|
|
Homology
BLAST of mRNA_A-nodosum_M_contig104.21.1 vs. uniprot
Match: D7G5B5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5B5_ECTSI) HSP 1 Score: 815 bits (2105), Expect = 9.950e-266 Identity = 601/1429 (42.06%), Postives = 787/1429 (55.07%), Query Frame = 1
Query: 1 ISTSLPMDTGAPNEDNQALHGSCAARVLILIDTADFAS----KNGAGGSARDAAICV-DSVRLSVLRVLLQLCRSCPQDSWLEWATRFFDSRHSGVGKTPSELRARLRSRLSARPNRGFTRVTQASFQAFGEACLAVSCGVQGDPLARDLETALKRWIHRRKGRGSTRAADCEVKPHSGDQPAPEERSGGPRSEASGDEG-----PRRMYAGHDMSSHEVVVRSLLEVLQEFGEAGQRDHTGASSASSITLPLPGVAHGLE--ASRPQQLLLLHGGCPSTEDGVESFVLRGNFTPEAEAFEH-KSPEERAEALMKVLNAQLGKAIVSIGARGVSFIWQDGFAKSDAASFLRGLPTSIQPKGGCLRRCLLAAGGRGVIGSGRVTGSSVLLPPSAALGRHFTSGCGDEHDPIGLSEVNTIEEIEEGRGGTTVEVALNPKGIVDVHVVSIPL--FARRCYSRHSSSKFVETVPSCATKTAPQGTPRS-TPWRLMGTVSVSQVWPGSLVHQGWGAAAVMRGQDGPGCERWREFLCELRARDLAAVTTLPLELFRRTSWTHGSHGDDNEDIEEAPTVALIVPVTEECALGWSME--VPEVDAEPETEAISLCVDTA*NAYLESQEMRAADSVGDVAAKAGMVLERRENEVGNAIQEALLERKRRRQRIKKGDLEAGARSLENLGSSASGA-AYRGAWSGGTEGSL--RESVSRCSAGEGTSCDKVAD-SIRQWRLEAFSETSRVSGSPRGCRLFASDTEMTEDDERASRTESTSG-PRRALEQVLEDVSSRSSLLVPDADYSSTLWSREGSGCGAG----ATVQRQR--VERAIDTRSRVSEDSTKTGETSEPLSLAAFVGGGARELPLSFMSEPALACLPGPPLAADVLSLGKTCARTNENAADSTVVAIRDAFGQSSLFPEAPHPSRVSTSMTPQGLGARQKFIDVIRSWERMERIAEAERHQPVEPPFPAKISTPAIPVNGNNQSRHTGEAVP-LDCAVPEAFAGEGTRPPGDERFYNPGDQNVEVAGGFEHRVSSGVCGLLKQYREVVEGGQRSPVDFVLHAVPEAVRDLTDYGRHSSATDDGQADRHARASQVLAAVVSGLSCTPRELSLKHVAKKGSRPATEEPPIKTSGAVGTNGTVAKPALQKIRDYQLQALLLCQFHTLAMDLPDTPESIAVFTSLEASGRDKMMDDAGAGGDDSKSGKVXXXXXXXXXXXXKQDQTGAPVRPSDPLPDHRRARLVDLLQPISTLLESRTIVGARFASDEGAAEAVAVG-GGTNGSRSRAYDGTLADFMGLALVKNFGPQLPRTLLALYEDFEYHPPDALAAMVAGACQGEADAVDAVESRVGVAASGADGLEKIQHNEAGGDFSEPGGFG--------------PRVSTEAMATAGILLSDRTLMSHNHFKNSGVLNGFPKVRV 4152
+S + P+ + + L SC ARVL+LID A + + GA G++R AA V D ++LSVLRVL QLC SC +SW+EWA RFFDSR GVGKTP+EL+ARLRSR +A+ RGF RVTQ SF+AFG+ACLAV+CG QGDPLARD E AL+RW RG + + +PH + A +R+ +A+GDE +RMY GHDMSSHEVVVRSLLEVLQEF +A + D T A P +A + +R QLL+LH P ++ + FVL GNFT EA + + P+++A AL +LN LGKAI+ + GVSF+WQDG + G + + + +RRCL AAG G++ G+V G + LLPPSAALG+ D +E+ +++E V VALN +G+VD+H+V+ + FA C S + A + GT + TPWRLMGT+ V +VWP SL+ QGWG V++ + G G + WR FL +L A +LA V LP LF + + + EA TVAL+VPV+ ECA+ +S P V E ++ +D + +E A D +A L R EVG A+QEA L RKRRRQ K GAR + N GSS +G G SL R+S S C EG S D A +RQWRLE S TS S SPRG RLFAS EDDE T S+SG P+RAL Q LED SSRSSLL PDAD SST S++GSG G ATV R R E ED T ++ + G A ELPLS +SEPALA +P L A++ +L K CAR+N A + + +A + S + +PQ +GARQ+F++ +R+ ER ++A++ A+ + + V + +VP + +V A G + +P D + FE + GV GL QYREVVEGGQRSPVDFV+ VPEA+RD+ D G+ +T D+H RA+QVLAA+VSGL+ TP EL H ++ + + E G + AKPA+QKIRDYQLQALLLCQ ++LAMDLP+TP+S+ F++L + DD G + K XXXXXXXXX + P RPSDPLPD RR RLVD LQPIST+L++ T+ G V G G T G SRAYDGTLADFMGLALV++F +LPRTL AL++DFE HPPDAL ++ GA + S + + + A+G E Q + G D G P +TAGILLSDRT MSHNHFK SGVLNGF +V++
