mRNA_A-nodosum_M_contig1042.14.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1042.14.1
Unique NamemRNA_A-nodosum_M_contig1042.14.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1042.14.1 vs. uniprot
Match: A0A6H5KQA5_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA5_9PHAE)

HSP 1 Score: 419 bits (1078), Expect = 7.570e-122
Identity = 284/568 (50.00%), Postives = 337/568 (59.33%), Query Frame = 3
Query: 1125 DGRVSVLCRFKCFQE---EESLDSSRDWLRFSESA----------SGEQAVSEQDTVNLRVGCSWSERAFDKVFRPGDGQEQVFAQVERVAHGVAEGFNGTVFAYGQTGSGKTYTMMGRGLTDTRSFTDY---------PVRSSADERLEPKDH---LDTLPEQQQSPSPPHTVKPDK-----------------------------------------------------PTEHAV-AQAPVTDGGKKGASASG---------------LGTEAGVIPRAVARVLRDAHARREQGWEFFLSATFVEIYNEKIRDLLEPSNDNLKVTENP-GRGMEAAGATEVQISTLEEALEVLRAGARYRMTAPTLMHEASSRSHSIFMLRLEQHDAVRNCKVSARLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSENAPHVPFRDSKLTRLLQESLGGNSRTVLVVCCSPEQVHFRETLSTLKFGECAKRVTTFVSANVVAAPDEVAAQLSELRGEMVRLKRQLHDLRLREARK-EAALSRGRNKSRRTYSIAAVRSLRGGG 2540
            D RV VLCRF+   E   EE       WL F               GE A    DTV++R+G +WS R FD+V +PG  Q QV++ V+RVAHGV++GFNGT+FAYGQTG+GKTYTM G   T +               P    A        H      LP        P    P+                                                      P+ HA  A +P T       ++SG               LG E GVIPRAV+ +L DA ARR QGWEF L+AT+VEIYNEKIRDLL P+NDNL+V E+P GRG+EAAGA EV++++LEEA+ VL+ GA +R TA TLM+  SSRSHSIFMLRL+Q     +CKVSARLTLVDLAGSERAGK G+EG+ LEEA+SINVSLHTLGRVIR LSEN PHVPFRDSKLTRLLQESLGGNSR        P++   +ETLSTLKFGECAKRVTTF SANVVAAPD+V+ QLSELR E+VRLKRQLHD +LREAR+ EA  S G  +S R+  +   R+  GGG
Sbjct:  129 DDRVRVLCRFRRTVERDGEERGSPRGKWLVFGGGXXXXXXXXXHEGGEGAP--LDTVSVRMGGAWSTRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGAGKTYTMGGATATLSAXXXXXXXXXXGVTTPSGGGAXXXXXXPCHPGSAGVLPXXXXXXXSPFAGAPEATPTNLAPVPASPXXXXXXXXXXXXXXXXXXXXXXLXXXLPDGPGRRLHPIGIMPSSHAAGAVSPET-------ASSGXXXXXXXXXXXXSCCLGPEVGVIPRAVSTLLADAEARRAQGWEFALTATYVEIYNEKIRDLLNPANDNLQVKEHPSGRGVEAAGAKEVRVTSLEEAVGVLKKGAEHRATAATLMNNVSSRSHSIFMLRLDQ-----DCKVSARLTLVDLAGSERAGKTGVEGKRLEEANSINVSLHTLGRVIRTLSENGPHVPFRDSKLTRLLQESLGGNSR--------PDEAQAQETLSTLKFGECAKRVTTFASANVVAAPDKVSQQLSELRAEVVRLKRQLHDCQLREARRSEAFPSIGGRRSSRSSMLMGERASTGGG 674          
BLAST of mRNA_A-nodosum_M_contig1042.14.1 vs. uniprot
Match: D8LL94_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL94_ECTSI)

HSP 1 Score: 400 bits (1029), Expect = 1.150e-119
Identity = 214/295 (72.54%), Postives = 249/295 (84.41%), Query Frame = 3
Query: 1662 EAGVIPRAVARVLRDAHARREQGWEFFLSATFVEIYNEKIRDLLEPSNDNLKVTENP-GRGMEAAGATEVQISTLEEALEVLRAGARYRMTAPTLMHEASSRSHSIFMLRLEQHDAVRNCKVSARLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSENAPHVPFRDSKLTRLLQESLGGNSRTVLVVCCSPEQVHFRETLSTLKFGECAKRVTTFVSANVVAAPDEVAAQLSELRGEMVRLKRQLHDLRLREARK-EAALSRGRNKSRRTYSIAAVRSLRGGG 2540
            + GVIPRAV+ +L DA ARR QGWEF L+AT+VEIYNEKIRDLL P+NDNL+V E+P GRG+EAAGA EV++++LEEA+ VL+ GA +R TA TLM+  SSRSHSIFMLRL+Q D V +CKVSARLTLVDLAGSERAGK G EG+ LEEA+SINVSLHTLGRVIR LSEN PHVPFRDSKLTRLLQESLGGNSRTVL++CCSP++   +ETLSTLKFGECAKRVTTF SANVVAAPD+V+ QLSELR E+VRLKRQLHD +LREAR+ EA  S G  +S R+  +   R+  GGG
Sbjct:   68 QVGVIPRAVSTLLADAEARRAQGWEFALTATYVEIYNEKIRDLLNPANDNLQVKEHPSGRGVEAAGAKEVRVTSLEEAVGVLKKGAEHRATAATLMNNVSSRSHSIFMLRLDQRDVVHDCKVSARLTLVDLAGSERAGKTGAEGKRLEEANSINVSLHTLGRVIRTLSENGPHVPFRDSKLTRLLQESLGGNSRTVLIICCSPDEAQAQETLSTLKFGECAKRVTTFASANVVAAPDKVSQQLSELRAEVVRLKRQLHDCQLREARRSEAFPSIGGRRSSRSSMLMGERASTGGG 362          
BLAST of mRNA_A-nodosum_M_contig1042.14.1 vs. uniprot
Match: A0A5A8CHJ4_CAFRO (Kinesin motor domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CHJ4_CAFRO)

HSP 1 Score: 243 bits (620), Expect = 1.120e-61
Identity = 173/433 (39.95%), Postives = 232/433 (53.58%), Query Frame = 3
Query: 1119 DSDGRVSVLCRFKCFQEEESLDSSRDWLRFSESASGEQAVSEQDTVNLRVGCSWSER-AFDKVFRPGDGQEQVFAQVER-VAHGVAEGFNGTVFAYGQTGSGKTYTMMGRGLTDTRSFTDYPVRSSADERLEPKDHLDTLPEQQQSPSPPHTVKPDKPTEHAVAQAPVTDGGKKGASASGLGTEAGVIPRAVARVLRDAHARREQGWEFFLSATFVEIYNEKIRDLLEPSNDNLKVTENPGRGMEAAGATEVQISTLEEALEVLRAGARYRMTAPTLMHEASSRSHSIFMLRLEQHDAVRNCKVSARLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSEN-APHVPFRDSKLTRLLQESLGGNSRTVLVVCCSPEQVHFRETLSTLKFGECAKRVTTFVSANVVAAPDEVAAQLSELRGEM 2408
