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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 290 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 288 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866397.2466762-CDS-A-nodosum_M_contig1030:188257..188391 | 1680866397.2466762-CDS-A-nodosum_M_contig1030:188257..188391 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1030 188258..188391 + |
| 1680866397.2583232-CDS-A-nodosum_M_contig1030:197005..197159 | 1680866397.2583232-CDS-A-nodosum_M_contig1030:197005..197159 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1030 197006..197159 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1030.25.1 >prot_A-nodosum_M_contig1030.25.1 ID=prot_A-nodosum_M_contig1030.25.1|Name=mRNA_A-nodosum_M_contig1030.25.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=96bp
SPLCRREDPTGGRRNTQCVTTAAVSVSDLLPFLHRWAGRGFWDKMTAMST
AKILLYTKTLISTLKTHAFRTKTPIATPKTTISTPEPIMPTSLYLQ back to topmRNA from alignment at A-nodosum_M_contig1030:188258..197160+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1030.25.1 ID=mRNA_A-nodosum_M_contig1030.25.1|Name=mRNA_A-nodosum_M_contig1030.25.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8903bp|location=Sequence derived from alignment at A-nodosum_M_contig1030:188258..197160+ (Ascophyllum nodosum dioecious)
TCTCCCTTGTGTCGCCGCGAGGACCCTACCGGCGGGAGGAGGAACACGCA
ATGCGTTACTACAGCGGCGGTCTCGGTCAGCGATTTGTTGCCATTCCTTC
ACCGCTGGGCTGGACGTGGCTTCTGGGATAAAATGCAAGTACGTCTCTAT
CTCGCCTCCGAAATCCGAACCCCCCCGCCCCGAAGCGCTCGCCATTGCGA
TCCCCTGCGACTTAGAATTTTCGCGCCCCGGAATGTGCGTTCGTTCCAGC
CTTGAAAAGACTTTTGCTCTCAACATCTGATGATGTACATCTCTTAACGA
CGATGTTTAATAGTACAACCCCCGCGCGGACTTTGTTGCAAAAATACAAC
ACGCGCTGTGAAAGTGCAAACGTTGACGTTCCCTCCAACACTGATAGGAC
TACAGCTATACAGCTGGTAATACACTCAATGCGTCACGCATCCTCTGATT
CTATTTTCACGTCGCCAATTCCAATGGTAGCGTGACCATGGCCTGACCCG
CTTGGGTCTCCGGATGGCCCATTAACGCAAGAAATTACACTTGAAATGGT
ACAGATTCGTACCGCACAGCGAAACTCAACGCTGATGCCAACTCTGCCCC
CCGGGTGATTTAGCGACTAGGATAAACCCTACAACTCGCTTACCGCGATG
TGGACCACATTTGAAAAATTACAGCACTAAACCTCGCCCACAAGAGGCGG
TACCCGAGCTCTCATGCTCCCTTGACTGTAACCGATCCACTTACTTCAAT
CGCCCCGCTGTAGCGTAAAAACAGTTAGCGATCAGGGATAGACCCTATGA
CTCGCTTCCCGCGATGTGAACCACATCTGCAAGTTTACAGTACTAAGCCT
CGCCCACAGGCGTCGCCCGAGCTATCATGCTCCCTCGACTATAATCAGTC
