mRNA_A-nodosum_M_contig10244.1.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig10244.1.1
Unique NamemRNA_A-nodosum_M_contig10244.1.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: D7FH74_ECTSI (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH74_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 1.640e-61
Identity = 120/252 (47.62%), Postives = 154/252 (61.11%), Query Frame = 1
Query:    1 YKAPEERVSSTIAPPSSVARPNYQDFLRRAVSVVVYKHIKTCQ-------RQAPAAAQFDPDKAKMFNEKHFRTPTLRVAQCFVSNRGTGCAESTDAARLFSFCXXXXXXXXLALMVACKMPSCSHLGMTRASRYNFIQPPAMALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 735
            YKAP+ RV S +APPSSVARPNY D LRR V+VVVY+HIKTCQ        +  AAA+ +P+ ++  N K +R     +A    +          D AR                             ++   RYNF+  P MALPG ++TLREV S PK P VDEI++F+  +F  A LSSECS++CLIYVERLM  ARVPLL  TWKP++L  LLLASK+WQDLSSWN EF++V PEY++  I++LE+ F
Sbjct:   11 YKAPDRRVFSAVAPPSSVARPNYHDALRR-VAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSWRRSAPSLAALRRNESALWGEGGRDGARWAGGGGEPPSAEVHGFNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLF 261          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A6H5JJI4_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI4_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 1.870e-53
Identity = 125/269 (46.47%), Postives = 156/269 (57.99%), Query Frame = 1
Query:    1 YKAPEERVSSTIAPPSSVARPNYQDFLRRAVSVVVYKHIKTCQ---------RQAPAAAQFDPDKAKMFNEKHFRTPTLRVAQCFVSNRGTGCAESTDAARLFSFCXXXXXXXXLALMVACKMPSCSHLGMTRAS---------------RYNFIQPPAMALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 735
            YKAP+ RV S +APPSSVARPNY D LRR V+VVVY+HIKTCQ          +APA  + +  +  M  E      ++ V       R  G                 XXXXX         PS + +    A                RYNF+  P MALPG ++TLREV S PK P VDEI++F+  +F  A LSSECS++CLIYVERLM  ARVPLL  TWKP++L  LLLASK+WQDLSSWN EF++V PEY++  I++LE+ F
Sbjct:  246 YKAPDRRVFSAVAPPSSVARPNYHDALRR-VAVVVYQHIKTCQWKRKMAEERERAPAETETEGSRQDMKVENSDEMTSVVVMPVRDGARWPGXXXXXXXXXXXXX----XXXXXXXXXXGGGEPSSAEVHGFNAKMAEVFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLF 509          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A835YNR4_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR4_9STRA)

HSP 1 Score: 164 bits (416), Expect = 8.410e-44
Identity = 103/283 (36.40%), Postives = 143/283 (50.53%), Query Frame = 1
Query:    1 YKAPEERVSSTIAPPSSVARPNYQDFLRRAVSVVVYKHIKTCQRQ---------------------------------------APAAAQ--FDPDKAKMFNEKHFRTPTLRVAQCFVSNRGTGCAESTDAARLFSFCXXXXXXXXLALMVACKMPSCSHLGMTRASRYNFIQPPAMALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLE 726
            Y+APE+RV S +APPSSVARPNY D +RR V+VVV++H++ C+R+                                        P A +  FDP KA +F+E+H+ +P  R    FV   G                                                     A ALP   + + +V + P  P V+ I++F+  +F  ACLSSECS++CLIY+ERLM +A VPLL +TWKP+VL  LLLASK+WQDLSSWN EF++V PE+++  I++LE
