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Homology
BLAST of mRNA_A-nodosum_M_contig103.12.2 vs. uniprot
Match: D7FXG5_ECTSI (Arginine/serine-rich splicing factor 6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXG5_ECTSI) HSP 1 Score: 278 bits (712), Expect = 1.730e-83 Identity = 137/167 (82.04%), Postives = 149/167 (89.22%), Query Frame = 2
Query: 230 YTRDKDLDRAFRRYGRIEKIDVRMGFAFIEFDDRRDAEEAVSDMDGREIDGARIVVQPGRGHRPNGPKFATRRTEHRITIEGLDSHTSWQDLKARPRQIFGTAHRDFGRQAGQVLFSDIFFRHGRRWGVVEYLTREDMKTAIRQLDDTRLGGKYIRVREERSGRDSR 730
+TRD+DLDRAF RYGRIEKIDVRMGFAFIEF+DRRDAE+AV++MDGRE DGARIVVQPGRGHRPNGPKFATRRTEHRIT+EGLDSHTSWQDLK DFGRQAGQVL+SD+FFR GRRWGVVEY++R+DMK AIR LDDTRLGGKYIRVREE SGRDSR
Sbjct: 13 HTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTSWQDLK------------DFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKAAIRTLDDTRLGGKYIRVREENSGRDSR 167
BLAST of mRNA_A-nodosum_M_contig103.12.2 vs. uniprot
Match: A0A7S0Q5F1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5F1_9EUKA) HSP 1 Score: 129 bits (325), Expect = 2.930e-31 Identity = 62/143 (43.36%), Postives = 97/143 (67.83%), Query Frame = 2
Query: 230 YTRDKDLDRAFRRYGRIEKIDVRMGFAFIEFDDRRDAEEAVSDMDGREIDGARIVVQPGRGHRPNGPKFATRRTEHRITIEGLDSHTSWQDLKARPRQIFGTAHRDFGRQAGQVLFSDIFFRHGRRWGVVEYLTREDMKTAIR 658
YTR++DL+R F RYGR+E++D++ GFAF+EF D RDA++AV DM GR++DG RI V+ +G R G + + + RI +EGLD TSWQDLK DFGR+ G ++++D++ +++G++EY +ED + A++
Sbjct: 15 YTRERDLERVFDRYGRVERVDLKRGFAFVEFSDDRDADDAVYDMHGRDLDGRRITVEHAKGGR--GARGPAKGSGFRIKVEGLDMRTSWQDLK------------DFGRKVGDIMYTDVWVDGSKKFGIMEYGRKEDYEEALK 143
BLAST of mRNA_A-nodosum_M_contig103.12.2 vs. uniprot
Match: T1D6F1_9DIPT (Putative b52 (Fragment) n=1 Tax=Psorophora albipes TaxID=869069 RepID=T1D6F1_9DIPT) HSP 1 Score: 129 bits (324), Expect = 1.940e-29 Identity = 72/175 (41.14%), Postives = 109/175 (62.29%), Query Frame = 2
Query: 236 RDKDLDRAFRRYGRIEKIDVRMGFAFIEFDDRRDAEEAVSDMDGREIDGARIVVQPGRGH-RPNGPKFATRR------------TEHRITIEGLDSHTSWQDLKARPRQIFGTAHRDFGRQAGQVLFSDIFFRHGRRWGVVEYLTREDMKTAIRQLDDTRLGGKYIRVREERSGR 721
R++DL+R F+ YGRI +I ++ G+ F+EF+D RDA++AV +M+G+++ G R+ ++P RG R +G + R T+HR+ +E L S SWQDLK D+ RQAG+V ++D R + GVVE+ T +MK AI+QLDDT L G+ IR++E+R GR
Sbjct: 16 RERDLERFFKGYGRITEILIKKGYGFVEFEDYRDADDAVYEMNGKKLLGERVTIEPARGTARGSGSRRERERRGGRSRYGPPLRTKHRLIVENLSSRISWQDLK------------DYMRQAGEVTYADAH-RDRKNEGVVEFATSSEMKAAIKQLDDTELNGRRIRLQEDRGGR 177
BLAST of mRNA_A-nodosum_M_contig103.12.2 vs. uniprot
Match: A0A182HC83_AEDAL (Uncharacterized protein n=4 Tax=Aedini TaxID=1056966 RepID=A0A182HC83_AEDAL) HSP 1 Score: 129 bits (325), Expect = 7.570e-29 Identity = 72/175 (41.14%), Postives = 108/175 (61.71%), Query Frame = 2
Query: 236 RDKDLDRAFRRYGRIEKIDVRMGFAFIEFDDRRDAEEAVSDMDGREIDGARIVVQPGRG------------HRPNGPKFATR-RTEHRITIEGLDSHTSWQDLKARPRQIFGTAHRDFGRQAGQVLFSDIFFRHGRRWGVVEYLTREDMKTAIRQLDDTRLGGKYIRVREERSGR 721
R++DL+R F+ YGRI +I ++ G+ F+EF+D RDA++AV +M+G+++ G R+ ++P RG R +F RT+HR+ +E L S SWQDLK D+ RQAG+V ++D R + GVVE+ T +MK AI+QLDDT L G+ IR++E+R GR
