Homology
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match:
A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)
HSP 1 Score: 617 bits (1592), Expect = 9.250e-204
Identity = 306/508 (60.24%), Postives = 393/508 (77.36%), Query Frame = 1
Query: 1222 SVAGVERSVYRKGWEEAMQSEFDGHMKT*NFHMVDRVPNGRKPVSSKWCFDYKTDKEGKITKFKARLLPKGFTQVRDVDYTHSSSPCLSSASIQLVLALANEKELPFRHFDVAQMYIRASLDEEVYMKLPGGCGEQSKMTVKSESAIHGLKQSGCK*GHLCADTLIANESEPCKADPFIFRKIVDGVVVMIIRVYVDDLLIGES*EDYQSLLASLNKKFPTNNLGEYT*YDECGIETNVELGTLKLSQEAYVERLIKRFGV*SIPDIPASPGADLGPKQDGRPGGDWPVREAGGSLMWLSTMTRPDIINAVRGVARYAHEPTERLWQAIMKILSYLDETKRLGITYVRGSGLSLNMYADADYANKDNDRRLVSGIAVTLGGTVVSHASKKQRVVSLSTSEPEYIAAGNGVKEALFVRAVLSFIAPETCGASANVLEDNQRIKALIENPLSSARSKHIDVRFHFIREIFKARKISVEYVASADQHADILTKALRGANFRYHRKHLINLA 2745
+VAGV +SVYR+GWE+AM+ EFDGH+ T F VD P GR+PVSSKW F +KT+K+GKI KFKARL+ +GF+Q+ +VDY HSSSPC SSASI+L+LA+ANEK L H+DV Q + A LDE+V+++LP GCGE+S VK+E AI+GLKQSG + G+ ADTL+ N E CKADP +FRK+ D VV D +L+ S +D + LLASLNK FPT +LGE +D C +E ++E GTL++SQ AY++ ++ RF V S IPASPG D+GPK+D GG+WPVREA GS+MW+ST +RPDI AVR VAR+AH P ER W+AI+KIL+YL ET+ LGITY RGSGL L +Y DA YA+ + DRR VSG+A T+GGTV+SH SK Q +VSLS++E EYIAAG GVKEALFVRAVLSFIAPET G+S VLEDNQ AL++NPLSSARSKHIDVR+HFIR +F++ IS+++V++++QHAD+LTKAL ++ +YHR+ L+N A
Sbjct: 2 TVAGVTKSVYREGWEQAMREEFDGHLGTGTFSFVDGTPEGRRPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAE-DRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMNFA 508
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match:
A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)
HSP 1 Score: 641 bits (1653), Expect = 1.990e-203
Identity = 319/516 (61.82%), Postives = 403/516 (78.10%), Query Frame = 1
Query: 1201 EVESPSHSVAGVERSVYRKGWEEAMQSEFDGHMKT*NFHMVDRVPNGRKPVSSKWCFDYKTDKEGKITKFKARLLPKGFTQVRDVDYTHSSSPCLSSASIQLVLALANEKELPFRHFDVAQMYIRASLDEEVYMKLPGGCGEQSKMTVKSESAIHGLKQSGCK*GHLCADTLIANESEPCKADPFIFRKIVDGVVVMIIRVYVDDLLIGES*EDYQSLLASLNKKFPTNNLGEYT*YDECGIETNVELGTLKLSQEAYVERLIKRFGV*SIPDIPASPGADLGPKQDGRPGGDWPVREAGGSLMWLSTMTRPDIINAVRGVARYAHEPTERLWQAIMKILSYLDETKRLGITYVRGSGLSLNMYADADYANKDNDRRLVSGIAVTLGGTVVSHASKKQRVVSLSTSEPEYIAAGNGVKEALFVRAVLSFIAPETCGASANVLEDNQRIKALIENPLSSARSKHIDVRFHFIREIFKARKISVEYVASADQHADILTKALRGANFRYHRKHLINLAE 2748
+VE+P +VAGV +SVYR+GWE+AM+ EF+GH+ T F VD P GR+PVSSKWCF +KT+KEGKI FKARL+ +GF+Q+ +VDY HSSSPC SSASI+L+LA+ANEK + H+DV Q Y A+LDEEV++KLP GCG++S K+E AI+GLKQSG + G+ ADTL+ N E CKADP +FRK+VD VVVMII +YVDD+L+ S ED + LLASLNKKFPT NLGE +D C IE +VE GTL++SQ AY++ +++RF V S IPA+PGADLGPK++ GG+WPVREA GS+MW+ST +RPD+ AVR VAR+AH P +R W AI KIL YL T+ LGITY RGSGL L +Y DA YA+ + DRR VSG+A T+GGTVVSH SK Q +VSLS++E EYIAAG GVKEALFVRAVLSF+APET G+S VLEDNQ AL++NPLSS R+KHIDVR+HFIR +F++ ISV++V + +QHAD+LTKAL + +YHR+ L+NL E
