mRNA_A-nodosum_M_contig1031.45.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1031.45.2
Unique NamemRNA_A-nodosum_M_contig1031.45.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1031.45.2 vs. uniprot
Match: A0A6H5L2F5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2F5_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 4.460e-100
Identity = 160/252 (63.49%), Postives = 186/252 (73.81%), Query Frame = 1 
Query:  289 DGAPVAASNKSGMMEADPTLVRVGVVGVSDGAEEGQ-------------VTRLWNLPNVLTVGRIALIPIFAMFFYASLPRRNVWCAAIFGGAALTDWFDGYIARTRGLETPFGAFLDPVADKLMVSTALILLCERLGPWMTICSAIILCRELAVSALREWMAQLGLRETVKVGNAGKWKTATQASALPSPSSPSSQMIAVNLLLLLEPGATVTLLDPVVFMPLAKGLLYISTVLTVTSGSSYLRAAWPTLV 1005
            DGAP+++S      E D      G  G   GAE G+              T LWN+PN+LT+ R+  IP+FA  FYASLPRRN+WC+AIF GAA TDW DGYIAR +G+ TPFG+FLDPVADKL+VSTALILL ERLGPWMT+CSAIILCRELA+SALREWMAQLGLRETVKVGNAGKWKTATQ             M+A+ +LLLLEPGA VTL++P   MP+AK LLY+STVLTVTSGS YL+AAWP L+
Sbjct:  109 DGAPLSSSPSLSAAEGD------GKGGGVQGAEAGEPALVDVAKLESAAATTLWNVPNILTMARVMAIPVFATIFYASLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSERLGPWMTVCSAIILCRELAISALREWMAQLGLRETVKVGNAGKWKTATQ-------------MMAITMLLLLEPGAAVTLVNPATAMPIAKSLLYVSTVLTVTSGSGYLKAAWPALM 341
[Close]
BLAST of mRNA_A-nodosum_M_contig1031.45.2 vs. uniprot
Match: A0A835ZDG0_9STRA (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDG0_9STRA)

HSP 1 Score: 229 bits (585), Expect = 6.050e-71
Identity = 123/217 (56.68%), Postives = 152/217 (70.05%), Query Frame = 1 
Query:  361 VVGVSDGAE-EGQVT-RLWNLPNVLTVGRIALIPIFAMFFYASLPRRNVWCAAIFGGAALTDWFDGYIARTRGLETPFGAFLDPVADKLMVSTALILLCERLGPWMTICSAIILCRELAVSALREWMAQLGLRETVKVGNAGKWKTATQASALPSPSSPSSQMIAVNLLLLLEPGATVTLLDPVVFMPLAKGLLYISTVLTVTSGSSYLRAAWPTLV 1005
            VVG    AE EG  T  LWN+PN+LT+ R+  +PI    FYA +  RN+WCAA+F GAA+TDW DG+ AR   + +PFGAFLDPVADKL+V+ A+ILL ERLG WMT+C++IILCRE+AVSALREWMAQ+G R  VKVG AGK KTA             +QM+A+  LLLL+P A   +L PV F    K L+  S VLTVTSG+ YL+AAWP L+
Sbjct:   27 VVGEGSLAEVEGVNTPTLWNVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSERLGEWMTVCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTA-------------AQMVALTTLLLLQPSAAPAILPPVAF-DAGKWLMIFSAVLTVTSGTGYLQAAWPALM 229
[Close]
BLAST of mRNA_A-nodosum_M_contig1031.45.2 vs. uniprot
Match: A0A7S2V0D2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0D2_9STRA)

HSP 1 Score: 188 bits (477), Expect = 5.710e-55
Identity = 111/205 (54.15%), Postives = 136/205 (66.34%), Query Frame = 1 
Query:  394 QVTRLWNLPNVLTVGRIALIPIFAMFFYASLPRRNVWCAAIFGGAALTDWFDGYIARTRGLETPFGAFLDPVADKLMVSTALILLCERLGPWMT-ICSAIILCRELAVSALREWMAQLGLRETVKVGNAGKWKTATQASALPSPSSPSSQMIAVNLLLLLEPGATVTLLDPVVFM-PLAKGLLYISTVLTVTSGSSYLRAAWPTL 1002
            Q+  LWN+PN+LT+ R+  IPIFA  FY  +P RN   AAIF  A+ TDW DGY+AR   + +PFGAFLDPVADKLMV++AL+LL    G W+  + +AIIL RE+ VSALREWMA  G R  V+VG AGK KTA Q             M+++ LLLL + GA   L  PV  + P A  LLY+STVLTVTSG  YL+AAWP L
