Homology
BLAST of mRNA_A-nodosum_M_contig1020.6.1 vs. uniprot
Match:
A0A2T7PBM9_POMCA (Protein Abitram n=3 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PBM9_POMCA)
HSP 1 Score: 97.4 bits (241), Expect = 1.560e-20
Identity = 53/160 (33.12%), Postives = 87/160 (54.37%), Query Frame = 3
Query: 297 TPLPRQHPRHFNKDL----------PGCIVRQDFHCAVLPDVLGQEGVEQCLSFHPNGLSVVQLAPTHPAASGGERIVAVDFDAGGCNIQQSEIVKGKKKKGAMQLQSSTVLCSITTNSGKQYKVCTGIGGELMQANRALLDDPGLLSEDPLGRGWLAIV 746
TP R+ F++DL P +V + F + +EG + C+ H N + +V LAP+HP +++ V+F+ G N ++ V GK K+GA L S+ LCS++ G Y VC+GI G+L++ N AL+ P L++E+PL G++ I+
Sbjct: 6 TPATRKSEEDFSQDLIQKYESSDERPPTVVDRYFKKKYGVSMQKKEGEDICILIHSNRICIVTLAPSHPILEKKKKVTGVNFNVGKVNRLDNK-VSGKGKRGAQWLGPSSTLCSLSCEDGSIYDVCSGIKGQLIEVNEALIHSPHLINEEPLNTGYIGIL 164
BLAST of mRNA_A-nodosum_M_contig1020.6.1 vs. uniprot
Match:
UPI0003598531 (protein Abitram n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003598531)
HSP 1 Score: 83.6 bits (205), Expect = 1.360e-15
Identity = 47/145 (32.41%), Postives = 80/145 (55.17%), Query Frame = 3
Query: 312 QHPRHFNKDLPGCIVRQDFHCAVLPDVLGQEGVEQCLSFHPNGLSVVQLAPTHPAASGGERIVAVDFDAGGCNIQQSEIVKGKKKKGAMQLQSSTVLCSITTNSGKQYKVCTGIGGELMQANRALLDDPGLLSEDPLGRGWLAIV 746
Q + K PG +V + F D+ G++ +Q + H N + VV +A +HP S + ++ VDF+ G N +++ GK K+GA L + VLC +T + +Y + + G+L++ N L+ P LL+E PLG G+LA++
Sbjct: 5 QQSTNLEKPPPG-VVERYFKKHFRIDLKGKKYEDQVVLTHSNRVCVVCIAESHPICSEKKEVIKVDFEVKGSNRMDNKM-SGKAKRGAQWLGPTAVLCEVTCSDESKYTLYCCVKGQLVEVNENLITKPCLLTEKPLGAGYLAVM 147
BLAST of mRNA_A-nodosum_M_contig1020.6.1 vs. uniprot
Match:
A0A196SGP2_BLAHN (Protein Abitram n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGP2_BLAHN)
HSP 1 Score: 80.5 bits (197), Expect = 7.430e-14
Identity = 46/154 (29.87%), Postives = 82/154 (53.25%), Query Frame = 3
Query: 348 CIVRQDFHCAVLPDVLGQEGVEQCLSFHPNGLSVVQLAPTHPAASGGERIVAVDFDAGGC--NIQQSEIVKGKKKKGAMQLQSSTVLCSITTNSGKQYKVCTGIGGELMQANRALLDDPGLLSEDPLGRGWLAIVRLKPRDLRRLQDALGVSDD 803
C++ + + D G +G + + H N + +V LA H + G++ V V+F N+ ++E V+GK+KKG + + +T+LC IT + G YK+ + I L + N LL++P LL+E P G++ + K D+ +Q +L + D
Sbjct: 83 CMIDRYYTQLYAADTNGCKGNDVSICMHSNTICIVSLAFGHEILTKGKKCVKVEFGKSRDHHNLLENE-VQGKRKKGGIWVDETTILCEITCDDGSVYKIPSCIRARLAEVNSRLLEEPNLLNEKPRTDGYIGLFIPKVGDVMNIQKSLLTASD 235
BLAST of mRNA_A-nodosum_M_contig1020.6.1 vs. uniprot
Match:
D8M2A0_BLAHO (Protein Abitram n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M2A0_BLAHO)
HSP 1 Score: 76.6 bits (187), Expect = 1.920e-13
Identity = 44/129 (34.11%), Postives = 70/129 (54.26%), Query Frame = 3