Sbjct: 732 DVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1246
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match:
A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)
HSP 1 Score: 641 bits (1653), Expect = 1.790e-199
Identity = 319/516 (61.82%), Postives = 403/516 (78.10%), Query Frame = 1
Query: 1201 EVESPSHSVAGVERSVYRKGWEEAMQSEFDGHMKT*NFHMVDRVPNGRKPVSSKWCFDYKTDKEGKITKFKARLLPKGFTQVRDVDYTHSSSPCLSSASIQLVLALANEKELPFRHFDVAQMYIRASLDEEVYMKLPGGCGEQSKMTVKSESAIHGLKQSGCK*GHLCADTLIANESEPCKADPFIFRKIVDGVVVMIIRVYVDDLLIGES*EDYQSLLASLNKKFPTNNLGEYT*YDECGIETNVELGTLKLSQEAYVERLIKRFGV*SIPDIPASPGADLGPKQDGRPGGDWPVREAGGSLMWLSTMTRPDIINAVRGVARYAHEPTERLWQAIMKILSYLDETKRLGITYVRGSGLSLNMYADADYANKDNDRRLVSGIAVTLGGTVVSHASKKQRVVSLSTSEPEYIAAGNGVKEALFVRAVLSFIAPETCGASANVLEDNQRIKALIENPLSSARSKHIDVRFHFIREIFKARKISVEYVASADQHADILTKALRGANFRYHRKHLINLAE 2748
+VE+P +VAGV +SVYR+GWE+AM+ EF+GH+ T F VD P GR+PVSSKWCF +KT+KEGKI FKARL+ +GF+Q+ +VDY HSSSPC SSASI+L+LA+ANEK + H+DV Q Y A+LDEEV++KLP GCG++S K+E AI+GLKQSG + G+ ADTL+ N E CKADP +FRK+VD VVVMII +YVDD+L+ S ED + LLASLNKKFPT NLGE +D C IE +VE GTL++SQ AY++ +++RF V S IPA+PGADLGPK++ GG+WPVREA GS+MW+ST +RPD+ AVR VAR+AH P +R W AI KIL YL T+ LGITY RGSGL L +Y DA YA+ + DRR VSG+A T+GGTVVSH SK Q +VSLS++E EYIAAG GVKEALFVRAVLSF+APET G+S VLEDNQ AL++NPLSS R+KHIDVR+HFIR +F++ ISV++V + +QHAD+LTKAL + +YHR+ L+NL E
Sbjct: 1111 DVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1625
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match:
A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)
HSP 1 Score: 641 bits (1653), Expect = 4.940e-198
Identity = 319/516 (61.82%), Postives = 403/516 (78.10%), Query Frame = 1
Query: 1201 EVESPSHSVAGVERSVYRKGWEEAMQSEFDGHMKT*NFHMVDRVPNGRKPVSSKWCFDYKTDKEGKITKFKARLLPKGFTQVRDVDYTHSSSPCLSSASIQLVLALANEKELPFRHFDVAQMYIRASLDEEVYMKLPGGCGEQSKMTVKSESAIHGLKQSGCK*GHLCADTLIANESEPCKADPFIFRKIVDGVVVMIIRVYVDDLLIGES*EDYQSLLASLNKKFPTNNLGEYT*YDECGIETNVELGTLKLSQEAYVERLIKRFGV*SIPDIPASPGADLGPKQDGRPGGDWPVREAGGSLMWLSTMTRPDIINAVRGVARYAHEPTERLWQAIMKILSYLDETKRLGITYVRGSGLSLNMYADADYANKDNDRRLVSGIAVTLGGTVVSHASKKQRVVSLSTSEPEYIAAGNGVKEALFVRAVLSFIAPETCGASANVLEDNQRIKALIENPLSSARSKHIDVRFHFIREIFKARKISVEYVASADQHADILTKALRGANFRYHRKHLINLAE 2748
+VE+P +VAGV +SVYR+GWE+AM+ EF+GH+ T F VD P GR+PVSSKWCF +KT+KEGKI FKARL+ +GF+Q+ +VDY HSSSPC SSASI+L+LA+ANEK + H+DV Q Y A+LDEEV++KLP GCG++S K+E AI+GLKQSG + G+ ADTL+ N E CKADP +FRK+VD VVVMII +YVDD+L+ S ED + LLASLNKKFPT NLGE +D C IE +VE GTL++SQ AY++ +++RF V S IPA+PGADLGPK++ GG+WPVREA GS+MW+ST +RPD+ AVR VAR+AH P +R W AI KIL YL T+ LGITY RGSGL L +Y DA YA+ + DRR VSG+A T+GGTVVSH SK Q +VSLS++E EYIAAG GVKEALFVRAVLSF+APET G+S VLEDNQ AL++NPLSS R+KHIDVR+HFIR +F++ ISV++V + +QHAD+LTKAL + +YHR+ L+NL E