Sbjct: 1 MSATQPLAEDERSRPEEPLVASCTARVLLLIDIAQLPAAAEYETGANGASRIAAAAVVDGLQLSVLRVLSQLCLSCSSNSWVEWAPRFFDSRKCGVGKTPAELKARLRSRQAAQSVRGFRRVTQGSFRAFGDACLAVACGTQGDPLARDREIALRRWA-----RGQKKHSPTWNQPHRSEPVAAVKRTAATAGDAAGDEDLKEDISKRMYDGHDMSSHEVVVRSLLEVLQEFDDASEGDRTAA----------PCIARATDDRVNRMHQLLVLHSAFPHADNDAQQFVLGGNFTSEATTINNVELPDDKASALDNLLNGHLGKAIIRARSLGVSFLWQDGAPSNAVGGGDNGRGGASRDRS-IVRRCLSAAGSSGILHWGQVVGCTGLLPPSAALGQQLAPQSARYRD----AEIRKGGDVQERADNAVVAVALNQRGVVDLHLVASKVSGFADPCDLSMLSGGGGGA--NAALPPSVDGTASNVTPWRLMGTIPVDEVWPSSLLGQGWGTTRVLKVEGGRGAQLWRCFLRDLVAGELAGVIALPRRLFVCDAQPNSGSLGREGCLPEALTVALLVPVSGECAVCFSARGVEPTVPGGEEADSGPRALDGRGSTGFTHEESPLAAHACDGRLRAESALLGRGKEVGLAMQEASLARKRRRQA--KSLPGKGARGMNNSGSSLAGVDXXXXXXXXGRSASLSQRDSGSLCFTAEGASGDGAAACDVRQWRLEMASVTSHGSASPRGLRLFASTPGGAEDDEXXXXTGSSSGGPKRALCQALEDASSRSSLLGPDADSSSTPESKDGSGWSTGTAADATVSRHRGQSESVFPPVGNAGEDETGLLDSDD---------GTASELPLSLVSEPALASIPRRVLPAELAALAKRCARSNACLAPAGEAGMANASSSGGACVRTDLGTLKSRNPSPQQVGARQRFVEAVRALERSRQVADSSTAVSAVAACAAEEAAVGLDVEAKDPLDQ--RSVPGVQDSVRHATQLGGQSGSVEGSRVDPPDG---ASCPFEGSIRKGVAGLQLQYREVVEGGQRSPVDFVVRTVPEAIRDIADCGKDVISTGHSTDDQHTRAAQVLAAIVSGLTSTPSELRANHRGRRSAGASVE--------GGGASAAAAKPAVQKIRDYQLQALLLCQVNSLAMDLPETPDSLVAFSALASGEMGDPTDDKG------RKSKXXXXXXXXXX----KGGPSIPARPSDPLPDCRRMRLVDYLQPISTMLDACTVTKPXXXXXXGGRAKVDGGVGKTKGFESRAYDGTLADFMGLALVEHFAARLPRTLGALFDDFECHPPDALTTVLTGAPPSD--------SCLDTSGAIAEGGEVEQASSKGTDDVVGGXXXXXXXXXXXXXXXXPPSSWRGISSTAGILLSDRTAMSHNHFKMSGVLNGFREVKL 1365
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 4179 |
| Hectar predicted targeting category | other localisation |
| Exons | 9 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-14_006910.1 |
| Cds size | 2373 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866409.2169874-CDS-A-nodosum_M_contig104:298643..298807 | 1680866409.2169874-CDS-A-nodosum_M_contig104:298643..298807 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig104 298644..298807 - |
| 1680866409.2289963-CDS-A-nodosum_M_contig104:299084..299730 | 1680866409.2289963-CDS-A-nodosum_M_contig104:299084..299730 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig104 299085..299730 - |
| 1680866409.2391977-CDS-A-nodosum_M_contig104:301407..301476 | 1680866409.2391977-CDS-A-nodosum_M_contig104:301407..301476 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig104 301408..301476 - |
| 1680866409.2482195-CDS-A-nodosum_M_contig104:301530..301728 | 1680866409.2482195-CDS-A-nodosum_M_contig104:301530..301728 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig104 301531..301728 - |