Query: 429 HPNGLSVVQLAPTHPAASGGERIVAVDFDAGGCNIQQSEIVK----GKKKKGAMQLQSSTVLCSITTNSGKQYKVCTGIGGELMQANRALLDDPGLLSEDPLGRGWLAIVRLKPRDLRRLQDALGVSDD 803
H N + +V LA H + G+R V V F G ++VK GK+KKG + ++ ST+LC IT + G YK+ I L++ N LL++P LL+ P G++A+ K D+ +Q +L S++
Sbjct: 2 HSNTICIVSLAFGHDIITKGKRCVKVVFGKG---KDHRDLVKNDVSGKRKKGGIWVEESTILCEITCDDGSVYKIAACIRARLLEVNLRLLEEPELLNTKPRTDGFIALFAPKVADVMNIQKSLLTSEE 127
BLAST of mRNA_A-nodosum_M_contig1020.6.1 vs. uniprot
Match:
A0A1J1I4P4_9DIPT (CLUMA_CG008231, isoform A n=1 Tax=Clunio marinus TaxID=568069 RepID=A0A1J1I4P4_9DIPT)
HSP 1 Score: 76.6 bits (187), Expect = 4.870e-13
Identity = 46/136 (33.82%), Postives = 74/136 (54.41%), Query Frame = 3
Query: 396 GQEGVEQCLSFHPNGLSVVQLAPTHPAASGGERIVAVDFDAGGCNIQQSEIVKGKKKKGAMQLQSSTVLCSITTNSGKQYKVCTGIGGELMQANRALLDDPGLLSEDPLGRGWLAIVRLKPRDLRRLQDALGVSDD 803
G E + + +H N + ++ LA +H A G IV + ++ G C+ ++ VKGK KKG M LQ T L IT G +YKV + + G+L++ N L + LS + G G++AIV +KP + + + +L D
Sbjct: 46 GNENEDHLILYHSNRVCLIGLAQSHIAFKKG--IVGITYNIGNCDRSLNQ-VKGKHKKGGMNLQPLTTLAIITCKDGSEYKVLSCVTGKLIETNDRLKGNLNKLSIE--GSGYVAIVLIKPENCEKAKSSLVSEKD 176
BLAST of mRNA_A-nodosum_M_contig1020.6.1 vs. uniprot
Match:
A0A0A1U2H6_ENTIV (Uncharacterized protein n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=A0A0A1U2H6_ENTIV)
HSP 1 Score: 73.9 bits (180), Expect = 4.820e-12
Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 3
Query: 402 EGVEQCLSFHPNGLSVVQLAPTHPAASGGERIVAVDFDAGGCNIQQSEIVKGKKKKGAMQLQSSTVLCSITTNSGKQYKVCTGIGGELMQANRALLDDPGLLSEDPLGRGWLAIVRLKPRD 764
+G +Q + H NGL +V LA THP + VA+ N Q+ VKG+ K GA ++ TVL ++ + G +YKV G L++ N +L D P LL + G+G++AI++ P +
Sbjct: 33 DGSDQFIFLHSNGLVLVGLARTHPVCKAQDIKVAI-------NTQKENQVKGRHKFGAQNVKPKTVLITVVAD-GVEYKVHALTSGRLLEMNESLTDHPELLKNESEGKGFVAILQKNPNE 145
BLAST of mRNA_A-nodosum_M_contig1020.6.1 vs. uniprot
Match:
A0A1B6C9I2_9HEMI (Protein Abitram n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6C9I2_9HEMI)
HSP 1 Score: 73.2 bits (178), Expect = 8.390e-12
Identity = 40/124 (32.26%), Postives = 68/124 (54.84%), Query Frame = 3
Query: 417 CLSFHPNGLSVVQLAPTHPAASGGERIVAVDFDAGGCNIQQSEIVKGKKKKGAMQLQSSTVLCSITTNSGKQYKVCTGIGGELMQANRALLDDPGLLSEDPLGRGWLAIVRLKPRDLRRLQDAL 788
C+ FH N + V+ LAP+HP + + IV +DF + + V GK K GA LQ + L + + +Y + + I G+L++ N L+ +P LL ++P+ +G++AIV R + +D L
Sbjct: 40 CILFHSNKICVITLAPSHPIIAEKKDIVKIDFKVSSNVDRLTNKVSGKGKHGAQILQPLSPLFFVECSDKSKYTMYSCISGKLIEINDNLVQNPNLLVQNPMDKGYIAIVLPPIRHGEKYRDQL 163
BLAST of mRNA_A-nodosum_M_contig1020.6.1 vs. uniprot
Match:
C5KHC7_PERM5 (Uncharacterized protein n=2 Tax=Perkinsus TaxID=28000 RepID=C5KHC7_PERM5)