CACTTCCTCCAATCGCTCCGCTGTAGCGTAAAAACAGTTAGCGATCAGGA
TAGACCCTGTGACTCGCTTCCGCGATGTGAACCACATCTGCAAGTTTACA
GTACTAAGCCTCAAGCGTCGCCCGAGCTATCATGCTCCCTCGACTATAAT
CAGTCCACTTCCTCCAATCGCTCCGTTGTAGCGTAAAAACAGTTAGCGAT
CACGGATAGACCTTATGACTCGCTTCCCGCGATGTGAACCACATTTGCAA
GTTTACAGTACTAAGCCTCGCCCACAGGCGTCGCCCGAGCTATCATGCTC
CCTCGACTATAACCAGTCCACTTACTCCAATCGCTCCGCTGTAGCGTAAA
AACTGTTAGCGATCAGGGATAGACCCTACGACTCGCTTACCGAAATGCGA
ACCATGTTTGCACATTTACAGCACTTAACCTCGCCCACAATAAGGCGGCG
CTCGAGCTCTCATGCTCTCTTGACTGTCACCACTCAGGCTACCTCACTCG
CTCCACTGCAGTATAACAGTGTTTAGTAACTAGGGAAAAACCCTACGACT
AGCTTGCAGCAATATGGACTGCGTTTGAAAAATTACAGTACTTATACCTA
GCCTACTATAGATGGCGGCGCTATTAGCAGTCGCTGTTGTATATGTGGCC
CGACCGGACACAGCCTCCGGCGGTGCCTTGCCCCCTTTAAAAATAGTTCC
GGACTCACGCACGCTACGTCGCCGCAGTCCCGTCTCACCCCCTTGCACCC
TCGAGTGCCCTGCCGAGGCCCTCCTCCGCACCTTCCAGGTAATAGTTCCG
GCCTCACGCACGCTACGTCGCCGCAGTCGACTCACCCCCTGCACCCTCGA
GTGCCCTGCCGAGGCCCTCCTCCGCACCTTCAAGGTAATAGTTCCGGGCT
CACGCACGCTACGTCGTCGCAGTCCCGACTCACCCCTCTGCACCCTCGAG
TGCCCAGCCGAGGCCCTCCTCCGCACCTTCAAGGTAATAGTTCTGGACTC
ACGCACGCGACAAACGTCGCCGCAGTCCCGACCCAACCTCCTGCGCCCTC
GAGCGCCTCTGGCCCTGGCCCAGCCTTCACGGCTGCTCCTACCATGCGTT
ATGGCTCTGCGTTTTCGGGTAACACCAACCCAAACGCCCGCCGACCAGGT
ACGTTCCAGGTGCCACCTGCTCCTACTCCCGTGACGGTTCGACGACAGTG
CCACATCGGTATCCCTGTCTACGGCATTATCCCACGGATGCCCCACTCCT
CCTCCAGTTAACACCAACACACAGGTATCTTATACTGGACGACATTGCGA
CCGTGCCACCCCCCTCTCACCCCTGAGCTTGCCGCCTCGGACGGAAATGA
CCCACCAACCGGGACGTCAATTCAGAGGTGTGGAGACACTGGTACAAGCG
ACACGGACATACGGGTGCTCTGTCCCTCTCGCGATCGCCCCCCCACGGAC
ATGCTACCACGAGCGTGGGTTCCTCTGGGTTCAGTGCAGGCTTGGTCAGC
TTGCCTGACATTCATGAACTCCTCTCGATGACAGCAGTGGTGATGCAGAC
TCCAAAGTAGACGCACACCCTCCGTACCCAATCCAGATTGGTGTGTGCCC
CCAATCTCGTCAAACACCGGACCTTGGGACTCCGGCCTCGCAGCTGCCAG
CCGTTGGTCACACACGAGATCGTGCCGCGACTGGACCTGCCGCGGTGATT
CCGCACCATTTTCTGGACGCAGAGAATGCCTTCCTAAACAGGGAAGAAGA
CCTCCCCACTCATCATGGGCCAGCTGCTCAGAGCCCCCAGCACCAATGCA
TAATACCAATGCAACAGCTGACTTGAGCACCTGTTACGGTACTTCCGCGA
CATTGGGCCAGCACAAAGCCTGCCCAGATCGCGATGATTCTGAACGGACG
CGGCCTGTCACAACCCCCTCCGTTCCTCCTTCGCATGACTTCGCATGACT
TACGCCCCTCTTTCGTCCCGCTTGAACACGCCTACGCCACCTATGACGCA
TCACTTACATACATCAATGACGATGTCGTCCTTTTCTGACATCCACCTTC
GGTTTTCTCACAATAAACGCTGTCACCGCTCACTGTGGATCTTGTCGAAT
ACAATTGCGCTGAACAGTTCATGATGGCCTCGAAAGCCCGCCTATTTGGC