| 1680866409.2652347-CDS-A-nodosum_M_contig104:302209..303505 | 1680866409.2652347-CDS-A-nodosum_M_contig104:302209..303505 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig104 302210..303505 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866409.2742982-UTR-A-nodosum_M_contig104:303505..303531 | 1680866409.2742982-UTR-A-nodosum_M_contig104:303505..303531 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig104 303506..303531 - |
| 1680866409.282026-UTR-A-nodosum_M_contig104:303627..304534 | 1680866409.282026-UTR-A-nodosum_M_contig104:303627..304534 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig104 303628..304534 - |
| 1680866409.289872-UTR-A-nodosum_M_contig104:305713..305893 | 1680866409.289872-UTR-A-nodosum_M_contig104:305713..305893 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig104 305714..305893 - |
| 1680866409.3013847-UTR-A-nodosum_M_contig104:306232..306437 | 1680866409.3013847-UTR-A-nodosum_M_contig104:306232..306437 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig104 306233..306437 - |
| 1680866409.309092-UTR-A-nodosum_M_contig104:308525..309013 | 1680866409.309092-UTR-A-nodosum_M_contig104:308525..309013 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig104 308526..309013 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig104.21.1 >prot_A-nodosum_M_contig104.21.1 ID=prot_A-nodosum_M_contig104.21.1|Name=mRNA_A-nodosum_M_contig104.21.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=791bp
MRAADSVGDVAAKAGMVLERRENEVGNAIQEALLERKRRRQRIKKGDLEA
GARSLENLGSSASGAAYRGAWSGGTEGSLRESVSRCSAGEGTSCDKVADS
IRQWRLEAFSETSRVSGSPRGCRLFASDTEMTEDDERASRTESTSGPRRA
LEQVLEDVSSRSSLLVPDADYSSTLWSREGSGCGAGATVQRQRVERAIDT
RSRVSEDSTKTGETSEPLSLAAFVGGGARELPLSFMSEPALACLPGPPLA
ADVLSLGKTCARTNENAADSTVVAIRDAFGQSSLFPEAPHPSRVSTSMTP
QGLGARQKFIDVIRSWERMERIAEAERHQPVEPPFPAKISTPAIPVNGNN
QSRHTGEAVPLDCAVPEAFAGEGTRPPGDERFYNPGDQNVEVAGGFEHRV
SSGVCGLLKQYREVVEGGQRSPVDFVLHAVPEAVRDLTDYGRHSSATDDG
QADRHARASQVLAAVVSGLSCTPRELSLKHVAKKGSRPATEEPPIKTSGA
VGTNGTVAKPALQKIRDYQLQALLLCQFHTLAMDLPDTPESIAVFTSLEA
SGRDKMMDDAGAGGDDSKSGKVKGKGKKRRRKSKKQDQTGAPVRPSDPLP
DHRRARLVDLLQPISTLLESRTIVGARFASDEGAAEAVAVGGGTNGSRSR
AYDGTLADFMGLALVKNFGPQLPRTLLALYEDFEYHPPDALAAMVAGACQ
GEADAVDAVESRVGVAASGADGLEKIQHNEAGGDFSEPGGFGPRVSTEAM
ATAGILLSDRTLMSHNHFKNSGVLNGFPKVRVLTRGYVAI* back to topmRNA from alignment at A-nodosum_M_contig104:298644..309013- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig104.21.1 ID=mRNA_A-nodosum_M_contig104.21.1|Name=mRNA_A-nodosum_M_contig104.21.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=10370bp|location=Sequence derived from alignment at A-nodosum_M_contig104:298644..309013- (Ascophyllum nodosum dioecious)
ATCTCCACCTCGCTGCCCATGGATACGGGCGCACCCAATGAAGACAATCA
AGCGCTGCACGGATCATGCGCAGCGCGAGTTTTGATTCTGATCGACACTG
