mRNA_A-nodosum_M_contig1020.7.2 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1020.7.2 vs. uniprot
Match: D7G711_ECTSI (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G711_ECTSI) HSP 1 Score: 426 bits (1094), Expect = 2.810e-143 Identity = 233/361 (64.54%), Postives = 267/361 (73.96%), Query Frame = 2 Query: 221 MRRFMLFMGVVISCESFLVSHVHVRYPQRVLQVHTRRPGEVDESLIFIKSPASDKSPSQLSRTRGGTPSDPNESAGKIDRRSLLKVVPSTLAAGIVGLLAASE--QAASARVIPRAAKVGEKVVVIGGSGFVGSRVCEMLVEAGAKVSSVSRTGSKPTKWADGESWVEKVSWNKGDPTAGDLSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAASQAAKANVGRFVYVSVSHLVPEALGGLAFQGYFKGKKRAEEAIAKSFPSTGVIIKPTFIYGGDSFGLTPPRVSDGYGAGIDALLSFGPVRGVAGISPGLIKVALSPPVSRDNVALACVAGALGRLEGTSYDGADEINAAALKA 1297
M R + + C SFLV V +R P E + + + D + S S S G +DRR+LL +P+T+ AG++G A + A AR P+AA G VVV+GG+GFVGS+VCE+LVEAGA V+SVSR+GSKP KWA G+SWV+KVSW KGDPTAGDLS +F A+AVISCVGVIGGSD EME+GNGDVNV AA QAA GRFVYVSVSHLVPEA GG AF+GYF GK RAEEAIAKSFPSTGV+IKPTFIYGGDSFGLTPPRVSDGYG+GIDALLS GP+R +AGISPGLIKVALSPPVSRDNVALACVAGALGRL+GT +DGADEINAAA KA
Sbjct: 1 MLRLTVLAAFMAGCSSFLVPPVLLRPPIM----------ETSKGALHMTQNNDDMADSDYSGL----------SDGPVDRRTLLTAIPATVVAGVLGFAVAGSAPEKALARATPKAAPAGTNVVVLGGNGFVGSKVCELLVEAGATVTSVSRSGSKPDKWAAGQSWVDKVSWTKGDPTAGDLSAVFGKAAAVISCVGVIGGSDEEMEKGNGDVNVQAAKQAASGKAGRFVYVSVSHLVPEAFGGAAFKGYFDGKSRAEEAIAKSFPSTGVLIKPTFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTKFDGADEINAAASKA 341
BLAST of mRNA_A-nodosum_M_contig1020.7.2 vs. uniprot
Match: A0A7S0MWV8_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MWV8_9CHLO) HSP 1 Score: 245 bits (626), Expect = 3.200e-73 Identity = 155/299 (51.84%), Postives = 192/299 (64.21%), Query Frame = 2 Query: 404 RTRGGTPSDPNESAG-KIDRRSLLKVVPSTLAAGIVGLLAASEQAASARVIPRAAKVGEKVVVIGGSGFVGSRVCEMLVEAGAKVSSVSRTGSKPTKWADGESWVEKVSWNKGDPTAGDLSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAASQAAKANVGRFVYVSVSHLVPEALGGLAFQGYFKGKKRAEEAIAKSFPSTGVIIKPTFIYGGDSFGLTPPRVSDGYGAGIDALLSFGPVRGVAGISPGLIKVALSPPVSRDNVALACVAGALGRLEGTSYDGADEINAAALKA 1297
RT S E+ G ++ RR +L P+ A ++G +A SA V+ A G KVVV+GG+GFVGSRV E LV GA+V SVS++G KP A +KV+W K D D S FSGA AVISCVGVIGGSD M+ GNG NVAAA AA A V +FVYVSV+ +VP A+ G+A +GYF GK+ AE AIA FP T V++ P+FIYGGDSF L PPRV GYG I+ LLS G +R ++GI G I + L+PPV+ ++VA A VAGALG + DG D INAAA KA
Sbjct: 40 RTISAASSKKEETQGTQVTRRQVLTAAPAAALAVVLGTTGMPLEA-SAMVM---ANPGTKVVVLGGNGFVGSRVVEALVARGAEVVSVSKSG-KPAAIAG----ADKVTWTKADVLTADFSETFSGADAVISCVGVIGGSDEYMQTGNGATNVAAAKAAAAAKVPKFVYVSVASIVPAAVDGIALKGYFAGKREAEAAIAAEFPGTSVVVGPSFIYGGDSFVLNPPRVPAGYGGAIEGLLSSGVMRALSGIG-GPIGLTLAPPVAVESVAGAVVAGALGLVPAGKIDGTDAINAAAKKA 328