            +S   + V+CRF+     E  +   D      +  GE   +    V+L      S    FDKVF     QEQV+A   R V     EGFN  + AYGQTGSGKT+TM G   T +      P+                     +SP P    + D            +DG   GA  +    + GVIPR VAR L +     ++  EF +S + VEIY EKIR LL+PS  NL+V E+P +G+     TEV +   +E L VLRAG   R  A T M+  SSRSHS+FML L + D+ R    S+RL LVDLAGSE   K G+ G+ L+EA  IN SL  LG VI+ L++  A HVP+R+SKLTR+LQE LGGN+RT LV+CCSP   +  ETLSTL+FG+ AK++    + N   +PD++   +++L  E+
Sbjct:   20 ESRDNIKVICRFRPLNARERREQGDDRC----AVYGEAGTA----VSLHTADQASHTFRFDKVFDEASTQEQVYAAAGRPVIAAALEGFNSCLLAYGQTGSGKTFTMTGADATVSSDADGVPL---------------------ESPGPATPARAD------------SDGEGGGAPPA---ADMGVIPR-VARDLFEYAMDADETVEFSISVSMVEIYMEKIRCLLDPSKANLQVGEDPSKGVYLKEVTEVDVVDEDELLRVLRAGNANRAVAATGMNAGSSRSHSLFMLHLVKRDSARGESRSSRLYLVDLAGSETVNKTGVSGQQLQEAMKINQSLSALGNVIKALTDGKATHVPYRNSKLTRVLQECLGGNARTALVICCSPSIFNQAETLSTLRFGKRAKQIRNRATVNRERSPDQMRRYIAQLEAEL 407          
BLAST of mRNA_A-nodosum_M_contig1042.14.1 vs. uniprot
Match: W7U3F9_9STRA (Kinesin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3F9_9STRA)

HSP 1 Score: 236 bits (602), Expect = 9.030e-61
Identity = 166/432 (38.43%), Postives = 223/432 (51.62%), Query Frame = 3
Query: 1134 VSVLCRFKCFQEEESLDSSRDWLRFSESASGEQAVSEQDTVNLRVGCSWSERAFDKVFRPGDGQEQVFAQVERVAHGVAEGFNGTVFAYGQTGSGKTYTMMGRGLTDTRSFTDYPVRSSADERLEPKDHLDTLPEQQQSPSPPHTVKPDKPTEHAVAQAPVTDGGKKGASASGLGTEAGVIPRAVARVLRDAHARREQGW---EFFLSATFVEIYNEKIRDLLEPSND-NLKVTENPGRGMEAAGATEVQISTLEEALEVLRAGARYRMTAPTLMHEASSRSHSIFMLRLEQHDAVRNCKVSARLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSENAPHVPFRDSKLTRLLQESLGGNSRTVLVVCCSPEQVHFRETLSTLKFGECAKRVTTFVSANVVAAPDEVAAQLSELRGEMVRL 2417
            V V+CRF+  +EEE      +W +  E +      + + T+N          AFD+VF     Q  V+  V  V  G+ +GFNGT+ AYGQTGSGKTYTMMGR    T      P                      +SP P                            ++G     G IPR    V+ D  A  E+     EF +  + VE+Y EK+RDLL PS   +LK+ ++P  G+   GATE+ + +  E   V+ AG   R+TA T M+E SSRSH++ ++++ Q +         +L +VDLAGSER  K   EG  LEEA +IN SL TLG VI  L + APHVP+RD+KLTRLL ESLGGNS T L+VCC+PE  H +E++STL+FGE AK+V      N   +  E+  QL    GE+ RL
Sbjct:  104 VQVVCRFRPLREEEPF----EWYKAVEDSGAVSVNTSERTLNF---------AFDRVFGSQATQADVYGSVRHVVLGLLDGFNGTILAYGQTGSGKTYTMMGRPEKRTNPVYGRP----------------------ESPRP----------------------------STGHSEGVGFIPR----VVDDLFAMVEEFQDTIEFTICVSCVEVYCEKVRDLLNPSRSADLKLRDDPYGGVVVMGATEIFVESQAEMHSVIEAGQLGRVTAATGMNEESSRSHALLLVKVTQKNTETEHIRRGKLVMVDLAGSERIAKTRAEGLRLEEAKNINRSLTTLGMVISALVDGAPHVPYRDAKLTRLLAESLGGNSNTCLIVCCAPELSHSQESISTLRFGERAKKVKNHAVRNEELSIYELREQLRCALGEIERL 468          
BLAST of mRNA_A-nodosum_M_contig1042.14.1 vs. uniprot
Match: A0A7S1NQ19_9EUGL (Kinesin-like protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NQ19_9EUGL)

HSP 1 Score: 226 bits (577), Expect = 3.830e-58
Identity = 149/381 (39.11%), Postives = 203/381 (53.28%), Query Frame = 3
Query: 1293 FDKVFRPGDGQEQVFAQVER-VAHGVAEGFNGTVFAYGQTGSGKTYTMMGRGLTDTRSFTDYPVRSSADERLEPKDHLDTLPEQQQSPSPPHTVKPDKPTEHAVAQAPVTDGGKKGASASGLGTEAGVIPRAVARVLRDAHARREQGWEFFLSATFVEIYNEKIRDLLEPSNDNLKVTEN--PGRGMEAAGATEVQISTLEEALEVLRAGARYRMTAPTLMHEASSRSHSIFMLRLEQHDAVRNCKVSARLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSEN-APHVPFRDSKLTRLLQESLGGNSRTVLVVCCSPEQVHFRETLSTLKFGECAKRVTTFVSANVVAAPDEVAAQLSELRGEMVRLKR 2423
            FDKV++    Q  +F    R +   V +G+NGT+F YGQTGSGKT+TMMG  L+  + + D P             HL                                                G+IPR V  +        ++  EF L  ++VEIY E+IRDLL+    NL++ E+   GRG+  A ATE  +   +E   +++ GA  R  A T M++ SSRSHSIF + + Q   V+  + S +L LVDLAGSER GK+ +EG+ LEEA  IN SL TLG VI  L++  + HVP+RDSKLTRLLQ+S+GGNSRT L+VCCSP + +  ETLSTL+FGE AK++      N      E+ A L +   E+  LK+
Sbjct:   80 FDKVYQSDVKQSDIFDFTGRQIVEDVFKGYNGTIFVYGQTGSGKTHTMMGPNLSGLQGYCDDP-------------HLK-----------------------------------------------GIIPRVVETIFNSVE-EADEAIEFTLKVSYVEIYMERIRDLLDTKKVNLQLHEDFRSGRGVYVADATEAYVCDADEVFRLMQTGASNRTVANTRMNDESSRSHSIFQITITQKHNVKMEQKSGKLFLVDLAGSERTGKSKVEGQQLEEAKLINKSLSTLGMVINALTDKRSTHVPYRDSKLTRLLQDSVGGNSRTTLIVCCSPSKYNDYETLSTLRFGERAKKIKNKAKINREWTVAELKALLEKAEREISHLKK 399          
BLAST of mRNA_A-nodosum_M_contig1042.14.1 vs. uniprot