HSP 1 Score: 62.8 bits (151), Expect = 7.900e-8
Identity = 44/133 (33.08%), Postives = 70/133 (52.63%), Query Frame = 3
Query: 399 QEGVEQCLSFHPNGLSVVQLAPTHP--AASGGERIVAVDFDAGGCNIQQSEIVKGKKKKGAMQLQSSTVLCSITTNSGKQYKVCTGIGGELMQANRALLDDPG--LLSEDPLG-RGWLAIVRLKPRDLRRLQD 782
Q+G Q + H N + +V APTH + G ++ +V + G Q V GK+K+GA+ + +TVL +T +GK Y +C I G++++ N L D L++ D G++AI+ LK L RL D
Sbjct: 60 QDGHHQYVHRHSNNIFLVGAAPTHVMFTENPGVKVKSVKYREGMTTTQ----VTGKRKRGAISVNPTTVLADVTMENGKVYPLCACIRGDIIETNTRLCGDEAAKLMTPDSCETEGFVAILLLK---LTRLND 185
BLAST of mRNA_A-nodosum_M_contig1020.6.1 vs. uniprot
Match:
A0A8J8NJL3_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NJL3_HALGN)
HSP 1 Score: 61.2 bits (147), Expect = 2.540e-7
Identity = 38/119 (31.93%), Postives = 63/119 (52.94%), Query Frame = 3
Query: 408 VEQCLSFHPNGLSVVQLAPTHPAASGGER--IVAVDFDAGGCNIQQSEIVKGKKKKGAMQLQSSTVLCSITTNSGKQYKVCTGIGGE-LMQANRALLDDPGLLSEDPLGRGWLAIVRLK 755
++Q H N L + L+P H A + I V FDA Q+++ GK K G +L T++C I+T +GK YKV + +G L++ N+ ++ +P LL++ G+L I +K
Sbjct: 77 LDQFYFIHSNKLVLFGLSPRHEAIVNNSQNPITGVSFDANKKQRSQNKVT-GKSKSGGTRLDPRTIVCEISTQNGKVYKVRSFVGNAYLIEMNQRVVQNPQLLAQKCESDGYLGIFIVK 194
BLAST of mRNA_A-nodosum_M_contig1020.6.1 vs. uniprot
Match:
A0A7J6MZN6_PERCH (Uncharacterized protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MZN6_PERCH)
HSP 1 Score: 59.7 bits (143), Expect = 7.840e-7
Identity = 43/132 (32.58%), Postives = 70/132 (53.03%), Query Frame = 3
Query: 402 EGVEQCLSFHPNGLSVVQLAPTHP--AASGGERIVAVDFDAGGCNIQQSEIVKGKKKKGAMQLQSSTVLCSITTNSGKQYKVCTGIGGELMQANRALL--DDPGLLSEDPLG-RGWLAIVRLKPRDLRRLQD 782
+G Q + H N + +V APTH + G ++ +V + G Q V GK+K+GA+ + +TVL +T ++GK Y +C I G++++ N L D L++ D G++AI+ LK L RL D
Sbjct: 49 DGHHQYVHRHSNNIFLVGAAPTHVMFTENPGAKVKSVTYREGMTTTQ----VTGKRKRGAISVNPTTVLADVTLDNGKVYPLCACIKGDIIETNTRLCGGDAAKLMTPDYCETEGFVAILLLK---LSRLND 173
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1020.6.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 15
0 1 Expect = 1.56e-20 / Id = 33.13 Expect = 1.36e-15 / Id = 32.41 Expect = 7.43e-14 / Id = 29.87 Expect = 1.92e-13 / Id = 34.11 Expect = 4.87e-13 / Id = 33.82 Expect = 4.82e-12 / Id = 34.71 Expect = 8.39e-12 / Id = 32.26 Expect = 7.90e-8 / Id = 33.08 Expect = 2.54e-7 / Id = 31.93 Expect = 7.84e-7 / Id = 32.58 Sequence A0A2T7PBM9_POMCA UPI0003598531 A0A196SGP2_BLAHN D8M2A0_BLAHO A0A1J1I4P4_9DIPT A0A0A1U2H6_ENTIV A0A1B6C9I2_9HEMI C5KHC7_PERM5 A0A8J8NJL3_HALGN A0A7J6MZN6_PERCH Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Seed ortholog 126957.SMAR012300-PA Preferred name FAM206A PFAMs