Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 1 |
Start | 1 |
Model size | 895 |
Hectar predicted targeting category | other localisation |
Exons | 6 |
Cds size | 603 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1680866389.1427884-CDS-A-nodosum_M_contig10220:6167..6274 | 1680866389.1427884-CDS-A-nodosum_M_contig10220:6167..6274 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10220 6168..6274 + |
1680866389.15145-CDS-A-nodosum_M_contig10220:7467..7542 | 1680866389.15145-CDS-A-nodosum_M_contig10220:7467..7542 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10220 7468..7542 + |
1680866389.159348-CDS-A-nodosum_M_contig10220:8067..8158 | 1680866389.159348-CDS-A-nodosum_M_contig10220:8067..8158 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10220 8068..8158 + |
1680866389.169058-CDS-A-nodosum_M_contig10220:8953..9014 | 1680866389.169058-CDS-A-nodosum_M_contig10220:8953..9014 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10220 8954..9014 + |
1680866389.184174-CDS-A-nodosum_M_contig10220:9463..9590 | 1680866389.184174-CDS-A-nodosum_M_contig10220:9463..9590 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10220 9464..9590 + |
1680866389.1971622-CDS-A-nodosum_M_contig10220:10113..10255 | 1680866389.1971622-CDS-A-nodosum_M_contig10220:10113..10255 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10220 10114..10255 + |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1680866389.2130327-UTR-A-nodosum_M_contig10220:10255..10547 | 1680866389.2130327-UTR-A-nodosum_M_contig10220:10255..10547 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig10220 10256..10547 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10220.1.1 >prot_A-nodosum_M_contig10220.1.1 ID=prot_A-nodosum_M_contig10220.1.1|Name=mRNA_A-nodosum_M_contig10220.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=201bp
MVEGDEDVVLLEEGPFRLTASCQTINYTNSDWDDVYFYSSHYYSTYISST YLGFNSTSSSSFPSDSSTFSYGYDDDYTDDYNDNYVHSDSIAALELTFTA SDSDYLFGSPTYIRYPHEERIVGSYEAGESRTQIILRGRDGGYSQDSTLQ SLSGSYITTNGANTIGAHKSQTRWYPYNEESSFPEGVDCLVAGVISYTAS * back to topmRNA from alignment at A-nodosum_M_contig10220:6168..10547+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig10220.1.1 ID=mRNA_A-nodosum_M_contig10220.1.1|Name=mRNA_A-nodosum_M_contig10220.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4380bp|location=Sequence derived from alignment at A-nodosum_M_contig10220:6168..10547+ (Ascophyllum nodosum dioecious) ATGGTAGAAGGCGACGAGGACGTGGTACTTCTCGAAGAAGGGCCCTTTAG
GCTCACGGCTTCTTGCCAAACCATCAACTACACCAACAGCGACTGGGACG
ACGTCTAGTGAGTGCCACACTTGAACCAAATCGGTTCGTTGTTATTCCAC
TTGTAAATTAGATAGTATGTGTCATTTACAAAATGGGCGTACTACGTACC