Match: Q4GZ84_TRYB2 (Kinesin-like protein n=4 Tax=Trypanozoon TaxID=39700 RepID=Q4GZ84_TRYB2)

HSP 1 Score: 228 bits (581), Expect = 4.120e-58
Identity = 147/384 (38.28%), Postives = 210/384 (54.69%), Query Frame = 3
Query: 1290 AFDKVFRPGDGQEQVFAQVER-VAHGVAEGFNGTVFAYGQTGSGKTYTMMGRGLTDTRSFTDYPVRSSADERLEPKDHLDTLPEQQQSPSPPHTVKPDKPTEHAVAQAPVTDGGKKGASASGLGTEAGVIPRAVARVLRDAHARREQGWEFFLSATFVEIYNEKIRDLLEPSNDNLKVTENPGRGMEAAGATEVQISTLEEALEVLRAGARYRMTAPTLMHEASSRSHSIFMLRLEQHDAVRNCKVSARLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSENAPHVPFRDSKLTRLLQESLGGNSRTVLVVCCSPEQVHFRETLSTLKFGECAKRVTTFVSANVVAAPDEVAAQLSELRGEMVRLKRQLHDL 2438
            +F +V+ P  GQ++++ +V R +   V +G+NGT+  YGQTGSGKT+TM G G    R       RS           + T                      A+      D G   A        AG+IPRAV ++    H+  ++  EF + A FVE+Y E++RDLL+  N NL+V E P  G          +S+ EE ++++ +G   R+TA T  +EASSRSH +  + ++  +  ++     +L LVDLAGSE+  K  ++G  LEEA  IN SL TLG VI  L++   HVP+RDSKLTR+L++SLGGNSRT LVVCCSP Q + +ETLSTL+FG  A+ V      N     +E+   L   R E+ RL++ LHD+
Sbjct:   87 SFARVYPPEVGQDEIYNEVARPIVKDVMKGYNGTLLVYGQTGSGKTHTMFGAGEAVGRE------RSGT---------IST----------------------ALYGTAGDDRGPVRAQGGRANVNAGIIPRAVNQIFDMIHSA-DEALEFEIRAMFVEVYMERVRDLLDHGNLNLQVREGPS-GFYVENCKLPYVSSAEEMMQLINSGVCRRVTAATACNEASSRSHCVLNITVKSVNHTKHVATVGKLFLVDLAGSEKVAKTHVDGMQLEEAKMINKSLTTLGHVIMSLADKQAHVPYRDSKLTRILKDSLGGNSRTALVVCCSPSQFNDQETLSTLRFGARAQNVCNVAIVNKQLTAEELKGMLDLARVEIKRLRKLLHDM 431          
BLAST of mRNA_A-nodosum_M_contig1042.14.1 vs. uniprot
Match: A0A1I7ST56_BURXY (Kinesin-like protein n=2 Tax=Bursaphelenchus TaxID=6324 RepID=A0A1I7ST56_BURXY)

HSP 1 Score: 223 bits (567), Expect = 3.670e-56
Identity = 146/384 (38.02%), Postives = 193/384 (50.26%), Query Frame = 3
Query: 1293 FDKVFRPGDGQEQVF-AQVERVAHGVAEGFNGTVFAYGQTGSGKTYTMMGRGLTDTRSFTDYPVRSSADERLEPKDHLDTLPEQQQSPSPPHTVKPDKPTEHAVAQAPVTDGGKKGASASGLGTEAGVIPRAVARVLRDAHARREQGWEFFLSATFVEIYNEKIRDLLEPSNDNLKVTENPGRGMEAAGATEVQISTLEEALEVLRAGARYRMTAPTLMHEASSRSHSIFMLRLEQHDAVRNCKVSARLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSENAP-HVPFRDSKLTRLLQESLGGNSRTVLVVCCSPEQVHFRETLSTLKFGECAKRVTTFVSANVVAAPDEVAAQLSELRGEMVRLKRQLHDL 2438
            FD+VF P   QE V+      +   V  G+NGT+FAYGQT SGKT+TM G+               S DE                   P H                                  GVIPR +  +    +   +Q  EF +  ++ EIYNEKIRDLL  S  NL + E   R     G TE  +S   E LE+++ G   R  A T M+E SSRSHS+F+++++Q +     K+S +L LVDLAGSE+  K G EG  LEEA +IN SL  LG VI  L++    H+P+RDSKLTR+LQESLGGNSRT +V+CCSP   +  ET STL FG+ AK +   V  N      E   +  + R ++ +L+ QL  L
Sbjct:   49 FDRVFDPSCDQETVYKGSAHHIVQDVLSGYNGTIFAYGQTSSGKTHTMEGQ--------------MSVDEA-----------------DPNH----------------------------------GVIPRIINDIFTHIYNMEDQALEFHIKVSYFEIYNEKIRDLLNISQTNLTIHEGKDRVPYVKGVTETFVSNFVEVLEIIKEGQNNRQKAVTNMNEHSSRSHSVFLIQVDQENKQLQKKLSGKLYLVDLAGSEKVSKTGAEGTVLEEAKNINKSLSALGNVISSLADGTKGHIPYRDSKLTRILQESLGGNSRTTIVICCSPASFNEAETKSTLMFGQRAKTIKNVVVVNQELTAAEWKRRYEQEREKVTQLRNQLKSL 367          
BLAST of mRNA_A-nodosum_M_contig1042.14.1 vs. uniprot
Match: A0A8H7UEN4_MORIS (Kinesin-like protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UEN4_MORIS)

HSP 1 Score: 222 bits (566), Expect = 5.740e-56
Identity = 144/382 (37.70%), Postives = 195/382 (51.05%), Query Frame = 3
Query: 1290 AFDKVFRPGDGQEQVFA-QVERVAHGVAEGFNGTVFAYGQTGSGKTYTMMGRGLTDTRSFTDYPVRSSADERLEPKDHLDTLPEQQQSPSPPHTVKPDKPTEHAVAQAPVTDGGKKGASASGLGTEAGVIPRAVARVLRDAHARREQGWEFFLSATFVEIYNEKIRDLLEPSNDNLKVTENPGRGMEAAGATEVQISTLEEALEVLRAGARYRMTAPTL------MHEASSRSHSIFMLRLEQHDAVRNCKVSARLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSEN-APHVPFRDSKLTRLLQESLGGNSRTVLVVCCSPEQVHFRETLSTLKFGECAKRVTTFVSANVVAAPDEVAAQLSELRGEMV 2411
            AFDKVF     Q+++F   ++ +   V  G+NGTVFAYGQTGSGKT+TMMG  + D R+                                                                    G+IPR V ++ +          EF +  +++EIY EK+RDLL PS DNL + E+  +G+   G  EV +++ EE  EV+R G   R+ A T       M+  SSRSHSI  + + Q +       S +L LVDLAGSE+ GK G  G+ LEEA  IN SL  LG VI  L++  + H+P+RDSKLTR+LQESLGGNSRT L++ CSP   + +ETLSTL+FG  AK +      NV  +P E+ A L  ++ E V