GCV_H Model size 999 Max annot lvl 33208|Metazoa Hectar predicted targeting category other localisation GOs GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0016604,GO:0016607,GO:0030425,GO:0031974,GO:0031981,GO:0036477,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044463,GO:0044464,GO:0070013,GO:0097447,GO:0097458,GO:0120025,GO:0120038 Exons 5 Evalue 2.71e-20 EggNOG OGs KOG3266@1|root,KOG3266@2759|Eukaryota,39WMQ@33154|Opisthokonta,3BN76@33208|Metazoa,3D1ST@33213|Bilateria,42091@6656|Arthropoda Ec32 ortholog description Glycine cleavage system H-protein Ec32 ortholog Ec-01_011490.1 Description Glycine cleavage H-protein Cds size 678 COG category E
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866385.1463778-UTR-A-nodosum_M_contig1020:112504..112635 1680866385.1463778-UTR-A-nodosum_M_contig1020:112504..112635 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig1020 112505..112635 + 1680866385.2131133-UTR-A-nodosum_M_contig1020:121626..121816 1680866385.2131133-UTR-A-nodosum_M_contig1020:121626..121816 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig1020 121627..121816 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866385.158793-CDS-A-nodosum_M_contig1020:112635..112793 1680866385.158793-CDS-A-nodosum_M_contig1020:112635..112793 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1020 112636..112793 + 1680866385.1685069-CDS-A-nodosum_M_contig1020:118575..118779 1680866385.1685069-CDS-A-nodosum_M_contig1020:118575..118779 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1020 118576..118779 + 1680866385.1786218-CDS-A-nodosum_M_contig1020:120185..120330 1680866385.1786218-CDS-A-nodosum_M_contig1020:120185..120330 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1020 120186..120330 + 1680866385.1865976-CDS-A-nodosum_M_contig1020:120672..120750 1680866385.1865976-CDS-A-nodosum_M_contig1020:120672..120750 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1020 120673..120750 + 1680866385.197881-CDS-A-nodosum_M_contig1020:121533..121626 1680866385.197881-CDS-A-nodosum_M_contig1020:121533..121626 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1020 121534..121626 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1020.6.1
>prot_A-nodosum_M_contig1020.6.1 ID=prot_A-nodosum_M_contig1020.6.1|Name=mRNA_A-nodosum_M_contig1020.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=226bp
