Homology
BLAST of mRNA_A-nodosum_M_contig1025.8.2 vs. uniprot
Match:
A0A7S3K2I7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2I7_9STRA)
HSP 1 Score: 55.8 bits (133), Expect = 5.410e-6
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 4 DVVSSLNDLAGLLKSQSKYDDAEPLFKRALAIREETLGPRHP 129
+V SLN+LA LL +Q KYD+AEPLF+RAL REE G HP
Sbjct: 16 EVAESLNNLAQLLHNQGKYDEAEPLFQRALKTREEKFGSNHP 57
BLAST of mRNA_A-nodosum_M_contig1025.8.2 vs. uniprot
Match:
A0A7S3NLU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLU4_9STRA)
HSP 1 Score: 56.2 bits (134), Expect = 1.110e-5
Identity = 24/37 (64.86%), Postives = 33/37 (89.19%), Query Frame = 1
Query: 19 LNDLAGLLKSQSKYDDAEPLFKRALAIREETLGPRHP 129
LN+LAGLL+SQ KY++A+PL++RA+ I E+TLGP HP
Sbjct: 2 LNNLAGLLESQGKYNEAKPLYERAIEIGEKTLGPNHP 38
BLAST of mRNA_A-nodosum_M_contig1025.8.2 vs. uniprot
Match:
A0A292PMN7_9PEZI (Uncharacterized protein (Fragment) n=1 Tax=Tuber aestivum TaxID=59557 RepID=A0A292PMN7_9PEZI)
HSP 1 Score: 52.8 bits (125), Expect = 7.220e-5
Identity = 23/43 (53.49%), Postives = 34/43 (79.07%), Query Frame = 1
Query: 1 PDVVSSLNDLAGLLKSQSKYDDAEPLFKRALAIREETLGPRHP 129
P+ ++S+N+LAG+L+SQ KYD++E + +RALA RE GP HP
Sbjct: 1 PNTLTSVNNLAGVLESQGKYDESEEMHRRALAGRERIHGPDHP 43
BLAST of mRNA_A-nodosum_M_contig1025.8.2 vs. uniprot
Match:
U7Q9U4_9CYAN (TPR repeat family protein (Fragment) n=1 Tax=Lyngbya aestuarii BL J TaxID=1348334 RepID=U7Q9U4_9CYAN)
HSP 1 Score: 53.1 bits (126), Expect = 7.220e-5
Identity = 24/39 (61.54%), Postives = 32/39 (82.05%), Query Frame = 1
Query: 1 PDVVSSLNDLAGLLKSQSKYDDAEPLFKRALAIREETLG 117
P V +SLN+LA L +SQ +YD+AEPL+KR+LAI E+ LG
Sbjct: 5 PRVATSLNNLASLYRSQGRYDEAEPLYKRSLAIWEKALG 43
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1025.8.2 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 4
0 1 Expect = 5.41e-6 / Id = 61.90 Expect = 1.11e-5 / Id = 64.86 Expect = 7.22e-5 / Id = 53.49 Expect = 7.22e-5 / Id = 61.54 Sequence A0A7S3K2I7_9STRA A0A7S3NLU4_9STRA A0A292PMN7_9PEZI U7Q9U4_9CYAN
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1
Start 0
Seed ortholog 2880.D7G180
PFAMs TPR_10,TPR_12
Model size 2196
Max annot lvl 2759|Eukaryota
Hectar predicted targeting category other localisation
Exons 8
Evalue 3.35e-06