Sbjct:   59 AFDKVFGMETEQQEIFEYSIKSIVDDVVAGYNGTVFAYGQTGSGKTFTMMGSDIDDERNK-------------------------------------------------------------------GIIPRIVEQIFQSI-LMAPANMEFTVKVSYMEIYMEKVRDLLNPSQDNLPIHEDKLKGVYVKGLLEVYVASTEEVFEVMRRGGNARVVAYTSKYLDRHMNAESSRSHSIVQITITQKNLDTGAAKSGKLYLVDLAGSEKVGKTGASGQTLEEAKKINKSLTALGMVINNLTDGKSSHIPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNEQETLSTLRFGIRAKTIKNKAKVNVDLSPAELKALLKRVKAEAV 372          
BLAST of mRNA_A-nodosum_M_contig1042.14.1 vs. uniprot
Match: A0A7S4LAL5_9EUGL (Kinesin-like protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LAL5_9EUGL)

HSP 1 Score: 218 bits (554), Expect = 1.610e-55
Identity = 150/381 (39.37%), Postives = 196/381 (51.44%), Query Frame = 3
Query: 1293 FDKVFRPGDGQEQVFAQVER-VAHGVAEGFNGTVFAYGQTGSGKTYTMMGRGLTDTRSFTDYPVRSSADERLEPKDHLDTLPEQQQSPSPPHTVKPDKPTEHAVAQAPVTDGGKKGASASGLGTEAGVIPRAVARVLRDAHARREQGWEFFLSATFVEIYNEKIRDLLEPSNDNLKVTEN--PGRGMEAAGATEVQISTLEEALEVLRAGARYRMTAPTLMHEASSRSHSIFMLRLEQHDAVRNCKVSARLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSEN-APHVPFRDSKLTRLLQESLGGNSRTVLVVCCSPEQVHFRETLSTLKFGECAKRVTTFVSANVVAAPDEVAAQLSELRGEMVRLKR 2423
            FDKV+     Q  VF    R +   V EG+NGT+FAYGQTGSGKT+TMMG      R + + P                                                               G+IPR V ++        ++  EF L  ++VEIY E+IRDLL+ S  NL++ E+   GRG+  A ATE  +S  EE   +++ GA  RM A T M+  SSRSHSIF + + Q    R  + S +L LVDLAGSE A K+  EG+ LEEA  IN SL TLG VI  L++  A HVP+RDSKLTRLLQ+S+GGNSRT L+VC SP   +  ETLSTL+FGE AK +      N      E+   L++   E+  L++
Sbjct:   67 FDKVYLEDAKQSDVFDFTGRQIVEDVFEGYNGTIFAYGQTGSGKTHTMMGPSQAGLRGYCNDPDLK------------------------------------------------------------GIIPRVVEKMFSCVE-EADEAIEFTLKVSYVEIYMERIRDLLDTSKTNLQLHEDFASGRGVYVADATEAYVSDAEELFHLMQTGAANRMVASTRMNSESSRSHSIFTIAVTQKHNGRGEQKSGKLCLVDLAGSESAHKSKAEGQQLEEAKQINKSLTTLGMVINALTDKKATHVPYRDSKLTRLLQDSVGGNSRTTLIVCGSPSASNEGETLSTLRFGERAKNIKNNAKINRDWTVAELKVMLAKANREIALLRK 386          
BLAST of mRNA_A-nodosum_M_contig1042.14.1 vs. uniprot
Match: UPI001CFE0452 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFE0452)

HSP 1 Score: 216 bits (549), Expect = 8.490e-55
Identity = 138/393 (35.11%), Postives = 210/393 (53.44%), Query Frame = 3
Query: 1293 FDKVFRPGDGQEQVFAQVER-VAHGVAEGFNGTVFAYGQTGSGKTYTMMGRGLTDTRSFTDYPVRSSADERLEPKDHLDTLPEQQQSPSPPHTVKPDKPTEHAVAQAPVTDGGKKGASASGLGTEAGVIPRAVARVLRDAHARREQGWEFFLSATFVEIYNEKIRDLLEPSNDNLKVTENPGRGMEAAGATEVQISTLEEALEVLRAGARYRMTAPTLMHEASSRSHSIFMLRLEQHDAVRNCKVSARLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSENA--PHVPFRDSKLTRLLQESLGGNSRTVLVVCCSPEQVHFRETLSTLKFGECAKRVTTFVSANVVAAPDEVAAQLSELRGEMVRLKRQLHDLRLREARKE 2462
            FDK+F     QE++F  V + V   V +G+NGT+F YGQTGSGK++TMMG G  D + F+D+P                                                               G+IPR++  + +      +  +   +  +F+EIY E+I+DLL+P    LK+     +G+   GA EV++ T +E   +L+ GA +R+ + T M+  SSRSH+IF+L L Q +   +     +L LVDLAGSE+  K G  G  LEEA  IN SL  LG VI  LS+++   HVP+RDSKLTRLL++S+GGNSRT L++ CS   ++  ETLSTL+FG  AKR+   V  N   +  E+ + L + + E+++L++ ++ L++++   E
Sbjct:  151 FDKIFNDHSTQEEIFEFVGKPVIEDVCKGYNGTIFTYGQTGSGKSFTMMGAG-EDIKGFSDHPKLK------------------------------------------------------------GIIPRSIDYLFQVIEENSDVSYT--IDVSFIEIYMERIKDLLDPVQKQLKIERKEPKGVFVKGAKEVRVHTSKEIFHLLKKGASHRVISSTRMNSESSRSHTIFILSLSQKNRTTSETKYGKLILVDLAGSEKTKKTGAVGTTLEEAKQINKSLSALGMVIYALSDSSGSKHVPYRDSKLTRLLEDSIGGNSRTKLIINCSMSTLNDEETLSTLRFGSRAKRIQNKVKVNRELSQKELKSMLDKAKEEVLQLRQVINSLKVQQKEDE 480          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1042.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQA5_9PHAE7.570e-12250.00Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
D8LL94_ECTSI1.150e-11972.54Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A5A8CHJ4_CAFRO1.120e-6139.95Kinesin motor domain-containing protein n=5 Tax=Ca... [more]
W7U3F9_9STRA9.030e-6138.43Kinesin-like protein n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7S1NQ19_9EUGL3.830e-5839.11Kinesin-like protein n=1 Tax=Eutreptiella gymnasti... [more]
Q4GZ84_TRYB24.120e-5838.28Kinesin-like protein n=4 Tax=Trypanozoon TaxID=397... [more]
A0A1I7ST56_BURXY3.670e-5638.02Kinesin-like protein n=2 Tax=Bursaphelenchus TaxID... [more]
A0A8H7UEN4_MORIS5.740e-5637.70Kinesin-like protein n=1 Tax=Mortierella isabellin... [more]
A0A7S4LAL5_9EUGL1.610e-5539.37Kinesin-like protein n=1 Tax=Eutreptiella gymnasti... [more]