MSGSEAEGKKGTKRPRSTDALTSMEATEDREQPSAGKKAANKSAGNRVPQ back to top mRNA from alignment at A-nodosum_M_contig1020:112505..121816+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1020.6.1 ID=mRNA_A-nodosum_M_contig1020.6.1|Name=mRNA_A-nodosum_M_contig1020.6.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9312bp|location=Sequence derived from alignment at A-nodosum_M_contig1020:112505..121816+ (Ascophyllum nodosum dioecious)CCCGGTATCACTGCACACCCACAACAGATACCTACCCGACTGGTACAAAA
GTCCGGCTGAGAAGTCCGATACAGAACCCGTTTTGACGAGGTTTCTGGGC
GCAAGTTGTCATCCTTCTAGCGAATACGCGG ATGTCGGGATCGGAGGCAG
AGGGAAAGAAGGGAACCAAGCGACCTCGCTCAACGGATGCCCTAACCAGT
ATGGAGGCAACAGAGGATCGGGAGCAGCCTTCAGCAGGAAAGAAGGCTGC
CAATAAATCTGCTGGCAACCGCGTTCCGCAATCATTTAC GTGAGTTTCGC
GAACTTTATGGGTGAAGCAAACGTTCCGAGACGAAAGAGATGACGATGTT
TTTGTGATCGTGCGATCGTTGGGTTTCTTGTTGCGATATAACTTTATCCT
TTTATGAAGGTCTAGGTACGTTCTGATTTTTCTTTAAACCATATTACTGC
TGTACAGTACCGTAGCCCGGAACTTCAGGGACTGGACTAGTCGCCTTCCG
CCAGACGGGACTGTGAGAAAACTCGTTCCGTTTCGCCATTATTTTTTACT
AAAAAAAAACGTTTGAGAGAGAGATAGAGAAGAATACAAAAAAACAAGAA
GTGCACAGCTAGTCGGTAGCTTTTCGATCTAGGCCCAGGGGGCGTGACGG
CCGCCCACGACAGGCTGGTGGCGTCTCTTTAAAGAAAAATCCGTTCGGGT
ACTAGAAGGGTTGTGGAGTGGTTGTGCTGTCGCCTGTAGAGGTTGTTAGG
CGTACAGTCTTTGATGTTCCATGCTTGCCACAAACTCTTTTTCCCCCTGA
CTGGGGGATGCTCAGAAGGTCTAGGTGCATTCAGATTTTTCTTTAAACTC
TATTTTCAACAAATTCCCAAGTGATCAGTCCGGCTGGTTCAAATGATTAG
TGAGCGCGCATTGAAGGCCCAGAGGGACAAAAACCACTAATGTACTTCTC
TGTCCCCGCCTAATGTGAGCCCTTCGGGCTCACTAGCGCTTCTGCTCTCA
TACACAACGACACGAACATGGACTTGCCAACACCCAACGTCGAGGGTTAC
AAGGGTGGCAACACCTCGGCTTGCTACCAGCAGCTACTGCAGGTCACCCG
GATCTGTGTGGTCTGTAGTATGCATGGGTGATTGCTGCATCAAGACTGTA
CGGTGTTGAGTCAAAATAGGGTTCTGCTACTGGCAACAAGTTTCGCTACC
AAGTGAAATTATATTTATGTCTGCATCCGAGCCACATCCACACGAAAAGC
TTCAGCTGTTCTCCATGCACGCAGGCAAAGGCACCAGGTCATGTATTGTG
TAGACTGCTGTAGAGCGAGCGCTGCGCCCCTCGCTTCCGGTAGCGCGCAA
AAATCTGGTTTCTTCCTCTCCCACAAGGTGCTGCACAGATCCAATATTAC
ACGTTACTACCATAGGTTCAAGTACATTCAACACGAACTTGCCACGCATG
TGTTTACAGCAAGTATCTGCTGTGTGATACGATTTGGCACGCCAGGTATT
TTGGGGGGGGGTCTATAAACATATTACAGCAGTCCTAATATTTACATATA
GTAGTAGGATCGTTGCATGGGGTCAGCACGTGTTCGTTTTTCCAATACGG
ATATCACCCCACAAATTGTTGAAGTATGTACCTCTTCGCGCAACTCCTTG
CAGGTGGAGTTCGGGTTCTTTCCTTATCATGCCCTATACGACTATAGATC
AGACTGGACCAAAAAAAAAATGAAGAAAAAATGAAAAAAATATATCAATC
AAATGATCATTAAAACCCACCCGTATTCGCAGAAGGGTCAATAGGCCAAA
TATTTTGTACGAGCTACATCTAGACTGATCGTGTTTATAAAGAAAAATCT
GAACGCATCTAGACCTTCTGACCATCCCCCAGTCAGGGGGGAAGATGTCA
AAACGTTTAGGTGGGATCATAGGCTCCAAAGACCAAACCTCTTCATGGCT
TCCTTGTTTCTGCTTTGGTGTCCCTACACGGCGATTGATGCAAGTGTACA
GTATAACGGTGGGCTTTTCCCCGATATTATACTGTGACACTATGTGACTA
CATTGGGGAACCCTTCGAATACCATTAAGAGCTTTTGTCCCTACAGCCAA
TGTTCCCACCTAAACCTTTTGACATGCTTAGAAGGTTTAGATGCGTTCAC
AGACATAGGCAGTAACGTTATCCTCCTTCGGCTCATCGCGCGGATACTTC