ACGTACCCAGTACGTATTATGCATGTGGGTGTATCTATATATATAGAGAG
AGAGCTATGTATGTAGTCTATGGATTTATTATGTACTACACATACATAAT
CGCGCAGTCGCATCCCCCACTGGGGGTGTATGTATTTATGTATGTGTGTA
TGTATGTATAGCCGTGTATATATTGTATCGTCACTTTTATCAGACTTGGC
GCGAACTGGTTAAGGTTTACAAACCTGTTCGTGGTCAACCGAACTGGTAC
AATCAAACTCTCCCCGTCTGCGCTCGATTTTTTTTTCTCGCGATACAGGC
TCGGCCGTCCCATCCCGCATCAGTCCGCTCATTCTCCACGCCCAAACTGT
ATTATACCTTAATATCATATTATTTGGCGCGTTTCACGAAGGGTGCATTT
CTTTGTATATTACCCTAGTATAATTTATATACCGTATTACACAGTAAACA
ACATTTTGGTGAAATAAAGAACAAAGTATTTTTTAAAGAACGAGGATTGC
TAAGTTTAAAGGGGCCTGTGGGGTAGACGTATCCGGTAATAATTGTTTGC
CCAAACAAGTGCTTCAAAGTGACTATTAATATCTGTGACGACCAACAGAA
TTGTAAACGCCATATAAGAACGTGGAAATGTTTCCGATAAGCAGTTATGA
AATTTCTTTATGCAAAATGTATTCCATCGGAATCGTTTCCGATTGTATGT
CTCGGAAAAAAATCCGTTCAACTCCAAACCGGAATAACTTGTTTGGTCGC
AAAATGAAAAGTTCGTCAAACTATTTGTTCATCCGTCTCACAGACGTTAT
TGTCAGAAACAAACATCGCGAACTTCAGTTGCTTTTAAAATTGGAGAATG
GTGATGTCCGCTGTAATCAATATATCGCCTGGCTCCTTGAAATCTACCAA
TCCTCGTTCTTAAAAAAATAGTTTGTTCTTTATTTCACAAAAATGTTGTT
AGTACAGGTGGTCAGCTTACTGCCGTATTTTCTCGACAAAACCTCTGTCC
GACTTTCGAGCATACTATCATAGTGCAAGTGAAATCATATGCCCCCCGCC
CCCGCCTCCTAACATTGGCAGCGTTGATTTTCACGATTCTTGCGTTTCAG
CTTCTACTCTTCCCACTACTACTCCACCTATATCTCGTCTACCTACCTCG
GCTTTAACTCCACCTCCTCGTCAAGGCAAGTCTACACTATTTTGAGGCAC
ATGCATTGATGGCACTAGCCCAGTTTCAGCTCGGGTCGTCGAGTGCGAAC
ATCGACAAATGGTATTGGATGGATTCAAACATCGTACGCACCGATTTAGT
TCAAAGAACCTCGTTTAGCAGCGTTTTGATCGACACGCGGGAAATCGCGT
TTTTTGCCGTTGTCGCCGAATATGGACTACGATCCACCCTTCACTTGAGT
GTCGTATCTCATTTCGAACCCCAGCCAGCGCGACGACCGGAACCTAAGGC
GAATATTTCCCACGCGGATGGTGTATGCTTTCACTTTTAAACCGCGGAGT
AGATGACTTGGATCCTCCATCGCGCAAAATAGCGTTCATTGACGCATGGA
AAGGCGCCTGACACGATCTGTATCGATCGATGATAACTTCACGATTGCGA
AGAAGGTTGTCGAACCATCGTTCTCGAAATATTTCACGCTTTGCTGCTGG
CAACATCCACGTCGACTTATAACATCATCTTGATTGACCATCATCGGCAG
CTTCCCATCGGACTCAAGTACCTTCAGCTACGGCTATGACGACGACTATA
CGGACGACTACAATGACAACTATGTTCACTCCGACAGCATCGTGAGTATG
ATGTAACTAACCCCTTAGTCCATGCGCAAAACAAAACAGGAAAGCGCAGT
TAAAATATTCGGAATCCAACAAAGAGTGTAAGCTATAAAGACTACTAATA
TTAATGTGTTATTATTAATATTGGTGTGTTATTATTAATATTAATGTGTT
ATTATTAATATTGGTGTGTTATTATTAATATTAATGTGTTAATATTAATA
TTAATATGTTGGTACTGTTAATGGGTAACCTTCTTATTTATTCCTTTTTA
TTCCTTTTTGTAGTGGTACTCCATAGTGGTACTCCGGTACAAGTTTTTTC
GCGTTTCTGTATATAACGACAGACCGGGCACTAAAAGGATTAATGATGCT
GTATCTTGAAACTTCAAGATGGCGGTTGCCAGACACCGGGGACCTTACTG
TCCTTTATGATATGGAAAAGTGTGCGTTCGAACCTCTCCGAGAGAGACTA
AAAGACAGTTAGAGGGGGCAAAGGGGTCCGTGTTCAGATGAGCTATCCAG
GATGTTGCTCGGTGTGGTGATTTCGATTTTATACAACAAAAACCGAACAA
AATAACTCGTAAAACTCTGGAGCTCAAATTTGACTTCGCGGAGTTGTTTT
TGGGGCCAACGGGCAACCATCGACGGCCACCTTCGATGGTCGAATAAACC
CCAGCTGTCGTGGAAGGTATTCCCGATGTACACACACACATGAATATATA
TATACCGGTATATACTTGTAATGTTTCATATCGCCAAACTTCTGTGCTCG
GACGACTTCTCCCGTTGGCGTGATAATCTTACGCAGGCCGCGCTTGAGCT