EggNOG OGs COG0457@1|root,KOG1840@2759|Eukaryota
Description determination of stomach left/right asymmetry
Cds size 831
COG category C
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866390.4429092-UTR-A-nodosum_M_contig1025:129346..130711 1680866390.4429092-UTR-A-nodosum_M_contig1025:129346..130711 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig1025 129347..130711 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866390.4532068-CDS-A-nodosum_M_contig1025:130711..130735 1680866390.4532068-CDS-A-nodosum_M_contig1025:130711..130735 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1025 130712..130735 -
1680866390.4617734-CDS-A-nodosum_M_contig1025:131115..131241 1680866390.4617734-CDS-A-nodosum_M_contig1025:131115..131241 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1025 131116..131241 -
1680866390.4806335-CDS-A-nodosum_M_contig1025:131827..131953 1680866390.4806335-CDS-A-nodosum_M_contig1025:131827..131953 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1025 131828..131953 -
1680866390.4893417-CDS-A-nodosum_M_contig1025:132245..132371 1680866390.4893417-CDS-A-nodosum_M_contig1025:132245..132371 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1025 132246..132371 -
1680866390.4989002-CDS-A-nodosum_M_contig1025:132659..132785 1680866390.4989002-CDS-A-nodosum_M_contig1025:132659..132785 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1025 132660..132785 -
1680866390.51061-CDS-A-nodosum_M_contig1025:133110..133236 1680866390.51061-CDS-A-nodosum_M_contig1025:133110..133236 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1025 133111..133236 -
1680866390.5212817-CDS-A-nodosum_M_contig1025:133525..133651 1680866390.5212817-CDS-A-nodosum_M_contig1025:133525..133651 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1025 133526..133651 -
1680866390.532466-CDS-A-nodosum_M_contig1025:133939..133990 1680866390.532466-CDS-A-nodosum_M_contig1025:133939..133990 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1025 133940..133990 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1025.8.2
>prot_A-nodosum_M_contig1025.8.2 ID=prot_A-nodosum_M_contig1025.8.2|Name=mRNA_A-nodosum_M_contig1025.8.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=277bp