TGTACTTTTGTGTTGACAGTGTGGTACTTATGGATTCTCCTAAAGTGTTT
AATCTTTCTACTCTCCCACACGCCATTTTCTGGCCATTTTCGATTCAACG
GTATAGTACACACAAACAGAAATGCTGTACAACTGTACACCTATTCTTCA
GCGTTCCTGGTAGTAGGTACAGTATAGTTGACCATGTATGTATAGCGGAT
AGGTTCATGTCGGATGTGTTTTGGTTCTCACCTCCTTGCTGGAAATACCA
GTGCGAGTTATTTTTTGTAGTAATCTTACAGATCAGGACAAAAAAAGAAC
GCACAACAAGCAGAAACTTCGATGTATCTATTATGATCGGCACTTTCGCA
CACTGTTTGGAGAAAATCTGAACCTTCCAAGCATCCACATAGTAACCTTC
CGGGGGGTTCGTGCCGAAATACTTGGTTTGGAACTGGCTGGGAAAACGAA
ACCTCCACGTGGGATTTATAATATTAATAATATTAATAGTATTAATAGTT
GGGTTAACATTCCCCAATGTTTGCCCGACAGGGTCAACAGTGTCATTATC
GTGAAGAAACCCAACGGAGTTACTGTACACTGATACTAATCGCCATGTGC
ATACACCAACCTGCCGAGCCTTAATCTAACGAAATGTTTGTATGTATTTG
TTTGGGTTTCGGTTTGAGTGCTAATGGCGGAGTGGTGGATGATTGTTGAG
TAATTATACAGTCGGTAGCATTGAATTCCCGATAGGGGTTCATCTATGTC
CTCGAGACGCTGGTGCTTCGTACCAGGTATTCAGTAGACGTAACGTGCGC
GGCAGACACAGCAGTCACATTTACAGAAGCTTGAATCGAGTCACGAGCTC
TATCGCCTTATCCTCTTCTCTCACTCGTCAAAGCCCACGAGAACGCACGC
ACACGCGCGCGCGGTTGATGGAAGCAGTAATAGGGGACTGACTGCCCATG
GCCATGACCATCGTGACCATCATGACCATCAAGCTGTTCACACAGAGGAG
CAGGGCCCCGGCAAAACGCATTCTAGATGTCTAAAATGTCTCCAACACCA
TGCAGTCAGTCGCTGTACGCATGTCTCATTCGCGCGAGCTGTACGACACA
ATCCCTACAGCACCCTGCAGCGGGTCACAGTTGACATTGTAAGGTTGCAG
AGTTGCGTCCCTATTTCAGCAAAAACCTACGGAGTACTCGTATTATGGAA
TCAAGCAGGCATCAAGCGCTTGCTGGTCTCAAATGCGTGTGCAATATGTG
TGCAAGTTGCCTGCAACAACTTGGGTGTTACGGATGGTCTTGTGAAATGA
CGTGACCGATACTACAATCTAACACCTGCTCCCTGCTGTCCAACCTCCTC
GCCGGAACGCGATATGTAAAACTCTTGAGGCACGATAACTGATAGCAATA
GTGGGCTAATGTACCTCGTTCACTCGCCTACAACGTTGGATAGGTACAGT
AATGTACTGTAATGCATGTCGGACTATACTTAGGAGCTGAAGATAAAGAT
CTCGCTCGGCTTCAAGAAAGTCTATGTTTTCTCACTAATTCGAAGCATGT
GACATGTTTTTGTGAAAATAGCGAGAAAAACGCGTTGAGTTTCCCATAGA
CTTCCTTGTTCCTTGTTCCTTTGTTAGAAGAACATTTCAAGTAACCTCGT
GATTGTCCGGCCGCTTTTTTAAGTGCCCATTGACCATGGAACGAATTGTG
TTTTTTTTCTTTGGTATTTAAAGCGACAAGACAAAACTCGTACTGTAGTA
CTTTAGAACTAATAATAGTGGAAGTACAGTATTATAGTATTAATACTACA
CAGCAGTATTTAGACCCTGGCGTTGCCTCGAGCACACGATTTTTCGACCG
TATGTAGAGGGGTTGATGCGTGTTGCATGTGCGTGCATTGACCCCCCTGC
TTGCTTGCTGGGACTACGAGTGTTTTGGTTGTTTGCAAGTTGGACAGAAG
TAATTTGAAGAGAGGAATTCGAAAAATCGTCGACAGGATGACTATGCTCA
CAAACAAAGCTGGCACTTCGTGTTCAAGAGCATTTATGGCAAACGCAGAG
GTCACACGAAGCGTTTCGAATCGTTTACGGGAGCTCGAATCGGGTCATTA
TAGACAACGGATATCTATGGTTTACAGGAGCTCGTCGTAGTTCACCAAGA
ATCTGAAACACTTACCGTTTGTTGGCACCGGGGCAGTGGTACAGGGGTTA
AGACTGACTGACCCGTAAACAGAGAAGTAGCAAGGCTCGAGGACACTCTT
TACTGTTTACTGTATACATGCTGCAACGCCACGTGATCAGTCAATGTGCC
CACGCCTTGCCTCGTCGACGCGAGCTACGCGCGACACTTCCTACACCAGT
CGGATGTTTAAAGAAAAATCTGAATGCACCTAGACCTTCTGAGCATCCCC
CAGTCAGGGGGAAAAAATGTCAAAACGTTTAGGTGGGATCAATAGCTGAA
AATACAAAACCTCTTCATGGCATTTAAACGGGTTCCCCGATGGTAATAAC