CTGACTTTGCATCGAAGAATGGCGCCGGCGGCTCGGCTCGTGATGCTGCC
ATCTGTGTCGACAGTGTTCGCCTGAGCGTGCTGAGAGTTCTACTTCAGCT
GTGCCGCTCATGCCCTCAGGACTCGTGGCTGGAGTGGGCCACGCGCTTCT
TCGATTCTAGACACAGTGGAGTAGGGAAAACACCATCAGAGCTTAGGGCA
AGGTTGAGATCGAGGCTGTCGGCCAGGCCAAATCGAGGGTTCACCCGTGT
TACGCAAGCGTCGTTCCAAGCGTTCGGGGAAGCTTGTTTGGCCGTTTCTT
GCGGAGTTCAGGGAGACCCCCTTGCGCGTGATCTGGAGACGGCGTTGAAG
CGTTGGATCCACAGGAGGAAGGGACGAGGTTCAACCCGGTAAGGTCCGAG
TTTTGTGTGGAATTCCTCTAGCTTATTGCCAGGACTCGCTCCCGCGTGCC
GTTGGTGATACTTACGCCGAAAAGAGTTTTCCAGTCCCTCTTGGCATCAG
TACCTTCCCGGGTACTCTGGTTCTGCCCTCTTTAACCCTTCTGGGCCTAC
ACGTGTGTTTACTGATCATTTCACTGATCATTTTTTTTAATTTTTTTTTG
TTTAGCCCGGTCTAGTCGTGTAGGGGATTAAAAAAAAAAAACGAACTCCA
CATGCAAGGAGTTGCACTGTACCACAGATCAACGCTGTGCCTGCAAAGGG
ACAACAAAAGACACTCAAATCAAAAATATATAAAAAAGGGAAGTCGTTTC
ATTAGCACGTCCATTGTCCAGGCTGGCACCCCACACCCATACTTGGGGCA
AGACCTTTGAACCCATACGCATGCTCAAAAGTTGCTGCCTCGATACCATG
AAAAACAACTCCTGTACAATATCAGGAGCAACGAACGAATCACCACGTCC
TCCGAACCTCATCGTACTGTACACACGAATTACAGCAACCGCGCCGTTCT
ACAGCACACAAGCAATGGTGGAGCCCACATCTGTGAGCCAGAACAACCGT
AAAAGCTATACATCCTCTCTTGCCACTATATACAATTGCAATGTACGTGG
AAAATGATGCATACTACTCTTTAAGGGAGAATGCCTGGACCACGGAGGCC
AATCCATGTTCGTTTGTGTATAAAGAAAAACCAGAACGCGCCTATTATAC
CTTCTGAGCATCCTCCGGTCAGGAGAAAAAATATAACGTTTAGGTGGGAT
CAAAGGCTGCAAATACAAAAATAAAAACTAGAACCGCGCCTATACCTTCT
GAGCATCTCCCAGTCAGGGGGAAAAAAACGTCAAAACGTTTAGGTGGGAA
CGTAGGCTGTTGTTGTGCTATTGTAAAATAAGGAGCGCTAGTGAGTCCGA
AGGGATCACATTGGACGGGGCCAGAGAAGTACAGAAGTACAGTTTGTCAG
TCTGGCCCTTCAAAGCGCGCTCACTGATCATTTGAACCCTCTGTACTGAT
CATTTGAAATATGTTGAAAATAGAGTTGTGACATGCATAAAACATCTAGG
GCTGGACGCCTAACAACCTCTGTCTGCGACAGCACTACCACTCCACAACC
ACTCCACAACCCTTCATGTACCCTGAGAGACGCCTCCAGCCTGTTGCGGG
CCGCCGTCACGCCCCTTGGGCCGAGATCGTAAAGCTACCAACTATATATA
TGTACTTCTTGTTTTTTTGTGCACTTCTCTCCCTCTGCTCTGCATGTCTC
TCAAACGCTATTTTTTTTCTTGGAATTTTATTTTTGTGAAACGGAGCGAG
TTTTTATGACAGTCCGGTCTGTCGGAAGGCGAGTAGTCCAGGGCCAGTTA
ACTACTGTCCTACAAGCACTCTATATTACAGTTCAAGTACTTCGGTATCT
GAAGTTCCACCTCTTGTGTAGGTGTAAAGAGTGTTTCGTTTCACGCTCGC
CTTACCATCTCGTACTGAGCAGCATGGCACGGGCTGGCAGGTGGTCTGCG
TCGAGCTATCTTGAGTTAATATACCTGTTAGTTCGAACGTACGTCCGTAA
AAGCAGTACTCGTACGGAGTGCGTTATACTTGTACTCGTACTTGTAGTAC
CGGTACAGTACAGTACAGTACAGTACAGACATGCCGAAAGTTTCCAACGG
CCATGTTTTACTCCACTCTCTACCAATAAATACGAGATACAGCACAGATA
TACGCATTGTACGAGTGCAACAACGAAATAGCATGAAGCCTCTGCGTGTA
ACGCTACAGGCAGTACTGTAAATTCCGGTACACAAGAGTATTACAGTAGT
ACAACAATGTTGGAAGACCCAGCTTGGGCGATCTAAGCAGGCAGATACCA
CAATATAATACTAGGTACTAATAACACAGCAGTTGTCGAAGACTTTTTGC
CGACCAATGTCCTGGCTGGCTTCACTTGGAAGAAACGAAATGACAGCCCC
AAAATACATGGCCTCTGCTCTTGTCTTGTCTTGTCTTGTCTATCTCTGAT
GCTGCGGATAGCAGTATTAGTCGGAGCGCTGCAGATTGCGAGGTCAAGCC
TCACAGCGGCGACCAACCTGCCCCCGAAGAACGGTCTGGTGGGCCAAGGT
CAGAAGCGTCTGGTGACGAGGGCCCTAGACGAATGTACGCTGGCCACGAC