Sbjct:   23 QIDNLWNIPNILTMLRVVAIPIFAFVFYLPVPWRNKATAAIFAVASATDWLDGYLARKWKITSPFGAFLDPVADKLMVASALVLLAGSEGGWVVAVPAAIILAREITVSALREWMAGRGERSKVQVGMAGKVKTACQ-------------MVSLILLLLAQKGADCPL--PVSLLHPAALALLYLSTVLTVTSGWGYLQAAWPAL 212
[Close]
BLAST of mRNA_A-nodosum_M_contig1031.45.2 vs. uniprot
Match: A0A7S2UZN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN3_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.530e-53
Identity = 111/205 (54.15%), Postives = 136/205 (66.34%), Query Frame = 1 
Query:  394 QVTRLWNLPNVLTVGRIALIPIFAMFFYASLPRRNVWCAAIFGGAALTDWFDGYIARTRGLETPFGAFLDPVADKLMVSTALILLCERLGPWMT-ICSAIILCRELAVSALREWMAQLGLRETVKVGNAGKWKTATQASALPSPSSPSSQMIAVNLLLLLEPGATVTLLDPVVFM-PLAKGLLYISTVLTVTSGSSYLRAAWPTL 1002
            Q+  LWN+PN+LT+ R+  IPIFA  FY  +P RN   AAIF  A+ TDW DGY+AR   + +PFGAFLDPVADKLMV++AL+LL    G W+  + +AIIL RE+ VSALREWMA  G R  V+VG AGK KTA Q             M+++ LLLL + GA   L  PV  + P A  LLY+STVLTVTSG  YL+AAWP L
Sbjct:  136 QIDNLWNIPNILTMLRVVAIPIFAFVFYLPVPWRNKATAAIFAVASATDWLDGYLARKWKITSPFGAFLDPVADKLMVASALVLLAGSEGGWVVAVPAAIILAREITVSALREWMAGRGERSKVQVGMAGKVKTACQ-------------MVSLILLLLAQKGADCPL--PVSLLHPAALALLYLSTVLTVTSGWGYLQAAWPAL 325
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BLAST of mRNA_A-nodosum_M_contig1031.45.2 vs. uniprot
Match: W7TJV8_9STRA (Cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJV8_9STRA)

HSP 1 Score: 179 bits (454), Expect = 6.150e-50
Identity = 100/213 (46.95%), Postives = 134/213 (62.91%), Query Frame = 1 
Query:  367 GVSDGAEEGQVTRLWNLPNVLTVGRIALIPIFAMFFYASLPRRNVWCAAIFGGAALTDWFDGYIARTRGLETPFGAFLDPVADKLMVSTALILLCERLG-PWMTICSAIILCRELAVSALREWMAQLGLRETVKVGNAGKWKTATQASALPSPSSPSSQMIAVNLLLLLEPGATVTLLDPVVFMPLAKGLLYISTVLTVTSGSSYLRAAWPTL 1002
            G +  +  G    LWNLPN+LT+ R+  IP+  + +Y S   RN  C+ +F  AA+TDW DGY+AR   L +P GAFLDPVADKLMV+TAL+L+ +RL  P +T+ +AII+CRE+ VSALREWMA  G R+TV VG  GK+KTATQ             M+A+++LL ++P            + +  GLL  S VLTV S   Y++AAWP L
Sbjct:  143 GGNAASNRGNEPSLWNLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQ-------------MLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPAL 342
[Close]
BLAST of mRNA_A-nodosum_M_contig1031.45.2 vs. uniprot
Match: A0A3E0H751_9GAMM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Paraperlucidibaca baekdonensis TaxID=748120 RepID=A0A3E0H751_9GAMM)

HSP 1 Score: 169 bits (428), Expect = 5.340e-48
Identity = 98/202 (48.51%), Postives = 125/202 (61.88%), Query Frame = 1 
Query:  406 LWNLPNVLTVGRIALIPIFAMFFYASLPRRNVWCAAIFGGAALTDWFDGYIARTRGLETPFGAFLDPVADKLMVSTALILLCE-RLGPWMTICSAIILCRELAVSALREWMAQLGLRETVKVGNAGKWKTATQASALPSPSSPSSQMIAVNLLLLLEPGATVTLLDPVVFMPLAKGLLYISTVLTVTSGSSYLRAAWPTLVD 1008
            LWN+PN+LTV R+ LIP+  +  Y+ +  RN   AA+F  AA+TDWFDGY+ART    + FG FLDPVADKLMV+ ALILL E      M + + +I+ RE+ +SALREWMA++G R  V V   GKWKTA             +QM+++ LLLL          D     PLA GLLYIS VLT+ S   YL AAWP+L +