Sbjct:  216 YRAPEKRVPSAVAPPSSVARPNYHDAIRR-VAVVVFQHVQNCERRLARVKRAAEHPPRPPPTRAPPHAPFGGGQPGGVSAPLPVTPGAVREAFDPAKADLFHERHYVSPRYRCT--FVRALGA----------------------------------------------------AGALPCSAFAMAKVETEPTAPSVEAIYEFIRTLFNRACLSSECSLVCLIYIERLMEVAAVPLLATTWKPVVLCGLLLASKVWQDLSSWNVEFSTVYPEFSLRSINRLE 443          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: W4G411_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G411_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.780e-40
Identity = 107/263 (40.68%), Postives = 143/263 (54.37%), Query Frame = 1
Query:    1 YKAPEERV--SSTIAPPSSVARPNYQDFLRRAVSVVVYKHIKTCQRQAPAAAQFDPDKAKMFNEKHFRTPTLRVAQCFVSNRGTGCAESTDAARL----FSFCXXXXXXXXLALMVACKMPSCSHLGMTRAS------------RYNFIQPPAMALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 735
            Y+AP+ RV  S T+APPSSVA+PNY D LRR VSVV+Y+HI+ C+              K   E      TL      + +  +  A ST AA +    F F           L         S+LG++R S            +Y F++ P M  P   Y + +V      P VDEIF F  N+F  A LS+EC+++CLIY+ERLM  A +PLL S+WKPIVL  LLLASK+WQDLSSWN E ++V P++ +  I++LE  F
Sbjct:   50 YRAPDARVDVSETLAPPSSVAKPNYDDSLRR-VSVVLYQHIRRCE--------------KRMRESKSGGGTLSGGFHGLFHSNSAPASSTHAAAVEDEPFPFDSSTVLNGQTVL---------SNLGVSRESVFDEEHFVTPQYKYQFVRLP-MLHPLTYYKMDKVSCKTHIPSVDEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERASIPLLGSSWKPIVLCGLLLASKVWQDLSSWNVEISNVYPQFPLHSINRLERLF 287          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A5D6XKS8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKS8_9STRA)

HSP 1 Score: 148 bits (374), Expect = 9.150e-39
Identity = 98/248 (39.52%), Postives = 138/248 (55.65%), Query Frame = 1
Query:    1 YKAPEERVSSTIAPPS---SVARPNYQDFLRRAVSVVVYKHIKTCQRQAPAAAQFDPDKAKMFNEKHFRTPTLRVAQCFVSNRGTGCAESTDAARLFSFCXXXXXXXXLALMVACKMPSCSHLGMTRASRYNFIQPPAMALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 735
            Y+ P++RV+S +APPS   SVA+PNY DFLRR VSVV+Y+H++ C+++     +     +         +P L      VS  G   A    +A L              L +           +T   +Y F++ P +  P   + + +V S    P VDEIF F  N+F  A LS+EC+++CLIY+ERLM  A VPLL  TWKPIVL  LLLASK+WQDLSSWN E +++ P+Y +  I++LE  F
Sbjct:   72 YRKPDDRVTS-LAPPSAVSSVAQPNYDDFLRR-VSVVLYQHLRRCEKRHSEELRGPSVVSSTVGVDRGTSPFLSAV---VSREGEPDALELPSAPLAPSTGPSSTTSPRLLELPVDEIFREEHFVTPQYKYTFVRLPRV-FPMTSFVMEKVSSKRHVPSVDEIFRFCKNLFNKAQLSAECTIVCLIYIERLMEQANVPLLAVTWKPIVLCGLLLASKVWQDLSSWNVEISNIYPQYPLHSINRLERLF 313          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A6G0WM95_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WM95_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.390e-38
Identity = 101/250 (40.40%), Postives = 142/250 (56.80%), Query Frame = 1
Query:    1 YKAPEERV--SSTIAPPSSVARPNYQDFLRRAVSVVVYKHIKTCQRQAPAAAQFDPDKAKMFNEKHFRTPTL---RVAQCFVSNRGTGCAESTDAARLFSFCXXXXXXXXLALMVACKMPSCSHLGMTRASRYNFIQPPAMALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 735
            Y+AP+ RV  S  + PPSSVA+PNY D LRR VSVV+Y+HI+ C+++          K+  F       P      V+   +++     + S DA+ +            LAL    K+    H  ++   +Y FI+ P M  P   Y + +V      P VDEIF F  N+F  A LS+EC+++CLIY+ERLM  A +PLL S+WKPIVL  LLLASK+WQDLSSWN E ++V P++ +  I++LE  F