GATGATACGGCGCTCTCAGCCATTCTTGCTTCAAATGACCCGAGACCAAA
AATGCCTCGGCCGTCAAGTGCGTCACTTTGACCACGAGCTATGGCAATCC
GCATGCGAAAGCATTGTACTACATGGCAACCCTGCAAAATTTTTCCCAAA
ACGAGGAGATGCACCTTGCCCTTATTCAAACCGGCAACGCCGCCGCCCCA
CCGAAGCAAGACCAACGCAACGGCTGACTTGAGCGCTTGTAACGGTACTT
CCGCGATACTTGGCCAGCACAAAGCCCGCCCGGATCGCGATGACTCTCAA
CGGACGCGGTCTGTCACAACCCTCTCCGTTCCTCTCTCGCATGGCGCTGA
GAATGCCTTTCTTACAGGAAAGAAGACCCCCCCATTCATCATGGGCAAGC
AGCTCAGAGACCCCACTATGGATGCATAATACCAATGCTACTGCTGACGT
GAGCCCTTATGACGGTATATCCGCGATTCTCGGCCAGCACAAAGCCTGTG
CCCAGATCGCGATGATAATGAACGGACGCGGCCTGTCCCCACCCCCTCCG
TTCGGACTCCGCAGCCTATATACCCACACTTCGTACAACTTGACATGGCA
CACGGCGCCTATGATGCACCGCTCACATAAATTAGCGACGATGTCGTCTT
ATTCTGGCTGcCCCCTTCGCCTTTTTCCCAAAGAACCTAGTCGAATACGA
TTGTGCAGAACAGTTCCTCGAATGCTTGCCTATTTGGCGACGACTTGGCG
CTCTCGGCAATACGTGCTACTGACGATCCCCGAGAGCAAAAACGCCTCGA
CCGTCATGTACGCCACTTCGATCCCGATTTCTGGCAGCAAGAATGCGAAA
ATTCAGCCCTCCGAGGCAACCTGGCAAAATTCTCCCAGAACGAGAAAATG
CACCCGGCCCTCGTGCACACTGTGCCCACGCCGCCTCGCCGAAGCGAGCC
CCCATGACAAATTGTGGGGCATCGGCCTGAGCGCGTGCGACCCCGAGAGC
ACAAACGCCTCGACAGTCATGTGCGCCACTTTGGCCACGACCTCTTGCAA
AAAAAAAAAAAAAAAAAAAAAACTGCGACATTCTCACAAAAAGATAAGAT
ACGCCTTGCCCTTGGACATATTGGCGAACACCACCTCGCCGAAGCTTGCC
ACATAATAAATTGTGGTGTACCGGCCTGAGCGCTTGCAACCGTACGGTAG
AAACCTGCTGGGTCAGGCCTTAAAGAACGCCCGCAAAATTATTCGCCTAG
ATTCTACTACAGCGCCCGACAACCCCGCACCGGAAGCCCCAGTCCCCGGA
ATGTCACCGGCGATACGGTCTTCGAGGTAGATACGATTACTCACCTCCGC
CTCGACACGACCCCAGTTCCTGCCAATGCCCAAACGGCCGCGCTCTCGGC
TTTCACCGAATCGGTGCCCGATGACCGGGCCCCTGAGGTACTTTTGGCTC
AAGAACAGCGCGCCGACGCGcCCCTCATGCCTGAACAAGGCCCTGATCTG
ATCGGTGGCATCGTCACCATGGACGACGCCACCTTCACCACCTTATTAAC
ACTCCATAGTGGAGTTTTCGCGACTTCTCGCTTCGACTGCCGCGCCATCT
TGGACTCCTACCTCGCCGCTGGCCTCATCCAGCACTCCACGTCACCGTAG
TCGAGCCCCCTCGTATGTGTTCAGAAGAAATCGGGCGGCATCCGAATCAC
AGTCAACTACCAAAACTGAATAAGGTCACCGAGATCCCACAGATTGCGAT
CCCCCTCGTCGACCAAGTGCTTGACACCCTCGGCGGCGGCTCGGTTTCCT
CAGTGTTCGACCTTTTCTCGGGGTTTACTCAGTTAACAATCCATCCGGAT
ACTATCCCCCTGACTGCCTTTTGCACCCCCAACGGACTCTATGAATGGCC
CCGCATGCCCCAGGCGCAGCCGGCACTCCTGCTTGGTTCGTCTCGGTCTT
GAGACTCGTCACGGCCGGTCTCGATAACATTCTCATGTATCTTGACGACG
CAATCGGCCCGGACGACTGTCCCCTCCATTATGTAGCGACACTCGCTACC
TTCTTCGCGCGACTACATGTCCATAAACTCAAGCTCTCCCCTGATAAATC
CCGGATTAGCGCCACACGTGTTGACTTTTTGGGTCACGTCATCTTGGCAG
ATGGCGTTCGCCCCAATGACGCTCGCGTCGCCGCCCTCGCCCGCATGCCT