Sbjct: 1274 DVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1788
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match:
A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)
HSP 1 Score: 626 bits (1614), Expect = 3.270e-193
Identity = 312/499 (62.53%), Postives = 392/499 (78.56%), Query Frame = 1
Query: 1201 EVESPSHSVAGVERSVYRKGWEEAMQSEFDGHMKT*NFHMVDRVPNGRKPVSSKWCFDYKTDKEGKITKFKARLLPKGFTQVRDVDYTHSSSPCLSSASIQLVLALANEKELPFRHFDVAQMYIRASLDEEVYMKLPGGCGEQSKMTVKSESAIHGLKQSGCK*GHLCADTLIANESEPCKADPFIFRKIVDGVVVMIIRVYVDDLLIGES*EDYQSLLASLNKKFPTNNLGEYT*YDECGIETNVELGTLKLSQEAYVERLIKRFGV*SIPDIPASPGADLGPKQDGRPGGDWPVREAGGSLMWLSTMTRPDIINAVRGVARYAHEPTERLWQAIMKILSYLDETKRLGITYVRGSGLSLNMYADADYANKDNDRRLVSGIAVTLGGTVVSHASKKQRVVSLSTSEPEYIAAGNGVKEALFVRAVLSFIAPETCGASANVLEDNQRIKALIENPLSSARSKHIDVRFHFIREIFKARKISVEYVASADQHADILTKAL 2697
+VE+P +VAGV +SVYR+GWE+AM+ EF+GH+ T F VD P GR+PVSSKWCF +KT+KEGKI FKARL+ +GF+Q+ +VDY HSSSPC SSASI+L+LA+ANEK + H+DV Q Y A+LDEEV++KLP GCG++S K+E AI+GLKQSG + G+ ADTL+ N E CKADP +FRK+VD VVVMII +YVDD+L+ S ED + LLASLNKKFPT NLGE +D C IE +VE GTL++SQ AY++ +++RF V S IPA+PGADLGPK++ GG+WPVREA GS+MW+ST +RPD+ AVR VAR+AH P +R W AI KIL YL T+ LGITY RGSGL L +Y DA YA+ + DRR VSG+A T+GGTVVSH SK Q +VSLS++E EYIAAG GVKEALFVRAVLSF+APET G+S VLEDNQ AL++NPLSS R+KHIDVR+HFIR +F++ ISV++V + +QHAD+LTKAL
Sbjct: 1131 DVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1628
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match:
A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)
HSP 1 Score: 593 bits (1529), Expect = 4.810e-191
Identity = 302/499 (60.52%), Postives = 379/499 (75.95%), Query Frame = 1
Query: 1201 EVESPSHSVAGVERSVYRKGWEEAMQSEFDGHMKT*NFHMVDRVPNGRKPVSSKWCFDYKTDKEGKITKFKARLLPKGFTQVRDVDYTHSSSPCLSSASIQLVLALANEKELPFRHFDVAQMYIRASLDEEVYMKLPGGCGEQSKMTVKSESAIHGLKQSGCK*GHLCADTLIANESEPCKADPFIFRKIVDGVVVMIIRVYVDDLLIGES*EDYQSLLASLNKKFPTNNLGEYT*YDECGIETNVELGTLKLSQEAYVERLIKRFGV*SIPDIPASPGADLGPKQDGRPGGDWPVREAGGSLMWLSTMTRPDIINAVRGVARYAHEPTERLWQAIMKILSYLDETKRLGITYVRGSGLSLNMYADADYANKDNDRRLVSGIAVTLGGTVVSHASKKQRVVSLSTS-------EPEYIAAGNGVKEALFVRAVLSFIAPETCGASANVLEDNQRIKALIENPLSSARSKHIDVRFHFIREIFKARKISVEYVASADQHA 2676
+VE+P +VAGV +SVYR+GWE+AM+ EF+GH+ T F VD P GR+PVSSKWCF +KT+KEGKI FKARL+ +GF+Q+ +VDY HSSSPC SSASI+L+LA+ANEK + H+DV Q Y A+LDEEV++KLP GCG++S K+E AI+GLKQSG + G+ ADTL+ N E CKADP +FRK+VD VVVMII +YVDD+L+ S ED + LLASL+KKFPT NL E +D C IE +VE GTL++SQ AY++ ++KRF V S IPASPG DLGPK+D GG+WPVREA GS+MW+ST +RPD+ AVR VAR+AH P +R W AI KIL YL T+ LGITY RGSGL L +Y DA YA+ + DRR VSG+A T+GGTVVSH SK Q +VSLS++ E EY AG VKEALFVRAVLSF+APET G+S VL DNQ AL++NPLSS R+KHIDVRFHFIR +F++ ISV+++ + +QHA