Sbjct:   49 YRAPDARVDVSEALPPPSSVAKPNYDDSLRR-VSVVLYQHIRRCEKR------MRDSKSTAFQGLFSSNPANASGEVSSSTINDEDPDNSVSFDASTVLH---GHTLLSGLALSPD-KVFDEEHF-VSPQYKYQFIRVP-MLHPLTFYKMDKVTCKTHIPSVDEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGSSWKPIVLCGLLLASKVWQDLSSWNVEISNVYPQFPLHSINRLERLF 285          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A485KW34_9STRA (Aste57867_12616 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW34_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.990e-38
Identity = 100/253 (39.53%), Postives = 136/253 (53.75%), Query Frame = 1
Query:    1 YKAPEERV--SSTIAPPSSVARPNYQDFLRRAVSVVVYKHIKTCQRQ------APAAAQFDPDKAKMFNEKHFRTPTLRVAQCFVSNRGTGCAESTDAARLFSFCXXXXXXXXLALMVACKMPSCSHLGMTRASRYNFIQPPAMALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 735
            Y+ P  RV  S T+ PPSSVA+PNY D LRR VSVV+Y+HI+ C+++      A     F P    +  E     PT             G A   D +   S             +   K+    H  +T   +Y F++ P M  P   Y + +V      P VDEIF F  N+F  A LS+EC+++CLIY+ERLM  A +PLL ++WKPIVL  LLLASK+WQDLSSWN E ++V P++ +  I++LE  F
Sbjct:   49 YREPHARVDVSETLPPPSSVAKPNYDDSLRR-VSVVLYQHIRRCEKRMRESKGASLPGLFRPLSTSVMTESAMDDPTAD---------NLGMASMPDDSFDSSTVMNGQTVLSGLNLSPDKVFDEEHF-VTPQYKYQFVRLP-MLHPLTYYKMDKVSCKTHLPSVDEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGASWKPIVLCGLLLASKVWQDLSSWNVEISNVYPQFPLHSINRLERLF 289          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A1V9Y8F2_9STRA (Cyclin-Y n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8F2_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.760e-38
Identity = 98/247 (39.68%), Postives = 146/247 (59.11%), Query Frame = 1
Query:    1 YKAPEERV--SSTIAPPSSVARPNYQDFLRRAVSVVVYKHIKTCQRQAPAAAQFDPDKAKMFNEKHFRTPTLRVAQCFVSNRGTGCAESTDAARLFSFCXXXXXXXXLALMVACKMPSCSHLGMTRASRYNFIQPPAMALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 735
            Y+APE RV  S T+APPSSVA+PNY D LRR VSVV+Y+HI+ C+++     + +   + + + +    P   + +  +S R     ES DA+ +            L L +  K+    H  ++   +Y F++   M  P   Y + +V      P V+EIF F  N+F  A LS+EC+++CLIY+ERLM  A +PLL S+WKPIVL  LLL+SK+WQDLSSWN E +++ P++ +  I++LE  F
Sbjct:   49 YRAPEARVDLSETLAPPSSVAKPNYDDSLRR-VSVVLYQHIRRCEKRI---REKEAMASMIVSYEATTLPPESIPEQSLS-RSEQRTESFDASAMHG---ANGILSGLQLSIE-KVFDEEHF-VSPQYKYTFVRLSTMH-PLTYYRMEKVNCKTHIPSVEEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGSSWKPIVLCGLLLSSKVWQDLSSWNVEISNIYPQFPLHCINRLERLF 284          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A024GT47_9STRA (Cyclin N-terminal domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GT47_9STRA)

HSP 1 Score: 147 bits (370), Expect = 4.940e-38
Identity = 102/255 (40.00%), Postives = 143/255 (56.08%), Query Frame = 1
Query:    1 YKAPEERVSSTIAPP---SSVARPNYQDFLRRAVSVVVYKHIKTCQRQ--APAAAQFDPDKAK---MFNEKHFRTPTLRVA--QCFVSNRGTGCAESTDAARLFSFCXXXXXXXXLALMVACKMPSCSHLGMTRASRYNFIQPPAMALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 735