Sbjct:   10 LWNIPNILTVSRVGLIPVLLVLAYSPIGYRNEIAAAVFAFAAITDWFDGYLARTLNQGSAFGRFLDPVADKLMVAAALILLVEWHAHVVMVVPAIVIISREITISALREWMAEIGQRAQVAVSAIGKWKTA-------------AQMVSITLLLL----------DWSALNPLAWGLLYISVVLTLWSMCIYLVAAWPSLSE 188
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BLAST of mRNA_A-nodosum_M_contig1031.45.2 vs. uniprot
Match: A0A1G3EAW1_9GAMM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Pseudomonadales bacterium RIFCSPLOWO2_12_59_9 TaxID=1802009 RepID=A0A1G3EAW1_9GAMM)

HSP 1 Score: 167 bits (423), Expect = 2.640e-47
Identity = 98/206 (47.57%), Postives = 129/206 (62.62%), Query Frame = 1 
Query:  412 NLPNVLTVGRIALIPIFAMFFYASLPRRNVWCAAIFGGAALTDWFDGYIARTRGLETPFGAFLDPVADKLMVSTALILLCE-RLGPWMTICSAIILCRELAVSALREWMAQLGLRETVKVGNAGKWKTATQASALPSPSSPSSQMIAVNLLLLLEPGATVTLLDPVVFMPLAKGLLYISTVLTVTSGSSYLRAAWPTLVDPRPRKK 1026
            N+PN+LTV R+ LIP+F + FY       +  +A+F  AA TDW DGY+AR     TPFGAFLDPVADKL+V+ AL+LL E     W+T+ + II+ RE+ VSALREWMA++G R  V V + GKWKTA             +QM+A+ +LL + P  +V       ++ L  GLLYIS  LT+ S + YLRAAWP L +  P KK
Sbjct:    2 NIPNLLTVLRVLLIPVFVLLFYLPFSWSPLAVSAVFAFAAATDWLDGYLARVLQQSTPFGAFLDPVADKLIVAVALVLLVEAHHNLWLTLPAIIIISREIVVSALREWMAEIGARAQVAVSDLGKWKTA-------------AQMLALVILLAIPPQFSV-------WVGLGYGLLYISAALTLLSMAQYLRAAWPHLSNT-PEKK 186
[Close]
BLAST of mRNA_A-nodosum_M_contig1031.45.2 vs. uniprot
Match: A0A139SJX3_9GAMM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Ventosimonas gracilis TaxID=1680762 RepID=A0A139SJX3_9GAMM)

HSP 1 Score: 167 bits (424), Expect = 3.050e-47
Identity = 97/204 (47.55%), Postives = 124/204 (60.78%), Query Frame = 1 
Query:  397 VTRLWNLPNVLTVGRIALIPIFAMFFYASLPRRNVWCAAIFGGAALTDWFDGYIARTRGLETPFGAFLDPVADKLMVSTALILLCERLGP-WMTICSAIILCRELAVSALREWMAQLGLRETVKVGNAGKWKTATQASALPSPSSPSSQMIAVNLLLLLEPGATVTLLDPVVFMPLAK-GLLYISTVLTVTSGSSYLRAAWPTL 1002
            V  + N+PN+LT  R+ LIPIF + FY   P  ++W AAI+G AA+TDW DGY+AR     TPFGAFLDPVADKLMV+  L+LL  +    W+T+C+ II+ RE+ +SALREWMA +G +  V V   GKWKT  Q SALP              +L+L P  +        F P+    LL I+ VLT+ S   YLRAAWP L
Sbjct:   15 VNTIPNIPNLLTALRVLLIPIFIVLFYLPTPGNHLWAAAIYGLAAITDWLDGYLARRLKQSTPFGAFLDPVADKLMVTVTLVLLAHQQDNLWLTLCAVIIIGREIVISALREWMAGIGAQAQVAVSWMGKWKTLVQMSALP--------------ILILNPPPSSG------FWPITGYSLLLIAAVLTLWSMYEYLRAAWPYL 198
[Close]
BLAST of mRNA_A-nodosum_M_contig1031.45.2 vs. uniprot
Match: A0A257D3X3_9PSED (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Pseudomonas sp. PGPPP3 TaxID=2015555 RepID=A0A257D3X3_9PSED)

HSP 1 Score: 167 bits (422), Expect = 3.950e-47
Identity = 94/198 (47.47%), Postives = 125/198 (63.13%), Query Frame = 1 
Query:  412 NLPNVLTVGRIALIPIFAMFFYASLPRRNVWCAAIFGGAALTDWFDGYIARTRGLETPFGAFLDPVADKLMVSTALILLC-ERLGPWMTICSAIILCRELAVSALREWMAQLGLRETVKVGNAGKWKTATQASALPSPSSPSSQMIAVNLLLLLEPGATVTLLDPVVFMPLAKGLLYISTVLTVTSGSSYLRAAWPTL 1002
