mRNA_A-nodosum_M_contig10278.5.2 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10278.5.2 vs. uniprot
Match: A0A835YQ71_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ71_9STRA) HSP 1 Score: 164 bits (415), Expect = 6.770e-46 Identity = 78/120 (65.00%), Postives = 95/120 (79.17%), Query Frame = 3 Query: 3 AENMIRFRELYGSMPLVVVPRVLLKYSGQRVITSEWIDGEKLVNAQAQVSPADLPTLRVGIDCTLTQLLDKGFLHADPHGGNLLKMADEKLAYLDFGLVSTIPPGVMDALICATLHVMNR 362 A NM +F+ LYG + + +P+V ++S +RVIT+EWIDG K+VN +A+VSP DL L+VGI CTL QLLDKGFLHADPHGGNLLK KLAYLDFGLVS IP VMD +ICAT+H+MNR Sbjct: 253 ARNMRKFQRLYGHLDGIYIPQVYEEFSARRVITTEWIDGTKVVNERAKVSPNDLALLQVGIQCTLMQLLDKGFLHADPHGGNLLKTPSGKLAYLDFGLVSDIPASVMDTIICATVHLMNR 372
BLAST of mRNA_A-nodosum_M_contig10278.5.2 vs. uniprot
Match: A9BL31_HEMAN (Kin(ABC1) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BL31_HEMAN) HSP 1 Score: 137 bits (344), Expect = 4.750e-35 Identity = 62/120 (51.67%), Postives = 86/120 (71.67%), Query Frame = 3 Query: 3 AENMIRFRELYGSMPLVVVPRVLLKYSGQRVITSEWIDGEKLVNAQAQVSPADLPTLRVGIDCTLTQLLDKGFLHADPHGGNLLKMADEKLAYLDFGLVSTIPPGVMDALICATLHVMNR 362 + NMI+FR LYG M ++ +PRV L+YS + V+ EWI+G++LV A+ D+ + +G+ C+L QLL+ GFLH DPHGGNL+K D KLAYLDFGLVS IP + +LI A L+++NR Sbjct: 456 SSNMIKFRSLYGYMEMLYIPRVFLEYSSKHVLVMEWIEGDRLVKNSAKAMQEDVSLIEIGVRCSLVQLLETGFLHCDPHGGNLIKTKDGKLAYLDFGLVSEIPETIRYSLISAILNLINR 575
BLAST of mRNA_A-nodosum_M_contig10278.5.2 vs. uniprot
Match: A0A7S2ZE39_9RHOD (Hypothetical protein n=8 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZE39_9RHOD) HSP 1 Score: 134 bits (338), Expect = 3.120e-34 Identity = 60/120 (50.00%), Postives = 85/120 (70.83%), Query Frame = 3 Query: 3 AENMIRFRELYGSMPLVVVPRVLLKYSGQRVITSEWIDGEKLVNAQAQVSPADLPTLRVGIDCTLTQLLDKGFLHADPHGGNLLKMADEKLAYLDFGLVSTIPPGVMDALICATLHVMNR 362 ++NM +F+ LYG++ + VP+V KYS V+T EW++G++L+ A V D+P + GI C LTQ+LD GFLHADPH GNL++ D +LAYLDFGL+STIP V D+ + LH++NR Sbjct: 389 SKNMAQFKLLYGNIKGIYVPKVFTKYSTAHVLTMEWVEGQRLITDSASVKLQDVPLVEAGIRCCLTQMLDVGFLHADPHAGNLIRTRDGQLAYLDFGLMSTIPDNVRDSFLITILHLINR 508
BLAST of mRNA_A-nodosum_M_contig10278.5.2 vs. uniprot
Match: A0A7J7IQA4_9RHOD (Protein kinase domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQA4_9RHOD) HSP 1 Score: 132 bits (332), Expect = 2.030e-33 Identity = 61/121 (50.41%), Postives = 87/121 (71.90%), Query Frame = 3 Query: 3 AENMIRFRELYGSMPLVVVPRVLLKYSGQRVITSEWIDGEKLVNAQAQVSPADLPTLRVGIDCTLTQLLDKGFLHADPHGGNLLKMAD-EKLAYLDFGLVSTIPPGVMDALICATLHVMNR 362 AENM RFR+LYGS+P + VP V +YS V+T EW++G +L++ A V D+P +++GI C+L QL++ GFLHADPH GNLL D +L YLD+GL+S +P V ++ICA +H++NR Sbjct: 398 AENMRRFRQLYGSLPGIYVPEVYPEYSSAHVLTMEWVNGRRLIDETATVRRDDIPLIKLGILCSLMQLMETGFLHADPHTGNLLVTEDGSRLVYLDYGLMSEVPQSVQLSIICAVVHLINR 518