ATTGGGTCAACAGTATAATGTCGGGGAGAAACCCACCGTCATACTGTACA
CTTACATTAATCGCCATGCAGGGACACCAACAAAAGGGAAGACAAAACAA
TACATCATCAAACAATAAAGACAAATACAATACAATAATTGAAACACGCA
CAGCAGAGGACCATGATGATGAGAATCTTCATAATCCAGAAACAGTACAA
GACGCCGTTATTCACCTGGAAGTAGACGAAGAGCAGTAGGCGATCACACA
AGGCGGTAAGAGGCAAGCGGAAAGAAGTGGGTTCCTCGCTCCATACTTGT
CAGGGCTACGACACACAGATGCTCCTCATGCATGGTCTCAGCTATGGTCC
CGCGTTGACCAGAAACACAAAGGAAAGAGCATATGTCTGCCAAAGTGACC
AAGAGTTGTTGTAAGGTTGCGTAGTTTTTGCCGCTTCACAAAACAAAAAG
CAGAATGGACTAGGCTCTATTAATAGGCATCGAGCATGAATTGCCCTTCT
AAGAGCTTGAAGTACAACGTACAAGGCACAAAAACATTAGGATAATTGTA
TGATGGTGGGATGCGACATCATGTCGCGTTCACCGGATAAACTAACTTAT
CGGGCGACGAATGCATCTGCTTACGACGGGAAATGTGAATTTTAATTTCA
TGTTTTGATCAGCTGTGCCCAACGTTAAACCGATAAACTTATTTCAAGTA
CAATATGTTCGGGAGTTGAGGAGGGGAGGTTGGATCAGTATCCTTGACCA
ATCCCACCTGACTCGGCCGAAACATGAATGCCCGAAAATGTCCGGCAAAG
GCTGTCTCTATGCATGCGTCGGGAGGAGTCCCTCATTTCTTGTATATTCA
TGAAATGAGTGCAAAAATCCCGAAAACCCATGGCGGCAGCTTCTTGGGTG
GCCCATCCCGCACGACACGTTTTTTTACGATTGTTGTTGGCAACACTCGA
TGAAGAAGGGGCCCTGGAAAGAGTTTCGTTGATGAAGCAAAATGGTTACT
ACAGCACGTAGTTAGACCTTTGGATTGCCTCAACAAAGAGAAAGGTCGCG
TAGTGTCGTTTGTGTCACGTCAACGATGCTGTCGCAAATATGCCCAAGAG
TCTCAACGCTTCAAGACATACCTCTGCAGCGCTCGAGACGAGCCCCACCG
TGACCTCATCGCCATTCTACCGCGCACTTTTCATTTGATATTTTGTTCAT
GATGCGGAATGTTCATATTCGGTGCAACTCGGGGAGAATGTCTAATACAC
GAACTGTTTCGCTCCAGTTTATCTGCTTTGGTCCAAATAGACACTAAACT
AATAATACTGTAACATGGCCATTGAACGTTGAATTTGCCGGCACTTGCAA
CCCCCTATACCTTACAAGCAGGACAATAACTCCACTCCCTCGGCAGCATC
CGCGCCACTTCAACAAGGATCTGCCGGGATGCATCGTCCGGCAGGATTTC
CACTGCGCTGTCCTCCCTGACGTTCTAGGGCAGGAGGGTGTCGAGCAGTG
CTTGAGCTTCCATCCCAACGGGCTCTCAGTCGTTCAGCTTGCCCCGACGC
ATCCTGCCGCCAGCGGTGGAGAGAG GTGCGCTTCTAACCCACGCACCTTT
CTTGCAGTTTGGGAGACATGTGCACATGCCACCCTTTTATTTTTAGGGAA
GGTCGAGAATTATGGTGTCGTCTTTCCTTAGTAGCAATTCCCTGTGTGTA
CCCTGGCTCGCGAGTTTAACCGCAAAAAAAAAAAAAAAAAAAGGAACTTA
AATCGTCGATCAAACAACTATTATCGACATTAGTACTATCCTCGTAACTA
TGTTTTACAGTGGTTATGTTAGGTTATGATTGGTGGCTGTGCATGGTGAT
TAATATAAGTGTACAGCATAACGGTGGGCTTCTCCCCGACATTATACTGT
TGACCCAAGGTTACTACCTTCAACATGCCCACTTCATACCTATAGTGGGT
GTGGGAAAGAGAGGCGAATATTAATTGTTCCATGGTGACCTGCCAAGGCA
GCACTCGTTCGGAACTACCTTGAGATTTACTGGCCCTGTGCCGGCGGACT
CTCGGCAGTGAACGCCATCGGTACGCAGTTGCGTGACCCGATACACTCGG
GACTGACCCGATGGCGTATGGCGGTTTCATAAATGGACGCCGCCGCGGAA
CTTGGGAGGAATCCCGTAAGTAAGCACCAGATTCAGCCTGAGTATAGAGA
TGATTAGGCTGCCGCGGGACGGGACGGCTGAACCCGTCTCGCGAGACCAA
ATTCTCAGGCACGCACGGGGACAGGGGAATATTCATTTTCCTTGTTCAGC
TGACCACGAACAGGATGATTAACCTTACCCGGTTGATCCATACTCTGCTA
TATGTGATGACCATACATACATACATACATACTACCATTGGGGAACCCAT
TTAAATACCATGTAGTGGCTTTGTATTTATAGCCTATGTAATGTATATTA
CTACCACCATGTGTGATGGTGTACTACATTGTCTTTGTGTGTTTTTAATG
