTAGCTCGTCCAAGAATTTCTCATACGGAAAACGCA
AAAAACGTGAAATCAGTATGAGCCCCGCTTGATCAGACTCATCGCTCATA
CCAGACCTGACAAACGCAATTCGGAGGGGTCTCTAACCGGTACTTTCAAC
ATGCCCACTTCATACCAATAGTGGGTGTGGGAAAGAGAGGCGAATATTAA
TTGGTCCATGGTGATCTGCCAAGGCAGCACCCGTTCGGAACTACCTTGAG
GTGTACTGGCCCTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTAC
GCAACTGCGTGACCCGATAAACTCGGGACTGACCCGATGGCGTATGGCGG
TTTCATATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCA
CCAGATTCAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGGGACG
GCTGAACCCGTCTCGCGAGACCAAATTCTCAGGCACGCACGGGGACAGGG
GAATGTTCATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGACAACCTT
ACCCGGTTGATCCATACTCTGCTATATGTAATGACCATACAAAATAGAGC
CTACCTGGCATCCAGTAACTGGGTTATCGAGACCAAGAAAATTAGGGATG
TCACTAGGGCGCCCTCCAAAGGACCAAAGCCGGGAGGCATCAGACATGAG
TTGTGGTCGGGGGACCGGAGAAGACAAAACTCGTTCCTCTGCTACGTGTA
CGGAGGGGAGGGGATGCAAAGGGTCCTTCTTTTCGAGGAATGTTGTGTTT
TCAAAATTTTCAAAATTTCTCGATTTTTGCCAACAGCAGATCATACACAC
ACCAACACGAGCCAGCACGAGGCATCCCGCGAAACACAGGAGCAAGGGTC
TAACTTGTGGGCTTGCTACTGCCGAACATCGCTTGCATTGTTACGTAGAC
CACAACAACAGTGGTTGCTGCAGTGGTTACGAGCCTGCACGAGGCGAAGC
ACCGGGACACTACAACAATCTATCCAACCTCTACGCTACCGTTTCCTTTT
GTGAGATGTCAAGAGCATTCCCAATAAAGTTTACATCGAGATAATATACT
TGACACTCTGTGGGCTTCAGGCGACGCACAGACCCACACTCGCAGGTTTA
CTCCTTCCGAGCTGCCTCATTGTAGTATCGCTCTGGATGGTTTGTGAAAC
AGCGGCACAGCACGCCGGTAGACGACGTCTACCGGTACAGAGTCGGTTGT
ACTTAAGTTTTTTGTGTACAGATATTAGTATAAACCCGGATTATGTATGC
ACGTATGATCACACATATAGCAAAAGTATAGATCAACCAGGTAAGGTCGC
CAACCCTGCTCGTGGTCAGCTGAACAGGAAAAATTTGGTCTAGCGAGACG
GGTTGGCAACCTTACCTGAGAATTTGAAGTTGATTACATGTTTCAATCTG
GGTCGGGATTGATGTGTACCATATCATTATTTTTATAGGGCCTTATTTTT
TAGAAAAGTTTCGCGAAGTCATGACTGAGCAGCACCGTTGTAGTAATGTC
ATGATTGGGCAGTACCGTTTTTACAACTTCGGGTTAGGGTTCAACCCTGT
AAGGGATGAAGGCTCCACAGCTTACTGAGCATCCCCAAGTCAGGGGGAAA
AATGTTCAAAGAAAAATCAGAACGCGCCTAGACCTTCTGAGCATCCCCCA
GTCAGTGGGGAAAAATGTCAAAACGTTTAGGTGGGATCAAAGGCTGTTGC
TGAACTCTATCCAGTACCTTCTCTTTCGTACTATTCAAGGCAAAGAAACG
AATTTCCGTGTCCACAAGCTAATCCAAAATAAGGTACAGAAATAAACAAA
CAAAAGATCCAGAGTAAATCCCAACATTTGCGAAAAAATATGTCGTACCT
GGTAGCAGGTTCCTAAAAATAACAAGTTCAGACAAAATAAGCAGGTTAGG
GCAGACCAAAGTACAAAAAGGAAGTACAGCCCATAGCTCCAGCTCACGAA
ACACGCCCGCCCAACCTTGGAACTAAAAATGCCCAACGGGTGGAGAACGA
TTAAATCGTTAGTACACAAATTCCGACTTCACAGTCGACGAGGGAAAGGA