ATGTCTAGCCACGAAGTTGTCGTCCGGTCTCTGCTGGAGGTGTTGCAGGA
GTTTGGCGAAGCTGGACAGCGAGACCATACGGTGAGACGGGATTTTGCTT
TGAACTTTACCGCATCACCAGGGGGAGTATTTACTGTATATTAACTCCTG
TGTAGCACCTGGTCCTCATTAAACATACTGTACCTTACTATTAATAGGAT
TGTACTACTCTCTGGCGGTGTAGAGCTACAGATATCCAGCATTGCAAAGG
GGGCATGTCGGCCAATCACGTTTGGAGTGCCATCTCCATGCCGTCTGGAA
AGACTACGTTTGCTTAGCTGCTTGGTTCGCACCATTAGCCCGATCTACTA
ACAATTTATAGTAACATATTACTGGCAGTTTCGATACAGGATCACAACCT
CTCTTCCATCCTTCCTTCAGGGTGCGTCTTCAGCGTCTTCAATAACCCTA
CCCCTACCCGGAGTTGCGCACGGCCTTGAAGCTTCGCGGCCCCAGCAGTT
ACTCCTGCTGCACGGCGGCTGTCCAAGTACCGAAGACGGTGTGGAGAGCT
TTGTGTTACGAGGAAACTTCACCCCTGAAGCAGAGGCGTTTGAACACAAG
GTACAGTAAAGTACACCAAGGAGTACTTTCAGCTATCCTGTCCTGAAACC
CGCTGCTTTAGCTCTTTAGCGGCCGTCGTGCTTTCCTCGCGACAACTTCT
TTAAACGGCACGTTTTTATTGCGAGCGTAGTGAGCTTCTAATCTGCCAGG
TGCATCAATTTGGGCTCGGGTGTATAAAAAACTGTGCACATTGACCAATC
AGAATATCATTTCGGGACTTTTTTGTATCCTCTCGGCGTAAATCAATATT
TTGTACTTCCTTCGTCTTATATTCGGTCAAGGATTTATTTATTTCAGCAC
GGCGTAGGTTCTTTTCCAGCGTCGATGTATTGCGTAGTGTATAAAAAACG
GTGCACTGTACGGTGCTGGATTTGCCCGGCGATATAAAAAACGTAGGCGA
GAACCGGGTTGAGATGGAATATCCTTAGTGAAACAGGATGCTGCGCATAA
AGGGTTCTGCAGGACATTCCCGTTGTACGCTCTCTTGAACAATTTCGAAC
ACAGGCTTTTCTGCACATAAAGTCTACTGCTGTACAAAGGTGTGCTCGTA
AGGGTACTAAATTTGCATCGGGATCAAACATCGTTGGCGAGAGCCGGGGA
GAGATGAGAAATCCGTTAGTGACATAGGATTCTACGCATAGAGGGTTCTG
CTGAACATTTCCGTTGTGCATGTGTAGATAGACCTTCACGCTCTCCTCAC
GAACAATTTCGAACCCAGGGTTCTGCGCATAGAGCCTATTAATACTGCTG
TAGAAAGGTGTGCTAGTAGGTACCTGGTACGGAATTTGCATCGCGATAAA
AAATCGTAGGCGCGAACCGGGGAGAGGTGTTAAGATTCGTTGTGACAGGA
TGCTGCGCATGAAGGGTTCTGCTGAACATTCCCTTTGTACATGTGTAGAT
AGACCTCACGCTCTGCCGATGAACAATTACCCAACAACGCTCCGCACAGA
AAATGCCTTCGAAAAAAGACGACTGCCTGCGTCAGCCTGTTTCTTTTCTT
TACAATCAGGCATGGCACTTTCCCGTACATGATTGAGAACGACGGCAGTT
CAACAAGCCAAACACCAACCACACATTACACCAACACCTGTGTTAAGCTG
ACGATAGTTACAGACCTATCCTTTAGCGAGCGTATAGCGATAGCTAACCT
ATCTTACTTTCTCTTGTGCTTTGAACCAGTCGCCAGAGGAGCGGGCGGAA
GCCTTGATGAAAGTGCTCAATGCCCAACTTGGCAAGGCTATTGTCAGCAT
TGGTGCCCGAGGAGTGTCTTTTATTTGGCAGGACGGATTCGCAAAGAGCG
ACGCGGCATCTTTTTTGAGGGGACTTCCAACATCGATTCAACCCAAGGGG
GGGTGTCTGCGTCGATGCCTGTTGGCGGCTGGTGGCCGAGGTGTCATCGG
GTCGGGGCGCGTTACGGGGAGCTCGGTTCTGTTGCCCCCTTCAGCCGCTC
TGGGGAGGCATTTTACTTCAGGTTGTGGAGATGAACATGACCCTATCGGG
TTAAGCGAAGTGAACACGATAGAAGAGATAGAAGAGGGAAGGGGCGGAAC
GACGGTTGAAGTTGCCCTGAACCCAAAAGGAATCGTGGACGTCCACGTCG
TGTCCATCCCCCTTTTTGCTCGGCGATGCTACTCAAGACACTCGAGCAGC
AAGTTCGTGGAAACAGTACCGTCTTGTGCGACCAAGACCGCTCCACAGGG
AACTCCACGGAGTACGCCTTGGCGTCTAATGGGAACAGTTTCAGTCAGCC
AAGTCTGGCCGGGTAGTCTAGTGCATCAGGGTTGGGGCGCAGCGGCTGTA
ATGCGGGGACAAGATGGTCCCGGCTGTGAGCGGTGGCGCGAATTTCTGTG
CGAGCTGCGGGCGAGAGATCTGGCGGCGGTTACCACCTTGCCGCTCGAGC
TGTTTAGACGTACCTCTTGGACACACGGTAGTCACGGCGACGACAATGAG
GACATTGAGGAGGCACCCACAGTGGCGCTTATCGTGCCCGTTACCGAAGA
GTGCGCCTTGGGGTGGAGCATGGAAGTGCCTGAGGTTGACGCTGAGCCTG