UPI001CFE04528.490e-5535.11uncharacterized protein n=1 Tax=Naegleria lovanien... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1042contigA-nodosum_M_contig1042:136746..144135 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LL94
PFAMsKinesin
Model size3848
Max annot lvl2759|Eukaryota
KEGG koko:K10396
KEGG Pathwayko04144,ko04728,map04144,map04728
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003774,GO:0003777,GO:0003779,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005871,GO:0005875,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007018,GO:0008017,GO:0008092,GO:0008104,GO:0008150,GO:0008574,GO:0009987,GO:0015630,GO:0015631,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0030029,GO:0030036,GO:0030705,GO:0032991,GO:0033036,GO:0042623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0046907,GO:0048471,GO:0051015,GO:0051017,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061572,GO:0071840,GO:0097435,GO:1990939
Exons9
Evalue8.62e-122
EggNOG OGsCOG5059@1|root,KOG0240@2759|Eukaryota
Descriptionmicrotubule motor activity
Cds size3339
COG categoryZ
BRITEko00000,ko00001,ko04131,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1042.14.1prot_A-nodosum_M_contig1042.14.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1042 136890..143770 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866416.3466377-UTR-A-nodosum_M_contig1042:136745..1368891680866416.3466377-UTR-A-nodosum_M_contig1042:136745..136889Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1042 136746..136889 -
1680866416.4633615-UTR-A-nodosum_M_contig1042:143770..1441351680866416.4633615-UTR-A-nodosum_M_contig1042:143770..144135Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1042 143771..144135 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866416.359051-CDS-A-nodosum_M_contig1042:136889..1372311680866416.359051-CDS-A-nodosum_M_contig1042:136889..137231Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 136890..137231 -
1680866416.3690927-CDS-A-nodosum_M_contig1042:137543..1383391680866416.3690927-CDS-A-nodosum_M_contig1042:137543..138339Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 137544..138339 -
1680866416.3787415-CDS-A-nodosum_M_contig1042:138602..1386861680866416.3787415-CDS-A-nodosum_M_contig1042:138602..138686Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 138603..138686 -
1680866416.3900728-CDS-A-nodosum_M_contig1042:138970..1390261680866416.3900728-CDS-A-nodosum_M_contig1042:138970..139026Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 138971..139026 -
1680866416.401679-CDS-A-nodosum_M_contig1042:139329..1395161680866416.401679-CDS-A-nodosum_M_contig1042:139329..139516Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 139330..139516 -
1680866416.4111373-CDS-A-nodosum_M_contig1042:140143..1403851680866416.4111373-CDS-A-nodosum_M_contig1042:140143..140385Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 140144..140385 -
1680866416.422622-CDS-A-nodosum_M_contig1042:140967..1411471680866416.422622-CDS-A-nodosum_M_contig1042:140967..141147Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 140968..141147 -
1680866416.4389918-CDS-A-nodosum_M_contig1042:141422..1419081680866416.4389918-CDS-A-nodosum_M_contig1042:141422..141908Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 141423..141908 -
1680866416.4478197-CDS-A-nodosum_M_contig1042:142804..1437701680866416.4478197-CDS-A-nodosum_M_contig1042:142804..143770Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 142805..143770 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1042.14.1

>prot_A-nodosum_M_contig1042.14.1 ID=prot_A-nodosum_M_contig1042.14.1|Name=mRNA_A-nodosum_M_contig1042.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1113bp
MVRGKSPLSKGSEALAYSYGKGDRANRADRGHHHAHKLSRGSSTLGTMGK
ASVSEKLPSVISGTDLENSEPDAAGAANAQSTIDSHRAELSTRKGGLERS
GAEGMLSAQCGAAISRRSSYSSSEAPLAARPGDTEADIDGDAGIARDGDR
AKSLSSPNTLRASSMFVSSNNSSCGDCGSNGVRGSDCLTNGEHGPAGIEI
LPTPPTPSPVAMTATVAIPSQDQAGGVLSSNTTDIDANGTVKSEVAQTLP
GDSDGRVSVLCRFKCFQEEESLDSSRDWLRFSESASGEQAVSEQDTVNLR
VGCSWSERAFDKVFRPGDGQEQVFAQVERVAHGVAEGFNGTVFAYGQTGS
GKTYTMMGRGLTDTRSFTDYPVRSSADERLEPKDHLDTLPEQQQSPSPPH