Sbjct: 16 RERDLERFFKGYGRITEILIKKGYGFVEFEDYRDADDAVYEMNGKKLLGERVTIEPARGTARGSGSRRDRERRGGRSRFGPPLRTKHRLIVENLSSRISWQDLK------------DYMRQAGEVTYADAH-RDRKNEGVVEFATASEMKAAIKQLDDTELNGRRIRLQEDRGGR 177
BLAST of mRNA_A-nodosum_M_contig103.12.2 vs. uniprot
Match: A0A401NNI1_SCYTO (Uncharacterized protein n=4 Tax=Scyliorhinus TaxID=7829 RepID=A0A401NNI1_SCYTO) HSP 1 Score: 127 bits (320), Expect = 1.780e-28 Identity = 83/226 (36.73%), Postives = 119/226 (52.65%), Query Frame = 2
Query: 104 WTPPRNWGGIP*VSTRFSLSMEMSSLTRDGMAEPVSRDKILRYTRDKDLDRAFRRYGRIEKIDVRMGFAFIEFDDRRDAEEAVSDMDGREIDGARIVVQPGR----GHRPNGPKFATR----------------RTEHRITIEGLDSHTSWQDLKARPRQIFGTAHRDFGRQAGQVLFSDIFFRHGRRWGVVEYLTREDMKTAIRQLDDTRLGGKYIRVREERSGR 721
W ++ GG +S S +MS+ G P Y +K+++R FR YGRI++ID++ GF F+EF+D RDAE+AV ++DG+E+ R+ V+ R G R G ++ R RTE+R+ +E L S SWQDLK DF RQAG+V F+D RH G+VE+ + D+K A+ +L T L G+ IRV EER R
Sbjct: 51 WGVKKDIGGGENRERLYSRSAKMSARVFIGRLSP--------YATEKNVERFFRGYGRIKEIDLKNGFGFVEFEDYRDAEDAVYELDGKELCNERVTVEHARARNRGGRGGGGRYQGRFSQSYQRSGGRNGPPVRTENRVIVENLSSRVSWQDLK------------DFMRQAGEVTFADAH-RHKMNEGIVEFASYSDVKNALEKLSGTELNGRKIRVVEERKQR 255
BLAST of mRNA_A-nodosum_M_contig103.12.2 vs. uniprot
Match: UPI00096B0064 (serine-arginine protein 55-like n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B0064) HSP 1 Score: 126 bits (316), Expect = 2.180e-28 Identity = 74/184 (40.22%), Postives = 112/184 (60.87%), Query Frame = 2
Query: 236 RDKDLDRAFRRYGRIEKIDVRMGFAFIEFDDRRDAEEAVSDMDGREIDGARIVVQPGRGH-------RPNG---------PKFATR-------RTEHRITIEGLDSHTSWQDLKARPRQIFGTAHRDFGRQAGQVLFSDIFFRHGRRWGVVEYLTREDMKTAIRQLDDTRLGGKYIRVREERSG 718
R++D+++ FR+YGRI+++ ++ GFAF+EFDD RDA++AV +++G+E+ G R+ V+ RG R NG P+ +R RTE+R+ +E L S SWQDLK D+ RQAG+V ++D + R GVVE+ + DMK AI +LDDT L G++I +RE+R G
Sbjct: 15 RERDIEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKELLGERVSVERARGTPRGSDQWRGNGGGGGRSYGPPRGRSRDKYGPPTRTEYRLIVENLSSRVSWQDLK------------DYMRQAGEVTYADAH-KQRRNEGVVEFASYSDMKNAIEKLDDTDLNGRHIHLREDRRG 185
BLAST of mRNA_A-nodosum_M_contig103.12.2 vs. uniprot
Match: UPI001602F692 (serine/arginine-rich splicing factor 4-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001602F692) HSP 1 Score: 124 bits (312), Expect = 4.460e-28 Identity = 70/178 (39.33%), Postives = 105/178 (58.99%), Query Frame = 2
Query: 236 RDKDLDRAFRRYGRIEKIDVRMGFAFIEFDDRRDAEEAVSDMDGREIDGARIVVQPGRG------------------HRPNGPKFATR-RTEHRITIEGLDSHTSWQDLKARPRQIFGTAHRDFGRQAGQVLFSDIFFRHGRRWGVVEYLTREDMKTAIRQLDDTRLGGKYIRVREER 712
R+KD++R FR YGRI +I+++ GF F+EFDD RDA++AV +++G+E+ G R+V++ RG R K+ RT++R+ +E L S SWQDLK DF RQAG+V + D +H + GVVE+ TR+DMK A+ LD + G+ I++RE+R
Sbjct: 15 REKDVERFFRGYGRIREINLKNGFGFVEFDDYRDADDAVYELNGKEVLGERVVIEHARGPTRRDYGYGGYYGGGHGRSRSGRDKYGPPIRTDYRVVVENLSSRVSWQDLK------------DFMRQAGEVTYGDAH-KHRKNEGVVEFRTRDDMKKALHTLDGAEINGRKIKLREDR 179
BLAST of mRNA_A-nodosum_M_contig103.12.2 vs. uniprot
Match: A0A2C9KFU7_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KFU7_BIOGL) HSP 1 Score: 124 bits (311), Expect = 4.720e-28 Identity = 73/193 (37.82%), Postives = 113/193 (58.55%), Query Frame = 2