BLAST of mRNA_A-nodosum_M_contig1020.7.2 vs. uniprot
Match: A0A061RK23_9CHLO (Nad-binding rossmann-fold superfamily protein isoform 1 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RK23_9CHLO) HSP 1 Score: 233 bits (593), Expect = 2.900e-68 Identity = 132/288 (45.83%), Postives = 183/288 (63.54%), Query Frame = 2 Query: 443 AGKIDRRSLLKVVPSTLAAGIVGLLAASEQAASARVIPRAAKVGEKVVVIGGSGFVGSRVCEMLVEAGAKVSSVSRTGSKPTKWADGES--WVEKVSWNKGDPTAGDLSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAASQAAKANVGRFVYVSVSHLVPEALGGL----AFQGYFKGKKRAEEAIAKSFPSTGVIIKPTFIYGGDSFGLTPPRVSDGYGAGIDALLSFGPVRGVAGISPGLIKVALSPPVSRDNVALACVAGALGRLEGTSYDGADEINAAA 1288
+G I+RR L V + L A V + A Q + EKVVV+GG+GFVGSR+CE L ++G +V SVSR G P D E+ W K+SW K D DLS +F + VISC+GVIGGS ME GNG N+AA ++ A V +FVY+SV+ +VP+++ GL + +GYF GK+ AE A+ ++FP + V+++P+F+YGG FGL+PPRV+ YG+ ++ALLS PV+ +A I PG + + L PPV+ +NVA A VAGA+G + DG EINAAA
Sbjct: 52 SGSINRREALSGVTAFLIALPVSVAAEPVQPP---------ETAEKVVVLGGTGFVGSRICERLAKSGFRVISVSRRGKVPEP-TDEEAPVWKSKISWIKADVLKDDLSAIFEDSKTVISCIGVIGGSYENMETGNGAANIAAVKKSKSAGVEKFVYISVASIVPDSVEGLLGSSSLEGYFAGKREAEAAVLEAFPDSAVVVRPSFVYGGSEFGLSPPRVAGAYGSAVEALLSSSPVKNIARIMPGPVALTLEPPVAVENVAAAAVAGAVGAIPPGIVDGTAEINAAA 329
BLAST of mRNA_A-nodosum_M_contig1020.7.2 vs. uniprot
Match: A0A7S0YYY3_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YYY3_9CRYP) HSP 1 Score: 213 bits (543), Expect = 2.440e-61 Identity = 119/241 (49.38%), Postives = 157/241 (65.15%), Query Frame = 2 Query: 578 KVVVIGGSGFVGSRVCEMLVEAGAKVSSVSRTGSKPTKWADGESWVEKVSWNKGDPTAGDLSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAASQAAKANVGRFVYVSVSHLVPEALGGLAFQGYFKGKKRAEEAIAKSF-PSTGVIIKPTFIYGGDSFGLTPPRVSDGYGAGIDALLSFGPVRGVAGISPGLIKVALSPPVSRDNVALACVAGALGRLEGTSYDGADEINAAALKA 1297
KVVV+GG+GFVGSRV + LVE+G +V+SVS +G+ P +WA E WVE+V W GD DL L G+ AV+SCVGVIG + + GNG V QA A V RFVYVSV+ V + +GG+A QGYF GKK +E AIA+++ P +++ P FIYGGDSF ++PPRV+ YG+ ++ LS P + +AG PG+ +AL PPV D+VA A AG LG L+ DG + I AA A
Sbjct: 57 KVVVLGGAGFVGSRVSKTLVESGLQVTSVSLSGTPP-EWAKDEPWVEQVEWTAGDSAKDDLKGLMRGSKAVVSCVGVIGFDNEYLAAGNGPPTVEGCQQAKAAGVPRFVYVSVADAVRDNVGGIALQGYFAGKKESEAAIAETYGPERSLVVGPGFIYGGDSFAISPPRVNQAYGSLVENTLSLAPFKALAGALPGVAGLALQPPVCVDDVAKAVTAGVLG-LQSGRVDGTESIKAAGQAA 295
BLAST of mRNA_A-nodosum_M_contig1020.7.2 vs. uniprot