Sbjct: 286 DVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGEWPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTXXXXXXTEAEYFTAGECVKEALFVRAVLSFVAPETSGSSIQVL-DNQGAMALVQNPLSSGRTKHIDVRFHFIRVLFRSGDISVKFIPTTEQHA 782
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match:
A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)
HSP 1 Score: 572 bits (1475), Expect = 2.030e-182
Identity = 298/516 (57.75%), Postives = 382/516 (74.03%), Query Frame = 1
Query: 1201 EVESPSHSVAGVERSVYRKGWEEAMQSEFDGHMKT*NFHMVDRVPNGRKPVSSKWCFDYKTDKEGKITKFKARLLPKGFTQVRDVDYTHSSSPCLSSASIQLVLALANEKELPFRHFDVAQMYIRASLDEEVYMKLPGGCGEQSKMTVKSESAIHGLKQSGCK*GHLCADTLIANESEPCKADPFIFRKIVDGVVVMIIRVYVDDLLIGES*EDYQSLLASLNKKFPTNNLGEYT*YDECGIETNVELGTLKLSQEAYVERLIKRFGV*SIPDIPASPGADLGPKQDGRPGGDWPVREAGGSLMWLSTMTRPDIINAVRGVARYAHEPTERLWQAIMKILSYLDETKRLGITYVRGSGLSLNMYADADYANKDNDRRLVSGIAVTLGGTVVSHASKKQRVVSLSTSEPEYIAAGNGVKEALFVRAVLSFIAPETCGASANVLEDNQRIKALIENPLSSARSKHIDVRFHFIREIFKARKISVEYVASADQHADILTKALRGANFRYHRKHLINLAE 2748
+VESP +VAGV +SVYR+GWE+AM+ EF+GH+ +G + +W KT+KEGKI KAR + +GF+Q+ + SSSPC SSASI+L+LA+ANEK + H+DV Q Y A+LDEEV++KLP GCG++S K+E AI+GLKQSG + G+ ADTL+ N E CKADP +FRK+VD VVVMII +YVDD+L+ S ED + LLASLNKKFPT NLGE +D C IE +V+ GTL++SQ AY++ +++RF V S IPA+PGADLGPK++ GG+WPVREA GS+MW+ST +RPD+ AVR VAR+AH P +R W AI KIL YL T+ LGITY RGSGL L +Y DA YA+ + DRR VS +A T+GGTVVSH SK + +VSLS++E EYIAAG GVKEALFVRAVLSF+APET G+S VLEDNQ AL++NPLSS KHIDVRFHFIR +F++ SV++V + +QHADILT+AL A+ +YHR+ L+NL E
Sbjct: 338 DVESPPMTVAGVNKSVYREGWEQAMREEFEGHLG-----------HGDVFIRRRW----KTNKEGKIDTLKARRVARGFSQITSIISIPSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGEWPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDARYADTE-DRRSVSRLATTVGGTVVSHGSKARSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETRGSSIQVLEDNQGAIALVQNPLSSGGMKHIDVRFHFIRGLFRSGDTSVKFVPTTEQHADILTQALSRASLQYHRRKLMNLPE 837
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match:
A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE)
HSP 1 Score: 565 bits (1455), Expect = 7.070e-177
Identity = 298/541 (55.08%), Postives = 376/541 (69.50%), Query Frame = 1
Query: 1201 EVESPSHSVAGVERSVYRKGWEEAMQSEFDGHMKT*NFHMVDRVPNGRKPVSSKWCFDYKTDKEGKITKFKARLLPKGFTQVRDVDYTHSSSPCLSSASIQLVLALANEKELPFRHFDVAQMYIRASLDEEVYMKLPGGCGEQSKMTVKSESAIHGLKQSGCK*GHLCADTLIANESEPCKADPFIFRKIVDGVVVMIIRVYVDDLLIGES*EDYQSLLASLNKKFPTNNLGEYT*YDECGIETNVELGTLKLSQEAYVERLIKRFGV*SIPDIPASPGADLGPKQDGRPGGDWPVREAGGSLMWLSTMTRPDIINAVRGVARYAHEPTERLWQAIMKILSYLDETKRLGITYVRGSGLSLNMYADADYANKDNDRRLVSGIAVTLGGTVVSHASKKQRVVSLSTSEPEYIAAGNGVKEALFVRAVLSFIAPETCGASANVLEDNQRIKALIENPLSSARSKH-------------------------IDVRFHFIREIFKARKISVEYVASADQHADILTKALRGANFRYHRKHLINLAE 2748