Query: 194 MAEPVSRDKILRYTRDKDLDRAFRRYGRIEKIDVRMGFAFIEFDDRRDAEEAVSDMDGREIDGARIVVQPGRGH-RPNGPKFATR-------------RTEHRITIEGLDSHTSWQDLKARPRQIFGTAHRDFGRQAGQVLFSDIFFRHGRRWGVVEYLTREDMKTAIRQLDDTRLGGKYIRVREERSGRDSR 730
M V ++ + R+KD++R FR YGRI I ++ G+ F+EFDD RDA++AV +++G+E+ G R+V++ RG RP P +R RT+HR+ +E L S SWQDLK D+ RQAG+V ++D RH R G++E+ T D++ AI +LD T + G+ IR+ E++ + SR
Sbjct: 1 MGTRVYLGRLSYHAREKDIERFFRGYGRIRDIMLKNGYGFVEFDDYRDADDAVYELNGKELCGERVVIEHARGSGRP--PASRSRGSSAWLDKYGPPTRTDHRLIVENLSSRVSWQDLK------------DYMRQAGEVTYADAHKRH-RNEGIIEFATAADLRNAIEKLDGTEINGRKIRLIEDKVKKHSR 178
BLAST of mRNA_A-nodosum_M_contig103.12.2 vs. uniprot
Match: A0A1B6M680_9HEMI (Uncharacterized protein n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6M680_9HEMI) HSP 1 Score: 124 bits (310), Expect = 4.970e-28 Identity = 71/184 (38.59%), Postives = 107/184 (58.15%), Query Frame = 2
Query: 236 RDKDLDRAFRRYGRIEKIDVRMGFAFIEFDDRRDAEEAVSDMDGREIDGARIVVQPGRG-------------------------HRPNGPKFATRRTEHRITIEGLDSHTSWQDLKARPRQIFGTAHRDFGRQAGQVLFSDIFFRHGRRWGVVEYLTREDMKTAIRQLDDTRLGGKYIRVREER 712
R++DL+R FR+YGRI+++ ++ GFAF+EFDD RDA++AV +++G+E+ G R++V+ RG HR + RTE+R+ +E L + SWQDLK D+ RQAG+V ++D + R GVVE+ T DMK A+ +LDDT L G+ IR+ E+R
Sbjct: 15 RERDLERFFRKYGRIKEVAMKNGFAFVEFDDHRDADDAVYELNGKELLGERVIVELARGTARRSDRSFGGSSRRRSSWYGKEPDHRISDRYGPPTRTEYRLIVENLSTRVSWQDLK------------DYMRQAGEVTYADAH-KDRRNEGVVEFATSSDMKNALDKLDDTELNGRRIRLVEDR 185
BLAST of mRNA_A-nodosum_M_contig103.12.2 vs. uniprot
Match: A0A1S4EWT4_AEDAE (Arginine/serine-rich splicing factor n=2 Tax=Aedes aegypti TaxID=7159 RepID=A0A1S4EWT4_AEDAE) HSP 1 Score: 122 bits (307), Expect = 1.350e-27 Identity = 74/181 (40.88%), Postives = 104/181 (57.46%), Query Frame = 2
Query: 194 MAEPVSRDKILRYTRDKDLDRAFRRYGRIEKIDVRMGFAFIEFDDRRDAEEAVSDMDGREIDGARIVVQP--------GRGHRPNGPKFATRRTEHRITIEGLDSHTSWQDLKARPRQIFGTAHRDFGRQAGQVLFSDIFFRHGRRWGVVEYLTREDMKTAIRQLDDTRLGGKYIRVREER 712
M V K+ TR++DL+R F +GRI +I +R G+AF+EFDD RDAE+A+ +++G ++ G RIVV+ G RP P+ RT HR+ +E L S W++LKA R+ AG V F+D R GVVE+ +R DMK A++ DDT L G+YIR+ EER
Sbjct: 1 MGSRVYAGKLPHDTRERDLERFFEGFGRIREILLRRGYAFVEFDDYRDAEDAIYELNGAKLLGQRIVVEATKRPPRFGGASSRPKPPQ----RTYHRLIVENLSSRIDWRELKAHMRK------------AGSVTFADAH-RDRMNEGVVEFASRHDMKQALKMFDDTELNGRYIRLYEER 164
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FXG5 |
| Preferred name | NPL3 |
| PFAMs | RRM_1 |
| Model size | 2946 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K12893,ko:K12896,ko:K14651 |
| KEGG Pathway | ko03022,ko03040,ko05168,ko05202,map03022,map03040,map05168,map05202 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000122,GO:0000375,GO:0000377,GO:0000398,GO:0000993,GO:0001067,GO:0001069,GO:0001098,GO:0001099,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006412,GO:0006415,GO:0006417,GO:0006518,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008143,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0022411,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031369,GO:0031370,GO:0031503,GO:0031554,GO:0032268,GO:0032269,GO:0032784,GO:0032786,GO:0032968,GO:0032984,GO:0032991,GO:0033036,GO:0034