AGACTGAGGCCATCTCGCTATGCGTGGACACTGCCTGTGCGTCGCGTTTC
AGTGCGCAATCGCAAGTTCTCGCGCTTGAGGCACTGGAATCCATGGGCGT
GATGGGCGAGCCAATCTCTAAGGAAGAGAGAGAAAATGCCTACCTTGAGT
CCCAGGAGATGCGAGCAGCAGATAGCGTCGGCGACGTCGCAGCGAAAGCG
GGAATGGTGCTCGAGAGGAGAGAGAACGAAGTTGGGAATGCAATCCAGGA
AGCCTTGCTAGAAAGGAAAAGACGCCGCCAGCGAATAAAGAAGGGGGACT
TGGAGGCGGGGGCGCGTAGTTTGGAAAACTTAGGCTCTTCTGCTTCCGGC
GCAGCCTATCGAGGGGCATGGTCGGGTGGAACTGAAGGGTCTCTGCGAGA
GTCGGTATCTCGTTGCTCCGCTGGGGAAGGCACGAGTTGCGACAAAGTAG
CGGATTCAATACGGCAGTGGCGCCTGGAGGCTTTCTCTGAAACATCCCGC
GTATCCGGGAGCCCTCGAGGCTGCCGCTTGTTTGCGAGTGACACGGAAAT
GACAGAAGACGACGAAAGGGCGTCGCGCACGGAATCCACGTCAGGACCTC
GGCGAGCTCTGGAACAGGTGCTTGAGGATGTTTCATCCCGTTCATCCCTT
CTCGTACCGGACGCGGATTATTCCTCAACCCTTTGGAGTAGGGAGGGCAG
CGGATGCGGTGCTGGAGCTACCGTGCAACGACAGCGTGTTGAACGGGCCA
TAGACACACGAAGCCGGGTTTCTGAGGATTCGACCAAGACCGGCGAAACA
AGCGAGCCTTTGAGCTTAGCGGCTTTTGTTGGAGGCGGTGCGAGAGAGCT
GCCGCTATCCTTCATGTCGGAGCCAGCTCTCGCTTGCCTGCCTGGGCCCC
CTCTTGCCGCCGATGTGTTGAGCCTGGGGAAGACCTGCGCACGCACCAAC
GAAAACGCTGCTGATTCAACAGTCGTTGCAATTCGCGATGCTTTCGGGCA
GTCCAGTTTGTTCCCAGAGGCACCCCACCCCTCTCGAGTATCGACATCGA
TGACACCTCAGGGCCTCGGGGCCAGACAAAAGTTCATCGATGTTATTCGC
TCTTGGGAGCGGATGGAACGAATTGCTGAAGCCGAACGTCATCAGCCGGT
AGAACCTCCGTTCCCCGCAAAAATCTCTACCCCTGCCATCCCCGTTAATG
GTAATAATCAAAGTCGTCATACGGGAGAGGCAGTACCCTTAGACTGTGCG
GTTCCAGAGGCTTTCGCAGGCGAAGGAACGCGTCCTCCTGGGGATGAACG
ATTTTACAATCCCGGGGACCAAAATGTCGAGGTAGCCGGAGGCTTCGAGC
ATCGCGTCAGCAGTGGCGTCTGTGGGTTGCTGAAGCAGTACCGGGAGGTC
GTGGAGGGTGGGCAGAGGTCACCCGTAGATTTCGTGCTCCATGCTGTGCC
GGAGGTGCGCCCGCCGATCCTCTTGTCTTATTTATATTAATAGTTGCGCC
GCGCTGTTGAAATGAGTGTAACGTAGAGGGATAAAACGCGTCGCTGAAGC
CAGTTTTTGAGGAGTCAGAGGAGTCAGAGCCGTTTGGCGGGTGGATTCTA
GGAGATAGATAGATAGATAGATAGATGATAGCCCAATGAAAACAGAGGTG
TTGTGGAAGGTCTAGCGGTAGTTTCGTCTTGGTAATGTTCTCGCCCTAAC
GTGTGCTCGCAAGCAATCGAGATTAGGCCTCAAGCGATGAGAGTCGTAGC
CATCCTGTCCCCTCAGACCACTAAACCATGCGTTATCTCTCATCGCTACC
GTTATCTTTAATCGCTGTCGTGATATTTCATCGCTGTCGTGATCTCTCAT
CGCTCTCGTGTGATGTGTGATTTCTCATGCCTGACGTGATCCTTCATCCC
TATCCACTCTCGTGATCTCTCATGCCGACGACCAGGCTGTTCGCGACCTG
ACGGACTATGGCCGGCACTCCAGCGCAACCGATGATGGTCAGGCGGATCG
CCACGCGCGAGCTTCGCAAGTCTTAGCTGCTGTTGTTAGTGGCCTCTCCT
GTACGCCCCGGGAATTGAGCTTGAAGCACGTGGCAAAGAAGGGCAGCCGG
CCAGCAACGGAAGAACCACCAATCAAAACATCGGTAGATACATCATTAGG
TACATCATTAGATACATCATCATCAGATAGGGGAAAGGGCGCGGTGGGGA
CGAACGGCACGGTCGCCAAGCCAGCCCTCCAGAAAATACGGGACTATCAG
CTCCAGGTAATGTGTTTATGTGTGTGTGTGTATTTATTAAATTGCACATA
ACCACGCAATCCGGCCCTGTCATCCTAGTCATTCTATGCCACTCGCTTTG
ATCCTCCCAAGGGGGGATCAAGGATACTTACTACGAAAACCTCTCATCAG
ACGCGCCAAAGGGGAAACACTCTATCTACTTGTACAGTTCCTACTTAAGC
CCTGAGTACCTTGTGCTCCCACCCCTGCTTCCTTGCCATTCTTAAGATTA
TCTGGGTTGGCGGCTACTGAACCAACCCTTTATTGTCTACGTCTTTTACT
CTTTCCACCCACGTCTCCCCGTTTCCCACATCGCGTCTAGAACTCTCATG