            Y+ P++RV S +APP   SSV  PNY DFLRR VSVV+Y+H++ C+++     AA  + + AK    F E   +T  L  A  +   S   +  +++ D     S+             +           +T   RY FI+ P +  P   Y + +V S    P+V+EIF F  ++F  A LS EC+++CLIY+ERLM  A VPLL +TWKPIVL  LLLASK+WQDLSSWN EF  + P+Y +  I++LE  F
Sbjct:   79 YRKPDDRVQS-LAPPTSVSSVVNPNYDDFLRR-VSVVLYQHLRRCEKRFHEQQAALININAAKNEGRFLEDSPQTDALNTARKEALASCGSSSSSQTIDNRYRASWSNDQNLSSFKLNDIPIDELFREEHFVTPQYRYKFIRHPRLH-PLTTYLMEKVTSKAHVPNVEEIFRFCQHLFQKAQLSPECTIVCLIYIERLMEQADVPLLAATWKPIVLCGLLLASKVWQDLSSWNVEFNCIYPQYPLTCINRLERLF 330          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A1V9ZAD2_9STRA (Cyclin-Y-like protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZAD2_9STRA)

HSP 1 Score: 145 bits (367), Expect = 5.390e-38
Identity = 96/248 (38.71%), Postives = 143/248 (57.66%), Query Frame = 1
Query:    1 YKAPEERV--SSTIAPPSSVARPNYQDFLRRAVSVVVYKHIKTCQRQAPAAAQFDPDKAKMFNEKHFR-TPTLRVAQCFVSNRGTGCAESTDAARLFSFCXXXXXXXXLALMVACKMPSCSHLGMTRASRYNFIQPPAMALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 735
            Y+AP+ RV  S T+APPSSVA+PNY D LRR VSVV+Y+HI+ C+++    A         +        P++  +     +R     ES D++ +            L L +  K+    H  ++   +Y F++ P +  P   Y + +V      P V+EIF F  N+F  A LS+EC+++CLIY+ERLM  A +PLL S+WKPIVL  LLL+SK+WQDLSSWN E +++ P++ +  I++LE  F
Sbjct:   49 YRAPDARVDVSETLAPPSSVAKPNYDDSLRR-VSVVLYQHIRRCEKRLRETAHLATSSQVSYGATTLSGEPSVEASMSRSDHR----TESFDSSTVHP---PNGILSGLQLSLD-KVFDEEHF-VSPQYKYTFVRLPTLH-PLTYYRMDKVNCKTHIPSVEEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGSSWKPIVLCGLLLSSKVWQDLSSWNVEISNIYPQFPLHCINRLERLF 285          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH74_ECTSI1.640e-6147.62Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A6H5JJI4_9PHAE1.870e-5346.47Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A835YNR4_9STRA8.410e-4436.40Cyclin N-terminal domain-containing protein n=1 Ta... [more]
W4G411_9STRA1.780e-4040.68Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
A0A5D6XKS8_9STRA9.150e-3939.52Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6G0WM95_9STRA1.390e-3840.40Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KW34_9STRA2.990e-3839.53Aste57867_12616 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9Y8F2_9STRA3.760e-3839.68Cyclin-Y n=1 Tax=Thraustotheca clavata TaxID=74557... [more]
A0A024GT47_9STRA4.940e-3840.00Cyclin N-terminal domain-containing protein n=2 Ta... [more]
A0A1V9ZAD2_9STRA5.390e-3838.71Cyclin-Y-like protein n=2 Tax=Saprolegniaceae TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10244contigA-nodosum_M_contig10244:1715..4006 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FH74
PFAMsCyclin,Cyclin_N
Model size812
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.81e-43
EggNOG OGsKOG1675@1|root,KOG1675@2759|Eukaryota
Descriptionregulation of cyclin-dependent protein serine/threonine kinase activity
Cds size627