Match: A0A7S0TQM2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TQM2_HEMAN) HSP 1 Score: 212 bits (539), Expect = 3.090e-61 Identity = 117/237 (49.37%), Postives = 155/237 (65.40%), Query Frame = 2 Query: 578 KVVVIGGSGFVGSRVCEMLVEAGAKVSSVSRTGSKPTKWADGESWVEKVSWNKGDPTAGDLSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAASQAAKANVGRFVYVSVSHLVPEALGGLAFQGYFKGKKRAEEAIAKSFPS-TGVIIKPTFIYGGDSFGLTPPRVSDGYGAGIDALLSFGPVRGVAGISPGLIKVALSPPVSRDNVALACVAGALGRLEGTSYDGADEINAA 1285
KVVV+GG+GFVGSRVC+ LVE+G V+SVS +G P +WA GE WVE+V W GD DL SGA A +SCVGVIG D + GNG V A A A V RFVYVSV+ V + +G +A +GYF GKK +E AIA+++ + +I+ P F+YGGDSF ++PPRV+ YG+ ++ LS P + +AG+ PG+ +AL PPV D+VA A +GALG L+ DG + I A
Sbjct: 22 KVVVLGGAGFVGSRVCKTLVESGCSVTSVSLSGVPP-EWAKGEPWVEQVQWTAGDAAKDDLKGTMSGAKACVSCVGVIGFDDEYLAAGNGPPTVEGAKMAKAAGVPRFVYVSVADAVRDNVGSIALKGYFAGKKESEAAIAEAYGADNSLIVCPGFVYGGDSFAISPPRVNQQYGSFVENTLSLAPFKALAGVLPGVAGLALQPPVCVDDVAKAVTSGALG-LQSGRVDGTESIKEA 256
BLAST of mRNA_A-nodosum_M_contig1020.7.2 vs. uniprot
Match: A0A7S1RWJ9_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RWJ9_ALECA) HSP 1 Score: 206 bits (524), Expect = 1.640e-58 Identity = 127/267 (47.57%), Postives = 163/267 (61.05%), Query Frame = 2 Query: 503 IVGLLAASEQAASARVIPRAAKVGEKVVVIGGSGFVGSRVCEMLVEAGAKVSSVSRTGSKPTKWADGESWVEKVSWNKGD---PTAGDLSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAASQAAKANVGRFVYVSVSHLVPEALGGLAFQGYFKGKKRAEEAIAKSFPSTGVIIKPTFIYGGDSFGLTPPRVSDGYGAGIDALLSFGPVRGVAGISPGLIKVALSPPVSRDNVALACVAGALGRLEGTSYDGADEINAAALK 1294
+VGLL+ A A + A G +V V+GGSGFVG R+CE LV AGA+V S+SR+G P +W KV W KGD P DL+ +GA AV+S +G IG D RGNG N AA + A A RFV VS S V ++ F GY +GK+RAE A+A FP++ ++++PTFIYGG+ F TPPRV+ YG+ ++ LL G RG+A +PG K+ALSPP S + VA A VAGALG+ GT D DEI AAA K
Sbjct: 43 LVGLLSPLAAVAGAPLAASAEAPG-RVAVLGGSGFVGRRICEQLVAAGAEVVSLSRSGGPPPGTG---AWASKVQWLKGDVLAPGGSDLAAAVAGADAVVSSIGSIGSGDDA--RGNGATNEAAVAAATSAQAKRFVLVSASSQVAKSGLDAVFGGYIEGKRRAEAAVAAQFPASSLVLQPTFIYGGEDFSATPPRVAGWYGSKVEGLLDTGLFRGLAAATPGFFKLALSPPNSAEEVAAAAVAGALGQASGTLADH-DEIKAAAAK 302
BLAST of mRNA_A-nodosum_M_contig1020.7.2 vs. uniprot
Match: A0A813JLA1_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JLA1_POLGL) HSP 1 Score: 203 bits (517), Expect = 6.730e-57 Identity = 131/286 (45.80%), Postives = 171/286 (59.79%), Query Frame = 2 Query: 431 PNESAGKIDRRSLLKVVPSTLAAGIVGLLAASEQAASARVIPRAAKVGEKVVVIGGSGFVGSRVCEMLVEAGAKVSSVSRTGSKPTKWADGESWVEKVSWNKGDPTAGDLSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAASQAAKANVGRFVYVSVSHLVPEALGGLAFQGYFKGKKRAEEAIAKSFPSTGVIIKPTFIYGGDSFGLTPPRVSDGYGAGIDALLSFGPVRGVAGISPGLIKVALSPPVSRDNVALACVAGALGRLEGTSYDGADEINAAA 1288