            N+PN+LTV R+ LIP+F + FY      ++  +A+F  AA TDW DGY+AR     TPFGAFLDPVADKL+V+ AL+LL  E    W+T+ +A+I+ RE+ VSALREWMA+LG R  V V N GKWKTA             +QM+A+ +LL   P  +        ++ L  GLL++S  LT+ S + YLRAAWP L
Sbjct:    4 NIPNLLTVLRVLLIPVFVLLFYLPFSWSHLAASAVFAFAAATDWLDGYLARRLQQSTPFGAFLDPVADKLIVAVALVLLVDEHASLWLTLPAAVIISREIVVSALREWMAELGARAQVAVSNVGKWKTA-------------AQMLALVILLANSPQFSF-------WIGLGYGLLFVSAALTLWSMTQYLRAAWPHL 181
[Close]
BLAST of mRNA_A-nodosum_M_contig1031.45.2 vs. uniprot
Match: A0A831W802_9GAMM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A831W802_9GAMM)

HSP 1 Score: 167 bits (422), Expect = 4.200e-47
Identity = 97/204 (47.55%), Postives = 127/204 (62.25%), Query Frame = 1 
Query:  406 LWNLPNVLTVGRIALIPIFAMFFYASLPRRNVWCAAIFGGAALTDWFDGYIARTRGLETPFGAFLDPVADKLMVSTALILL-CERLGPWMTICSAIILCRELAVSALREWMAQLGLRETVKVGNAGKWKTATQASALPSPSSPSSQMIAVNLLLLLEPGATVTLLDPVVFMPLAKGLLYISTVLTVTSGSSYLRAAWPTLVDPR 1014
            +W++PN+LT  RI +IP+F   FY   P  +   A +F  AA TDW DG++AR  GL +P GAFLDPVADKLMV+TAL+LL  +   PWM I +A+I+ RE+ +SALREWMA+LG R TV V   GK+KTATQ             M A+ LL+   P      L  +    + + LLYI+ VLT+ S   YLRAAWP+L D +
Sbjct:    1 MWSIPNLLTFSRIIMIPVFIGLFYLPAPWNHQVAALVFMIAAFTDWLDGFLARRMGLVSPLGAFLDPVADKLMVATALVLLVADNPSPWMAISAAVIIGREITISALREWMAELGSRTTVAVSLIGKFKTATQ-------------MGAITLLIYRHP------LFGLPTYRIGEILLYIAVVLTLWSMMVYLRAAWPSLSDKK 185
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1031.45.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2F5_9PHAE4.460e-10063.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZDG0_9STRA6.050e-7156.68CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A7S2V0D2_9STRA5.710e-5554.15Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2UZN3_9STRA1.530e-5354.15Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TJV8_9STRA6.150e-5046.95Cdp-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A3E0H751_9GAMM5.340e-4848.51CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A1G3EAW1_9GAMM2.640e-4747.57CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A139SJX3_9GAMM3.050e-4747.55CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A257D3X3_9PSED3.950e-4747.47CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A831W802_9GAMM4.200e-4747.55CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1031contigA-nodosum_M_contig1031:174696..182147 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FID2
PFAMsCDP-OH_P_transf
Model size1031
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017,RC02795
KEGG koko:K00995
KEGG ReactionR01801
KEGG Pathwayko00564,ko01100,map00564,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0006996,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009507,GO:0009526,GO:0009536,GO:0009657,GO:0009668,GO:0009941,GO:0009987,GO:0010027,GO:0016043,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0030145,GO:0031967,GO:0031975,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0046872,GO:0046914,GO:0061024,GO:0071704,GO:0071840,GO:0090407,GO:1901576