TVKPDKPTEHAVAQAPVTDGGKKGASASGLGTEAGVIPRAVARVLRDAHA
RREQGWEFFLSATFVEIYNEKIRDLLEPSNDNLKVTENPGRGMEAAGATE
VQISTLEEALEVLRAGARYRMTAPTLMHEASSRSHSIFMLRLEQHDAVRN
CKVSARLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSE
NAPHVPFRDSKLTRLLQESLGGNSRTVLVVCCSPEQVHFRETLSTLKFGE
CAKRVTTFVSANVVAAPDEVAAQLSELRGEMVRLKRQLHDLRLREARKEA
ALSRGRNKSRRTYSIAAVRSLRGGGRVGEITYNSGEESSFGALSPSPAPG
RRETALDSTMSFDTARPSLSKRGLRLAQQSYSKTSPRHRPWWSEDECDLA
AATAYASAGAGVRTVWARELGVLRGGSAVSLMPHASGSAGMLGRLARRKE
ITPRNLVPELEHEEGHEKPPAMSPKRSSGGNPQVVQLNKPVVISGDVEGG
SWSCDPEKKREQRPSDAGREGTSESTSRGPAEMGLVATTDPRAAEEGTFV
VAGSNAGRALNPLVSAAEGEKDEGGYLPLILARLKQLEEGWTQRANAYEK
LLQLKDLRIQSLESACRHGYLAGQHGSRRNSMPALKTSNKDAATGTPAPF
ASVTSALSKRATGGIRARRTPMRGVAGNGKSAGARGNHAASKTPPGESSK
LSSVMTPPPPPS*
back to top

mRNA from alignment at A-nodosum_M_contig1042:136746..144135-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1042.14.1 ID=mRNA_A-nodosum_M_contig1042.14.1|Name=mRNA_A-nodosum_M_contig1042.14.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7390bp|location=Sequence derived from alignment at A-nodosum_M_contig1042:136746..144135- (Ascophyllum nodosum dioecious)
AAAACACCCCAGAGCCGAAATTTGAAATTTTGCCATATGTTTCATTCAGG ATTCTAGAGTCTGTTCAGTTGGCCTCGATTCGTTAGATTTTCGGTACAGT AAATAAAATACGGAGTACTCTGTGTAGGTCAGTCAGTACCTGTACTGGAG CTTTCGGCGTGCGGCTTGTAGGAGGTATACTCTGTTGTACTGGTACATAA AAAAAACAGACTGAGAGAAGAGCACTTCTGCGGGAGACAACTCTTACACT CTGACGTCACTTCCAACTTTTACGAAGCATTTTTCTCTTCACATTATTAC AAGTATCACTCGCCTCTTGCCGGAGTTCAGGGCACCCGTGTTGTTGCTGG TTGTCGTATTTTGAGATGGTCAGAGGCAAGTCTCCGCTTTCAAAGGGATC AGAAGCACTAGCTTATTCTTACGGCAAGGGTGATAGGGCGAATCGCGCCG ATCGCGGCCACCACCACGCCCATAAATTGAGTCGAGGGTCAAGCACTTTG GGGACAATGGGGAAAGCGTCTGTTTCAGAGAAACTTCCATCTGTGATTTC GGGGACCGACTTGGAAAACAGCGAACCAGACGCCGCGGGAGCTGCCAATG CCCAAAGTACCATCGACTCGCACAGGGCGGAGCTCTCTACAAGGAAAGGT GGATTAGAGAGATCAGGAGCGGAAGGAATGCTAAGTGCCCAATGCGGAGC GGCTATTTCTAGGCGATCCTCGTACTCCTCCTCTGAGGCACCTTTGGCTG CCAGACCGGGTGATACTGAAGCCGACATTGACGGCGATGCCGGTATTGCC CGCGACGGCGATCGGGCCAAATCGCTGTCGTCTCCCAACACATTGCGTGC ATCGAGCATGTTTGTCAGCAGCAACAACAGCAGTTGTGGTGACTGCGGTA GCAACGGCGTCAGAGGCAGCGATTGCCTGACTAATGGCGAACATGGCCCG GCGGGTATCGAAATCCTGCCGACTCCGCCGACACCCAGCCCGGTGGCAAT GACTGCAACAGTCGCTATCCCAAGTCAAGATCAGGCAGGAGGAGTTCTCT CATCCAATACCACCGACATCGATGCAAACGGTACGGTGAAGAGCGAAGTC GCTCAGACTCTCCCGGGCGATTCCGACGGTCGTGTGAGTGTCTTATGCCG CTTCAAGTGCTTCCAGGAGGAGGAGTCGCTCGACTCCTCCCGCGACTGGC TGCGGTTCAGCGAAAGCGCCAGCGGGGAGCAGGCCGTCAGCGAGCAGGAC ACTGTGAATCTACGGGTAGGGTGCTCTTGGAGCGAGAGAGCCTTTGACAA AGTGTTCAGACCCGGCGATGGTCAAGAGCAGGTGAGATTGCCGGAGAATG CTACTGTTTCTTGCGGAAAGGGAGAGGCTTGAACAGTTTATTATACTGCG ATGCAGTAACGTCGTGAGCAAAGCTCTTACCTTCAGATGTAAGCAAGCAA TAAGTGCTTCGAAGCAGGTAGGTGCAGTATTAATAACAGCACTAAACTCT GTATCCAGCCAGCCATTCCAGCAGCGGTCTCCAGGGACAAGCACGGGCAC GGGCCTCACCCAACTTCCAGGCTCACCGATTGGCGCAGGATGATTGGACA TGAGTCACGGTCATACGCCTAAAACTGCACGACTCTGGTACAAATATGTG TACTGGTGCCTGTAGTACACTGCTGTAGTCATATGATACAGTCAGTAACC TGTAACGGGGGATCTTGACAGAGAGTATTGTCTGTGTTGTATTGTAGTAC TAATCAATTTCATCGCCACGATCTTTGCAGCATTTCTCGGAAATTTGTCT TGTCGATAAAAAAGTATAGTATACTTGTAGGTGGGATAAATATCTTGGGC GTGTTTTTCCAAGAAAATCTGGAAGCATACAAATATTTTACGTAGTATTA GTATCTATATTAATATCAGTATAATAGAGCATCCACCCAGTCACGAGGGG AGGAAATAATGTCAAAAACATTTATTAATAGGTGGGAACATTGGCGGCTG TAAGAGACCCACGATGCTGCTATCACGTAAGAGTGCAGCACCTCCAGTCC TGATTATCCTATACTTCGAAGTATATTATTATTAGTTGTCGGCAGAGACA TTTTCGCCTCTCTTGCTGTCGCTGAGTGTCGATCCATCCGTACCATGCCT TCCCGCCAGGCCTCCTTCACACCGCTGATAAGTAACTCTCCGCCTTCTTC GCTCGCCCCCTTTTTCACCATGGGAAGGTCTTTGCACAGGTGGAACGTGT AGCTCACGGGGTGGCCGAAGGCTTCAACGGAACTGTCTTCGCCTACGGCC AAACGGGGTCGGGAAAAACCTACACCATGATGGGACGAGGTTTGACGGAC ACGCGGTCCTTCACCGATTACCCTGTTCGATCGAGTGCTGACGAGCGCTT GGAACCCAAAGATCATCTCGATACCCTGCCAGAACAACAGCAGTCGCCTT CGCCGCCGCACACGGTGAAACCAGACAAACCGACGGAGCACGCGGTTGCA CAAGCACCCGTTACCGATGGCGGCAAAAAAGGTGCTTCTGCGTCTGGATT GGGGACGGAGGCGGGGGTGATACCGAGGGCCGTCGCTAGGGTTTTGAGAG ACGCACACGCGCGCAGGGAGCAAGGGTGGGAGTTTTTCTTGTCGGCGACG TTCGTGGAAATCTACAACGAGAAGATACGCGACCTTTTGGAACCCTCCAA CGATAACCTCAAGGTATTGGCCAGGGGGGCCGAGGCGTCGGGCGGGGGAG TTCCAGGATCTTTTCGTTTTTGGAACGGGCTACGAGAATGCCTTCTCTGA CGTCGAACGCTTTCGCGCGCTCTCTCAGATAAGATATACGTGATATGCGA CGGTCGGTATGTGGGTAGCCCTTAGGCGTATTTCATAAATACATTCAGGG TAAAACAAGTGTCACCGCTATTCCACCCCGTCCGTCCCTAGTGTGATATG