+VE P +VAGV +SVYR+ E+AM+ EF+GH+ T F VD P GR+PVSSKWCF +KT+KEGKI FKARL+ +GF+Q+ +VDY HSSSPC SSASI+L+LA+ANEK + H+DV Q Y A+LDEEV++KLP GCG++S K+E AI+GLKQSG + G+ ADTL+ N E CKADP +FRK+VD VVVMII +YVDD+L+ S ED + LLASLNKKFPT NLGE +D C IE +VE GTL++SQ AY++ + G +WP REA GS++W+ST +RPD+ AVR VAR+AH P +R W AI KIL YL T+ LGITY RGSGL L +Y DA YA+ + DRR V+G+A T+GGTVVSH SK Q +VSLS++E EYIAAG GVKEALFVRAVLSF+APET G+S VLEDNQ AL++NPLSS R+KH IDVRFHFI + ++ ISV++V + +QHAD+LTKAL A+ +YHR L+NL E
Sbjct: 532 DVEPPPMTVAGVAKSVYRERLEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERDVEAGTLRISQTAYIDSM----------------------------GEEWPAREAIGSMVWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTE-DRRSVAGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHRREISFHRRIEFXVFVFDGSRVARNIDVRFHFIGGLIRSGDISVKFVPTTEQHADLLTKALSRASLKYHRHKLMNLPE 1043
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match:
A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)
HSP 1 Score: 567 bits (1462), Expect = 1.230e-175
Identity = 292/514 (56.81%), Postives = 370/514 (71.98%), Query Frame = 1
Query: 1201 EVESPSHSVAGVERSVYRKGWEEAMQSEFDGHMKT*NFHMVDRVPNGRKPVSSKWCFDYKTDKEGKITKFKARLLPKGFTQVRDVDYTHSSSPCLSSASIQLVLALANEKELPFRHFDVAQMYIRASLDEEVYMKLPGGCGEQSKMTVKSESAIHGLKQSGCK*GHLCADTLIANESEPCKADPFIFRKIVDGVVVMIIRVYVDDLLIGES*EDYQSLLASLNKKFPTNNLGEYT*YDECGIETNVELGTLKLSQEAYVERLIKRFGV*SIPDIPASPGADLGPKQDGRPGGDWPVREAGGSLMWLSTMTRPDIINAVRGVARYAHEPTERLWQAIMKILSYLDETKRLGITYVRGSGLSLNMYADADYANKDNDRRLVSGIAVTLGGTVVSHASKKQRVVSLSTSEPEYIAAGNGVKEALFVRAVLSFIAPETCGASANVLEDNQRIKALIENPLSSARSKHIDVRFHFIREIFKARKISVEYVASADQHADILTKALRGANFRYHRKHLINL 2742
+VE+ + V+ S YRK W+EA++ E DGH KT F ++++P GRK VS+KW FDYKTD++G IT FKARL+ +GF+QV DY HSSS C + +SI+L +A A E LP RHFD+ Q Y A + EE+Y+++ G G + +K E A++GLKQSG + G A+ L+ + E C+ADP +FRKIVDG VV II +YVDD++ S E+ + LL SL K P +LGE T YD C IE ++ELGT LSQ+AY+ L+ RFG+ + PA P A+LGPK+D PG D PVR+A G LMW +T TRPDI A+ V R AH PT R W+A+++ILSYL+ T LGITYVRGSGL L +Y DA YA++D RR V+GIAVT+GGTVVSHASK QR+VSLSTSE EYIAAG GVKEALFVRAVLSFIAPET GA VLEDNQ +L++NP SSARSKHIDVRFHFIRE+FK+ +ISVEY+ + +QHAD+LTKAL HR L+N+
Sbjct: 731 DVEALPLTYEDVKWSKYRKQWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1244
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match:
A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)
HSP 1 Score: 569 bits (1466), Expect = 2.320e-171
Identity = 293/514 (57.00%), Postives = 370/514 (71.98%), Query Frame = 1
Query: 1201 EVESPSHSVAGVERSVYRKGWEEAMQSEFDGHMKT*NFHMVDRVPNGRKPVSSKWCFDYKTDKEGKITKFKARLLPKGFTQVRDVDYTHSSSPCLSSASIQLVLALANEKELPFRHFDVAQMYIRASLDEEVYMKLPGGCGEQSKMTVKSESAIHGLKQSGCK*GHLCADTLIANESEPCKADPFIFRKIVDGVVVMIIRVYVDDLLIGES*EDYQSLLASLNKKFPTNNLGEYT*YDECGIETNVELGTLKLSQEAYVERLIKRFGV*SIPDIPASPGADLGPKQDGRPGGDWPVREAGGSLMWLSTMTRPDIINAVRGVARYAHEPTERLWQAIMKILSYLDETKRLGITYVRGSGLSLNMYADADYANKDNDRRLVSGIAVTLGGTVVSHASKKQRVVSLSTSEPEYIAAGNGVKEALFVRAVLSFIAPETCGASANVLEDNQRIKALIENPLSSARSKHIDVRFHFIREIFKARKISVEYVASADQHADILTKALRGANFRYHRKHLINL 2742
