Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 304 |
| Hectar predicted targeting category | signal peptide |
| Exons | 2 |
| Cds size | 189 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866389.4519-UTR-A-nodosum_M_contig1024:121334..121449 | 1680866389.4519-UTR-A-nodosum_M_contig1024:121334..121449 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1024 121335..121449 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866389.4664516-CDS-A-nodosum_M_contig1024:121449..121540 | 1680866389.4664516-CDS-A-nodosum_M_contig1024:121449..121540 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1024 121450..121540 + |
| 1680866389.4801514-CDS-A-nodosum_M_contig1024:122194..122292 | 1680866389.4801514-CDS-A-nodosum_M_contig1024:122194..122292 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1024 122195..122292 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1024.14.1 >prot_A-nodosum_M_contig1024.14.1 ID=prot_A-nodosum_M_contig1024.14.1|Name=mRNA_A-nodosum_M_contig1024.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=63bp
MAKNVARGAMLVLGLAASLAGAQYDDLNFEDMMGGYGDYGYGGGYGGYGG
YGGMGDMMPGLAG back to topmRNA from alignment at A-nodosum_M_contig1024:121335..122292+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1024.14.1 ID=mRNA_A-nodosum_M_contig1024.14.1|Name=mRNA_A-nodosum_M_contig1024.14.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=958bp|location=Sequence derived from alignment at A-nodosum_M_contig1024:121335..122292+ (Ascophyllum nodosum dioecious)
AGCCCTTTTCCAGTCCAGATAAGGGACAGAGAGAGAGAGAGAGATTTGAG
AGAGGAAAAGCTGGAGCAGTCAAGAGGCAAGGAAGGGACCATACTGGTAT
TAGTAGCTGGTAGCCATGGCGAAGAACGTTGCTCGTGGCGCGATGTTGGT
GCTAGGACTGGCAGCCTCTCTTGCTGGGGCTCAGTACGATGACCTCAATT
TCGAAGGTGATGGTACTAAAGAGAATGAAAGAAGAAGAAAATGAGGTGTC
GTAGACATTTTTGGAACAATCCTGTCTGTTGACAGCAGTAGTGTTAACAA
ACATGTGACAAATAAAAAAATAGAACCAAACAAAAAGAAACTGAAGCGCC
ATAGACATGGTGGCACAATCGAGTCTGTTAACAGCAGTAGTTATGAACAA
ACATGTAATGTAACAGAAAAATAAATAGAAATAAGACCAATAAAAGAGAT
GCGTCGTTGTCATTTTATTATCTCCAAGTTACAACTCCTTTCAACTAGTC
ATCTGTCTCTCTATAATATATAGTAAAGAGAACTATCAGTAGGCGTATCA
CTTGGCATTGCTCAAAATGATATACAAAAGTAAATAATACAATATATCAG
TCACAATAGAAACTAAACATCAATACTAAGCAAAGCATGTACACATTCAT
CTACTCATCTCTCTATCTCTCTAATAAATAAATGACGAGAGCTATACCTC
TTCGCATTGTTGTTGTCATCCAGCTCAAAGTGATCTATAGTAGTATTAAT
AGTATATAGGAGTAGTATATAATAGTCACAATAGAAGCACCAATACGAAA
CAAACCATGTACACATTCATCAAGTATAATTTTCCCCGTTTTTTTTTTTC
ACCTTGGCAGACATGATGGGCGGCTATGGAGATTACGGCTACGGGGGGGG
CTACGGAGGCTACGGGGGCTACGGGGGCATGGGTGACATGATGCCTGGGC
TGGCGGGC back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1024:121335..122292+ >mRNA_A-nodosum_M_contig1024.14.1 ID=mRNA_A-nodosum_M_contig1024.14.1|Name=mRNA_A-nodosum_M_contig1024.14.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=189bp|location=Sequence derived from alignment at A-nodosum_M_contig1024:121335..122292+ (Ascophyllum nodosum dioecious)
ATGGCGAAGAACGTTGCTCGTGGCGCGATGTTGGTGCTAGGACTGGCAGC
CTCTCTTGCTGGGGCTCAGTACGATGACCTCAATTTCGAAGACATGATGG
GCGGCTATGGAGATTACGGCTACGGGGGGGGCTACGGAGGCTACGGGGGC
TACGGGGGCATGGGTGACATGATGCCTGGGCTGGCGGGC back to top
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