ATGGCTGAATCCTTCTCGCGAGAAAAATTGAGGCACGCACCGCAGAAAGA
AGGTGGATTAGAAATTCTGTGTGACCTCCCTCCTGTGTGACTCCGGCTGG
TACGTCCAACAAACTTGATGTCCAGCGTGAATGGGAAGAAACACACACAC
ACAACACACTGTACGTTTTGGTGTCCCTACATGGTAAGTGTACAGTGTAA
CGGTGGGCTTCCCCCCGATATTATACTGTTGACCCTATGTGACTCCATTG
GGGAACCCTTTCAATACCATGTAGAGTTTTTGTACCTACAGCCACTCTTC
CCACCTAAACCTTTTGACTAATAATGGGAAGGTTTAGATGTGTTCAGATT
TTTCTTTAAACAAGAGCGACGAAAAACTGCAGTCTAAATATGCCTGCTGA
CCAACACAACTTCATGGGTACAGACGGCTTGGAACTAAAAATGCCCAACG
GCTGGAGAACGAAATCGTTAGTACACAAATTCCGACTTCACAGTCGACGA
GGGAAAGGAATGGCTGAATCCTTCTCGCGAAAAAAAATGAGGCACGCACC
GCAGAAAGAAGGTGGATGAGAAATCCTGTGTGACCTTTCTCCTGCGTGAC
CCCGGCTGGTACGTCCAACGAACTTGATGTCCATAATGAATGGGAAGAAA
GCACACACACACAACACACTGTATGTTTTGGTGTCCTACATGGTAAGTGT
ACAGTGTGACGGTGGGCATCTCCCCGATATTATACTGTTGACCCTATGTG
ACTCCATTGGGGAACCCTTTTAATACCATGTAGAGGCTTTGTCCCTACAG
CCACTGTTCCCACCTAAACCTTTTGACTAATTGGAAAGTTTCAAGTTTAG
ATAGATGTGTTCAGATTTTTCTTTAAACAGGAGCGCTGTAAGGACGAAAA
ACTGCAGTCTAAATACTAAATATGCCTGCTGACCAACCATCAGCCCCTGG
CTGTCGTACAGACGGCGCAATGAACCGCTGTATGGGTTCCGTATCAGCAA
CATCCGGCCCTGATACGGTACTTCAAGTGCCGGATGAGATTTTACAAAAT
TTTGGCATGAAAACGATTTTTCCAAGGACGTTCCGAAACTCCCTAATATT
TATGTGGGTGTGTACACCGGGACTGGCGTTTTGAGGCTTTCGTCAACGTA
CAGATACCCGGAGCAGGAGACGACCTACTGAGTAGTGCAGCGGGAAAGCC
TCGGTATATACAGCTCAAAAGGTTGCGTTGAGAATCGATGCGTTAGCAAA
CCTGCAAGAAAAGGCCCCACGTGGAGCCACCTTCCCGGGACGGCGGGGCA
AGGTCTTTTTTGTTTTTCTCTGTATGTACGTGTTTTACAATCTGCCCGTT
TCGGGTATAGGCAAACGGAAATGAATGACAATAATTTCAAAACAAACAAG
TTGACAACAGCAGCCAGCCAGGACCAAAGCCAAAAACCACAACAAGAGTA
CGTGTTTAAAGAAAAATCTGAATACACCTAGACCTTCTGAGCATCCTCCA
GTCTGGGGGAAAAAATGTCAAAACGTTTAGGTGGGATCAATAGCTGAAAA
TACAAAACCTCTTCATGGCATTTAAACGGGTTCCCCGATGGTAATAACAT
TGGGTCAACAGTATAATGTCGGGGAGAAACCCATCGTCATACTGTACACT
TACATTAATCGCCATGCAGGGACACCAACTGTTCTTTTTCTCCTTATACT
ACTACATAATGATACAGTTCCCTCTCTGACCCTAATTTAATTTCCCCTTT
GTCGCCTCCCATCAACCATCAATTTATATCAACAACAAAGAACCTCACCT
ATATAGTAATATTAATTAAATTTTACTTGATTTTCTCTAAGATCATATTC
TTTTGTTCTCTTTTCCCTGTTCAGCAGACCACGAGCGGGATTGGCCACCG
TGTAAAGTAGTTTTTTCGGGTTGGCAACCAATACGCTGAATGTGAGAAAC
AACAACTGTCGACCCGATGTAGTTACATTGGGGAACCCTTTTGATACCAT
GAAGAGGTTTTGTATCTACAGCCAATGTTCCGACCTAAACCTTTAGAGCC
TAGACACTCCTCCACTTGAGGTGGATGCTCAGAAGGTTTAGATGCGTTCA