+VE+ + V+ S YRK W+EA++ E DGH KT F ++++P GRK VS+KW FDYKTD++G IT FKARL+ +GF+QV DY HSSS C + +SI+L +A A E LP RHFD+ Q Y A + EE+Y+++ G G + +K E A++GLKQSG + G A+ L+ + E C+ADP +FRKIVDG VV II +YVDD++ S E+ + LL SL K P +LGE T YD C IE ++ELGT LSQ+AY+ L+ RFG+ + PA P ADLGPK+D PG D PVR+A G LMW +T TRPDI A+ V R AH PT R W+A+++ILSYL+ T LGITYVRGSGL L +Y DA YA++D RR V+GIAVT+GGTVVSHASK QR+VSLSTSE EYIAAG GVKEALFVRAVLSFIAPET GA VLEDNQ +L++NP SSARSKHIDVRFHFIRE+FK+ +ISVEY+ + +QHAD+LTKAL HR L+N+
Sbjct: 1284 DVEALPLTYEDVKWSKYRKQWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNADLGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1797
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 9.25e-204 / Id = 60.24 Expect = 1.99e-203 / Id = 61.82 Expect = 1.79e-199 / Id = 61.82 Expect = 4.94e-198 / Id = 61.82 Expect = 3.27e-193 / Id = 62.53 Expect = 4.81e-191 / Id = 60.52 Expect = 2.03e-182 / Id = 57.75 Expect = 7.07e-177 / Id = 55.08 Expect = 1.23e-175 / Id = 56.81 Expect = 2.32e-171 / Id = 57.00 Sequence A0A6H5JCG0_9PHAE A0A6H5KSG8_9PHAE A0A6H5JZQ8_9PHAE A0A6H5KF60_9PHAE A0A6H5JN00_9PHAE A0A6H5JC10_9PHAE A0A6H5JQN6_9PHAE A0A6H5JTV6_9PHAE A0A6H5JKS3_9PHAE A0A6H5L175_9PHAE
Pages
back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1019.8.1
>prot_A-nodosum_M_contig1019.8.1 ID=prot_A-nodosum_M_contig1019.8.1|Name=mRNA_A-nodosum_M_contig1019.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=296bp
MWYGSPSLAGEVWPFLKPAIYRVKRKDKSQPKAQDCYYVGPSVNHPRDCM RDLTTHRTILTIRNATWQHVPPAPPAPQQHFPPIAEEGESAAEEGASGEG ASSQRGGRVADLDSESDLYMTGVGPVLPATRKAPAAEAASSAPSRRAEIG SVNDSSSSDSSNSKDDSTSKRGSDSNASHTSNDSSSTSGRVSSGDIPAPT GTEARRLQHFGKPPELQSGRTRSQSRGWTLSESSTDALLAYARTDAKETE VTERVHDLLLEEHLEEERERLDELQDWFERRGLRVKQREEEQSPD* back to top mRNA from alignment at A-nodosum_M_contig1019:247445..251767-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1019.8.1 ID=mRNA_A-nodosum_M_contig1019.8.1|Name=mRNA_A-nodosum_M_contig1019.8.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4323bp|location=Sequence derived from alignment at A-nodosum_M_contig1019:247445..251767- (Ascophyllum nodosum dioecious)CCGCAAACGTGGCATCAAACAGAAAGTTACGCCAGCAGGCAGCCCTAGGT
ACAATGGTGTAGCCGAACGAGCCCTAGCACTGATCAGTGGCACTGCCCTC
GCTGCACGCATCCAAGCTCAAGTATCGTACCCGAGTGCACCGTCCTACCC
GTCATTGTGGGCCGAAGCGGTATCTTGGGCATGCAACGCCCTGAACCGCA
CTGCAACCAAAGCAAACCCAGGGAACAAGTCCCCATACGAG ATGTGGTAC
GGTTCACCTTCCCTTGCCGGGGAAGTATGGCCTTTCCTCAAGCCGGCCAT
CTACAGAGTAAAGAGAAAAGATAAGTCACAGCCGAAAGCACAAGACTGCT