Exons5
Evalue3.95e-105
EggNOG OGsCOG0558@1|root,KOG1617@2759|Eukaryota
Ec32 ortholog descriptionCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Ec32 orthologEc-11_001460.1
EC2.7.8.5
Descriptioncardiolipin synthase activity
Cds size1029
COG categoryI
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866399.9192007-CDS-A-nodosum_M_contig1031:174695..1748871680866399.9192007-CDS-A-nodosum_M_contig1031:174695..174887Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1031 174696..174887 -
1680866399.9294384-CDS-A-nodosum_M_contig1031:177249..1773751680866399.9294384-CDS-A-nodosum_M_contig1031:177249..177375Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1031 177250..177375 -
1680866399.9375165-CDS-A-nodosum_M_contig1031:179851..1799441680866399.9375165-CDS-A-nodosum_M_contig1031:179851..179944Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1031 179852..179944 -
1680866399.951697-CDS-A-nodosum_M_contig1031:180869..1810311680866399.951697-CDS-A-nodosum_M_contig1031:180869..181031Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1031 180870..181031 -
1680866399.9608705-CDS-A-nodosum_M_contig1031:181691..1821471680866399.9608705-CDS-A-nodosum_M_contig1031:181691..182147Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1031 181692..182147 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1031.45.2prot_A-nodosum_M_contig1031.45.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1031 174696..182147 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1031.45.2

>prot_A-nodosum_M_contig1031.45.2 ID=prot_A-nodosum_M_contig1031.45.2|Name=mRNA_A-nodosum_M_contig1031.45.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=343bp
PAPIRALSAKTRGVELPDDDGGEGKKDMTPPQDPATTTSRSNAVRRVRPL
SGERNASTSAPSAPATGSAECHTETGTKTKSSSRNGGGGAAGLENDDGAP
VAASNKSGMMEADPTLVRVGVVGVSDGAEEGQVTRLWNLPNVLTVGRIAL
IPIFAMFFYASLPRRNVWCAAIFGGAALTDWFDGYIARTRGLETPFGAFL
DPVADKLMVSTALILLCERLGPWMTICSAIILCRELAVSALREWMAQLGL
RETVKVGNAGKWKTATQASALPSPSSPSSQMIAVNLLLLLEPGATVTLLD
PVVFMPLAKGLLYISTVLTVTSGSSYLRAAWPTLVDPRPRKK*
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mRNA from alignment at A-nodosum_M_contig1031:174696..182147-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1031.45.2 ID=mRNA_A-nodosum_M_contig1031.45.2|Name=mRNA_A-nodosum_M_contig1031.45.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7452bp|location=Sequence derived from alignment at A-nodosum_M_contig1031:174696..182147- (Ascophyllum nodosum dioecious)
CCTGCTCCGATCAGAGCTCTCTCTGCGAAAACGCGCGGAGTAGAGCTGCC
GGACGACGACGGGGGAGAAGGGAAAAAAGACATGACCCCGCCACAAGACC
CAGCAACAACAACTTCTCGCTCTAATGCTGTCAGACGTGTCAGACCATTG
TCAGGAGAACGGAACGCATCGACTTCTGCGCCATCGGCACCAGCGACAGG
GAGCGCCGAATGTCACACTGAGACTGGCACGAAAACGAAAAGCAGCAGCA
GGAACGGCGGCGGGGGCGCGGCCGGATTAGAGAATGATGACGGGGCGCCG
GTGGCGGCGAGTAATAAGTCGGGGATGATGGAGGCGGATCCGACGCTGGT
GCGCGTAGGTGTTGTTGGCGTTTCTGATGGGGCTGAGGAGGGGCAGGTGA