P+ + G RR L + L G++G + A +A P A G+KVVV GGSGFVG R+CE LV GA V+S+SR G P +W KVSW +GD + DL+ G+ AVIS +G IG SD RGNG N AAA+ AAKA V RFV +S S V +A F GY +GK+RAE A+A +F ++I+P+FIYGG+ F TPPRV++ YG ++ LL G RG+A +SPG +++ALSP S +VA A VAGA G +G G D I AAA
Sbjct: 76 PSPALGSASRRDSLGRLGLALGLGLLGPV---NSALAATASPLA---GKKVVVFGGSGFVGQRICERLVLEGATVASLSRGGGPPP---GAGAWASKVSWQQGDVLSADLASPVQGSEAVISAIGAIGSSDDA--RGNGATNEAAAAAAAKAGVQRFVLISASPDVAKAGLDAVFGGYIEGKRRAEAAVATAFAGNSLVIQPSFIYGGEEFSATPPRVAEWYGEKVEGLLGTGLFRGLAAVSPGALRLALSPLSSVGDVAAAAVAGASGAAQGM-LAGHDAIKAAA 349
BLAST of mRNA_A-nodosum_M_contig1020.7.2 vs. uniprot
Match: A0A813ALS2_9DINO (Hypothetical protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A813ALS2_9DINO) HSP 1 Score: 202 bits (513), Expect = 8.170e-57 Identity = 128/276 (46.38%), Postives = 168/276 (60.87%), Query Frame = 2 Query: 458 RRSLLKVVPSTLAAGIVGLLAASEQAASARVIPRAAKVGEKVVVIGGSGFVGSRVCEMLVEAGAKVSSVSRTGSKPTKWADGESWVEKVSWNKGDPTAGDLSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAASQAAKANVGRFVYVSVSHLVPEALGGLAFQGYFKGKKRAEEAIAKSFPSTGVIIKPTFIYGGDSFGLTPPRVSDGYGAGIDALLSFGPVRGVAGISPGLIKVALSPPVSRDNVALACVAGALGRLEGTSYDGADEINAA 1285
RR +L ++P LA + A SA + A + G+KVVV+GGSGFVG R+C+ LV GA+V+S+SRTG P+K D W V+W + D DL P +GA AVIS +G IG +D E +GNG N AA + AAKA V RFV VS S V EA F Y KGK+RAE A+ F + ++++P+FIYGGD F TPPRV+ YG ++ LL+ R VA SP +++ALSPP++ D+VA A VAGA GR GT + D I AA
Sbjct: 51 RREVLALLP----------LAEALHAGSAEALDSALR-GQKVVVLGGSGFVGRRICQRLVAEGAQVTSISRTGGPPSKVGD---WASSVAWKRKDVLTADLVPEMTGAGAVISAIGSIGSADDE--QGNGATNEAAVAAAAKAGVKRFVLVSASKDVGEAGVDAIFGPYVKGKQRAEAAVKGRFSDSSLVLQPSFIYGGDEFSATPPRVAGWYGEKVENLLATELFRAVASASPAFLRLALSPPLAVDDVAKAAVAGAAGRATGT-LESHDAILAA 309
BLAST of mRNA_A-nodosum_M_contig1020.7.2 vs. uniprot
Match: A0A7S3VWQ3_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3VWQ3_EMIHU) HSP 1 Score: 196 bits (498), Expect = 7.120e-55 Identity = 115/242 (47.52%), Postives = 144/242 (59.50%), Query Frame = 2 Query: 578 KVVVIGGSGFVGSRVCEMLVEAGAKVSSVSRTGSKPTKWADGESWVEKVSWNKGDPTAGD---LSPLFSGASAVISCVGVIGGSDAEMERGNGDVNVAAASQAAKANVGRFVYVSVSHLVPEALGGLA--FQGYFKGKKRAEEAIAKSFPSTGVIIKPTFIYGGDSFGLTPPRVSDGYGAGIDALLSFGPVRGVAGISPGLIKVALSPPVSRDNVALACVAGALGRLEGTSYDGADEINAAA 1288
