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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 681 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 681 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866380.0026224-CDS-A-nodosum_M_contig102:138456..138612 | 1680866380.0026224-CDS-A-nodosum_M_contig102:138456..138612 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig102 138457..138612 + |
| 1680866380.0118215-CDS-A-nodosum_M_contig102:139405..139930 | 1680866380.0118215-CDS-A-nodosum_M_contig102:139405..139930 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig102 139406..139930 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig102.24.1 >prot_A-nodosum_M_contig102.24.1 ID=prot_A-nodosum_M_contig102.24.1|Name=mRNA_A-nodosum_M_contig102.24.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=227bp
AVAVAAETGTVAVKIGASNSGERANDVTAQLAEAIKAKEALEEKLTEFAK
YTGMKEKEMMTMKERMAAMEESLRVAKNELATIRAAQEGGGARNDGLVKD
LRTIVKELEAVIHDRGEDGHEVLSDLMAALAARQKETTEERLRANEVLTC
TLGAKREMESALSSAYETELRLRFRLEEMTGDVVRLATGRPEIVENLKDK
HEKINFLEDRLGCAEKNLRIAKGQTRK back to topmRNA from alignment at A-nodosum_M_contig102:138457..139930+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig102.24.1 ID=mRNA_A-nodosum_M_contig102.24.1|Name=mRNA_A-nodosum_M_contig102.24.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1474bp|location=Sequence derived from alignment at A-nodosum_M_contig102:138457..139930+ (Ascophyllum nodosum dioecious)
GCTGTTGCTGTTGCTGCAGAGACAGGTACGGTCGCGGTTAAGATCGGCGC
ATCCAACAGTGGCGAAAGAGCTAATGATGTTACTGCCCAGCTGGCAGAAG
CTATCAAGGCGAAGGAGGCTTTGGAGGAAAAGCTTACGGAATTTGCCAAG
TATACGGTGAGTTTGCCTGCCGTCGTGGTGTCTTGCAAGGAGAGCTTCTA
GGTTCCTTCGCCATTATGACTTGGGAGATTATTGCGTTGTTGGATGCTTT
ATGGCCTAGCATCGCTGAGAGAGGGAAGGGAGTATCAGTCGCTCTTCCCC
CTTTGACAACGCTATTAACGGAACATCTCTAGGACGCCGCGAGTTCAGTG
CCTGGAGACCCTACATTATCAAGACTCTATCGATTTCTCCGCTGGTCGAT
AAGCTTTGGTTTTCTCTATTAGTACCGTAGCAGACATGAAAGAGAAAATA
TATTTTATTTTTAGAACGCGCCTGCTCTGATGTTCACATATCCTCTTGCA
GCGCGACGATGAACCGCTCATATACGTGGTATTTACAGCAATAACCTGGC
CTTCCCGGCGCTAATCTTCGAATGATGACATATAAAATACCTTAGATATA
TAACTGTCACCTTGTTGTACATGCGTCGCGACCTCTAGCTCTATGCCCCC
CCCCCGCAAAGGGGCTGCTATTCCTCGTTCTAGCTTGTTAAAAAAGAAAT
GTTCGTGCGAGAGGAGAGATCCAACCTTAAAAATGGAACCCAAACTAACT
CCCATGAAACTGGATTTGGTTTGATTTTTCGATCTCCATGTGTTTCGGTT
ATTTAGGGGAGGGGGGTGTTCCAACCAAAAAGTATTCGTTTCGGGTCCAA
GGCTAACCAATCTTCATAGTTTTAGTCTCGCAGAAACTTCAGCCTACTAA
CGCTTTCCGCACCGTACAACGGGCTTCACGATACCATTGGCAAATTTAGG
GCATGAAGGAGAAGGAGATGATGACGATGAAGGAGCGTATGGCTGCCATG
GAGGAAAGCCTGCGCGTAGCAAAAAACGAGCTCGCCACCATCCGAGCTGC
CCAAGAGGGAGGGGGGGCGAGAAACGACGGTCTGGTCAAGGACCTAAGGA
CCATCGTGAAGGAGCTTGAAGCGGTGATTCACGACCGTGGGGAGGACGGT
CATGAAGTGCTTTCGGATCTAATGGCAGCTTTGGCCGCAAGGCAGAAAGA
GACAACAGAGGAACGTCTAAGGGCCAACGAGGTCCTAACTTGCACGCTTG
GTGCAAAGCGGGAAATGGAAAGCGCCCTCAGCTCGGCCTATGAGACGGAG
CTGAGACTGCGCTTCCGTCTCGAGGAGATGACCGGCGACGTGGTAAGACT
CGCGACGGGAAGGCCAGAAATTGTGGAAAATCTCAAAGATAAACACGAGA
AAATAAATTTCCTCGAGGACCGCCTCGGGTGCGCGGAGAAGAACCTTCGC
ATAGCGAAGGGTCAAACTCGTAAA back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig102:138457..139930+ >mRNA_A-nodosum_M_contig102.24.1 ID=mRNA_A-nodosum_M_contig102.24.1|Name=mRNA_A-nodosum_M_contig102.24.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=681bp|location=Sequence derived from alignment at A-nodosum_M_contig102:138457..139930+ (Ascophyllum nodosum dioecious)
GCTGTTGCTGTTGCTGCAGAGACAGGTACGGTCGCGGTTAAGATCGGCGC
ATCCAACAGTGGCGAAAGAGCTAATGATGTTACTGCCCAGCTGGCAGAAG
CTATCAAGGCGAAGGAGGCTTTGGAGGAAAAGCTTACGGAATTTGCCAAG
TATACGGGCATGAAGGAGAAGGAGATGATGACGATGAAGGAGCGTATGGC
TGCCATGGAGGAAAGCCTGCGCGTAGCAAAAAACGAGCTCGCCACCATCC
GAGCTGCCCAAGAGGGAGGGGGGGCGAGAAACGACGGTCTGGTCAAGGAC
CTAAGGACCATCGTGAAGGAGCTTGAAGCGGTGATTCACGACCGTGGGGA
GGACGGTCATGAAGTGCTTTCGGATCTAATGGCAGCTTTGGCCGCAAGGC
AGAAAGAGACAACAGAGGAACGTCTAAGGGCCAACGAGGTCCTAACTTGC
ACGCTTGGTGCAAAGCGGGAAATGGAAAGCGCCCTCAGCTCGGCCTATGA
GACGGAGCTGAGACTGCGCTTCCGTCTCGAGGAGATGACCGGCGACGTGG
TAAGACTCGCGACGGGAAGGCCAGAAATTGTGGAAAATCTCAAAGATAAA
CACGAGAAAATAAATTTCCTCGAGGACCGCCTCGGGTGCGCGGAGAAGAA
CCTTCGCATAGCGAAGGGTCAAACTCGTAAA back to top
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