CGCGGCTGTGGAACTTGCCGAACGTCCTGACGGTGGGGAGGATTGCGTTG
ATTCCGGTGAGAAAGTTGTCTTGTCCGACGGTTGTTGCTGGATCAATGCA
TCCATAATGGGTTAAAATATACCTTGGTATCATGTATGTATGTATGGTCA
TGACTGCTGTGGATCGGTACATAGGCAGCATGTACGGGTCAGGGGTGAAG
TAAGCAGGAGCCCCCGGACTTGTTGTTTCGAAGGAATGGCGAAGGGGTAA
AAAACGCCTCCCCCACTTACGCAAACCCTCGTCTGTCTCGATCCTGTGAA
CAGTAGTCTACTATTAATAGGCTGCTGTTGTACATTACCCCAGTATATTT
TAGGAGCCCGGTGGTGCTATTTTTTACAGAGGGGTCGCGCGCAGAGCCGA
CCATCTCCCTCTAATATATGTACTCTTCGTAAGATTTTTGTTTTGTGCTT
TTTGTGCTCGGAGCGCACGCGCCATGAAGGACCATGAAGGATCATAAAGG
ATCATGGAGGATCATGAAGGACCATGAAGGATGAGGGTAACCCACCCCAA
GAATTCAATCGATCTTGACCTTCCCCGTGATTCAATACACAAGCATGTCG
CATTTTTTACCGAAGTTTTCGCTGCTAAGCGAAAGGACGGTGAAGGGCAC
GAACAAAAAATATCAACGAAAATAATACAAACCTCTATCCGTCTCTTTTC
CCATTCACCCGGCCAGATTTTCGCGATGTTTTTCTACGCGAGTCTGCCGA
GGCGAAACGTTTGGTGCGCGGCAATATTTGGCGGGGCGGCGCTGACCGAC
TGGTTCGACGGCTACATCGCGCGTACTCGGGGCCTGGAGACCCCCTTCGG
CGCTTTCCTCGACCCTGTGGCGGACAAGGTTCGCACACTAATACACTGAT
AGATAACCTATTATTAATTCTTAATATTTATAGTAGTCTGCGCCTTACTC
TCACCGCTATACATTAAGTATCATGGGCGATACCGTAGTGTCTTTATTAA
GATAAGAGATTCATTTGATGCATTGATATGATTGAATCGTTGATTGTTTC
ATTGAATCGTTGATTGATTCCTTGGTTCTATCGATGGTTCCAATGTAGGT
AGCTGAGCTCTACGTGGTCGACCAATGAAACGATATACCAGCATTTTTTT
TTTTTGAAGTGGCGGATTTCAGCTGTACCTGTAGATGACTAGACTCAAGC
TAGATATGGTTTTTATCCGTCATCAGTAGAATGAATAGCTTTAAGCTCGC
ACTAATACAGCCAGTACTTTTGTATAGGTACACGTCACGTCGATGGGTGA
TCTCCTGGGACCAGTCCGTTCCGACATATATATATATATATATTTTTTTT
TTGTCACGTTTTTTAGATCGCGCTTGTCCCTTTCGTGGACCCCCCTCCCC
CCCATTCGACTCATTTCCTCTTGGTACAAGTAGAAGATGTCACAAATCTG
GCTCCCAGCGATTCCAGCGCGTAACGCCTCTAGCTTTTCGATGAAAGCCG
TTAGGACTCTTGTGGTGTAGATGTACTGACTCACTGTTGATTCGTATTGA
TATGAATAGCACGAATCACACCAGACATTTTGTGCTGCCATTATATTGAT
GCCTGGTATATTTTATACTAGTAATAGTATATTTCGTCATCGATTTTCAC
GGAGAGCAGCAGGCGCTCAGTGATCCCCTTGCTGCGTACTGCACGTCGTA
TGATTCTATGATTCTATTCTGCCGTGAGATGGTGTGATATTGAGTGAGAT
AGTGAGTGACCCCTGTCTCGCACCCGCGGTCTTGAACAAACCCTCCAAAA
CAGCTCATGGTGTCGACCGCGCTTATCCTGCTGTGCGAGCGTCTGGGGCC
GTGGATGACCATCTGTTCGGCCATCATTCTATGCCGAGAGCTCGCGGTGA
GAGAAAATCAGAAATCACGTAAACCCGCTTCTATTAATATTAATGATACT
GCTCTACTAGCTCTGTATAGTTCTAGCCAGTAGCGATCGACAACATTGAA
GCAGCCCCTGAGATGATATAACGATAGGTGATACTTTTATAGGTGGTTAA
TACGGTAGCAGTTTTTTTTTAATGTGTGTGTTAGTGTATATTTGTGTTTT
TTTGTGGGGGGGAGGTTGTATCCCCTCCCCTCCCCTTCCCTCCGTATCTA
AAATAAAACCGTAGCTCTAACGGTACTATAGCGATAGCTCTAACATATAG
GTACCACGGGTAATGTATTAGCTCTACATGGCAACCGGTGGTGTACAAGT
TATGGCCACTTGGACTTGTTTTACAGACTCGTGGTAAAGTATTAGGGTTA
TTTATAGGGGTTTTATGAAGGGACAACAGTACTTGCACGGTCGGGCCAGG
ATTGTGATTGTTAATAAGTACGGTACATGGGTAAGAATAAGCAATCATGA
TACGATAAGAAGTACGGTACTATTTTTTGGAGGCGTTCTTGGGGGTAGAT
ATTCGTTTGGCAGTCCCCTTTGAAAATCTTACGCACGGAGTCGGTAAATG
GGGACCCGCGCTGTTTCGATCGTCGAGACACTCACACTCACATTCACACT
CACACTTTTTGGTGTTTTTATTTTATTTGAGAAATTTCTGGACCGATCAC
CCCTCCTCCCCTATTTTGAATATGTCTTCCCCTTTCTATCTTATGCAGTC
ATGTGCGTGTGTAGGCCTTTCCTTGTGTTGTCTCCCGTTAAGCTATACTT
CCATACAGTAGTACCGTGGTTTTTTGTCCCCCTAATTGTTTCCTAGACCA
CAAGATGAAGTGAGAGAACAAGAAGATTAAGTAGATATTTAAAAACTCTT
TTAATTAGTTTTTTAAGTATTAAGTAGATAATAGTGTCAAGCGCGTTGTT
