Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 0 |
Start | 1 |
Model size | 157 |
Hectar predicted targeting category | no signal peptide or anchor |
Exons | 2 |
Cds size | 141 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1680866379.9511623-UTR-A-nodosum_M_contig102:135941..135956 | 1680866379.9511623-UTR-A-nodosum_M_contig102:135941..135956 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig102 135942..135956 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1680866379.9609995-CDS-A-nodosum_M_contig102:135956..136021 | 1680866379.9609995-CDS-A-nodosum_M_contig102:135956..136021 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig102 135957..136021 + |
1680866379.9707255-CDS-A-nodosum_M_contig102:136292..136368 | 1680866379.9707255-CDS-A-nodosum_M_contig102:136292..136368 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig102 136293..136368 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig102.21.2 >prot_A-nodosum_M_contig102.21.2 ID=prot_A-nodosum_M_contig102.21.2|Name=mRNA_A-nodosum_M_contig102.21.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=47bp
MEMNRLTRDGTAEPVSRDQILRQLRAVILYPITRAKRSSDSIAFSTK back to topmRNA from alignment at A-nodosum_M_contig102:135942..136368+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig102.21.2 ID=mRNA_A-nodosum_M_contig102.21.2|Name=mRNA_A-nodosum_M_contig102.21.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=427bp|location=Sequence derived from alignment at A-nodosum_M_contig102:135942..136368+ (Ascophyllum nodosum dioecious) GATTCAGCCTCGAGTATGGAGATGAACAGGCTGACGCGGGACGGGACGGC
TGAACCCGTCTCGCGAGACCAAATTCTCAGGCACGCACGGGGACAGGGGA
ATATTCATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTAC
TCGGTTGATCCATACTCTGCTATATGTGATGACCATACATACATATGTTA
ATATTAGCTTTTTGAGCGCAATGTCATCATGTAATATCGCAAGGAGACTA
AGTGCGGGCAGTTTCCACAGCCTTTAGCTGCCAGAGGTAAGAACTCTGAC
CGATCTACTGTACTAGCTGACTGACAAATTACGTGTGTGAAAAATCTGCA
GACAACTCCGGGCGGTAATCCTTTACCCGATAACAAGGGCAAAACGTTCT
TCAGATTCGATCGCATTTTCGACGAAG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig102:135942..136368+ >mRNA_A-nodosum_M_contig102.21.2 ID=mRNA_A-nodosum_M_contig102.21.2|Name=mRNA_A-nodosum_M_contig102.21.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=141bp|location=Sequence derived from alignment at A-nodosum_M_contig102:135942..136368+ (Ascophyllum nodosum dioecious) ATGGAGATGAACAGGCTGACGCGGGACGGGACGGCTGAACCCGTCTCGCG AGACCAAATTCTCAGACAACTCCGGGCGGTAATCCTTTACCCGATAACAA GGGCAAAACGTTCTTCAGATTCGATCGCATTTTCGACGAAG back to top
|