ATGCCCACGGGTATCAAACAGCTTCGCAGCCTACTTGGCGGTCTTAGTTA
TTACCGCAAGTTCCTGCCTAACATGGCTTACCACATACGCCCGGTGACGG
CCCTCCTGGAAAAGAGCGCCGCGTTCGAATTCGCCTCCGCAATGGAGGAT
ACAGTTCGCACTCTTCTCGCGGAACTCGCCGCACCCCCTATACTTGTCTT
TCCGGACTGGGACGCGGTCATCGACATGTCTCGACCCTTGCGCCTCCGCC
CTGACGGATCCAGACAATCTTGGCGTTTATCTCATCCGCGCGTGCGGACT
CACCACCCCTTCCTGCCCCGCCCCTGGCGTGAGCTTGGGTGGGCTGGTCC
CCTCGCCGGATATCCCAGTCTTGGGTGGGCTAGCTCCCTCACCGTATATG
CCGGTCTTGGGTGGGCTACCCCTGACATCAGACGACTTCCGGACACACCG
TGCCCCGCTACCGTCTCCCTCTGCGACTACTTGCCCTCGTTGCCCTCGCG
CGACCTTTCCCCAGGCGCCCTACACAACCTACGCCATTAACGCCCGCGAC
GATGCCCCACGACCCACACGACGGGCACGAAGCCAAACCGCGATCTTAGA
TGGTAATACCCCATCGCGCTCGGACTATCGCACGGCCGCCCACAGTGGGT
TCGCCGCGTCCGCCGCTGCAGCGTCTCCTCCGCTCCGCACGTCGCCGCCT
CCGCGCTCGGCCCGCCTAGGCTCCACGACCTCCCCGGGTCGTCGCGCCCC
GATTAGCTTGACAAGCACAAACGTGAAGACCCCCTCTGCGACGCCACTCG
CCGATACATTCAGCTCGGATGCCCCAACATCACCTGACCTCACCATGCGA
CCTCATCCCCTCGCATCGACGTCCCGCCTCCACTGACATACTTGATCTCG
CCGCCAAAGGCCGCTTGATCCAGGGTGACTACGGTACTACATTATTCGTC
CGAAACCCCGTCACAGTAGCTTCCAGCCCAGTTAACACCCCTGCCCGCCT
CGGCCGGCTTCCCTTCAATGACCCCGTTCGCATCTATGTGCCACTTTTGG
CCAGACCTTGGATCATGCACGCATGCCACGCCGATGCCTTCTGTCATCTC
GGTGTTATGCGCACCCTCAAAATGCTTGAACTTTTTTACTGGTGGTTCGG
CATGGAAGTTTGCACGAAATAGTGGGTCCCCCGCTGCCTCATCAGGCGCG
TAAGACCTCCCGCCAGACAGTTCGCTGGCCGTCCTCCCCATCCCCCTGCC
CAACAGCCCTGGCGTTGCCGTCAGTGTTGACTATTTTGGGCCCTCGCCTA
TAACGGCTAAAGAAATTCCTACATCCTCCTTTTCACGGACCGCTTTAGCC
GTCGCGCAGACATGTGCTGTTACCACGGCCGAATTCACAGCCGAAGGCAC
CGCAAACAATGAACCCCAATTCTGCGCTCGATTAGCGACCGCCGTCTACA
AACTGCTCGGGATACAGCTCACATTGAGCGCCTATCACCCCAGTGGAAAT
GGAGGCGTAAAACATGTCAACCACACTATGGCTTAAATGCTAGCCATGGT
CTGTAACGAACACCAAAACGACTGGGACGTCCATCTTCCCCATGTCGAAT
ACTGCCTATAACAACACTGTTAGCGCCGCCACGGGCCTCGCCTCCAATGA
AGTCCATATTGGACGCCTGCCGCGCTCCCTCTCACCGTCTTTGATCGATC
ATATGGTGGTATACATCAGAACCTCGATCGCGACCAACTCGCCTACTGCG
ACCTTACTCGTGAGCCCCAACAACGTGCGTACGAACTTGTACGAGAACAA
CACGCCCTCACCGTCGCTCGGGTAAATGGGCGCAACTCCGCCCTCTCCGA
TGCCCTCCTCCACCGCCCCCAATATGCGGCCGGCGGATGGGTTTGGATTT
ATAACACCGCCGCCACTATCCGCCAAGGGTTGCGGAAAGGCGCCGACAAC
AAAGTTCTCGAAGAGAAACTCTCGCTGAACTTTACTGGACCCTTCAAGAT
CATCGCTGTTGGTCCCGCCCCAGCCGCCGACACTCCCGACGGCCGcCCCC
TTGGAGACAAGCTGTTATACCTTGACCTCCCTTCAAATCTTTCGGGCCCT
GCAGCCAAACCTCGCGTCACTGTGGCACGCTGCAAGCCCTGCGCCAACCC
ATACGATGCCGCCGCACACCGCTGCCGCGGTTACCTTCACTGCCGCCCCT