BLAST of mRNA_A-nodosum_M_contig10278.5.2 vs. uniprot
Match: M2XY29_GALSU (AarF domain-containing kinase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XY29_GALSU) HSP 1 Score: 132 bits (331), Expect = 2.720e-33 Identity = 59/118 (50.00%), Postives = 84/118 (71.19%), Query Frame = 3 Query: 3 AENMIRFRELYGSMPLVVVPRVLLKYSGQRVITSEWIDGEKLVNAQAQVSPADLPTLRVGIDCTLTQLLDKGFLHADPHGGNLLKMADEKLAYLDFGLVSTIPPGVMDALICATLHVM 356 + NMIRF++LYG +P + +P V +YS +R++ EWIDG+K+VN + D + +GI +L QLL+ GFLHADPHGGNL++M D +LAYLDFGLVS +P +M ++IC H+M Sbjct: 444 SSNMIRFQKLYGDIPGIYIPSVFQEYSTRRILVMEWIDGQKIVNEGNFIRKEDAALVEIGIQFSLKQLLETGFLHADPHGGNLVRMKDGRLAYLDFGLVSHVPEAMMYSMICTFFHLM 561
BLAST of mRNA_A-nodosum_M_contig10278.5.2 vs. uniprot
Match: M1UVS6_CYAM1 (Protein kinase domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UVS6_CYAM1) HSP 1 Score: 132 bits (331), Expect = 2.790e-33 Identity = 61/121 (50.41%), Postives = 88/121 (72.73%), Query Frame = 3 Query: 3 AENMIRFRELYGSMPLVVVPRVLLKYSGQRVITSEWIDGEKLVNAQAQVSPADLPTLRVGIDCTLTQLLDKGFLHADPHGGNLLKMAD-EKLAYLDFGLVSTIPPGVMDALICATLHVMNR 362 A+NM RFR+LYGS+P + VP V +YS V+T EW++G +L++ A V D+P +++GI C+L QL++ GFLHADPH GNLL D +LAYLD+GL+S +P V ++ICA +H++NR Sbjct: 639 AKNMHRFRQLYGSLPGIYVPEVYPEYSSAHVLTMEWVNGRRLIDDTATVRREDIPLIKLGILCSLMQLMEAGFLHADPHTGNLLVTEDGTRLAYLDYGLMSEVPQSVQLSIICAVVHLINR 759
BLAST of mRNA_A-nodosum_M_contig10278.5.2 vs. uniprot
Match: D7FNM6_ECTSI (ABC transporter-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM6_ECTSI) HSP 1 Score: 127 bits (320), Expect = 3.930e-33 Identity = 67/101 (66.34%), Postives = 81/101 (80.20%), Query Frame = 3 Query: 3 AENMIRFRELYGSMPLVVVPRVLLKYSGQRVITSEWIDGEKLVNAQAQVSPADLPTLRVGIDCTLTQLLDKGFLHADPHGGNLLKMADEKLAYLDFGLVST 305 A+NM++FRELY +MP ++VP+VLL YS +RVITSEWIDGEKLV+ QAQVSPADLP LRVGI+CTLTQLLDKGFLHA L++ D++ Y G VST Sbjct: 259 AQNMVQFRELYHAMPGILVPKVLLDYSAKRVITSEWIDGEKLVDNQAQVSPADLPILRVGIECTLTQLLDKGFLHAQD-----LEVKDKERTY---GRVST 351
BLAST of mRNA_A-nodosum_M_contig10278.5.2 vs. uniprot
Match: J7G6I5_9CRYP (ABC1 family protein n=1 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7G6I5_9CRYP) HSP 1 Score: 130 bits (327), Expect = 9.400e-33 Identity = 58/120 (48.33%), Postives = 84/120 (70.00%), Query Frame = 3 Query: 3 AENMIRFRELYGSMPLVVVPRVLLKYSGQRVITSEWIDGEKLVNAQAQVSPADLPTLRVGIDCTLTQLLDKGFLHADPHGGNLLKMADEKLAYLDFGLVSTIPPGVMDALICATLHVMNR 362 + NMI+FR LYG M ++ +PRV ++YS + V+ EW++GE+LV + D+ + +G+ C+L QLL+ GFLH DPHGGNL+K + +LAYLDFGLVS IP V + I A L+++NR Sbjct: 462 SSNMIKFRSLYGYMDMIYIPRVFVEYSSKHVLVMEWVEGERLVKHSVKSMQEDVSLIEIGVRCSLVQLLETGFLHCDPHGGNLVKTKNGRLAYLDFGLVSEIPETVRFSFISAILNLINR 581