PDVVSSLNDLAGLLKSQSKYDDAEPLFKRALAIREETLGPRHPDVASSLN NLATCLAPQGKYDDAERLFKDALAICEETLGPRHPDVASSLNNLAILLKS QGKYDDAEPLYKRALAIREETLVPRHPDVASSLDNLAVLLKSQGKYHNAE PLFKRALVIREETLGPRHPDVATVLDNLAGLLESQGKYDDAQPLYKRALA IREETLGPRHLDVASSLTSLAILLSSQGNTNELETLFKRALAIREQVLVP GHPDVVETRNNLAELIETKGKCGDAE* back to top mRNA from alignment at A-nodosum_M_contig1025:129347..133990-
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1025.8.2 ID=mRNA_A-nodosum_M_contig1025.8.2|Name=mRNA_A-nodosum_M_contig1025.8.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4644bp|location=Sequence derived from alignment at A-nodosum_M_contig1025:129347..133990- (Ascophyllum nodosum dioecious)CCGGATGTGGTTTCAAGTCTGAACGACCTGGCGGGTTTGTTGAAATCACA
G GTAATGTGGCATTGATCGAGATCCTTTGACTCGCCATTCCGTATTTCGT
ATGTGAGTAGGGGTTACGCTGAACGAAGGACATGACCTGTCAACCAAGTA
TGTGGGTGCGGAAGTATTCATTTGCGCCCATTCTTGAGGACGGACGGGGA
TGATCTGGGAAGACCTTTTGCAAACTTTGTCAAACAGTCATTTCATTGGG
CGCCTTGTTGGGGGAACGAGGCGACGTGGCTGACCACATGGTCCGCCCGA
GTTATAGTTTTAACATCACGCTTTTTCCTCGCAAATCAGAGCAAGTACGA
CGACGCTGAGCCGCTGTTCAAGCGTGCCCTCGCCATCCGTGAGGAAACGT
TAGGTCCTCGACATCCGGATGTGGCTTCAAGCCTGAACAACCTGGCGACT
TGTCTGGCACCACAG GTAGTGTGGCACTGATCGAGACCCTTCGATTCGCC
GCGCGGTATTTCGTAAGTGGATGGGGTTTAAGCTGAACTAAGCACATGGC
CTGTCAACCAAGTATGTGAGGGCGGAAGGATTCATTTGCGCCCATTCTTG
AGGACGGGCGGGGACGATCTGGGAGGACCTTTTGCAAACTTTGTCAAACA
GTTATTTCAGTGGGCACCTCGTTGGGGGAACGGGGGACCGTGGTTGACCA
CTAAGCCCGCCTGAATTGGGATTTTCACCATCACGCTTTTTTCTCGCAAA
TCAGGGCAAGTACGACGACGCTGAGCGGTTGTTCAAGGATGCCCTTGCCA
TCTGTGAGGAAACGTTAGGTCCTCGACATCCGGATGTGGCTTCAAGCCTG
AACAACCTGGCGATTTTGTTGAAATCACAG GTAATGTGGCATTGATCGAG
ATCCTTTGACTCGCGGTTCGGTATTTCGTATGTGAGTAGGGTCGAAGCTG
AACGAATGACATGCCCTGTCAAACAAGTACCTTTGTGAGAGCGCAAAGAT
TCGTTCGCGCCCATTATTGAGGATAGACGGGGGTGACCTGGAACGACCTT
TTGTTAACTTTGTCAAGCAGTCATTTCAGTGGGCGCTTCGTTGTGAGAGG
GAGCCGACGTGGTTGACGACTTGGCCCGCCCGAATTATGACCGTCAGGAG
GTAGGCTTGGAAGCAGCCATTATTTTCACCATCACGCTTTTCCCCCGCAA
ATCAGGGCAAGTACGACGACGCTGAGCCACTTTACAAGCGTGCCCTCGCC
ATCCGCGAGGAAACGTTAGTTCCTCGACATCCGGATGTGGCTTCAAGCCT
GGACAACCTGGCGGTTTTATTGAAATCACAG GTAATGTGGCATTGATCGA
GATCCTTTGACTCGCGGTTTGGTATTTCGTTTGTGAGTAGAAGCTCAACG
AAGGACACGACCTGTCAACCAAGTACCTCTGTGAGAGCGGAAAGATTCAT
TTGCGCCCATTCTTGAGGACGGACGGGGGTGGTCTGGGAAGACCTTTTGC