GTGGCCGCAACCGCCGCCGCCGTGCCCCCTGCACCGCCCCGGCCGGAACA
CTCGGCCCACGCGCCACTAACCACAGCGACCTCTGTCGCACCCCGTACAC
TGCCGCAGCACACTGCTACCGCGGTTACCTTCCCTGCCGCCCCTGTGGCC
GCAACCGCCGCCGCCGTGCCCCCTGCACCGCCCCGGCCGAAACACTCGGC
CCACGCGCCACTAACCACAGCGACCTCTGTCGCACCCCGTACACTGCCGC
AGCACACTGCTACCGCGGTTACCTTCACTGCCGCCCCTGTGGCCGCAACC
GCCGTCGCCGTGCCCCCTGCACCGCTCCGGCCGGAACACTCGGCCTTCGC
GCCATGTACCTGCTACGGCAGCGACTCGGCCCTCGCGCCATGTACCTCGG
CGGCTTTCATCGCCCCCACTGCGCCGCTACGGCAGCAGAACTCGGCCCTC
GTGCCATGTACCCCGGCGGCTTTCATCGCCCCCACTGTGCCGCTACGGCA
GCAAAACCCGGCCCTCGCGCCATGTACCTGCTACGGCAGCGACTCGGCCC
TCGCGCCATGTACCTCGGCGGCTTTCATCGCCCCCACTGCGCCGCTACGG
CAGCAGAACTCGGCCCTCGTGCCATGTACCCCGGCGGCTTTCATCGCCCC
CACTGTGCCGCTACGGCAGCAAAACCCGGCCCTCGCGCCATGTACCTGCT
ACGGCAGCGACTCGGCCCTCGCGCCATGTACCCCGGCGACTTTCATCGCC
CCCACTGCGCCACTACGGCAGCAGAACTCGGCCCTCGCGCCATGTACCTC
GGCGGTTTTTACCGCCCCCACTGCGTCGCAGCGGCGGCAAACGCCAGCCC
CTGCCACGGCCAATCTCGCGACTTTTGTCGCCCATGCTGCACTGCAGCCC
CTGGCTCCGGTCACCTCGGCGGTTTTCACCGCCCCCACTGCGTCGCAGCG
GCGGCAAACGCCAGCCCCTGCCACGGCCAATCTCGCGACTTGTATCGCCC
ATGCTGCACTGCAGCCCCCGGCTCCGGCCACCTCGCGTTTCCACGCCCCC
TGCGGCTCTTGGTGCCTCCAAAACCACGGTCGCACCAACCCCCTCCAAGG
CGTCTTACACGGCTTACCTCTCCCTCCCTTGCCCTCTCTCCCTCTGCGTT
CCTTCGCCCTCTCAGGTTTACCATGTCTACACCGAGGACCCCCATGTCTA
CACCAAGGTTCGTCCTCTCATCCTCCCCCTGTCATCCCTCCTCTCGCCTG
CGTACTCAGGATCCCCTGTACTCCTCCCCTTTTTTTTTGCCTCCTCAGGA
CCGCTATGTCTACGGCTAAGATTCTATTGTACACCAAGACGCTTATATCT
ACGCTCAAGACACATGCATTTAGGACCAAGACGCCTATAGCTACGCCCAA
GACCACTATATCTACACCGGAGCCCATTATGCCTACCAGTTTATATCTAC
AGC back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1030:188258..197160+ >mRNA_A-nodosum_M_contig1030.25.1 ID=mRNA_A-nodosum_M_contig1030.25.1|Name=mRNA_A-nodosum_M_contig1030.25.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=288bp|location=Sequence derived from alignment at A-nodosum_M_contig1030:188258..197160+ (Ascophyllum nodosum dioecious)
TCTCCCTTGTGTCGCCGCGAGGACCCTACCGGCGGGAGGAGGAACACGCA
ATGCGTTACTACAGCGGCGGTCTCGGTCAGCGATTTGTTGCCATTCCTTC
ACCGCTGGGCTGGACGTGGCTTCTGGGATAAAATGACCGCTATGTCTACG
GCTAAGATTCTATTGTACACCAAGACGCTTATATCTACGCTCAAGACACA
TGCATTTAGGACCAAGACGCCTATAGCTACGCCCAAGACCACTATATCTA
CACCGGAGCCCATTATGCCTACCAGTTTATATCTACAG back to top
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