Homology
BLAST of mRNA_A-nodosum_M_contig1018.27.2 vs. uniprot
Match:
A0A6H5JV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV63_9PHAE)
HSP 1 Score: 432 bits (1110), Expect = 2.800e-140
Identity = 239/435 (54.94%), Postives = 299/435 (68.74%), Query Frame = 1
Query: 67 LVASAFSGLAAGVTGVYL--WGDERDRRLLED---------SPEGMEV-EGGELTVGGSPEGYPPVASDFVMPFVRRYGIPDLDQVILPSDEYTSCWDSRTRTPRWVVERINIDTVTGPADRRMSSFRSDPRIYPRFQSNLADFYETGFDRGHMAPAADHKTTQEGLDRTFLLSNMTAQIPGFNRGYWSDFELFIRDLVLPRENRGYSLAPLS-ARPPHLSPPFKDVYVITGPLFLPSKETMPSEDGDD-IDLD---SDDDVIEVPS-SPAPSGPSKWVVKHDIIGGPMKMVAVPTHFFKVIVAEPFPSPEAEASRVPPTTFVAAFAMPNISIPNHTDLRNFLVPLETLESVSGMRFLGEASDSGDLDDDAKAFLDEEAMQERARAGLPPFSEFFGGEAPSTGCRRIESAEHVA--REKRRLFRHLCTATSCVGV 1311
L+ASA SG+AAG TG+YL W ++ ED +P + + + + G +P AS F+MPFV+RYG PDLDQVILPS+EYTSCWDSRTR RWVVERIN++TV+GP DR+ S FR D R+ P F+S+L+DFY +G+DRGH+APA +HKTTQ L +TFLLSNM Q+P FNRGYW DFE F+R LV+P E + A + LSPPFKDVYVITGPLFLPSKET + + +D+D ++ ++VPS SP+ +KWVVKHDI+G PM+MVAVPTHFFK+IVAEP+P P +EA PTTFVAAFAMPN IPN+TDLRNFLVPL L SVSGMRF G +G LD+ AK LD+EA+Q R RAG+P S +G T R+ +H ++ R+FRHLCT TSC G+
Sbjct: 8 LLASAGSGIAAGATGMYLYLWDRGKEGPAQEDVKQDDTLVSTPRSLPLPQPAQENYGTAP------ASAFIMPFVKRYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYGSGYDRGHLAPAGNHKTTQANLTQTFLLSNMAPQMPSFNRGYWGDFEEFVRTLVVPSERSIKAAAAAGFSTSSSLSPPFKDVYVITGPLFLPSKETSSTAGKSNAVDIDQGHAERTAMDVPSQSPSTPAATKWVVKHDILGNPMQMVAVPTHFFKIIVAEPYPPPPSEALVSKPTTFVAAFAMPNADIPNNTDLRNFLVPLGALSSVSGMRFFG----TGLLDETAKLSLDKEAIQVRERAGVPALSGDWGTGIEKTNRRKKGKDDHSLPIADRPRVFRHLCTTTSCRGL 432
BLAST of mRNA_A-nodosum_M_contig1018.27.2 vs. uniprot
Match:
D8LHV3_ECTSI (Endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV3_ECTSI)
HSP 1 Score: 390 bits (1002), Expect = 4.550e-125
Identity = 202/315 (64.13%), Postives = 241/315 (76.51%), Query Frame = 1
Query: 229 ASDFVMPFVRRYGIPDLDQVILPSDEYTSCWDSRTRTPRWVVERINIDTVTGPADRRMSSFRSDPRIYPRFQSNLADFYETGFDRGHMAPAADHKTTQEGLDRTFLLSNMTAQIPGFNRGYWSDFELFIRDLVLPRENRGYSLAPLS-ARPPHLSPPFKDVYVITGPLFLPSKETMP-SEDGDDIDLD---SDDDVIEVPS-SPAPSGPSKWVVKHDIIGGPMKMVAVPTHFFKVIVAEPFPSPEAEASRVPPTTFVAAFAMPNISIPNHTDLRNFLVPLETLESVSGMRFLGEASDSGDLDDDAKAFLDEEAMQ 1155
AS F+MPFV+RYG PDLDQVILPS+EYTSCWDSRTR RWVVERIN++TV+GP DR+ S FR D R+ P F+S+L+DFY +G+DRGH+APA DHKTTQ L +TFLLSNM Q+P FNRGYW DFE F+R LV+P E + A + LSPPFKDVYVITGPLFLPSKET + G+ +D+D ++ ++VPS S +KWVVKHDI+G PM+MVAVPTHFFK+IVAEP+P P +EA PTTFVAAFAMPN IPN+TDLRNFLVPLE L SVSGMRFLG +G LD+ AK LD+EA+Q