AAACTTTGTCAAACAGTCATTTCAGTGGGCACCTCGTTGGGGGAACGGGG
CAGTGTGGTTGACAACTTAGCCCGCCCGAATTGGGATTTTCACCATCACG
CTTTCTCCTCGCAAATCAGGGCAAGTACCACAACGCTGAGCCACTGTTCA
AGCGTGCCCTCGTCATCCGTGAGGAAACGTTAGGTCCTCGACATCCGGAT
GTGGCTACAGTTCTGGACAACCTGGCGGGTTTGCTGGAATCGCAG GTAAT
ATGGCATTGATCGAGATCCTTAGACTTGCCGTTCGGTATTTCGTATGTGA
GTAGGGTTGAAGCTGAACGAAGGACATGACCTGTCAAACAAGTACGTCTG
TGAGAGCGGAAAGATTCATTTGCGCCCATTCTTGAGGACAGACGGGGGTG
ATCTGTGAAGACCTTTGGCAAACTTTGTCAAACAGTCATTTCAGTGGTCA
CCTCGTTGGGGAAACGAGGCGACGTGGTTGACCACATGGCCCGCCCGAAT
TGTGATTTTACCGTCACGCTTTTTTCTCGTCAATCAGGGCAAGTACGACG
ACGCCCAGCCGCTTTACAAACGTGCCCTTGCCATCCGCGAGGAAACGTTA
GGTCCTCGACATCTGGATGTGGCTTCAAGCCTGACCAGCCTTGCGATTTT
GCTATCATCACAG GTAATGTGGCATTGATCGAGGTCCTTCTACTCGCCGT
TCGGTATTTCGTATGTGATTAGGGTTGAAGCTGAACGACAGACAAGAAAA
GAGCAGTTTAAGGATCAATTATTTCGTAGTATTTCTATCGTTGGCAGCAC
TATCTTGGGGCGTTTCCCTTCCTTCAGGGCAAGTTTGACGGCGTCGAGTC
GTTCTACAAGCGTCCCTTAGCCATCCGCGAGCAAACGCTAGGTCGTGACC
ATCCGGAAGTGACTGAAAGTCTCTACAGGTTTTGGGGTTTATTCAGGTCA
CAGGCGTAATTTGAAAGTTGTTTGCTGTGGAAACGCATCGGCTGGGATAT
GCCGAGAATCCACTTTACACAGCTATTTTATCTGTGTGTTGTTTTTGTGA
TTTTGCTCGAGCTACTTGTCCTGAACAAGATGTAACTTCTGTCTAGTACG
CGGACCGTAGATGAAGACTTAGGCCTTGTATGATAACTTTGGCAAATGCG
TCATTAGAAGCAGGGCGACTACCTCGACCATATAGTCCCGCAGTATTTCT
ACCCTTATTAGCCACATCCGCTTCGCGCATTCTCCTTACTAACCACCAGG
GCAATACCAACGAGCTCGAGACGCTCTTTAAGCGGGCGCTTGCCATCCGC
GAGCAAGTGCTTGTTCCTGGCCACCCAGACGTGGTGGAAACACGTAATAA
CTTGGCGGAGTTGATCGAGACAAAG GTGAAAATTAATGCTCATTTGCCAA
AAATATTTATCCATTCGGAGCTCGTCGCGTATACTTATAATTTGCCTTCA
GACAAGGTACATACTAACGAAGAAGAATACAGAGGACACCCAGGTATGAC
CGTATTGTAGGTTATAGGGTTTGATGGGCATTGAGAATGTCGAGCTCAAA
AACCAGGAGCTGTAGAGGTCGTGCGAGCGACGAGACTATGCCGGGCATGT
TTTTGCTAGCAAAAGAGGCTGATCCGGTAACAGCTTTGTATTTTTCATGG
CGTAGTATTGTGTGTTGACCCTTGTTATTGTAGCCCAAGAGGAAGCGTAG
TCGATTATTTCGCTTTTTTGCACTCTCTGATCGCGCTATTATTCTTTTGT
TCCAGGGCAAGTGCGGTGACGCCGAGTGA CTTCACAAGCACTCCCTTGCT
ATCCGGGAGAGTAAAGAGCAGCTGGACATGTCTACAAATCTCAACAAACC
TGGGAAGTGCGCTGTGATGACAGGTAGCCACAGGCGACAGCTAATCGCGT
GCGGTTGAAGGGCATTCCCTGAAAACAAAAAAAACGACTGCGTTACACCG
AGGCGCCTGTATATATGTATACTATGCATTTTTAGGTTGATGCAGTATTA
CCGTGGACGTAAGGGGTTGTTTTTGGGAGACTTTGCAGCCTTCTTGGAAC
ATTGAAATTGTGGGTGTGTCTTTATCGGGAATAGCGGGGCGTTGTTAATA
TACTTTCTCCTCTGTATTTCTAGGTAACCTTATGGTATGTCCTCCCAATT