KV V+GGSGFVGSR C+ LVE G V+SVS +G+ P W G+ W + V W K + T G ++ AV+S VG IG + GNG NV AA AA A R+VY+ V+ V +A L F GYF GK AE AIA F ++P+FIYGGDSFGL PPRVS GYG+ ++ LLSF P+ +A + PGL+KVAL PPVS + VA A A A G + +G INAAA
Sbjct: 23 KVTVLGGSGFVGSRCCKALVEKGVSVTSVSTSGAAPD-WCAGQEWAQSVEWRKNELTRGSRESVAEAIGSPDAVVSAVGAIGFDRQGLLLGNGVANVEAARAAAAAGAKRYVYIGVASEVADARDWLPGFFAGYFDGKADAEAAIADGFEGASTFVRPSFIYGGDSFGLFPPRVSAGYGSAVEELLSFPPLEALANVLPGLLKVALRPPVSVEAVAGAAAAAAQGEVSEPVLEGVTAINAAA 263
BLAST of mRNA_A-nodosum_M_contig1020.7.2 vs. uniprot
Match: A0A7S4QFS6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QFS6_9STRA) HSP 1 Score: 191 bits (485), Expect = 2.130e-52 Identity = 119/252 (47.22%), Postives = 158/252 (62.70%), Query Frame = 2 Query: 578 KVVVIGGSGFVGSRVCEMLVEAGAKVSSVSRTGSKPTKWADGESWVEKVSWNKGDPTAGDLSPLFSGAS---AVISCVGVIGGSDAEMERGNGDVNVAAASQAAKAN-VGRFVYVSVSHLV--------PEALGGLAFQGYFKGKKRAEEAIAKSFPSTG---VIIKPTFIYGGDSFGLTPPRVSDGYGAGIDALLSFGPVRGVAGISPGLIKVALSPPVSRDNVALACVAGALGRLEGTSYDGADEINAAA 1288
KV V+GG+GFVGSRVC++L E GA V+SVS++G+ P+ W GE+W + VSW D GD S L S A++SCVGV+G E+ +GNG+ NVA + AAK+ + R V+VSVS V PE GG YF+GK+ AE+A ++ I+KPTFIYGG SFGL PPRV+ YG+ ++ LLS +R +A ++PGLIKVAL PP + + VA AC ALG + DG D+IN AA
Sbjct: 51 KVTVLGGTGFVGSRVCKLLQEEGADVTSVSKSGTIPS-WCAGEAWTDGVSWKSADLLGGDESSLASAIGTPEAIVSCVGVVGFDREELLKGNGNANVAGFNAAAKSGGLKRSVFVSVSSEVAACEEKWLPEFFGG-----YFEGKRMAEKAALEAVEGNADSVCIVKPTFIYGGGSFGLFPPRVNAAYGSAVEELLSNKLIRVLADVTPGLIKVALRPPSAVEAVAGACAKAALGEKVKGTLDGTDDINEAA 296 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1020.7.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1020.7.2 >prot_A-nodosum_M_contig1020.7.2 ID=prot_A-nodosum_M_contig1020.7.2|Name=mRNA_A-nodosum_M_contig1020.7.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=361bp MMRRFMLFMGVVISCESFLVSHVHVRYPQRVLQVHTRRPGEVDESLIFIKback to top mRNA from alignment at A-nodosum_M_contig1020:121936..130074- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1020.7.2 ID=mRNA_A-nodosum_M_contig1020.7.2|Name=mRNA_A-nodosum_M_contig1020.7.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8139bp|location=Sequence derived from alignment at A-nodosum_M_contig1020:121936..130074- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1020:121936..130074- >mRNA_A-nodosum_M_contig1020.7.2 ID=mRNA_A-nodosum_M_contig1020.7.2|Name=mRNA_A-nodosum_M_contig1020.7.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1083bp|location=Sequence derived from alignment at A-nodosum_M_contig1020:121936..130074- (Ascophyllum nodosum dioecious)back to top |