243,GO:0034248,GO:0034249,GO:0034613,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0042886,GO:0043043,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043242,GO:0043244,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045184,GO:0045292,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051028,GO:0051128,GO:0051129,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051641,GO:0051649,GO:0060255,GO:0060567,GO:0065007,GO:0070063,GO:0070717,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1904594,GO:1990904,GO:2000112,GO:2000113,GO:2000804,GO:2000805,GO:2001141 |
| Exons | 9 |
| Evalue | 2.2e-92 |
| EggNOG OGs | COG0724@1|root,KOG0106@2759|Eukaryota |
| Ec32 ortholog description | SR RNA splicing protein |
| Ec32 ortholog | Ec-07_003150.1 |
| Description | RNA splicing |
| Cds size | 750 |
| COG category | J |
| BRITE | ko00000,ko00001,ko03019,ko03021,ko03041 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866394.1749854-UTR-A-nodosum_M_contig103:177193..178802 | 1680866394.1749854-UTR-A-nodosum_M_contig103:177193..178802 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig103 177194..178802 - |
| 1680866394.1865091-UTR-A-nodosum_M_contig103:179834..180258 | 1680866394.1865091-UTR-A-nodosum_M_contig103:179834..180258 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig103 179835..180258 - |
| 1680866394.2828224-UTR-A-nodosum_M_contig103:186732..186895 | 1680866394.2828224-UTR-A-nodosum_M_contig103:186732..186895 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig103 186733..186895 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866394.2027333-CDS-A-nodosum_M_contig103:180258..180286 | 1680866394.2027333-CDS-A-nodosum_M_contig103:180258..180286 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig103 180259..180286 - |
| 1680866394.2132657-CDS-A-nodosum_M_contig103:180940..181119 | 1680866394.2132657-CDS-A-nodosum_M_contig103:180940..181119 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig103 180941..181119 - |
| 1680866394.2215407-CDS-A-nodosum_M_contig103:181521..181616 | 1680866394.2215407-CDS-A-nodosum_M_contig103:181521..181616 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig103 181522..181616 - |
| 1680866394.229526-CDS-A-nodosum_M_contig103:182113..182180 | 1680866394.229526-CDS-A-nodosum_M_contig103:182113..182180 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig103 182114..182180 - |
| 1680866394.2376964-CDS-A-nodosum_M_contig103:182504..182692 | 1680866394.2376964-CDS-A-nodosum_M_contig103:182504..182692 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig103 182505..182692 - |
| 1680866394.2487414-CDS-A-nodosum_M_contig103:183511..183584 | 1680866394.2487414-CDS-A-nodosum_M_contig103:183511..183584 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig103 183512..183584 - |
| 1680866394.2628505-CDS-A-nodosum_M_contig103:184563..184618 | 1680866394.2628505-CDS-A-nodosum_M_contig103:184563..184618 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig103 184564..184618 - |