GATTTTCCTTAAACAAAAGGGAAGACAAACCAATACATCATCAAACAATA
AAGACAAATCCAATACAATCATTGAAACGAGCACAGCAGAGGACCATGAT
GATGAGAATCTTCATAATCCAAGTACACGACCCCGTTATTCACCTGGAAG
TAGACGAAGAGCAGTAGGCGATCACACGAGGAGGTAAGAGGCAAGCGGAA
ATAACTGGGTTCCTCGCTCCAAGAGTACGTGTTCCCCAACCTGCCCGTTT
CGGGTATACAGGGGCAAACGGAAATGAAGCACACCAAATTCAAAAGAAAT
AAGTTGACAACAGCAGCCTGTACCAAGTACCAATCACAGCCGAAAACGAC
AAGACTTCAAAAAAGGGTTTCTTGTGGGATGGTTCTGATGGCGTCAACCA
TGTTGCACGAGAAGTGTTGCAAATAGGTGCTCCCAGTTCGATCCCGGTAA
ACGGAATTTTTCTCACTAAAAAATTAAAAATTAAAATACCCGATGAGTGG
AGAACGATTAAATCGTTATTTTAGTACACAAAATTCGACTTCACGATCGA
TGAGGGAAAGGAATGGCTGAATCCTTCTCGCGAGAAAATTTAAGGCATGC
ACCGTAGAAGGAAGGTGGATGAAAAAGCCTGTGTGACCTTCCTCCTGTGT
GACCCCGGCTGGTACGTCCAACGAACTTGATGTCCAGAATGAATGGGAAG
AAAACACACACAAACATATACAACATACAAAATATATCTCGAGTACTACA
GCATTAAATAGTACTGGTAGTTAGTCCATATGAGATGAGCAGGCTGACGC
GGGACGGGACTGCCGAACCCGTCTCGCGAGACCAAATTCTCAGGCACGAA
CGCGGACAGGGAAATATTCGTTTTTCCTGTTCGGCTGACCACGTGCAGGA
CTGGCAACCTTACCTGGTTGATCCATGCTCTTGCTATATGTGTGACCATA
CATACATACATACATGATGCGACTAGATTTTATACCTTGGTACTAGGTAC
CTTTGTTGTAACCCCATACAAATACAATACCTGGTATACTACTGGTGTTA
AATAGTAGTACGGAGCCGGTCGACCCCGGTAGCTCAACCTAAAACACGTT
GGGACGTGAGTTCGATCCCACGCAAACGGGATTTTTCTCACTAAAAACTA
AAAAACCAAAATAAAAAAAAGCCCAACGGGTGGAGAACGATTAATTCGTT
AGTACACAAAATTCGACTTCACGGTCGACGAGGAAAGGAATGGCTAAATC
CTTCTCGCGACAAAAATCAAGGCACGCACCGCAGAAGGAAGGTGGATTAA
AAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCAACG
AACTTGATGTCCAGAATGGATGGGAAGAAAACACACACACACACACGGAG
CACTTCATATGGTGTGAAGGGAAGATTCCGCCTGCTTCCCACATTGAGCT
ATGTTTGCACAGGTTATGTTTTCCGTCGAAGGACGAAGGGTGAGGTCACG
GTAGCAGGTCTTACGTTGGGACGCCGCGGTTGTTCTTGTTGCTGACATGC
ATCTGGTACCAACCCGAGCTACTCGTACAAAATCTATTTTGATTACTTGT
AAGTATGTATGGTCATCACATAGAGTCTATAGCAAGAGAACGATCAACCG
GGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTTTGTTCGCGCCTGAGAAT
TTGGTCTCGCGAGACGGATTCGGCAGTCTCGTCCCGCGTCAGCCTGCTCA
TCTCCATACTCAGGCTGAAACGGGATTCCTTCCGAGTTCCGCGGTGGCGT
CCATTTATTTATTTAAACCGCCATACGCCAATGGGACAGTCCCGAGTTTA
TCGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCGAGAGTCCGCCG
GCACAGGGAGAGTAGCCCTCGAGGTAATTCCAAACGGGTGCTGCCTTGGC
AGGTCACCATGGACCAATTACTATGCGCCTCTCTTTTCCCACACCCACTA
TTGGTATGAAGTGGTTATAGCATGTTGAAAGTATCGCCGGTACTTCTGTA
CCACGGTGACCAACCCTCCTTGTATTGTGTATTGTACGAGAAAATCGGCA
