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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 280 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 279 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866389.2853792-CDS-A-nodosum_M_contig10223:5047..5146 | 1680866389.2853792-CDS-A-nodosum_M_contig10223:5047..5146 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10223 5048..5146 - |
| 1680866389.2960029-CDS-A-nodosum_M_contig10223:6218..6398 | 1680866389.2960029-CDS-A-nodosum_M_contig10223:6218..6398 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10223 6219..6398 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10223.1.1 >prot_A-nodosum_M_contig10223.1.1 ID=prot_A-nodosum_M_contig10223.1.1|Name=mRNA_A-nodosum_M_contig10223.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=93bp
DRDRLEANLRQTLGKKKGKKGASKKGATRGGSKASVPVSAGGDRGFGAAV
AGKGQGTVPQVSPRKAAAFIAPDADAAVGGADDSDRVPSTAV* back to topmRNA from alignment at A-nodosum_M_contig10223:5048..6398- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig10223.1.1 ID=mRNA_A-nodosum_M_contig10223.1.1|Name=mRNA_A-nodosum_M_contig10223.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1351bp|location=Sequence derived from alignment at A-nodosum_M_contig10223:5048..6398- (Ascophyllum nodosum dioecious)
GATCGAGATAGGCTCGAGGCCAATCTCCGACAGACGCTCGGCAAGAAGAA
GGGCAAGAAAGGCGCGAGCAAAAAGGGGGCGACAAGAGGGGGCAGCAAGG
CTTCCGTCCCCGTTTCGGCGGGTGGCGACAGGGGTTTCGGTGCTGCGGTT
GCAGGGAAGGGGCAAGGGACTGTTCCGCAGGCGAGTATGTGGGGTTTCAG
CGAGAAGCGGGGGGGATTGAGGAAGTTTTGGTGGCCCCCGTGGGCGCGCG
TATCCTGGTCTTGCTGGAAACTACTGTACAAACAACGTAGCACCAACTTT
GTTCCTGGCTTTCCACGCTCCTCGTCTTTCCTCCGCGTGAAAAAAAGTCC
GAAAAAAAGTTAGGTGAAGTCTCTTGGAGCTTCTGTACGCATAATCATGT
AGGGTTTGATGCGCACTTAAAAACGAAGTAATTTTCTCGCGTGCCTTCAT
ATATGGCGGGTGGGGGGGTTCCACTTAAAACAGTATTTTGGTGAGATAAA
GAACGAACTTTTTGTTTTAAGAACGGGGCCCGAAATTTTACGTTTTGAAC
CACCTCGCCGATTTGGCTCGGCGACGGCTCAGGCGAAAGCTCTTATCCAT
ACAACCACGTAAAAGAAAAAGATGAAACTATACGATGCTGTTCCAATCAA
GAGTTACAGTGGTTTAAGAAAAAAATCCCAATGGTCAGTAAAGTTGCCAG
GAATCGATTTGTCTCACGAGAAACGCCATATTTGCTGTAACGGGGTCGGG
AGTTGGTCGATACTCTTGACCGAGGTGTTGAACTGTTCCCATGGTCAAGT
CCTTTTGTTTGAGCGTAGTCAATAGGTATAACTCGCAAAAAGGGCGTGCG
CTACGTGAATAAACGTCTTCTGATCTTTAAAGAAAAGCTCGTTCTTTAAA
AAAAAGTTCGTTCTTTATTGGATTTTTGGCGTGGGCGGGTGCTTTGATGA
GTTGAAAACCAGGTTTGGGTGTTAGGTGTGGCGTTTAACGGATATGTCCC
CTGAGTTCTTGGGAAGGGGGAGATATCGAAACAGTCCCTCCTGTAATAGA
CGGATTTCATAAATCCTCGAGTGAAAAAAAACGGATTCTGTTTGGGGCAT
TCTTTTCTGTTAGTCTTTAAATCGAGGGCAGGGAAGGGGGTGTTTTGATA
TCGTCCCCTCTTGACTTCAGGGGATACATTGACCGGATCCCTCCCCCACT
GCCCCCCCCCCCCCTGTCCCTCCGCAAAAAAAAAACTTCAATAACACATC
AGGTATCTCCGAGAAAAGCTGCCGCGTTTATTGCACCAGACGCAGATGCT
GCTGTGGGAGGAGCTGATGACTCCGATAGAGTGCCCTCAACAGCAGTGTA
G back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig10223:5048..6398- >mRNA_A-nodosum_M_contig10223.1.1 ID=mRNA_A-nodosum_M_contig10223.1.1|Name=mRNA_A-nodosum_M_contig10223.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=279bp|location=Sequence derived from alignment at A-nodosum_M_contig10223:5048..6398- (Ascophyllum nodosum dioecious)
GATCGAGATAGGCTCGAGGCCAATCTCCGACAGACGCTCGGCAAGAAGAA
GGGCAAGAAAGGCGCGAGCAAAAAGGGGGCGACAAGAGGGGGCAGCAAGG
CTTCCGTCCCCGTTTCGGCGGGTGGCGACAGGGGTTTCGGTGCTGCGGTT
GCAGGGAAGGGGCAAGGGACTGTTCCGCAGGTATCTCCGAGAAAAGCTGC
CGCGTTTATTGCACCAGACGCAGATGCTGCTGTGGGAGGAGCTGATGACT
CCGATAGAGTGCCCTCAACAGCAGTGTAG back to top
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