TTTCTCTGGTGTCCCTGCATGGCGATTAATGTAAATGTACAGTTTAACGG
TGGGCTTCTCCCCGACATTATACTGTTGACCCAATGTTATTTGCATCGGG
GAACCCGTTTAAATACCATGAAGAGGTTTTGTATTTGCAGCCTTTGATCC
CACCTAAACGTTTTGACATTTTTTCTCCCCTAACCGGGGAATGCTCAGAA
GGTCTAGGTGCATTCTGATTTTTCTTTTAAACTCATACAAGAGTCTGATT
ATATGATTCGAACCGTAGACTGAGGGTGGAGGTCATGAGTCCTACTTAAG
GTAGATACGGCATCAGGTCATGGATATATATATCAAGGCTTGACGGATTA
TTTGCAAGGGGACATACGGACAGGCTGTATTTTCTTCTCCTTTGAACTTT
TGATCGACGCGGTGCTTTCCTGCACCTCCCTGACCGCTTCGGCGCATATG
CTTCGTCCCCTCGATGTTGTCTGTTTGGCAGAATAGTAGCCGTTGACTTC
GATGCCGGTGGCTGTAACATCCAACAGTCTGAAATCGTCAAGGGAAAGAA
GAAAAAAGGGGCGATGCAGCTGCAGTCGTCGACGGTGCTCTGCAGTATCA
CAACAAATAGCGGAAAACAGTACAAG GTACAGTATGTCACAAGAAGAAAA
TGGCATCACCTAGTTTGTGCCCAAGTCAAGCATATTTTGAGAGTTGTAGC
CAACTGCGGAGAATCCCGGCGGTTAGCATCAAACTCGTCGTCTACCGAAC
ACCGGCCCCCCGTTCGTGTAGCGACTAACGTCTTTCACAACTGGAAATTG
CGGGGAGTTGGCTTCCTCAGTCTGCGGGGTAGCCTCCGCTCGGTCGATCC
ATTTGACAGTGACAGGAAAAACGTGAGATCCATTTGTAATCTTTTCTACT
CACCACCCGATCCATGTCCAACATCATGTATAAAAGCTTGCTTCACTGGT
ATATTTGCTGGACTGCAGGTTTGCACCGGAATCGGTGGGGAGCTGATGCA
AGCCAACAGGGCTCTTCTTGATGACCCCGGTCTACTGAGTGAAGAT GTGA
GACCGTACAGATAAACTCGTCGCAGCAGTCCCCTCGCTACCGTGTATCAT
CCGCATCATCTGCTTGGACGCAAAATCGTTTTCAAGCGCTTCCCGCCCTC
CTCACGATCGTTCGGGTCCCTCATTCCCAAGAGTTCCACGTACTGCTATT
TTGCTGAAGTACGATTCCTGGCTTACTGAAAACAGATAAAACACACTGCG
GTTTTTGTATGGCCAATAACTTCCCGCCAACTTGTTTCTGGTTTGTTTGG
TTTATACTCAGATGTAGTACAAATGCTATGTTGAAAGACTCCTTCCCGCC
CATCGGTCCCAGGTTTTCGCCCTGAGGCCCGAGTGGTCGGGTAGGTAACC
TGCACACCTGCTAGTGCGGAAGTCGTGAGTTCGATTCTTACCATCAGAAT
TCGTGTTCTTTCTTTCGTAGTGGAAAAGCTGAGAACGTGAGTAAGTAAAA
TTCAACCATTGGTTGACGAGTTGTAAGAGTGTTGAACTTACACCGCGATA
AAAATTCGTAAGGCGTGAACCGGGGAGAGATGCGAAGATTTTTAGTGACC
ACAGGTAGGATGGCAAAGTTGGGGCCCATGGGCTTTAAGTGAGGGAAAAA
AAAAAGTCTCTTGTTGAGCTTGGGAATCTCAATATAAGGTGCGGCAAAGC
CTCCACGCCTTTCACCACAATGAAAGTTGTGCACCGTTTCGAGACCGCGT
GTGGTCCCCAGCTCTACAAAAATAACATCCTACACTCGATCGCGCCCGCC
TGCTGTGCTCTTTTTCTCGGCGCCTCCAGCCATTGGGTCGGGGATGGCTT
GCGATTGTTAGACTCAAGCCGCGGGACCTTCGCCGTCTGCAGGACGCCTT
GGGGGTCTCCGATGATCGATAG GGCAGCCATCAAAGATGGCGTGAAGGGG
CTCCACTACAAAACCTGGCATACAGTAGCTCTATATGGAGGCATGACCTC
TACTCGCACTTCTTTGCTGAGCTTCTTGCCTTCCTAAAAAAATATCACGG
AGAACGTCGTGAATCGGTAATGTACCTGTCTTCCCTCGTGCCCTCCTGCT
GTAGAGCCACCG back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1020:112505..121816+
>mRNA_A-nodosum_M_contig1020.6.1 ID=mRNA_A-nodosum_M_contig1020.6.1|Name=mRNA_A-nodosum_M_contig1020.6.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=678bp|location=Sequence derived from alignment at A-nodosum_M_contig1020:112505..121816+ (Ascophyllum nodosum dioecious) back to top