AAAAAAGTGATGGAAGGATAGAGATAGAGCTCTCTCTCGATTGCAAACGC
CACAGGTATTATAGTCCCCGGAAGAAGTTGTTGGTATTTTAGTCACGTTC
AGCAGATATTAAATACCTGGTATTATTAATAGTGGCATCGAACGTTTATA
TATTACAGTATTATTAATAGCAGTTAGTTGCCAATCCTGCCAATATCACC
GTGTACTGAAACACAGGTCAAGTGTGTGTGTGTATGTATTAGGTGTGTGG
GTGTATTTATGAAATTGCACATAACCGGGCAATCCTGCCCTGTCATCCTA
TTAATAGTCATTCTATGCTACTCGCATTGGTCCTCCCCAGGGGTGTTAAA
GGATGACGATACTTATTACGGAAAGCTCTAATCAGACGCGGCGAAGGGGA
AAATCACTATATTTACTTGTACAGTTCTTCCTTATTAATAAGCCCTGAGT
GTATTGCGCTTCCCTCCCTCCTCCCTTCCTATTCTATTCTATAGATTATA
TGTGTCGGCATTAATAGCTACTGAACCAACACTCCCTTTTCTACGTTTTT
GTCCTATTTCCGCCCCAAGTCTCCCCGTTTCCCACCCTCCACACACGGTG
CCGACTTTCAACAGCTCGTCGCCATGGCTCGCTCTCAAAGCCGTGGCCGC
GACTACAGCAGCGGCGGAGGCGCAAGTCGCAGCAGCAGTCGAAGTCCCGA
TCGATCACGCCGCAGGTCGAGATCACTCTCGCCGCGGAGAGACGATCACC
GCGGCGGTGGGCGAGTTGGCGGTGGGGGAAGGGACAGATCGGCTGAACCG
AGAGGGTCCGTCGGAAAGCGCGACGGCAGCCGAGGGCGTCGGAACGATTC
GCGGGACGACAGGCGAGGTGGTGACTACGTTCCGGGCTCGGGAGAGAGGG
GTCGAGGCGTGGACATGAGCAGAAGGGATCGCTCGCGAGATCGCGGCCGC
AGTGGAAGTATTGAGCAAGATCACCGGCGAGATGGAGGCGGCGGGGGGTA
CCGTTATCGGAAAACCGACAAGGATAGGTCCAGGAGCAGCAGTTCGAGAA
AAGAGTCCGCTCGAGTCGAGAGCAGAGACCGGTCCGGATTTGGAGATAGA
GAGAGGGATCGTGGTATT back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1046:14165..23532- >mRNA_A-nodosum_M_contig1046.6.1 ID=mRNA_A-nodosum_M_contig1046.6.1|Name=mRNA_A-nodosum_M_contig1046.6.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=600bp|location=Sequence derived from alignment at A-nodosum_M_contig1046:14165..23532- (Ascophyllum nodosum dioecious)
CTCTTTTCGCTGTCTGTTGTGGTAGAATTGGGCGCCCTTGCTTTCGTTCG
CCTCTCAAGAGATCATCCTCCGTCGCCGGGTTTCAGGGGAGGGAAGCTCG
TCGCCATGGCTCGCTCTCAAAGCCGTGGCCGCGACTACAGCAGCGGCGGA
GGCGCAAGTCGCAGCAGCAGTCGAAGTCCCGATCGATCACGCCGCAGGTC
GAGATCACTCTCGCCGCGGAGAGACGATCACCGCGGCGGTGGGCGAGTTG
GCGGTGGGGGAAGGGACAGATCGGCTGAACCGAGAGGGTCCGTCGGAAAG
CGCGACGGCAGCCGAGGGCGTCGGAACGATTCGCGGGACGACAGGCGAGG
TGGTGACTACGTTCCGGGCTCGGGAGAGAGGGGTCGAGGCGTGGACATGA
GCAGAAGGGATCGCTCGCGAGATCGCGGCCGCAGTGGAAGTATTGAGCAA
GATCACCGGCGAGATGGAGGCGGCGGGGGGTACCGTTATCGGAAAACCGA
CAAGGATAGGTCCAGGAGCAGCAGTTCGAGAAAAGAGTCCGCTCGAGTCG
AGAGCAGAGACCGGTCCGGATTTGGAGATAGAGAGAGGGATCGTGGTATT back to top
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