| 1680866394.2734516-CDS-A-nodosum_M_contig103:186667..186732 | 1680866394.2734516-CDS-A-nodosum_M_contig103:186667..186732 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig103 186668..186732 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig103.12.2 >prot_A-nodosum_M_contig103.12.2 ID=prot_A-nodosum_M_contig103.12.2|Name=mRNA_A-nodosum_M_contig103.12.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=250bp
MEMSSLTRDGMAEPVSRDKILRYTRDKDLDRAFRRYGRIEKIDVRMGFAF IEFDDRRDAEEAVSDMDGREIDGARIVVQPGRGHRPNGPKFATRRTEHRI TIEGLDSHTSWQDLKARPRQIFGTAHRDFGRQAGQVLFSDIFFRHGRRWG VVEYLTREDMKTAIRQLDDTRLGGKYIRVREERSGRDSRSRSRSRRRSRT DSRSPSRRHRSPTPDDRGRGKGRGRDRGNSRSRSRSPARHSRSRSRHSG* back to topmRNA from alignment at A-nodosum_M_contig103:177194..186895- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig103.12.2 ID=mRNA_A-nodosum_M_contig103.12.2|Name=mRNA_A-nodosum_M_contig103.12.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9702bp|location=Sequence derived from alignment at A-nodosum_M_contig103:177194..186895- (Ascophyllum nodosum dioecious) TGGCCCTGTGCCGGCGGACTCTCGGCAGTGCACGCCATCGGTACGCAATT
GCGTGACCCGATAAACTCGGGACTGACCCGGTGGCGTATGGCGGTTTCAT
AAATGGACGCCGCCGCGGAACTGGGGAGGAATCCCGTAAGTAAGCACCAG
ATTCAGCCTGAGTATGGAGATGAGCAGCCTGACGCGGGACGGAATGGCTG
AACCCGTCTCGCGAGATAAAATTCTCAGGTACGCACGGGGACATGGGACT
ATTCATTTTCCCTCTTCAGCTGACCACGAGCAGGATTGGCAATCATACCC
GGTTGATCCATACTCTGCTATATGTGATGACCATACATCCATACATACGT
ACATACTACACCTACATTAATCGCCATGCAGGGACACCAAAAACAAACTA
CCACAACCAAAACCATTTTTTCCCCTGAAGGCGGATGCTCAGAAGGTTTA
GATGCGTTCAGATTTTTTTTTTAAACCATCCAAAAACAATGTAGTACGTA
ATTAGGTAGGTTGTTCTATACTGAAGTATAATTTATCAGTGTACAGTAGT
ACAATACAGTACAGTAGTATCATAGTATTAATAATAATATTCATTAGTAC
ACGATAACAAGTGTCATCGAATACTACCACAACACACTGTGAGCTACTTT
ATAGTATAGTGCATGAGGATTGGCAACAATGTCACATTTTCGTCTTACTG
CTGTAGACCTACTGCTCCAGTGCTGTTACAATGCTGCAATGCTGAACCCC
AAAGGTAAACTGGTGTTCGGATGCTTAAGAGGGTCTACTCTACAGCAGTC
TGGTGTTAACTCTACTTTTTGCTGTATGTTGCTACAGTATACCAGGTATT
TCATAGACAGTTAGTTCAGACAGTTTTGTATTTTCATAAATTGTTCTGGA
CGACAATACTAAATAACTATTAATAGGTATCTTAGATCTAAGTGGCGTTG
TAAACCGAACTTAAACGTTTCTAAAGTGTAATTTGTAACTCAGATTCTAA
AACACTGGCAGCACTCCCAGTAGAAGCTGTAGTTAGTACACAAATATACG
GTATCGTGTTGAAAGAAAATCTGAACGCATCTAGACCTTCTGAGCATTCT
TCAATCAGGGTTAGAAATAAGTTTCCGATGTTCTCGGGTGGTTGAATCTG
AGAAGGGTTTTGTGGCGACTTGGATCTCTGTTGGTTTGAGTTGCGGCCTA
ATTTTCACCATGATTGTGAACCGTTGACCTTCGTAGTTCTTTGTGACCAT
AAACGGGACTGGTGCTTGATGCGCCGGTACTTTCAACATGCCTGTCCACT
TCATACCAATAATGAGTGTGGGAAAGAGAGGCGCGTATTAATTGGTCCAT
GGTGACCTGCCAAGGCAGCACTCGTTCGGAACTACCTTGAGGTTTACTGG
CCCTGTGTCGGCGGACTCTCGGCAGTGAGTGCCAGATTCAGCCTGAGTAT
GGAGATGAGCAGGCTGACGCGGGACGGGACTGCCAAAGCCGTTTCGCGAG
ACCAAATTCCCAGGCGCGAACGAGGACAGGGAAGTATTCATGTTCCCTGT
TCAGCTGACCACGAGCAGGATTGGCAACCTTACGCGGTTGATCCTTACTC
TTGCTATATGTATGACCATGCATGTATGCTAACACGATGAGAAAATATCG
ATACACGTACTGTACATTATACTATTAATAGTAAGGCACGGGCGGGACAA
AAAAAAATGATGCAGTCCGTTCTCTCGCCTGGCGTACATTCCTTGAAAGC
TTTTTTTCTCGAGTGTCGGGCGTCGACGGTGTGCCACGGGACTGTCGCCT
CGCCATGAATCGGCCACTGCGACCCCCTATGTTCTTGGGTGGTTCGCCGC
ACAGCAAGCCTCTGAACCAGCTGTCGTATGCTTCCCGAGACGTTTGACTT
TTGTCACACCAGCTCGCCTCAGTGGGGTCCCGGAAATGTTGCTGCATCTG