ACTACGTCGGACCCAGCGTTAACCACCCCCGCGACTGCATGCGAGATCTC
ACTACCCACCGCACCATACTGACCATCCGCAATGCTACTTGGCAACACGT
CCCTCCTGCCCCTCCCGCGCCCCAGCAGCACTTTCCTCCCATTGCCGAAG
AAGGGGAGTCTGCAGCGGAGGAGGGCGCGAGCGGGGAGGGCGCGTCAAGT
CAACGCGGAGGGAGGGTGGCAGACTTGGACAGCGAGTCCGACCTCTATAT
GACGGGGGTGGGGCCCGTCCTACCCGCAACACGCAAGGCGCCAGCGGCAG
AAGCGGCATCATCGGCGCCCTCCAGGAGGGCTGAAATCGGCAGTGTCAAC
GACAGCAGCAGCAGTGACAGCAGCAACTCCAAAGATGACAGCACCAGCAA
GAGGGGGAGCGACAGCAACGCTAGCCACACCAGCAATGACAGCAGCAGTA
CAAGCGGCAGAGTCAGCAGCGGGGACATTCCTGCGCCCACAGGGACAGAA
GCGAGGCGCCTGCAGCATTTCGGCAAGCCCCCCGAACTCCAGAGCGGACG
CACAAGGTCCCAATCACGGGGCTGGACTTTGAGTGAGTCTTCTACAGATG
CCCTGCTGGCGTATGCAAGGACCGATGCGAAAGAGACTGAAGTAACAGAA
CGGGTCCATGACTTGCTGCTGGAAGAGCACCTTGAAGAGGAACGCGAGAG
GCTGGACGAGTTGCAGGATTGGTTTGAGAGGCGTGGGCTGCGGGTGAAGC
AGCGCGAGGAGGAGCAGAGCCCGGACTGA CCCCTCGGAATGGTCGCCAAA
CAGCAACCCGAGCTGAGTATTCCGTCGCCCATCGGGAAGAAACCGAATGA
GAAGTAGAATCTCCCTCACATTCTGTCGCAGGAGTAGAACGATCAGTTTA
TCGGAAGGGTTGGGAGGAGGCTATGCAATCAGAGTTTGACGGCCATATGA
AGACATAAAATTTTCACATGGTAGACCGGGTGCCCAACGGTCGGAAACCT
GTAAGCTCAAAATGGTGTTTCGATTACAAGACAGACAAAGAAGGAAAAAT
AACCAAGTTCAAGGCGAGGTTACTTCCAAAGGGGTTCACACAGGTACGCG
ATGTAGACTACACCCACTCATCATCCCCCTGTCTTTCTTCAGCTTCTATC
CAGCTGGTTCTAGCCCTAGCAAACGAGAAAGAACTCCCATTCCGCCACTT
TGACGTAGCCCAGATGTACATTCGTGCATCACTAGACGAGGAGGTGTACA
TGAAACTCCCAGGAGGTTGCGGTGAACAGTCGAAAATGACCGTCAAATCA
GAAAGCGCAATCCATGGCCTGAAGCAGAGTGGGTGCAAGTGAGGTCATTT
GTGTGCAGATACCCTGATAGCGAATGAATCTGAACCGTGTAAAGCTGACC
CATTTATTTTCCGAAAGATCGTTGACGGGGTGGTAGTCATGATCATCCGT
GTCTACGTGGATGATCTGTTGATAGGAGAGTCATAGGAGGACTACCAGTC
GTTGCTGGCATCCCTGAATAAAAAGTTTCCGACGAACAACTTAGGAGAGT
ACACATGATACGATGAATGTGGCATCGAAACAAATGTTGAGCTAGGCACA
TTGAAGTTGTCACAGGAAGCATACGTCGAGAGATTGATAAAACGGTTTGG
TGTATAATCCATCCCCGACATCCCCGCTTCCCCCGGTGCTGATCTAGGAC
CGAAGCAGGACGGTAGGCCGGGAGGGGACTGGCCTGTGAGGGAGGCCGGT
GGAAGCCTGATGTGGCTATCGACCATGACCCGACCGGACATTATTAACGC
CGTGCGAGGCGTAGCGCGTTATGCTCATGAACCAACTGAAAGACTATGGC
AGGCGATAATGAAGATATTGTCGTATCTCGACGAAACGAAACGTCTAGGT
ATTACTTACGTGCGGGGTTCGGGTCTGAGCCTTAATATGTATGCAGATGC
AGACTACGCAAACAAGGATAACGATAGGCGTTTGGTGTCGGGAATAGCCG
TGACTTTAGGAGGCACAGTCGTAAGCCATGCCAGTAAGAAACAGCGTGTA
GTTTCATTATCGACCTCAGAACCAGAGTACATTGCAGCTGGGAACGGTGT
TAAAGAAGCTTTATTTGTGCGTGCTGTTTTGTCTTTCATTGCGCCCGAGA
CGTGTGGGGCAAGTGCAAACGTCCTTGAGGACAATCAGAGGATAAAGGCA
CTGATCGAGAATCCTCTTAGCTCCGCCAGAAGTAAGCATATCGATGTACG
TTTCCACTTTATTCGTGAAATTTTCAAGGCTCGCAAGATTTCTGTAGAGT
ACGTAGCTTCGGCTGACCAGCACGCCGACATACTCACCAAGGCTCTCCGT
GGGGCCAATTTCAGGTACCACCGTAAGCATTTGATTAATCTTGCGGAATG
AGGTACTACAGCTCTGGGTTAGAGAGTTCAAGTAGCAAGTGTACTAGCAC
GTCACCCGAGGCAGGTAGGCCTAGGACTAGCTAGTGACGGGTGTTGTCTC
CGACAATTTCCTATGGACCGCAATGCGATCCTCTGATGGCAAGTAGGCTT
AGGGTGCGTAACCCGCGTGGCTGACATTTGGTTCGTTTTGGTTGATCTCC
