Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 271 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 267 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866380.1450655-UTR-A-nodosum_M_contig102:825313..825317 | 1680866380.1450655-UTR-A-nodosum_M_contig102:825313..825317 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig102 825314..825317 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866380.1533806-CDS-A-nodosum_M_contig102:825317..825528 | 1680866380.1533806-CDS-A-nodosum_M_contig102:825317..825528 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig102 825318..825528 + |
| 1680866380.1633985-CDS-A-nodosum_M_contig102:825750..825806 | 1680866380.1633985-CDS-A-nodosum_M_contig102:825750..825806 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig102 825751..825806 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig102.118.1 >prot_A-nodosum_M_contig102.118.1 ID=prot_A-nodosum_M_contig102.118.1|Name=mRNA_A-nodosum_M_contig102.118.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=89bp
MSDSLCQQTETDGTATPARGVVQRSTHPREHTGSRCGEGIACKVLQGMYA
PTCVQLRGRCASGCAARGRQGDTVAGWPSFSGAGVGIA* back to topmRNA from alignment at A-nodosum_M_contig102:825314..825806+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig102.118.1 ID=mRNA_A-nodosum_M_contig102.118.1|Name=mRNA_A-nodosum_M_contig102.118.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=493bp|location=Sequence derived from alignment at A-nodosum_M_contig102:825314..825806+ (Ascophyllum nodosum dioecious)
CTTTATGAGTGACTCTCTGTGTCAGCAGACAGAAACTGATGGAACTGCAA
CTCCTGCTCGAGGCGTTGTTCAACGTTCGACGCACCCGAGAGAGCACACG
GGATCCCGGTGCGGAGAAGGCATCGCTTGCAAAGTTCTGCAAGGGATGTA
CGCACCAACTTGTGTTCAGCTGCGAGGTCGGTGTGCTTCCGGCTGTGCCG
CCAGAGGACGTCAAGGTGAGCCCTCTCACGCCACGCACGTACACCCTATA
TGAAATTTGCACCTGCGCCGTGTACGTGCGCACCTGTGTGGAAGAATCGC
CACACCGGCACTTCCATTTTCACGGCCACCCGCAACACATTTTATAAGCG
CTTGTCACCAAATACACCTTCCAACTTGTAGGTCAGCCCTCCTGCAAGCG
TTTAGTACTGAAATCGCTGCGTCTTTTGTTGCTGCAGGAGACACGGTGGC
TGGATGGCCAAGCTTCTCAGGCGCTGGCGTCGGCATTGCGTGA back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig102:825314..825806+ >mRNA_A-nodosum_M_contig102.118.1 ID=mRNA_A-nodosum_M_contig102.118.1|Name=mRNA_A-nodosum_M_contig102.118.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=267bp|location=Sequence derived from alignment at A-nodosum_M_contig102:825314..825806+ (Ascophyllum nodosum dioecious)
ATGAGTGACTCTCTGTGTCAGCAGACAGAAACTGATGGAACTGCAACTCC
TGCTCGAGGCGTTGTTCAACGTTCGACGCACCCGAGAGAGCACACGGGAT
CCCGGTGCGGAGAAGGCATCGCTTGCAAAGTTCTGCAAGGGATGTACGCA
CCAACTTGTGTTCAGCTGCGAGGTCGGTGTGCTTCCGGCTGTGCCGCCAG
AGGACGTCAAGGAGACACGGTGGCTGGATGGCCAAGCTTCTCAGGCGCTG
GCGTCGGCATTGCGTGA back to top
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