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10244.1.1prot_A-nodosum_M_contig10244.1.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig10244 1726..3415 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866390.15757-UTR-A-nodosum_M_contig10244:1714..17251680866390.15757-UTR-A-nodosum_M_contig10244:1714..1725Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig10244 1715..1725 -
1680866390.2170076-UTR-A-nodosum_M_contig10244:3415..35011680866390.2170076-UTR-A-nodosum_M_contig10244:3415..3501Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig10244 3416..3501 -
1680866390.2272632-UTR-A-nodosum_M_contig10244:3918..40061680866390.2272632-UTR-A-nodosum_M_contig10244:3918..4006Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig10244 3919..4006 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866390.1686416-CDS-A-nodosum_M_contig10244:1725..18071680866390.1686416-CDS-A-nodosum_M_contig10244:1725..1807Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10244 1726..1807 -
1680866390.1774206-CDS-A-nodosum_M_contig10244:1956..20331680866390.1774206-CDS-A-nodosum_M_contig10244:1956..2033Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10244 1957..2033 -
1680866390.1860325-CDS-A-nodosum_M_contig10244:2284..23891680866390.1860325-CDS-A-nodosum_M_contig10244:2284..2389Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10244 2285..2389 -
1680866390.196618-CDS-A-nodosum_M_contig10244:2754..30791680866390.196618-CDS-A-nodosum_M_contig10244:2754..3079Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10244 2755..3079 -
1680866390.2068527-CDS-A-nodosum_M_contig10244:3377..34151680866390.2068527-CDS-A-nodosum_M_contig10244:3377..3415Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10244 3378..3415 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig10244.1.1

>prot_A-nodosum_M_contig10244.1.1 ID=prot_A-nodosum_M_contig10244.1.1|Name=mRNA_A-nodosum_M_contig10244.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=209bp
MFNEKHFRTPTLRVAQCFVSNRGTGCAESTDAARLFSFCCCCCCCCCLAL
MVACKMPSCSHLGMTRASRYNFIQPPAMALPGHVYTLREVPSIPKTPDVD
EIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGS
LLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKFHALSAGTSSYPAA
STRGTTSP*
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mRNA from alignment at A-nodosum_M_contig10244:1715..4006-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig10244.1.1 ID=mRNA_A-nodosum_M_contig10244.1.1|Name=mRNA_A-nodosum_M_contig10244.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2292bp|location=Sequence derived from alignment at A-nodosum_M_contig10244:1715..4006- (Ascophyllum nodosum dioecious)
TACAAAGCCCCGGAGGAGCGCGTATCCAGCACGATCGCCCCGCCGAGCTC AGTGGCTCGTCCGAACTACCAAGATTTTCTCAGGAGAGGTGAGCAAATTT GCTTAGGTTTGCACGAAGAGTGAGATGCGCTTTTCGAAAAATCATTAAAT ATTTTTTGGTTAGATGACCAGATCTATCGATTATGACCTTCTTGTCTTCC GGAGCTCGTGAAGGCCTTGCGCCGGGTGCACGTGCTACTTGGCTTGAAAT CCTGCTTCTTTTGTGTCTTCTTGATCACGCTTACTTGTTGGGAGTTTTGA CAGGATACACAGCATCCATCATCCACTATAACTTACGAGAATGCTCCTGA GCTGCTTGAAACACCGCGATTACATATTATACAAAACTACTTTTGATACC TGGCACTAGCCGGTCGCCAATCGATCGAGATTTGGAATGACTTCACACAC