ATAAGACTCCCATAGGAAAATTCAGGGCTTGTCTTGACAGACTTTCGCGG
GGAAAAATAATAATAATATTAGTAATAATAATAATCCATGGTACAGTTAA
CTTTTGCGTCGGATCACGTGAAAGACGGACGAAACAGCTCCAGCGGTAAC
AAGTGGAAGACGGTCATTCCCCTAAGCAGGAGTATGGATGTATGGTGACA
CATATATAGCAAGAGTAAGGATCAACCGGGTAAGGTTGCCAATCCTACTC
GTGGTCAGCTGAACAGGGAAAAATGAATATTTCCCTGTCCCCGTTCGCGC
CTTAGAATTTGGTCTCGCGAGACGGTTTAGGCAGTCCCGTCCCGCGTCAG
TATAGGGCTTATTGATTCGGTTGTTTTGCCACGGATGTTTTTTTTTGCCC
GACCGCATGTGGCGCGGTAGCTTATTCGAATTTATCGACTACGTGACCTT
GATGCTCGCAACTGTCAGTCCCAGTCCCAGTCGCGCTCTAGGACGCCGCA
GGCATGGAGAGTTTTGTGGGTTTCCTACTCTGTGTGTACGACCAGTTAAA
AAGAAATGTGGCGTGATGATCATCGCTACAGTAGTAAACGGTTACCTGGA
AGTTTTTCCCCTAAACAAGTAGGGCGCGACAGCTAGAGCTAGAGCTGCTG
TTGAGGGCGGAGGCGGCCAAGTGGCCTCTGGCCTCTGCGGTCAATAAGTT
GGGGTCCGGCGTGAGCGGCCAGCGGTGTCTTAGAAATTTTCCACGCGGAA
TCTACGCCGGTGTTTTGCAGCTGAGGGTTGCGGGTGCAAAGTGTTGTCCG
CTCTGCTTTGTTATCCTTATTGCCTTTAATATATAATTAGAAGAGGGTTG
GACCTCGGGCGAAGAGTGGGTCAACCCTATAATAATCCCCGGAATCCCCT
ATGTTGTGTTGGCTGTGCAGCTTAGGGTTGAGGCGCGACAGCGGCCTTTC
ATATGGAGGGTTTGGAGCCCAAGGAGAGCGGCCGACGGGGGCACAGCAAA
GTTCTTGTCCCCGAAGTCTCCTCCGGAGGCTCCCGCATCGCCCAAATTTC
TAAATCTAGAACTACAACAGTATAGCTCTAGCTCTAGAGCTATCTCGTTG
TGCACAGCAGTGGTACTGTCTGTACACTATTAATACTTACATTTCGTATT
CCACCGCGTTTTTTCTCTTTTTTCTTTTTCGGGCGATTATGGCCTCGGCA
TCCATAATCGATTTCAGGAAATGAAATGAACAAAAGTGATCGCTCGTCCA
ATCAACACCCAATTTTATATCCTGACGCATTGTGTACAATATTTTATTTG
CTTATTTTTCAAAGGCTTGTCAAGACACAGCCTCAGACTGCAAACACAGC
CCGCAAAAAAGTTGTACCGTAGTTAACATTTTTCCTTTTCTTCCTTTTTT
TTCTCCTCTTTTAACTCCTACTGATATTTATAATTGATAGCTCACGATTG
AAAATTACGCACAAATACTAATATTGGTATATACTTCGTAGTGAATATTT
TGCCGTACTTTGCCTTGCCCAGGTTAGCGCCCTCCGCGAGTGGATGGCAC
AGCTGGGCCTTCGAGAAACGGTCAAGGTTGGGAACGCCGGTAAATGGAAA
ACCGCAACGCAGGCGAGTGCCCTCCCCTCTCCCTCATCGCCTTCGAGCGT
AACGCCTCCGTACGGTTGTAAAATGGGGGAAGTGGGAAGATTCTCGGTCT
ACATTGTATGTATCTATGTTTGTGAGGGGTGGGGGGGAGGAGAGAGAGAG
AAAAGTGCAGCACACCTATCGTACAGTGCAACAATTGTTCTATGTAACCG
CCGGTGCTTTCAACATGCCCACTTCAGACCAATAGTGGGTGTGGGAAAGA
GAGGCGCATATTAATAGGTCCATGGTGACATCTGAAAAGGCAGCACCCGT
TTGGAACTACCTTGAGTTTTACCGGCCCTCTGCCGGCGGACTCTCGGCAG
TGAACGCCATCGGTACGCAATTGCGTGACCCGATGAACTCGGAACTGACC
CGATGGTGTATGGCGGTTTAAATAAATAAATGGACGCCGCCGCGGAACTT
GGGAGGAATTCCGTAAGCTACAGATTCAGCATGAGTATGGAGATGAGCAG
GCTGACACGGGGAGGGACTGCCGAACCCGTCTTGCGAGACCGAATTCTCA
GGCGCGAACGGGGACAAGGGAAAATATCGTTTTCCCTGTTCAGCTGACCA
CGAGCAGGATTGGCAACCTTACCCTGTTGATGCTTCTCTTGTTATATGTG
GTGACCATACATACCAGATAGAACAGGTACAAAACCCTTACATAAGGGGA
CTAACAAACACCAGACGCCATGATATTACTTTCGACCGCAAGCATCCGAG
GTAGACTATGGTACAGTATTATGGTAGAAAAGAAATGCTGTACCCAGTAA
CTTGTCACGTCACCTACTGTTAGTAGCTGTAGTATTTATATATATATATA
TATAACGTATGCCATGGTACTTGGTATAATAGTCATCATGCGGTAGACGA
GATGGGGGAAGATTGATCCCCGAAGGTCGTGCGTGTTTTCGTATCCGGGG
AGAATTGAGTTCCTCCCCTCCCACTCCGAACAAAGCTCACGTGTCCCTCT
GAATGGGTCGGAGAGAGGATTGCGAGACGACAAGACAAAATTCGGGCACG
CCCTGGATAAAAAAAATTGCCCGCACCCGAGGGGAGAATACCGTAATATC
CTCTGAGCCCACCCCCCCCTTGAGTTCCCCCCCCTCCCCCAAATTTGGCC
GAAATGGGTATAAAGACGTTGAGTTATCCCGGGGGGATTTTTTTTTTTTT
AAAGATTCCCCCCTACCTTTGAGTTGACGCCGGGGGGATCTTTTTCCGCA