BLAST of mRNA_A-nodosum_M_contig10278.5.2 vs. uniprot
Match: A0A7S0PNH3_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PNH3_9CHLO) HSP 1 Score: 128 bits (321), Expect = 2.200e-32 Identity = 71/132 (53.79%), Postives = 91/132 (68.94%), Query Frame = 3 Query: 3 AENMIRFRELYGS---------MPLVVVPRVLLKYS-GQRVITSEWIDGEKLVNAQAQ-VSPADLPTLRVGIDCTLTQLLDKGFLHADPHGGNLLKMADEKLAYLDFGLVSTIPPGVMDALICA-TLHVMNR 362 A N+++F ELYG P VVVPR++ KY G+RVI EWIDGEKL + + VS DL +++GI CTL+QL++ GF+HADPHGGNLLK+AD LAYLDFGLVST+P V D L+ A L + +R Sbjct: 180 ARNLVKFAELYGKGGSAAKSLPPPGVVVPRLIDKYGVGRRVIVMEWIDGEKLTAGKNRAVSTDDLKYVKLGIMCTLSQLIETGFMHADPHGGNLLKLADGGLAYLDFGLVSTVPQQVRDGLVAAIALLIFSR 311
BLAST of mRNA_A-nodosum_M_contig10278.5.2 vs. uniprot
Match: A0A6T6CQ29_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CQ29_9RHOD) HSP 1 Score: 128 bits (322), Expect = 3.790e-32 Identity = 58/118 (49.15%), Postives = 81/118 (68.64%), Query Frame = 3 Query: 9 NMIRFRELYGSMPLVVVPRVLLKYSGQRVITSEWIDGEKLVNAQAQVSPADLPTLRVGIDCTLTQLLDKGFLHADPHGGNLLKMADEKLAYLDFGLVSTIPPGVMDALICATLHVMNR 362 N+ +FR LYG M + VP+V +Y+ V+ EW+ GEKL + A + D+ + +GI C+LTQLL+KGFLHADPH GNLL+ D +LAY+DFG VS +P VM ++ A LH++NR Sbjct: 226 NIAKFRNLYGGMKRIYVPQVFQEYTTTHVLVMEWVVGEKLFDENAGIRKDDIELVELGIACSLTQLLEKGFLHADPHAGNLLRTNDGRLAYIDFGAVSVVPESVMQCILRAILHLVNR 343 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10278.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10278.5.2 >prot_A-nodosum_M_contig10278.5.2 ID=prot_A-nodosum_M_contig10278.5.2|Name=mRNA_A-nodosum_M_contig10278.5.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=117bp MIRFRELYGSMPLVVVPRVLLKYSGQRVITSEWIDGEKLVNAQAQVSPADback to top mRNA from alignment at A-nodosum_M_contig10278:9072..10402+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10278.5.2 ID=mRNA_A-nodosum_M_contig10278.5.2|Name=mRNA_A-nodosum_M_contig10278.5.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1331bp|location=Sequence derived from alignment at A-nodosum_M_contig10278:9072..10402+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10278:9072..10402+ >mRNA_A-nodosum_M_contig10278.5.2 ID=mRNA_A-nodosum_M_contig10278.5.2|Name=mRNA_A-nodosum_M_contig10278.5.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=351bp|location=Sequence derived from alignment at A-nodosum_M_contig10278:9072..10402+ (Ascophyllum nodosum dioecious)back to top |