Sbjct: 13 ASAFIMPFVKRYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYGSGYDRGHLAPAGDHKTTQANLTQTFLLSNMAPQVPSFNRGYWGDFEEFVRTLVVPSERSIKAAAAAGFSTSSSLSPPFKDVYVITGPLFLPSKETASVAGTGNAVDIDQGQAEGVAVDVPSQSSRTPAATKWVVKHDILGNPMQMVAVPTHFFKIIVAEPYPPPPSEALVSKPTTFVAAFAMPNADIPNNTDLRNFLVPLEALSSVSGMRFLG----TGLLDETAKLSLDKEAIQ 323
BLAST of mRNA_A-nodosum_M_contig1018.27.2 vs. uniprot
Match:
A0A090N2U0_OSTTA (DNA/RNA non-specific endonuclease, active site n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N2U0_OSTTA)
HSP 1 Score: 187 bits (474), Expect = 3.260e-48
Identity = 143/419 (34.13%), Postives = 190/419 (45.35%), Query Frame = 1
Query: 64 RLVASAFSGLAAGVTGVYLWGDERDRRLLEDSPEGMEVEGGELTVGGSPEGYPPVASDFVMPFVRRYGIP-DLDQVILPSDEYTSCWDSRTRTPRWVVERINIDTVTGPADRRMSSFRSDPRIYPRFQSNLADFYETGFDRGHMAPAADHKTTQEGLDRTFLLSNMTAQI-PGFNRGYWSDFELFIRDLVLPRENRGYSLAPLSARPPHLSPPFKDVYVITGPLFLPSKETMPSEDGDDIDLDSDDDVIEVPSSPAPSGPSKWVVKHDIIGGPMKMVAVPTHFFKVIVAEPFPSPEAEASRVPPTTFVAAFAMPNISIPNHTDLRNFLVPLETLESVSGMRFLGEA---SDSGDLDDDAKAFLDEEAMQERARAGLPPFSEFFGG-EAPSTGCRRIESAEHVAREKRRLFRHLCTATSC 1302
RL AS G A G T Y + RR L ++ G + + E V + R+G P D VI Y +D RTR PRWV+E I +TV G R+ S F D + + +S LAD+ +G+DRGH+ AAD K +QE +D TF LSN++ Q+ GFNR YW+ E F+RD K YV TGPLFL S+ SE D D+ ++ + AP P+ W ++H ++G P ++AVPTHFFKV+ E E SRV AAF +PN SIP + LR F+VPL LE VSG+ F D + + FL A Q LP G AP + +K RHLC T+C
Sbjct: 38 RLAASFALGAALGATAAYAYA----RRTLSEA--NRIASGDDASASERAENTETVEHE-----AMRHGWPLDTSSVIHQKSSYVHAFDGRTRNPRWVMEVITRETVGGSGSRKRSDFAEDEAVSWKHRSRLADYRGSGYDRGHLVAAADQKGSQEDMDATFALSNVSPQVGEGFNRDYWAKLEQFVRDEACADGT-------------------KAAYVATGPLFLASR----SESADAESFDASARAVDHANVGAPR-PTVWEMRHPMLGEPPALMAVPTHFFKVVFVE------GEDSRVS----CAAFVLPNSSIPKNVPLRRFVVPLTDLEIVSGLEFFRRGLAGEDRRRYERAEQTFLTTTAKQLPGSGKLPSLPPSKSGVSAPFNPLGDQSELVKESGKKWNDVRHLCDITAC 411
BLAST of mRNA_A-nodosum_M_contig1018.27.2 vs. uniprot
Match:
W7TVJ7_9STRA (Dna rna non-specific nuclease n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVJ7_9STRA)
HSP 1 Score: 183 bits (465), Expect = 3.660e-47
Identity = 122/364 (33.52%), Postives = 181/364 (49.73%), Query Frame = 1
Query: 259 RYGIPDLDQVILPSDEYTSCWDSRTRTPRWVVERINIDTVTGPADRRMSSFRSDPRIYPRFQSNLADFYETGFDRGHMAPAADHKTTQEGLDRTFLLSNMTAQIPG-FNRGYWSDFELFIRDLVLPRENRGYSLAPLSARPPHLSPPFKDVYVITGPLFLPSKETMPSEDGDDIDLDSDDDVIEVPSSPAPSGPSKWVVKHDIIGGPMKMVAVPTHFFKVIVAEPFPSPEAEASRVPPTTFVAAFAMPNISIPNHTDLRNFLVPLETLESVSGMRFLGEASDSGD---LDDDAKAFLDEEAMQERARAGLPPFSEFFGGEAPSTGCRRIESAEHVA------REKRRLF------RHLCTATSC 1302