ATAAAAAACGCCCGCCCCCGGGGGGAACACAGAAAAATCGGGAGTATTCC
TTCCGGCAACTGTCAATTATTTGCTGTTGTTATGTTGGTTGTTGTTCTCG
GTGTTGTTGGCACAGAAATTGAATAAATATCGGAAAAGTCCGAGCGTTTG
CGTGTTCTTTTCGGAAGATTCCTCCGGGGACTTTTCCCTCCGGGGTGTTT
TTCTTTTTTAGATCCTCCGGGGTGATCGTTTTCCGCAAACATATACATTC
CCCCGCGGGGGGAACTCAAAGGATATGACGGTATTCGCGTGAACTCGAAA
GAAAATTATTCGCGTGCCACTCGAGGCGAGAAGACCCACATGTATGTACG
GTCACACATATAGCAAGAGTATGGATCAACCGTGTAAGGTTGCCAATGCT
GCTCGTGGTCAGCTGAACAGGGAAAATGAATATTTCCCTTGTCCGCGTTC
GCGCCTGAGTAATTCGCTTGCCACTCAAGGAGAGAATACCCACATGTATG
TATGGTCACACATATAGCAAGAGTATGGATCAACCGGGTAAGGTTGCCTA
TCCTGCTCGTGGCAATATTTCCCTGTCCGCGTTCGCGCCTGAGAATTTGG
TCTCGCGAGACGGGGTTCGGCAGTCCCGTCCCGTGTCAGCCTGCTCATCT
TCATACTCAGGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGATTTC
CGCGGCGGCGTCCATTTATTTCTTCAAACTTGCCATACGCCCATCGCGTC
AGTCCCGAGTTTATCGGGTCACGCATTTGCGTACCGATGGCGTTCACTGC
CGAAAGTCCGCCGGCACAGGGCCAGTAAACCTCAAGGTAGTTCCGAACGA
GTGCTGCTTTACTTAGCAGGTCACCATGGACCAATTAATGTGCACCTCTC
TTTCCCACACCCACTATTCGTATGAAGTGGGCATGTTGAAAGTACCGGCA
CATATACTCTACTGATAGAACAGAAAAAAACGCGCCGTTTGTGTAGGTTA
TCACTTTTGACATGGTTTCGCCATATTCCCAACCACATTTCCAACCGTGG
CATTTTCTACTCTGAAACATGAACCCCCCCCCGCGCGCGCGCGCCCCTCT
CTCGCCACTTTACTATCTCCATACACACACCCTGCCACGGTGACCAATCC
TCGGCGGCAGCAGATGATCGCGGTGAACCTTCTGCTTTTACTGGAGCCAG
GAGCGACGGTCACGCTGTTGGACCCCGTTGTCTTTATGCCCCTGGCGAAG
GGCCTCCTCTACATATCTACGGTGTTGACGGTTACCTCGGGGAGCAGTTA
CCTCAGGGCGGCCTGGCCGACGCTTGTTGATCCCAGGCCTCGAAAAAAGT
GA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1031:174696..182147-

>mRNA_A-nodosum_M_contig1031.45.2 ID=mRNA_A-nodosum_M_contig1031.45.2|Name=mRNA_A-nodosum_M_contig1031.45.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1029bp|location=Sequence derived from alignment at A-nodosum_M_contig1031:174696..182147- (Ascophyllum nodosum dioecious)
CCTGCTCCGATCAGAGCTCTCTCTGCGAAAACGCGCGGAGTAGAGCTGCC
GGACGACGACGGGGGAGAAGGGAAAAAAGACATGACCCCGCCACAAGACC
CAGCAACAACAACTTCTCGCTCTAATGCTGTCAGACGTGTCAGACCATTG
TCAGGAGAACGGAACGCATCGACTTCTGCGCCATCGGCACCAGCGACAGG
GAGCGCCGAATGTCACACTGAGACTGGCACGAAAACGAAAAGCAGCAGCA
GGAACGGCGGCGGGGGCGCGGCCGGATTAGAGAATGATGACGGGGCGCCG
GTGGCGGCGAGTAATAAGTCGGGGATGATGGAGGCGGATCCGACGCTGGT
GCGCGTAGGTGTTGTTGGCGTTTCTGATGGGGCTGAGGAGGGGCAGGTGA
CGCGGCTGTGGAACTTGCCGAACGTCCTGACGGTGGGGAGGATTGCGTTG
ATTCCGATTTTCGCGATGTTTTTCTACGCGAGTCTGCCGAGGCGAAACGT
TTGGTGCGCGGCAATATTTGGCGGGGCGGCGCTGACCGACTGGTTCGACG
GCTACATCGCGCGTACTCGGGGCCTGGAGACCCCCTTCGGCGCTTTCCTC
GACCCTGTGGCGGACAAGCTCATGGTGTCGACCGCGCTTATCCTGCTGTG
CGAGCGTCTGGGGCCGTGGATGACCATCTGTTCGGCCATCATTCTATGCC
GAGAGCTCGCGGTTAGCGCCCTCCGCGAGTGGATGGCACAGCTGGGCCTT
CGAGAAACGGTCAAGGTTGGGAACGCCGGTAAATGGAAAACCGCAACGCA
GGCGAGTGCCCTCCCCTCTCCCTCATCGCCTTCGAGCCAGATGATCGCGG
TGAACCTTCTGCTTTTACTGGAGCCAGGAGCGACGGTCACGCTGTTGGAC
CCCGTTGTCTTTATGCCCCTGGCGAAGGGCCTCCTCTACATATCTACGGT
GTTGACGGTTACCTCGGGGAGCAGTTACCTCAGGGCGGCCTGGCCGACGC
TTGTTGATCCCAGGCCTCGAAAAAAGTGA
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