AGCACTACAGACGGCTTCTACAGACGGCTTCTCGAGCCCCTAATTTATAC
TATTAATACTATAGTTCTAGTCTAACTACAGAATATGAAGATTACGCGCG
AGCCCTCAAGGCTGGTACTGTAACGCTGTTGCTAATACCTATAGCTCTAT
ATAGTTCGACATGTGGAGACATCTGTTCGGTAACGTAGCGTACGTGTAAT
GTTTTCTTACCGAATCTGTCGCGAAGGGTGATTGATGAATCCGTTCGATC
CTCTCCCCCCCCGTCTCCGGCTTCCACGGTGAATCATGAATCATGAATCA
TTACCCGACATCCTTACGAACGTTAAGGTACACTCGCGACAAGGACTTGG
ACCGAGCATTCAGAAGATATGGACGAATCGAGGTGAGAGCGGGTGCTTCG
CCATGCTAGCCTGGACGACAAGACGTCCACGCCATGTCCCCCTTGTGCCA
AGAAATATTCGTTTTTCTCCCTCAATCGCGCAGAGTAAATACAGTACTAC
AATAGAGCAATGTTTACACATTCCCGGTTTTGCATGCACTAAGCTAATCT
AATTTATTGGCCTTTTCAGTTTTACCGGTTTTGCCAAAATTTTCTTCGAC
TTGGCCGACCTGTGGGGAAAACAGTGCACCAGGTATGAGACAACGCCGCT
CTAGCGATGAATCGTTCGACGAACCGATGTATGCGGCACCCTCCAGCCAT
CTCTTGCTCAAGTCGGGAAAAATATCACCCATTTCCTACCTACAACCCGG
CGAAAGCAATATCCTCGACTGGAACTCCCTCGGTTGATGAGAGGGGCGCC
AAATCCGCTTCTCGTAACAATTTGATGCTTTATCGTTTATCTTATTATTT
TGTTATTGATGCAGTTTTTTTTTTAATATTTAAAATATCCCTCTCCATGA
TGTCCTTCATTTTTTTCTTTTGCAAGTCTAACTTCCTTTAGTTTTGATGT
TATTTTTCTCGTTTTCAGGCGTTGTCATTATTTTTAGTACGCATGTGTTC
GAGGCATTGAAAATATCGATAGTAGTACAACCGTACATATTTATAGCAGC
AGCACCGTAATATAGCGGCTCTCACGGTTACGCCGCATCTGCTTTATTGA
CGCTTTATTTATATTATATTTGTATTGATGTCCGCCGAAATTTGCTTGTT
TTCTGGTTGTGTATATGTGTGTGAGAGAGAGAGCGTGCGTGTGTGTGTAT
TTTTTTTGCCGTTGTTTTTTATCATTGTTTATTTTATTTTATTTTAGCCG
TTGATTTTTTGCCACTCACTTTTTTTTGTCTTTAGTTTTTATGTTTTTTT
TTGTTATCGTTGGTTTTTCATCATCTGTTTTTGTTTTTGTTGGCCGTGTC
GCTTTCATCAGAAAATCGATGTGAGAATGGGGTTCGCTTTCATCGAGTTT
GACGATAGGCGGGACGCTGAAGAAGCTGTATCCGGTGAGTGATGTATCAG
CAAAAGGGAGGCAGTCACTTGGGCAAGCATGGTACACTGGTCGCGTTGCC
CGTCATGTGGCACTCGAGCGGATATATTATACTGGAGTATCATCGAACGC
AAACATTAAAAATAAATGAAACTGTATTGGGGACTGTAGTGGTACACTGC
AGTGGGGTTATTACAGAAGACGTAGAAGCGAGATCTGGGTTTTCTCCGTT
TTTTCATGTTTTCGCCCTTTTTTCAAAATATATACCAGGTACATTTTATA
AGACGTCGAAGCGAGATTTTGGTCGCCCCCGTTTTTTTTTCCGTTTTCGC
CCCTTTTTTTATGTTATCAGAAATTGAAAATATTTTGCGCTTATCTTGTT
GCTGCTCTACTTCCGCGATAACCGTTATGTACAAGCAGTGGTTGTGGATA
TAACACCCTCCGCCTCCGGGGATACGACGAAAGCTTCCCTTTTTTTCTGT
AATTGAGTTTGATTCTCAGTATATATACTCCGGAGTATATAATAGAAACA
TACATGTAGCGTGACCAAACTTTCGTAGTTTTTTTTTTTTCATGTTCACA
AATACTATTCGTACTGCAGCTTTGTCTGACAGTTTGTTAAGGGAAACGAT
GACCATGGAATATCCCCTGGATCATTGGATTAGCGTTTTAGGCCCACAAC
CCTTCACGCTCGTCAGAGACGCCTCCTGTCCTTGTGGGAAAAACGTAACA
TCAAATCAAATTCAGAGCACGAACAGTCGTGCGTGCGACCACAGACTTTA
AAGACGTTGGCGCATGTGTTTTAAACGCTTCTCTTCGATCGCGGATACTG
TAGATATGGACGGACGTGAAATCGACGGAGCCCGCATCGTGGTTCAGCCC
GGTCGAGGGCACCGGCCCAACGGCCCCAAGTTTGCCACCCGCCGCACGGA
GCACCGCATCACCATCGAAGGACTCGACTCGCACACCAGCTGGCAGGACC
TCAAGGCGCGCCCGCGACAAATATTTGGAACAGCTCATCGCGTGCATTAT
AGAGTGCCTTAAGGGTGTCTCACCACGTTCGGTGTTGCTGTTTGGCCGTT
TTTTTTTGCATTTACCTTACCCTGCTGATGGCGTCCAGAGAGGACTTCTA
GTGGGGGCGTTTGCCGTGCGCGGGAGCCGTGTTGAGTCGGTCTTTCAGTG
TCCGCGCCTAAGCGAAAGTTAAAAAGAGAATCTCTTTCGGCCTGTAGGTC
CTCCTCCATCTCTCCCCCCCCCCTCATCAAAAACGCCTGTATTCTCTGTA
ACCCCTCTGTAACATCTTTCACCGCGTTGGGTTTTCCCTTGTTGCACCGA
TCGTTCTTCATACAGGATTTCGGTCGCCAGGCAGGACAGGTGCTGTTCAG
CGATATCTTCTTCCGCCACGGCCGCCGCTGGGGTGAGCGACACCGTATCG
CCTGTCGTATTTACTACCGCGCAGCGTTTTCGCCTAGGTTTTCTCTTACT
TGGCGTTCTTCCAGCCCTCTTTTTGTCTTGTCTTGCCGTGTGTTTATGCA
CACTGCATTCCTTTTAGAGGTGCACCTTTACATAACGCCTCCTCGTGCAG