TATGTGTATGTATGTATGGTCATCACATATAGCAGAGTATGGATCAACCG
GGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACAGGGAAAATAATAT
TTCCCTGTCCCCGTGCGTGCCTGAGAATTTGGTCTCGCGAGACAGGTTCA
GCCGTCCCGTCCCGCGTCAGCCTGCTCATTTCCATACTCAGGCTGAATCT
GGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGGTGGTGTCCATTTAT
GAAACCGCCATACGCCATCGGGTCAGTCCCGAGTTTATCGGGTCACGCAA
ATGCGTACCGATGGCGTTCACTGCCGAGAGTCCGCCGGCACAGGGCCAGT
AAACCTCAAGGTAGTTCCGAACGGGTGCTGCCTTGGTAGGTCACCATGGA
CCAATTAATATTCGCCTCTCTTTCCCACACCCACTATTGGTATGAAGGGG
GCATGCTGAAAGTACCGGCGGTATGTGTGTGTGTGTGTGTGTGTATTTAT
TAAATTGCACATAACCGCGCAATCCGGCCCTGTCATCCTAGTCATTCTAT
GCCACTCGCATTGATCCTCCCAAGGGGGGATCAATGTGTGTGTGTGTGTG
TTCTTCACATTAACCGATCGGGCCTCAACCATACCCAGTAATATACGCGG
TTGCCAATCCGGTACTACTACGTGGCCTGCTGGACAGGAAAAGATCAGAG
GAACATCTTTAAAGCTCCAACAATAGCATAAAAACAACAACAAAAAACAA
GGCAAAAACGACAGAAAAATAAATGAATAAAAATAACACAAAAACACACA
AAAAAATGCCAGAAAGGATCGGTAGGATGCAGAGCCAGACTCGCAGGGAA
GCCATAAAATACAATACAGTACAGTATAGCATACATTAGAGCACACAGTA
TAGCATATTATATACATTAGAGTACACTAACACGAAGAAAGGGAGGTACT
CGCTATTATACTATTAATATTATTAATAGTTTGATACATCGCCAGCCGCC
AGCCATAGTGGTACGAAGTGTTTTGAAGCAGGCTGTTTGTGGAGAGGAAA
GAGCGTGTAATGTAATGCCACTTGTATGGTGTTATTAGGAGAATTCACCA
CCCTTTGCCCTGCGAGAGGACCGCTATGATATGCTATTCTATGCTATGCT
ATGCTATTCTATGCTATGCTATGCTATTCTATGCTATGCTATGCTATTCT
ATGCTATTCTATGCTATGCTATGCTATTCTATGCTATGCTATGCTATTCT
ATGCTATGCTATGCTATGTTGACCCTCCGCTACATACTGTAACCTATTAA
TAGAGGTATCAATCGATCTCACTCGATGCGCAGGCGCTGCTCCTCTGTCA
GTTCCACACTCTGGCCATGGACCTGCCAGACACGCCCGAGAGTATTGCTG
TCTTCACCTCACTCGAGGCAAGCGGGCGAGACAAAATGATGGACGATGCT
GGAGCTGGAGGTGATGACAGCAAGAGCGGCAAAGTCAAAGGCAAGGGGAA
AAAACGACGCCGCAAAAGCAAGAAACAAGACCAAACCGGCGCGCCCGTAA
GACCGTCCGATCCGCTCCCAGACCACCGTCGAGCCCGACTCGTGGACCTT
TTGCAGCCGATTTCAACGCTTCTTGAATCCCGCACGATCGTTGGGGCACG
ATTTGCGAGTGACGAGGGAGCAGCAGAGGCCGTTGCCGTCGGCGGAGGAA
CGAACGGGTCGCGTTCTCGTGCCTACGACGGCACGCTTGCGGACTTCATG
GGGCTTGCACTTGTAAAGAACTTTGGGCCGCAGTTGCCGAGGACCCTCTT
AGCCCTGTACGAAGACTTCGAGTATCACCCACCGGATGCGCTTGCCGCGA
TGGTCGCGGGGGCGTGCCAAGGAGAGGCTGATGCTGTCGACGCCGTTGAA
AGCAGGGTGGGGGTGGCAGCGAGCGGAGCCGATGGCCTAGAGAAAATCCA
ACATAACGAAGCGGGAGGCGACTTCTCTGGTACTGGTACTGGTGAGACAT
GAATTCAGGCTGCGGCGGCACAGTAGACTGGAGTGTTACTATCTCGTCCA
GCTCACGCGTGTTTTGGTGTGTTGCCTGAAATGGCGTTTTAATCAAGTCT
GGTACAAATAATGTACGTGAACAATGCACACGGGTCATTCTGCTGACGTT
CTCTGGGTTTAGTACCGTCGTATCTTGTTGCAACCTATGCATATCTTGGA
TACTGCATACTGTATCCATCCTCGTACAGGAACTATTAATACTGAGGCGG
GAACAGAGCCTGGTGGGTTCGGGCCGAGGGTATCTACTGAAGCCATGGCC
ACGGCGGGTATCCTGTTGTCAGATCGCACCCTGATGTCCCACAACCACTT
CAAGAATTCGGGCGTACTGAACGGATTCCCCAAGGTGAGAGTACTCACGC