TCGTCCACCGTGCTGTGTGTCCTGCCCCCTCCGATTTCATAAATCCCTTC GCAAGCAGTCTCGGTTGTAGTTTACAAGCACATCAAAACATGCCAGCGGC AGGCGCCGGCGGCAGCTCAATTCGACCCGGACAAGGCGAAAATGTTTAAC GAGAAACACTTCCGCACCCCCACTCTCAGGTGGGAAACAGTACCAAACCA AACGTCTTGTTGCCATACTGTATAACAGATGTTTTGACTGTACAGTAGAA GATTATAGCTACAGCAGTAGTATAAATAGTATACTTTCACCCACCAGTCA GCGCTGACTCTGTGGCAGGAGTGAACACGTGCTGAGTAACCTTCAACTTA CAAGGGCCTTTGTGTTATATTTTCCTTTCGAGTAGGATGCACTGTTCGGT GAACTTGAAACCGTTTGTGACCGAGAGCTACGACATTAGGGAGAGGGATG TAAGTAACTACGAATGAATCTTGGTAGGGTGGCCCAATGCTTCGTGTCCA ATAGGGGCACGGGTTGTGCAGAGTCCACAGACGCGGCAAGATTATTTTCC TTTTGTTGTTGTTGTTGTTGTTGTTGTTGTCTGGCGCTCATGGTAGCCTG CAAAATGCCTTCCTGCTCCCATCTTGGCATGACACGCGCAAGCAGGTACA ATTTTATCCAGCCTCCGGCGATGGCGTTGCCAGGACACGTATATACGCTT CGAGAGGTGCCTTCGATACCCAAGACCCCCGATGTCGATGAAATTTTCGA CTTCGTCACCAACATCTTCGTCAACGCGTGCTTGAGCAGCGAGTGCTCAG TGGTACGTAACGCTAAAATATAGTAAAAAGCCCATTCGTAACCGCTTTTC TTATTGTTCAACCATGCAGCGGGGTCGGGGGGGAGTGGGGTGGTTTCAAC CCATATCTCACGGTAGAGCTATCATCGCTGGGGTGGCAAAATGACCTCTA CCGCTTCGAATAAGAGGAGTAAGGCAAACATACAAGTATATCACGCGCCT GAAGGGTTGCCATCGTGTCTGCTCTTCTATACAAGACAAAGCCATCAACA GGTCCCTAGGAAGACATACTCAAACTCCCGCCTTAAAAAAAAACAACTAA CAAACTTGCCTCCTCGTCCGTGGTCTAATGGGCTGCCTGTCCCGATCCCC CGTCGCTGATCATTTAGATCTGCCTAATATACGTCGAGCGTCTTATGACG CTGGCGCGAGTACCGCTCCTTGAGAGCACCTGGAAGCCGATCGTCCTCGG CAGCTTACTCCTTGCCTCCAAGGTATGATACCTACAATTAATAGCTCTAT TTTTTCAACGAGTCAACACAGCGGAGAGTAAAAAACACAAAGGTTTACGG ATTGAGTCCGAAAGTCAGTTTCTTCTTGTATGTTTATTTTCTGTATTTGT CGTCGCGTACGCGAACATGTCTTTTTGGGGCTCCGATGAAACACGGCGTT GCCATCCGAGATTCATTCCCCCGAGACAGACAAACCTCTGACCAGCTGCT ATACGTGCGGTTTCCTCCTCCAGATGTGGCAAGATCTTAGTTCCTGGAAC GGGGAGTTTGCGAGTGTGTGCCCCGAATACGCGGTGGACAAGATCGACAA GTAAGTTGTTCACTAAAGTCATGGTTGCAGAGGGAAATTGGAGGAAGTAG GTCAAAGTTATGAATGAACGGCCTCTCCGTCGTGACGCCTTTGTCTTGTT AAAAAAAAATCCCACAACACTCCTTGCCCCATCAATGCACTGTCATCAGA CTGGAGGTGAAATTCCATGCGCTCTCGGCTGGGACCTCTTCGTATCCAGC AGCCTCTACGCGAGGTACTACTTCGCCCTGAGGTCAATGTCA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig10244:1715..4006-

>mRNA_A-nodosum_M_contig10244.1.1 ID=mRNA_A-nodosum_M_contig10244.1.1|Name=mRNA_A-nodosum_M_contig10244.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=627bp|location=Sequence derived from alignment at A-nodosum_M_contig10244:1715..4006- (Ascophyllum nodosum dioecious)
ATGTTTAACGAGAAACACTTCCGCACCCCCACTCTCAGGGTGGCCCAATG
CTTCGTGTCCAATAGGGGCACGGGTTGTGCAGAGTCCACAGACGCGGCAA
GATTATTTTCCTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTCTGGCGCTC
ATGGTAGCCTGCAAAATGCCTTCCTGCTCCCATCTTGGCATGACACGCGC
AAGCAGGTACAATTTTATCCAGCCTCCGGCGATGGCGTTGCCAGGACACG
TATATACGCTTCGAGAGGTGCCTTCGATACCCAAGACCCCCGATGTCGAT
GAAATTTTCGACTTCGTCACCAACATCTTCGTCAACGCGTGCTTGAGCAG
CGAGTGCTCAGTGATCTGCCTAATATACGTCGAGCGTCTTATGACGCTGG
CGCGAGTACCGCTCCTTGAGAGCACCTGGAAGCCGATCGTCCTCGGCAGC
TTACTCCTTGCCTCCAAGATGTGGCAAGATCTTAGTTCCTGGAACGGGGA
GTTTGCGAGTGTGTGCCCCGAATACGCGGTGGACAAGATCGACAAACTGG
AGGTGAAATTCCATGCGCTCTCGGCTGGGACCTCTTCGTATCCAGCAGCC
TCTACGCGAGGTACTACTTCGCCCTGA
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