GCTGCAGCGGATTGCGCGCTGCCTTTGGCTACACGTCACGATCCTGCGCT
TTGCATTCTGACTTATCATTGAACAACGGCCGCTTTCTACTGATCTCTCT
TGTTTCGATCGTGTACGCGCCCCGCCGTCGATGGCGCGGGTCGGGCGCAA
ATCGCGAATTGAGTGCAGACGGTGGCCTTTCCCGTCCTGGAACGATCGCT
GTTGCTCCTAACGAGAAACTCACCCTGCTGTGTTCCCAACTAGTGCCCTG
AAAATTTTGACGCGATCTCTGTGTAGTATCAAGAATCCCTATGCCCCTTT
TGTGCGGCGCGCTTTTCAACGCCTCCCAGGAGTGGTGGAGTACCTGACTC
GTGAGGATATGAAAACGGCGATCCGACAGCTGGACGACACCCGTCTAGGT
GGAAAGTATATCCGCGTGAGAGAGGTGCGAGGCTACCGGCGGATCTGTGG
GGGGCGCCAGACGCATGCGCGCTTGTGTGATGTGGCTGTTTATTCCAAGC
GCAAATGCGCGCGCCTATGACGTTGCAATGCTTCGCGGCGGTTTCGGCCG
GCATGATGGGGGACTGTGAGCCTTTGCTGCAGAGGCAGCAGTCGCTAGAG
TGACGTCGTTGGGACATCATACCTTATTTCGGGAGGACATCGTGTACCTT
ATTTTGGTATTGTGTTGAAAAGTAGGTTTGTTGACACCGCATGGTTCCAC
TTTTTTTTTGTCCTAAGAGCGCGTCTTGGTTCTGTTTTTAACCCGCTGCT
CTGAAAAATAACGCCACATTGCCTCCACTCCCTAACTTATCTCACGTCAT
CTCACGTGGGTTTGCATTACTTGCAGGAGCGCAGCGGGCGGGACAGCCGT
TCGCGCAGCCGCTCTCGCCGTCGTTCCCGCACCGATTCCCGGTCCCCGTC
CCGCCGGCACCGCTCTCCGACTCCGGATGACAGGGGCAGGGGGAAAGGAA
GAGGGCGTGACCGTGGCAACAGCCGCAGCCGCAGTCGCTCGCCCGCCCGG
CACAGGTACGTTTCGTTTCCGATGGTGCAATAAGTGGTCTGTCCCGCGAT
GGGATGCCGTTGTTTGCCTTGCCTTGCGGGGGCGGCACTTCTACTATGGA
GTGTGTGTACGCTGTACATTATGTTCGTCAGTACGATTGTGCTAGATTGA
TGATTTCATCTGTGTTTCGGCAGGTTGTGACGGGGGGCAGCTTATGAGAA
GGGTTTCCTATAACATTGGCTCGGGTGGCCGGAAACGGGTTTTCTCGTGG
CATGTCATGGCTACCGAGTCTGTGTGTTATTTGGGTGAAAAATCAATGTG
CAAATCCCATCGACCGGGCACTCTTGTCCTGTAGCGGTTGTGCGTTAGAA
CCCCGAATGTTATTGTTTATCTCACATCATCTGATCCGATACGAATCCAG
CCGTGGTCGTAAGATAGACGGAAACCAAACCAAATCAAACCGAGAATACG
TTCGGAGATATGCGGATGAAGAAAATGTGAACCAACGTATTTAAACCTCT
TGAGCATTCACCCAATCAGGGGGGGAAAACGACAAAACTGTGTAGTGGCG
GGTGTCCTGTCCTACCCTGTCCTCTCTATCTTAATGACGCCTTTTCCCGC
CTTTTGTGCTCCCATCCCATTCTTCCAACCCTGCAACCGTCTCGTTTACC
CCAACACAGCCGCAGCCGCAGCAGGCACTCGGGCTGAGATACCCCACAGC
AGCAGCTTCCTCTCGAGGAGCAGTCATGCACACGGCTCCTTTGGAACTGA
GGGGTCACTCTCCATCACCGGATGGAAGTTTCTTTTTCTATCGTCCCGTG
AACTGAGGGGTCACTCTCCATCACCGGATGGAAGTTTCTTTTTCTATCGT
CCCGTGAAGGCAAAGGACATGTCGCCCTTGCAACGACTCCAAACCCCCCT
CCCCCTCCCCCCCCCCCTGAAGCAGTAACGCGTTTCAAGCCCTGTCATAC
TGGACTCCGTGGAGCAAGATGCTTTCCAATTGTGGCAAAGATTACGAAGA
GGGAATAATGACCTAACTCTAGAGTACTATCTAGGACAGGGCGGACGGAA
CTCGACGAGACGGAACGGAACGGAACGGAACGGAACGTCAGCGTGGATGG
GGCTCCGAGGCGTGAGTGATCGGGGCTCTGCTTCTGTTTTTTGTTTTCGT
TTGCTTGTGGTATGTTTTTTTTTTTTTCTTGGTGCGAAGTGTTGTACGAA
GGAGTTCTCTACTTGCGGCCCACAGGTGGGCGGGGACCCCACCCCCCCTA
TCCCCCCCTCCGGGATCGGGCCGCTAGTTTCTCCCCACGGATTGGGAAAA
GATGGAGCTGGTTTGTCTGGGGGCTCCGTTCGACACCAGCACCGAGGCAG
GAGGCAGGATCGATACGAAGGTCGGGCCTTGGGGAACCGAGGGGCCGATG
ACACCTGACATGACAGCGTGGCCGTGATGGGGAGTATTGAGCTGGTGGGC
AGAATTTGTCTCGATTCATTTTTTGGGGACAGCTGGCGAGGGGCATGATC
AAAACAAACCCCGTCGCGAGAGGAATGTGCCAAGACAATGTATTGCTAAT
GTACTAATGTAGGTATGGTAAATGTTCATAGGCTTGACTTGAGATCAACG
GAAGGTGCTCGTAATGACCTAATCCCTTTTTTTCTTCCTCTGTGTGGCTG
TATGCATTACGCAATATAAACTACACTACTCCGGACGTTCGAAAAAACTT
CTCGCTCTCTCTCGCTTCTGCGCAATGACCCCCCCCCGGCGGTTGTTCAG
GACGCGCGTAGAGCTCGCGAAAGCCAGTTTCTATCATTTTCATGCACTAC
TTACTGCTCATGTTGAAGTTGCGACAATAATTATCTTTTTGAGCACTTGA
AGACAAAGGCAGGTAGGTATATTGGTTGCACTGTACCGTGTCCCGGTCGG
GAGGACACTCAAGCGTGCGTTCTGTTCCAGCCCTCTATACCTTTTATATT