GGGGCTACGTAGCTATTTAA back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig104:298644..309013- >mRNA_A-nodosum_M_contig104.21.1 ID=mRNA_A-nodosum_M_contig104.21.1|Name=mRNA_A-nodosum_M_contig104.21.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2373bp|location=Sequence derived from alignment at A-nodosum_M_contig104:298644..309013- (Ascophyllum nodosum dioecious)
ATGCGAGCAGCAGATAGCGTCGGCGACGTCGCAGCGAAAGCGGGAATGGT
GCTCGAGAGGAGAGAGAACGAAGTTGGGAATGCAATCCAGGAAGCCTTGC
TAGAAAGGAAAAGACGCCGCCAGCGAATAAAGAAGGGGGACTTGGAGGCG
GGGGCGCGTAGTTTGGAAAACTTAGGCTCTTCTGCTTCCGGCGCAGCCTA
TCGAGGGGCATGGTCGGGTGGAACTGAAGGGTCTCTGCGAGAGTCGGTAT
CTCGTTGCTCCGCTGGGGAAGGCACGAGTTGCGACAAAGTAGCGGATTCA
ATACGGCAGTGGCGCCTGGAGGCTTTCTCTGAAACATCCCGCGTATCCGG
GAGCCCTCGAGGCTGCCGCTTGTTTGCGAGTGACACGGAAATGACAGAAG
ACGACGAAAGGGCGTCGCGCACGGAATCCACGTCAGGACCTCGGCGAGCT
CTGGAACAGGTGCTTGAGGATGTTTCATCCCGTTCATCCCTTCTCGTACC
GGACGCGGATTATTCCTCAACCCTTTGGAGTAGGGAGGGCAGCGGATGCG
GTGCTGGAGCTACCGTGCAACGACAGCGTGTTGAACGGGCCATAGACACA
CGAAGCCGGGTTTCTGAGGATTCGACCAAGACCGGCGAAACAAGCGAGCC
TTTGAGCTTAGCGGCTTTTGTTGGAGGCGGTGCGAGAGAGCTGCCGCTAT
CCTTCATGTCGGAGCCAGCTCTCGCTTGCCTGCCTGGGCCCCCTCTTGCC
GCCGATGTGTTGAGCCTGGGGAAGACCTGCGCACGCACCAACGAAAACGC
TGCTGATTCAACAGTCGTTGCAATTCGCGATGCTTTCGGGCAGTCCAGTT
TGTTCCCAGAGGCACCCCACCCCTCTCGAGTATCGACATCGATGACACCT
CAGGGCCTCGGGGCCAGACAAAAGTTCATCGATGTTATTCGCTCTTGGGA
GCGGATGGAACGAATTGCTGAAGCCGAACGTCATCAGCCGGTAGAACCTC
CGTTCCCCGCAAAAATCTCTACCCCTGCCATCCCCGTTAATGGTAATAAT
CAAAGTCGTCATACGGGAGAGGCAGTACCCTTAGACTGTGCGGTTCCAGA
GGCTTTCGCAGGCGAAGGAACGCGTCCTCCTGGGGATGAACGATTTTACA
ATCCCGGGGACCAAAATGTCGAGGTAGCCGGAGGCTTCGAGCATCGCGTC
AGCAGTGGCGTCTGTGGGTTGCTGAAGCAGTACCGGGAGGTCGTGGAGGG
TGGGCAGAGGTCACCCGTAGATTTCGTGCTCCATGCTGTGCCGGAGGCTG
TTCGCGACCTGACGGACTATGGCCGGCACTCCAGCGCAACCGATGATGGT
CAGGCGGATCGCCACGCGCGAGCTTCGCAAGTCTTAGCTGCTGTTGTTAG
TGGCCTCTCCTGTACGCCCCGGGAATTGAGCTTGAAGCACGTGGCAAAGA
AGGGCAGCCGGCCAGCAACGGAAGAACCACCAATCAAAACATCGGGCGCG
GTGGGGACGAACGGCACGGTCGCCAAGCCAGCCCTCCAGAAAATACGGGA
CTATCAGCTCCAGGCGCTGCTCCTCTGTCAGTTCCACACTCTGGCCATGG
ACCTGCCAGACACGCCCGAGAGTATTGCTGTCTTCACCTCACTCGAGGCA
AGCGGGCGAGACAAAATGATGGACGATGCTGGAGCTGGAGGTGATGACAG
CAAGAGCGGCAAAGTCAAAGGCAAGGGGAAAAAACGACGCCGCAAAAGCA
AGAAACAAGACCAAACCGGCGCGCCCGTAAGACCGTCCGATCCGCTCCCA
GACCACCGTCGAGCCCGACTCGTGGACCTTTTGCAGCCGATTTCAACGCT
TCTTGAATCCCGCACGATCGTTGGGGCACGATTTGCGAGTGACGAGGGAG
CAGCAGAGGCCGTTGCCGTCGGCGGAGGAACGAACGGGTCGCGTTCTCGT
GCCTACGACGGCACGCTTGCGGACTTCATGGGGCTTGCACTTGTAAAGAA
CTTTGGGCCGCAGTTGCCGAGGACCCTCTTAGCCCTGTACGAAGACTTCG
AGTATCACCCACCGGATGCGCTTGCCGCGATGGTCGCGGGGGCGTGCCAA
GGAGAGGCTGATGCTGTCGACGCCGTTGAAAGCAGGGTGGGGGTGGCAGC
GAGCGGAGCCGATGGCCTAGAGAAAATCCAACATAACGAAGCGGGAGGCG
ACTTCTCTGAGCCTGGTGGGTTCGGGCCGAGGGTATCTACTGAAGCCATG
GCCACGGCGGGTATCCTGTTGTCAGATCGCACCCTGATGTCCCACAACCA
CTTCAAGAATTCGGGCGTACTGAACGGATTCCCCAAGGTGAGAGTACTCA
CGCGGGGCTACGTAGCTATTTAA back to top
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