ATACTGTACCACGTTTTGGATTGGAATCGCCTGACCAGGTTACAGAGAAC CCCGGACGCGGCATGGAGGCTGCAGGCGCCACGGAAGTGCAGATTTCAAC GCTCGAGGAAGCCTTAGAGGTGCTGCGAGCGGGGGCAAGATACCGGATGA CGGCCCCAACGCTGATGCATGAAGCATCCAGCAGGAGCCACAGTATTTTC ATGCTGAGGCTAGAACAGGTGGGGGCGGTGAACGAGTGGGTTGACGGTCG ACCCTCCTCAGCATGTCTTTTTTTTTCGGTAGCAATGGCCGGATTACGGA CTCACTTTCTCGCTGTCTCTTTAGGCATGTTCACAGAAAGCTAACGAATG AGCATCAGTCAGAGCTGATCTTTATCAGGCGACAGCTAGAAAGGGGGCGT CCTCGGAGCGATGATCTTGTCGCCTCTCAGCCGAATGTCATGTAGCAGAA TACACATTTACTTTTTCTGTACTGGACGATACACATTTACCTCGTAGCAA TAGGCCAGCCACAGCTCATACGTGAACGAGTACGGTTATTGATGAGGGAG TCAGGATAGTGTACGGCCAGCGGCCTCGGCAACGATACGTCCGCAACTGA TCCATGCCTCGAACAAAGGACGACCCACGTTTCCACCGGTTCGCAGTGCC ACGCTCGTTTTTACGTGTCCTCCTATATCGCTGAGCTCCCGCTTGCCTCT TAAGCCGGCCCCTAACGTCGATCCCCGGCCCCCGGCCCTCCATGTCGCCT CTCTACCGCTGCTGTGGCGTGCGCTTCTCTCGACACCGTGTACACGATAG CATGACGCCGTGCGCAACTGTAAGGTTTCCGCCCGTCTCACCCTCGTGGA TCTGGCTGGTTCGGAAAGGGCGGGAAAGGCGGGGTTGGAAGGACGGCATC TTGAAGAGGCGAGCAGCATCAACGTCAGCCTGCACACCCTGGGCAGGGTC ATCCGGAAGCTGAGCGAGAACGCGCCGCACGTGCCTTTCCGCGACAGCAA GCTCACGCGCCTGTTGCAGGAGTCTCTCGGAGGCAATAGCCGGTGAGGCT CGTGAGGGTGCGATGCTCCACGATGTCGAAGTTCAGTTTCGAGTGCTGCG CTGTGGAGGGGCGTTTAGCGTTCCTTTTATTTCGTGAGGATCAAATTCAT TCGCACAGTAAATGGGCCTGTTCTACGCTCTGACCAGCAGTAACTATACA GTAGCTGCGGCATCCGTGGACGTTAGTGGGGGAGCCTCCTCCTGGCCTGG GCTAAGCCGCGCGTTTGTCCAGGTACTACGTACCAATATTTACGTGGCGC TGTCCCGGGAAACGTGGATACCGCTCCGCGCTTGGCAGCATCTTATCCCG TGGTTTGTCTCCCACTAGTCTGCCCGCTATTTCGCCGTTCTGCAGGCGCC GTCCCAATTTACAAGAAGGAGCTCATCATCGCTCCCCAGAACCCCTGCCA TGGATAATCCCCCGCACGCCGATTTGCCTATTATAGTATTACCTAGTAAT AGACTGAACCGAAGGAAGATTTCCGTAGATCATCTTGTGATGTAAAAACG TAATAATACGTGTCCCGTACGCTCCGTCCCCTTCTCTCTCCTCTGCGGCA ATCGCGCATCGGCGCAACGACGACGACGGCCGCCCACGCACGATCAACAA AACAAAATGTTTCGCCCAGCACGGTGCTGGTTGTTTGCTGCAGCCCCGAG CAAGTGCACTTTCGGGAGACCCTCTCCACTCTAAAATTTGGTGAATGTGC CAAGCGGGTGACCACATTCGTCTCTGCGAACGTCGTCGCCGCTCCGGACG AAGTCGCCGCCCAGCTGTCAGAGCTCCGGGGGGAAATGGTCCGACTCAAG CGACAGGTGACGGGGGGGGGGGGGCGCTGCTCGTCTCCATCTCAGGGGAT AGCTGTACATGAGATGATCGATGTCTCAAATTGAGCTGTCTTGACTCTCC GCTATGCGATTGAACTCGCCAACATGTTAGGATGCAGCCCGCTCGTTGAG CATTTCGAGAAGTAGAACGAGATTTGCCCAGCCTTTGCTAGCCATCGCCA AGGTCACCTGCTCCTCATCTTGATTCTGGTTTTTCTTTGTTTGTCGCTTT TCGATCACCACGCGTTAAACATGAATTATCAAACAAAAATTACGCTCGCC CTTGCGAAGCTCCACGACCTTCGGCTGCGGGAGGCGAGGAAGGAAGCCGC TCTGTCACGCGGAAGGTGCTACTGTAGATCTGTATGTTCGGAGAACATGA CAAGTCGTGTCCTTTTCGTTGGAGACGTTTTCCCCTTGCCGCTCCTGCGA CCAATCATGATGAGCAGCACGGGGTGATGTTCTTCCGTGATGCAGCGTGG AGCTTGGGCAGCGCTGCACGACGCGACGTTGTTTGCTCACCCGCGCGCGT CCTCTTTCGCCCCATATATCTTCACATTTCTCCCCCGGATCACGAACGCC TGAGCGCGCGAGATCGAAACCCGCCCGGTGCATTTTGATCTGTTCGCAGG AATAAATCCCGGAGGACCTATTCGATTGCGGCAGTGCGGTCCTTACGGGG AGGGGGAAGGGTCGGCGAAATTACTTACAACAGGTGAATAAAAGCACTTG TATTCACGTCCTTTTTTTTCGCGCTCTAAATGTGTATCTATGTTTAGCTG TACTAGCTGCGTACAGGTACCACAATCGGGTAGCCACTGGTCTGCATCTC TTACGTTCGTATGAACTTACCGTCGATAGGTCCAAAATCAGCAAATAAGT TGGCCCGGGGTTTTTCCCCCGTTCTTTCGCTTGCTGTCGACCCCGGCAGT CGCCTTATTACCCCTCTCCGTTCACTCTTACTCTGGCAATGCGCAGCGGT GAGGAGTCCTCGTTCGGGGCCTTGTCTCCATCCCCTGCCCCAGGCCGGAG GGAGACTGCCCTCGACTCGACTATGTCGTTCGACACGGCTCGACCATCGT TGTCCAAACGGGGCTTGAGGTTGGCGCAGCAATCTTACTCAAAAACAAGC CCGAGACACCGGCCTTGGTGGTCAGAAGATGAATGCGACCTTGCTGCTGC TACGGCCTATGCGTCGGCGGGGGCAGGGGTTAGGACGGTATGGGCGAGGG AGCTCGGCGTGCTCCGCGGTGGGTCGGCGGTGAGCCTTATGCCTCATGCA AGCGGGAGCGCTGGAATGCTTGGGCGGTTAGCACGCCGGAAGGAGATCAC CCCGCGGAACTTGGTTCCGGAGTTGGAGCACGAGGAAGGACACGAGAAGC CTCCCGCCATGTCTCCGAAGCGCTCGAGTGGTGGAAACCCTCAGGTTGTA CAACTCAACAAGCCAGTCGTCATTTCTGGTGACGTGGAGGGCGGTTCTTG GTCGTGTGACCCGGAGAAAAAGAGGGAACAGCGGCCGTCGGATGCGGGTC GCGAGGGTACATCAGAGTCGACGTCGCGCGGACCGGCAGAGATGGGACTC GTGGCAACGACAGACCCTAGAGCGGCGGAGGAGGGGACCTTTGTGGTGGC GGGCTCAAACGCAGGGCGAGCGTTGAATCCGTTGGTGTCAGCTGCGGAAG GGGAAAAGGATGAGGGAGGCTACCTTCCCTTGATTCTGGCCAGACTGAAA CAACTGGAGGAAGGGTGGACACAGAGGGCAAATGCCTACGAGGTAACTGG CGACGATGCTCTCACTCTATTTTCTTTTCATTGGTTGGGGGCGGAGGGTG AGGGGCGGGGTGGATGCTAAACGACCAAGGCTACTCAACACGCTGCGCGT AGGGGAGAGGACTTGATGAGTCTCGTTTTTTTTAGCGTTCGCCGTACCCG TGTTCCGCTTTCTGTTGACGTGCTCAGTCCTGCAGAAAATAGCCAAGAGA GGCTCGTCGTACTTGTATCCCATCTGCTAACTGCACCGGTGGAACCTCCA ATCTCCCTTCAACACCTGACTTGTTTCTTTGATATCGCCCTTTTTTCTGC CCAGAAACTCCTACAGTTGAAAGACCTCCGCATTCAGTCGCTCGAGTCCG CATGCCGCCACGGATATCTGGCGGGTCAGCACGGCAGCCGTAGGAATTCT ATGCCCGCCCTCAAGACTTCCAACAAAGACGCAGCGACAGGCACCCCTGC ACCTTTTGCCAGCGTCACCAGTGCTCTCTCGAAGCGAGCGACGGGCGGAA TACGGGCGAGGCGTACCCCTATGCGCGGCGTGGCTGGGAACGGTAAGAGC GCCGGCGCCAGAGGTAATCACGCCGCGTCGAAGACACCCCCAGGAGAATC ATCGAAGCTCTCTTCGGTCATGACGCCGCCGCCCCCTCCGTCGTAACCCA TCTGGCTGACGGGACGCGTACATGCCCTGGACAGCGACGGCGGCGGCTGT TGAAAGGATTGCAGGGGAAAAGCATGTTTTGGCGGCCTTGTCAGTCTCAT CCTTCCCGCGTCTGGTCAGTCTGACAGGCGTGTTCGTGAG