GTATGTGTGTGGGGAAGACTGTCCGGCTCCCCGAGGCCCTTCTCTATCTT
AACCCACATCGCATGGCTGGAGAAACTAGAATTGCGCCTGGCGTACACCT
GTGCTTCTCGACCTGTGACCTGTGATGGGAGAACTGACTTTAACTGTAAC
TGTAACTGTGTCTTTCGGTCTGTATTCCGGTGGTCGATGTCAGTGTCAAT
GTCAATGTCTGGGGAGGGACAAGTACACGATTACGATCACGTGATGACTG
GTCTGGCCTGGTTTTGATGATCTGGACCGGAACGAATGACTCTTCAAATT
CTGGAGGGTGATGAACTTCATGGTCGGGCGGCGATCTGGTCTTTTCTGTG
GTCTGTGGCCTTGTCTGGTCTGTGGTCTGGTCTGGAGGACTGGTCTGGTC
TGGTGATCTGTGGCCTGCGTCCGGTGGCGCATTTCTGGGAATTCCCTGGG
TCGAATCAGAAGAACGTGACTGGGAAACTGGCACCGGAAATTTGAGGTAT
ACCAGCCATGACATGGATCTAGAACTGGCAAAAAGAACAAAAGGCTTACA
GCGTTCAGAAACTCGCGGCAGTCTTTTACTCGAGTACCCGATCGGGCCAC
TGTTTTTTTCGATGCGTTTAGTTTCCCGCATCTAGCGGAACATGCTGCCG
TGTCTCTCGGGACCGTTTGTAGTTAGTTCCTCCTGCGGTCGTAAAACCGA
CTTGATCCAACTACCATTAACTGCCCGACAGCCTCGCGAACTATTTTTTC
TTGAGTATGTACTGTTGCGCGTGACACAAAAAACCACTTGAACGTTGTAT
CGAGACGGGCAATCGTTGTTGTTTTGAACGTGATGTTGGAAACATGCATG
AAGTTCTATCTTGCATATTGCTTTTATCGAATAGGAACAAATATGGAGTC
GTTGGATAGTATTTTTAGATATGATTGGCTATCATGTATTGTTACTGATC
CTGAGTCCTCGTCGGTCTACAAATGAAAAGGGTCTTCGATCCGTCCTGCC
CGCGGTTTTCTGTTTCTACTGCTTGTTCCTCAAAGCGTACTGGAACGTGA
AGACGCGCAATTCAGCCGCAACAATCTCCAGCTTCGCTTTTCTTAGGAAT
GCCGGATTCTGTCAATCGCTGCTACCCAATCGTGTTCGTCCCAGCGTTCC
GTCCACCTTACGATTGATTGATTTCATTGACTCATTTCTTCGTTCGCAAT
GCTGATACCGCCACTGTTACTCACTTGTTAACAGTGTACCGTTTGTACAG
GTTTATCCCGTGGCTTCATCATTTTCCTCGTTTTCCATGTAAATAGTAAT
TATTAATAGAGGCTACATAGTGGATAGCAGCAGGGAGCTGGTATTTCTAT
TTTCACAAAAACTCTCTGTTCAACCTCGACTCGCTCAATTCTTCTTTCAA
GAAGAGCATGTTATAATAATTACTAAGGAGTGTTGAGTGCGTAACAAAAT
TATGTTTCAGCAAGTGACATGTGTTTTATTGCTTGTTTAGGTTGGGATTC
ATGCCAAGCCTGCCTCTTTTTTAACTGTTACATTGACTGTGATCTTAAAG
GTTTGGACTGTTGACGGGCAAGCCTTGTCACGGTCGATGTCGAGAGGTAC
GCTGTCTTGATTCGATCAAATAATAGTTGTGAAGGGGTGTTAAAAGAAAA
ATCTGAGCGCATCTAGGCCTTGTGCGCATCCCCCAGTCAATGGGAAAAAT
ATCAACGTTTAGGTGGGATAATAGGCTGCTAAGACAAAACCTCTTCTAGC
GTATAAACGGGCCGCGCCTATTTACCACACATGGGTGATTTTGTCGAGCC
AC back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig103:177194..186895- >mRNA_A-nodosum_M_contig103.12.2 ID=mRNA_A-nodosum_M_contig103.12.2|Name=mRNA_A-nodosum_M_contig103.12.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=750bp|location=Sequence derived from alignment at A-nodosum_M_contig103:177194..186895- (Ascophyllum nodosum dioecious) ATGGAGATGAGCAGCCTGACGCGGGACGGAATGGCTGAACCCGTCTCGCG AGATAAAATTCTCAGGTACACTCGCGACAAGGACTTGGACCGAGCATTCA GAAGATATGGACGAATCGAGAAAATCGATGTGAGAATGGGGTTCGCTTTC ATCGAGTTTGACGATAGGCGGGACGCTGAAGAAGCTGTATCCGATATGGA CGGACGTGAAATCGACGGAGCCCGCATCGTGGTTCAGCCCGGTCGAGGGC ACCGGCCCAACGGCCCCAAGTTTGCCACCCGCCGCACGGAGCACCGCATC ACCATCGAAGGACTCGACTCGCACACCAGCTGGCAGGACCTCAAGGCGCG CCCGCGACAAATATTTGGAACAGCTCATCGCGATTTCGGTCGCCAGGCAG GACAGGTGCTGTTCAGCGATATCTTCTTCCGCCACGGCCGCCGCTGGGGA GTGGTGGAGTACCTGACTCGTGAGGATATGAAAACGGCGATCCGACAGCT GGACGACACCCGTCTAGGTGGAAAGTATATCCGCGTGAGAGAGGAGCGCA GCGGGCGGGACAGCCGTTCGCGCAGCCGCTCTCGCCGTCGTTCCCGCACC GATTCCCGGTCCCCGTCCCGCCGGCACCGCTCTCCGACTCCGGATGACAG GGGCAGGGGGAAAGGAAGAGGGCGTGACCGTGGCAACAGCCGCAGCCGCA GTCGCTCGCCCGCCCGGCACAGCCGCAGCCGCAGCAGGCACTCGGGCTGA back to top
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