GACCTTCACAGCCAGTGACTCCGACTACCTCTTCGGCTCGCCCACCTGTG
AGAGAACCTATATTATTAGTAATGTAATGAACAACAGTGATGTCTGTACC
TGTGCTAACTCGAGTTGAAACGCCTATACTACCCGATCATAGTGGTTGAC
TCGATCGAAACACACACATGAGCACATACAAGTGCGCTTGGGGTGGGGAC
TTGTTTCTTAACGAAACGTGTTCGCCTTCAAGTACTATCGGTACTGCCGT
ATTAGCTCCAGAACGGTAGCTAATTTCCGGCTACAATACACAGTGCTCTC
ACCCTCTCTTGGGCTTTCTGTGGGCTAAGGCATGAAGCGGTTGGCGCATT
CTCGATCACGAAGTGGGATTCTCCCGCTCTGGGAAAGAAAGGTGTAGCAG
AGCAGGTGCTGCACATTATGTGCCTTTCCGCACCATCATAGCTCCCTCGG
CATGTCACCCGAGATTCTTGCCGTTGTCCTCCGGTTTTCGCCACAGACAT
TCGTTACCCTCACGAGGAGAGAATCGTAGGTAGCTACGAGGCCGGAGAGA
GCCGCACCCAGATCATTCTCCGCGGGAGAGATGGCGGTTACTCCCAAGAT
AGCACCCTTCAGTCCCTATCTGGGTGAGTGCGCAACCGATACTCTAAGGC
ATTAGACCTATAGGGGTACGTGATGGTGGATAGCAACTGTACTCCAAAGT
TTCTACGTTGTTGGCTAACGACAGAGCCACACACAAAATTGCGTCAGGCA
CATACCACGTAGTTATTCATGAAAGTGGCGTGATTGGTACGTAATTGGTC
GAAGGTTACCTCATCGTCCCGTCTAATACGTCTGCGTGAATCTATGTGGG
TCGATGCAGCATGCGTCTGTTTGCGTTTAGTCTCGCGAGCTGTCTTGCCG
AAAGCGTTTCCTCGCTTTCCGTCTACAACACGTTTCGCGTGGGAAGACGA
GGTTGGGATAGCGAGGGGTTGGCTGGTGGTGCCAGATTTTTTATTTGGTT
TCGGAAATCAACGTTTACCCTTACATCGAACGATCGGCAAAGGACCCACC
CGTCCTACACACAAGGGATCGTTTTCTCTATGGTCCGTCTTCTGTGCCGA
TCTCATTACCCCCTGGATTCCTTCTTTCCTACCTCATTGTGAGCAGGAGC
TACATCACCACCAACGGCGCCAACACCATCGGCGCCCACAAATCGCAAAC
TAGGTGGTACCCGTACAACGAGGAAAGTTCTTTCCCCGAAGGGGTCGACT
GCCTGGTTGCCGGCGTGATCAGCTACACGGCCTCCTAAGTAACCGCCTAG
CTTCTAGCCTTCCACCCATTCCATTCATGGTCTCTCTAAGCCCCCACCTC
ATCCAGCAAGAGACTGGGATCATTTGGTGTGGCTTGTGCATAATCAGCAC
TACTTGCGATGTGTTTAAAATAGCTTAATCTTTGGGCACCTCAAGTATAG
GTAGCGTAGGATCGTTTTTCTTTGTGTACGCATTAAGTTGGACTGATATA
TGACCGCCTTCTTTTCTCTGGTACAGTATCCTCATAGTCATGGCTATTCA
AATATATAATATAGCTTATACTAAGCAGAG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig10220:6168..10547+ >mRNA_A-nodosum_M_contig10220.1.1 ID=mRNA_A-nodosum_M_contig10220.1.1|Name=mRNA_A-nodosum_M_contig10220.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=603bp|location=Sequence derived from alignment at A-nodosum_M_contig10220:6168..10547+ (Ascophyllum nodosum dioecious) ATGGTAGAAGGCGACGAGGACGTGGTACTTCTCGAAGAAGGGCCCTTTAG GCTCACGGCTTCTTGCCAAACCATCAACTACACCAACAGCGACTGGGACG ACGTCTACTTCTACTCTTCCCACTACTACTCCACCTATATCTCGTCTACC TACCTCGGCTTTAACTCCACCTCCTCGTCAAGCTTCCCATCGGACTCAAG TACCTTCAGCTACGGCTATGACGACGACTATACGGACGACTACAATGACA ACTATGTTCACTCCGACAGCATCGCCGCGCTTGAGCTGACCTTCACAGCC AGTGACTCCGACTACCTCTTCGGCTCGCCCACCTACATTCGTTACCCTCA CGAGGAGAGAATCGTAGGTAGCTACGAGGCCGGAGAGAGCCGCACCCAGA TCATTCTCCGCGGGAGAGATGGCGGTTACTCCCAAGATAGCACCCTTCAG TCCCTATCTGGGAGCTACATCACCACCAACGGCGCCAACACCATCGGCGC CCACAAATCGCAAACTAGGTGGTACCCGTACAACGAGGAAAGTTCTTTCC CCGAAGGGGTCGACTGCCTGGTTGCCGGCGTGATCAGCTACACGGCCTCC TAA back to top
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