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig1042:136746..144135-

>mRNA_A-nodosum_M_contig1042.14.1 ID=mRNA_A-nodosum_M_contig1042.14.1|Name=mRNA_A-nodosum_M_contig1042.14.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=3339bp|location=Sequence derived from alignment at A-nodosum_M_contig1042:136746..144135- (Ascophyllum nodosum dioecious)
ATGGTCAGAGGCAAGTCTCCGCTTTCAAAGGGATCAGAAGCACTAGCTTA
TTCTTACGGCAAGGGTGATAGGGCGAATCGCGCCGATCGCGGCCACCACC
ACGCCCATAAATTGAGTCGAGGGTCAAGCACTTTGGGGACAATGGGGAAA
GCGTCTGTTTCAGAGAAACTTCCATCTGTGATTTCGGGGACCGACTTGGA
AAACAGCGAACCAGACGCCGCGGGAGCTGCCAATGCCCAAAGTACCATCG
ACTCGCACAGGGCGGAGCTCTCTACAAGGAAAGGTGGATTAGAGAGATCA
GGAGCGGAAGGAATGCTAAGTGCCCAATGCGGAGCGGCTATTTCTAGGCG
ATCCTCGTACTCCTCCTCTGAGGCACCTTTGGCTGCCAGACCGGGTGATA
CTGAAGCCGACATTGACGGCGATGCCGGTATTGCCCGCGACGGCGATCGG
GCCAAATCGCTGTCGTCTCCCAACACATTGCGTGCATCGAGCATGTTTGT
CAGCAGCAACAACAGCAGTTGTGGTGACTGCGGTAGCAACGGCGTCAGAG
GCAGCGATTGCCTGACTAATGGCGAACATGGCCCGGCGGGTATCGAAATC
CTGCCGACTCCGCCGACACCCAGCCCGGTGGCAATGACTGCAACAGTCGC
TATCCCAAGTCAAGATCAGGCAGGAGGAGTTCTCTCATCCAATACCACCG
ACATCGATGCAAACGGTACGGTGAAGAGCGAAGTCGCTCAGACTCTCCCG
GGCGATTCCGACGGTCGTGTGAGTGTCTTATGCCGCTTCAAGTGCTTCCA
GGAGGAGGAGTCGCTCGACTCCTCCCGCGACTGGCTGCGGTTCAGCGAAA
GCGCCAGCGGGGAGCAGGCCGTCAGCGAGCAGGACACTGTGAATCTACGG
GTAGGGTGCTCTTGGAGCGAGAGAGCCTTTGACAAAGTGTTCAGACCCGG
CGATGGTCAAGAGCAGGTCTTTGCACAGGTGGAACGTGTAGCTCACGGGG
TGGCCGAAGGCTTCAACGGAACTGTCTTCGCCTACGGCCAAACGGGGTCG
GGAAAAACCTACACCATGATGGGACGAGGTTTGACGGACACGCGGTCCTT
CACCGATTACCCTGTTCGATCGAGTGCTGACGAGCGCTTGGAACCCAAAG
ATCATCTCGATACCCTGCCAGAACAACAGCAGTCGCCTTCGCCGCCGCAC
ACGGTGAAACCAGACAAACCGACGGAGCACGCGGTTGCACAAGCACCCGT
TACCGATGGCGGCAAAAAAGGTGCTTCTGCGTCTGGATTGGGGACGGAGG
CGGGGGTGATACCGAGGGCCGTCGCTAGGGTTTTGAGAGACGCACACGCG
CGCAGGGAGCAAGGGTGGGAGTTTTTCTTGTCGGCGACGTTCGTGGAAAT
CTACAACGAGAAGATACGCGACCTTTTGGAACCCTCCAACGATAACCTCA
AGGTTACAGAGAACCCCGGACGCGGCATGGAGGCTGCAGGCGCCACGGAA
GTGCAGATTTCAACGCTCGAGGAAGCCTTAGAGGTGCTGCGAGCGGGGGC
AAGATACCGGATGACGGCCCCAACGCTGATGCATGAAGCATCCAGCAGGA
GCCACAGTATTTTCATGCTGAGGCTAGAACAGCATGACGCCGTGCGCAAC
TGTAAGGTTTCCGCCCGTCTCACCCTCGTGGATCTGGCTGGTTCGGAAAG
GGCGGGAAAGGCGGGGTTGGAAGGACGGCATCTTGAAGAGGCGAGCAGCA
TCAACGTCAGCCTGCACACCCTGGGCAGGGTCATCCGGAAGCTGAGCGAG
AACGCGCCGCACGTGCCTTTCCGCGACAGCAAGCTCACGCGCCTGTTGCA
GGAGTCTCTCGGAGGCAATAGCCGCACGGTGCTGGTTGTTTGCTGCAGCC
CCGAGCAAGTGCACTTTCGGGAGACCCTCTCCACTCTAAAATTTGGTGAA
TGTGCCAAGCGGGTGACCACATTCGTCTCTGCGAACGTCGTCGCCGCTCC
GGACGAAGTCGCCGCCCAGCTGTCAGAGCTCCGGGGGGAAATGGTCCGAC
TCAAGCGACAGCTCCACGACCTTCGGCTGCGGGAGGCGAGGAAGGAAGCC
GCTCTGTCACGCGGAAGGAATAAATCCCGGAGGACCTATTCGATTGCGGC
AGTGCGGTCCTTACGGGGAGGGGGAAGGGTCGGCGAAATTACTTACAACA
GCGGTGAGGAGTCCTCGTTCGGGGCCTTGTCTCCATCCCCTGCCCCAGGC
CGGAGGGAGACTGCCCTCGACTCGACTATGTCGTTCGACACGGCTCGACC
ATCGTTGTCCAAACGGGGCTTGAGGTTGGCGCAGCAATCTTACTCAAAAA
CAAGCCCGAGACACCGGCCTTGGTGGTCAGAAGATGAATGCGACCTTGCT
GCTGCTACGGCCTATGCGTCGGCGGGGGCAGGGGTTAGGACGGTATGGGC
GAGGGAGCTCGGCGTGCTCCGCGGTGGGTCGGCGGTGAGCCTTATGCCTC
ATGCAAGCGGGAGCGCTGGAATGCTTGGGCGGTTAGCACGCCGGAAGGAG
ATCACCCCGCGGAACTTGGTTCCGGAGTTGGAGCACGAGGAAGGACACGA
GAAGCCTCCCGCCATGTCTCCGAAGCGCTCGAGTGGTGGAAACCCTCAGG
TTGTACAACTCAACAAGCCAGTCGTCATTTCTGGTGACGTGGAGGGCGGT
TCTTGGTCGTGTGACCCGGAGAAAAAGAGGGAACAGCGGCCGTCGGATGC
GGGTCGCGAGGGTACATCAGAGTCGACGTCGCGCGGACCGGCAGAGATGG
GACTCGTGGCAACGACAGACCCTAGAGCGGCGGAGGAGGGGACCTTTGTG
GTGGCGGGCTCAAACGCAGGGCGAGCGTTGAATCCGTTGGTGTCAGCTGC
GGAAGGGGAAAAGGATGAGGGAGGCTACCTTCCCTTGATTCTGGCCAGAC
TGAAACAACTGGAGGAAGGGTGGACACAGAGGGCAAATGCCTACGAGAAA
CTCCTACAGTTGAAAGACCTCCGCATTCAGTCGCTCGAGTCCGCATGCCG
CCACGGATATCTGGCGGGTCAGCACGGCAGCCGTAGGAATTCTATGCCCG
CCCTCAAGACTTCCAACAAAGACGCAGCGACAGGCACCCCTGCACCTTTT
GCCAGCGTCACCAGTGCTCTCTCGAAGCGAGCGACGGGCGGAATACGGGC
GAGGCGTACCCCTATGCGCGGCGTGGCTGGGAACGGTAAGAGCGCCGGCG
CCAGAGGTAATCACGCCGCGTCGAAGACACCCCCAGGAGAATCATCGAAG
CTCTCTTCGGTCATGACGCCGCCGCCCCCTCCGTCGTAA
back to top