TTGCTTTGGGAGCGCGACCGTTGGAATCCTTTGTGATAGCGGCGGTTCTT
TCGTTTTGGACGCTTGGGTTTTTTTGATCGGCGGATCCGGTTTTCCCCGT
GCACCGTTTCTAAATTTCTAGGTACGATCTTGGGGCAGCTATATACCCTA
CTTGATGTTAGTCACTTGCGTGAAGAGTCAGGGAGGGTGTCCGTATAAGT
ACGTAGGGTGCGTTGATCTACCAGCAGTTACGGTTCAACGTTTTTGGACT
AATCATGTAGAGACATGTGTGGGCGTAATTACGCCGAACTCTTGGAGGCA
GATGCTCTGCTCACACTCTCTTTCTCTCTCTCTCTCTCTTTTTGCTCCTT
CTGACGTGTCTTTTGATAAACGTGTTAAATGAGGCTCTACTGTAACACTG
CGCGAGGTAGTGAACCACTCGAAGCTCGAGGCTACAAACACGTACTACCC
GTTAACGGTTTGCCAGCGGCCACCATCACCACCGCAACAGATTCCGCAAT
CACCGTCACCACCATTGTATTTTGCTTCTAAGCTATTGGGGAACGACCGA
GAGGAGCGATAAGGCATTTCATTCGAAGTATCGGCGGGCGAGAAGGAGAC
AGGCAAGGACATGGTGGAGCTCAAACCGGAACGTTTTCTGCTCCAACTAT
CATCATCACCACCACCAGCCGGAGCGGATGTGAAAGCACCCGAACAGAAG
TATCTCTCACGCAGAGAGATGAAGACTACATCATCAGTCGGCGGCTACAT
GCTCCCCGACGCAGAAGGATCGAGACTGGGGAGCACCCCTTTTTTTCAGT
TGGATGTCGGGGGGAGTTCGACATGGCACCACCCCGCCATTCACTAAAAA
CATGCGATGTTGCAAGTGTGCTGGCGACAAAACTAGGTGACCAAGATGAG
CTCTGTACTAATCTGGAGGTACAGCTGAGGTACAGCTACTTGTTCAGGGG
GGTTGCTCACATCACCGCATACTAATCATGGTTGCAGTTTCATGTTCTTC
GGGGGGTGGACTGAGGTATTTGGCAGAGCCGTATTGTTGTCTGTCTGTTT
GTATTGCAAGGGAGATGGAAGCTTATACAACAGAAGAATTTTCTGTGGAC
ACGGCGATGGAGATCAAACGCGAAGTACCAACCCGGTCGATTGAGAACAA
TTTCCGGAGACCAAGCTGATCATAAGCAGCTTCCTGTTCAACCGCCATCA
TTAAGTTCCTAAGCGGACCGATTGGTTACCGTAGTCAGGGACATTTCATT
ATATGCATCGTTTCCGAGGAAAATCCGTCGGCAACCCTGCCAAATTACTA
AGATCTCACACTCGACTCGGAGTACTGACCGAGGACAAAGTGGATCTCAA
CCAGCTTTCTCCCTGAAAATCCG back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1019:247445..251767-
>mRNA_A-nodosum_M_contig1019.8.1 ID=mRNA_A-nodosum_M_contig1019.8.1|Name=mRNA_A-nodosum_M_contig1019.8.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=888bp|location=Sequence derived from alignment at A-nodosum_M_contig1019:247445..251767- (Ascophyllum nodosum dioecious) ATGTGGTACGGTTCACCTTCCCTTGCCGGGGAAGTATGGCCTTTCCTCAA GCCGGCCATCTACAGAGTAAAGAGAAAAGATAAGTCACAGCCGAAAGCAC AAGACTGCTACTACGTCGGACCCAGCGTTAACCACCCCCGCGACTGCATG CGAGATCTCACTACCCACCGCACCATACTGACCATCCGCAATGCTACTTG GCAACACGTCCCTCCTGCCCCTCCCGCGCCCCAGCAGCACTTTCCTCCCA TTGCCGAAGAAGGGGAGTCTGCAGCGGAGGAGGGCGCGAGCGGGGAGGGC GCGTCAAGTCAACGCGGAGGGAGGGTGGCAGACTTGGACAGCGAGTCCGA CCTCTATATGACGGGGGTGGGGCCCGTCCTACCCGCAACACGCAAGGCGC CAGCGGCAGAAGCGGCATCATCGGCGCCCTCCAGGAGGGCTGAAATCGGC AGTGTCAACGACAGCAGCAGCAGTGACAGCAGCAACTCCAAAGATGACAG CACCAGCAAGAGGGGGAGCGACAGCAACGCTAGCCACACCAGCAATGACA GCAGCAGTACAAGCGGCAGAGTCAGCAGCGGGGACATTCCTGCGCCCACA GGGACAGAAGCGAGGCGCCTGCAGCATTTCGGCAAGCCCCCCGAACTCCA GAGCGGACGCACAAGGTCCCAATCACGGGGCTGGACTTTGAGTGAGTCTT CTACAGATGCCCTGCTGGCGTATGCAAGGACCGATGCGAAAGAGACTGAA GTAACAGAACGGGTCCATGACTTGCTGCTGGAAGAGCACCTTGAAGAGGA ACGCGAGAGGCTGGACGAGTTGCAGGATTGGTTTGAGAGGCGTGGGCTGC GGGTGAAGCAGCGCGAGGAGGAGCAGAGCCCGGACTGA back to top