CTTCCGATTCAGGATAGTTCAGCCATTCATCAGGTACAATGACTCTTGTC
TTACCGTCAACTAGGGACAATACCAGATTTACGTAAAGCTCGGATTCGGG
TCGAAGCGTCAGTTAAGGATGCCCTCGAGGGTGCACATGAGGGAAAGACC
GAACAAGGTCAAGTTCGATTGAAGTACGGTCGGGCTTGAGCTTCAGCAAG
CGAGACAAAAGTAACGGCTGGGGGTGATAATAAGAGTTGTCATTAATTTT
TTGTAGCAAAAGTTTGGTTGTAGCTAGCTTACCCTTCAGCCAGGGGGAAA
CTCCTGAGGAGGTGCCCGTGCAGAAATGGTTTCTCGCGCAACTATTGCTT
CCTGCCCGTGTTTTTTGTGTAGTTATGGTGGTTGCGAGTTGCTGCCTGAG
GCACGATGGCGGCGACGTGTTGTATGCGACTGCGCGCTCTAGCTTGGACC
GCCTCCCGGAAAATTATTTAAAGAGCAAGAGTAATTAGAGTAATTCGATC
GCGACGGCGGGGACGAGTCGCTCGGCGAGATGCCCGCGATAGAAGCCACG
ATGTTTCGCAATGTCTCCGCCTCGGAATAATGGGCTGCAAACCTCACATG
GGGGGAATTCAACGCCGTCTGTAAATACGCCGCTGGCGCTGGGCACCTTG
ATGGCCTAGGCCGTCGCCCGAATGGCTGGATAGATATAAAAAAGGTTGAG
GGTTCGACCAGCCATCAGGAGATGGTGCTTTGGTTCTCGAGGGATTCCGA
GGGATTCTCCTGCGATCCGAACCCCCATGGCTGGTAACACGACCGGGGTA
ATTGATCCCCGGAATAATTTTCGTTGTAGTGTGGAGTTTCAACGAGTGGG
AATGGTGCAGGAAAGCGTGCAATGCGGTAATATATCTAGACGTCGGAGGC
GTTCTGCTAAAGCTTCGTTCAAGTGTACCTCTCTTTGTTTTGCATATTTT
TCAGGTGTGAAGGTTGTGATATTTATTCCTAATTCAACAAAAAA back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1025:129347..133990-
>mRNA_A-nodosum_M_contig1025.8.2 ID=mRNA_A-nodosum_M_contig1025.8.2|Name=mRNA_A-nodosum_M_contig1025.8.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=831bp|location=Sequence derived from alignment at A-nodosum_M_contig1025:129347..133990- (Ascophyllum nodosum dioecious) CCGGATGTGGTTTCAAGTCTGAACGACCTGGCGGGTTTGTTGAAATCACA GAGCAAGTACGACGACGCTGAGCCGCTGTTCAAGCGTGCCCTCGCCATCC GTGAGGAAACGTTAGGTCCTCGACATCCGGATGTGGCTTCAAGCCTGAAC AACCTGGCGACTTGTCTGGCACCACAGGGCAAGTACGACGACGCTGAGCG GTTGTTCAAGGATGCCCTTGCCATCTGTGAGGAAACGTTAGGTCCTCGAC ATCCGGATGTGGCTTCAAGCCTGAACAACCTGGCGATTTTGTTGAAATCA CAGGGCAAGTACGACGACGCTGAGCCACTTTACAAGCGTGCCCTCGCCAT CCGCGAGGAAACGTTAGTTCCTCGACATCCGGATGTGGCTTCAAGCCTGG ACAACCTGGCGGTTTTATTGAAATCACAGGGCAAGTACCACAACGCTGAG CCACTGTTCAAGCGTGCCCTCGTCATCCGTGAGGAAACGTTAGGTCCTCG ACATCCGGATGTGGCTACAGTTCTGGACAACCTGGCGGGTTTGCTGGAAT CGCAGGGCAAGTACGACGACGCCCAGCCGCTTTACAAACGTGCCCTTGCC ATCCGCGAGGAAACGTTAGGTCCTCGACATCTGGATGTGGCTTCAAGCCT GACCAGCCTTGCGATTTTGCTATCATCACAGGGCAATACCAACGAGCTCG AGACGCTCTTTAAGCGGGCGCTTGCCATCCGCGAGCAAGTGCTTGTTCCT GGCCACCCAGACGTGGTGGAAACACGTAATAACTTGGCGGAGTTGATCGA GACAAAGGGCAAGTGCGGTGACGCCGAGTGA back to top