+ G+P + + + + C+D+RTR PRWV+ERI DT G ADRR+ SF + I P F+S +D+ +G+DRGHMAPAA+++++ + ++ TF L+N++ Q+ G FNR YW+ E F RDL ++ VY+++GPLFLP ++ GD P + P+ +++++ ++++G P +VAVPTHFFK ++AE V VAAF +PN IP L FLVPLE LE +G+RF +A D LD + +E AGL +APST E H + R K L HLC A +C
Sbjct: 55 QVGLPGGETTYMFRENFVVCYDARTRNPRWVMERITRDTCRGEADRRVVSFYEEESIDPSFRSKNSDYLNSGYDRGHMAPAANNRSSVKTMEETFTLANVSPQVGGGFNRDYWARVEKFTRDLTKRCQS---------------------VYLVSGPLFLPRQKQA----GD------------APFTSNPTSKARFIMSYELLGDPPGLVAVPTHFFKCVLAE-----------VEGRYLVAAFVLPNAPIPPEVPLTRFLVPLENLEQAAGVRFFAQALSQEDKERLDGRVQLLRGTLGGEEGGIAGL------LAAQAPSTALVTREGYGHDSGRWGKGRNKGGLRLNLAGPEHLCEALAC 364
BLAST of mRNA_A-nodosum_M_contig1018.27.2 vs. uniprot
Match:
A0A2V0NS84_9CHLO (DNA RNA non-specific endonuclease n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NS84_9CHLO)
HSP 1 Score: 181 bits (460), Expect = 3.550e-46
Identity = 109/291 (37.46%), Postives = 160/291 (54.98%), Query Frame = 1
Query: 214 GYPPVASDFVMPFVRRYGIPDLDQVILPSDEYTSCWDSRTRTPRWVVERINIDTVTGPADRRMSSFRSDPRIYPRFQSNLADFYETGFDRGHMAPAADHKTTQEGLDRTFLLSNMTAQI-PGFNRGYWSDFELFIRDLVLPRENRGYSLAPLSARPPHLSPPFKDVYVITGPLFLPSKETMPSEDGDDIDLDSDDDVIEVPSSPAPSGPSKWVVKHDIIGGPMKMVAVPTHFFKVIVAEPFPSPEAEASRVPPTTFVAAFAMPNISIPNHTDLRNFLVPLETLESVSGMRF 1083
G P D P ++ +G+P +Q+ S + SC+DS TR P+WV+E I+ D++ G R S+F D I RF+S LADF ++G+DRGHMAPAA+HK +Q+ +D TF L+N++ Q+ GFNR YW+ FE F++D+ R + G VYV+TGPL+LP+ P + A +G W +++ +IG P ++VAVPTH+FKV++AE + + T + AF MPN I T L + VPL+ LE V+G RF
Sbjct: 46 GRPVTQKDLEHPALK-FGLPQTEQLRFFSG-FVSCFDSATRNPKWVLEFISKDSLKGEGARDQSTFYEDTSIEERFRSKLADFQDSGYDRGHMAPAANHKGSQKAMDDTFALTNISPQVGAGFNRDYWARFEKFVKDVA--RRSDG-------------------VYVVTGPLYLPT-----------------------PDADAATGRPGWRMQYPMIGKPPQLVAVPTHYFKVVLAE-----NSSGANGGHTAALGAFVMPNAPIDPDTPLSAYAVPLDALECVAGARF 285
BLAST of mRNA_A-nodosum_M_contig1018.27.2 vs. uniprot
Match:
A4RRT2_OSTLU (Endonuclease (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RRT2_OSTLU)
HSP 1 Score: 173 bits (439), Expect = 1.010e-45
Identity = 103/260 (39.62%), Postives = 137/260 (52.69%), Query Frame = 1
Query: 307 YTSCWDSRTRTPRWVVERINIDTVTGPADRRMSSFRSDPRIYPRFQSNLADFYETGFDRGHMAPAADHKTTQEGLDRTFLLSNMTAQI-PGFNRGYWSDFELFIRDLVLPRENRGYSLAPLSARPPHLSPPFKDVYVITGPLFLPSKETMPSEDGDDIDLDSDDDVIEVPSSPAPSGPSKWVVKHDIIGGPMKMVAVPTHFFKVIVAEPFPSPEAEASRVPPTTFVAAFAMPNISIPNHTDLRNFLVPLETLESVSGMRF 1083
Y +D RTR PRWV+E+I DT+ GP R+ S F D + + +S L F +G+DRGH+ AAD K +QE +D TF LSN++ QI PGFNR +W+ FE F+RD + K YV TGPLFLPS+ +E S P P+ +W +++ ++G P M+AVPTHFFKVI+ E T AAF +PN IPN+ LR F+VPL LE VSG+ F
Sbjct: 9 YAHAFDGRTRNPRWVMEKITPDTLAGPGTRKKSDFYEDEEVSWKHRSRLDAFRGSGYDRGHLVAAADQKGSQEEMDATFALSNISPQIGPGFNRDFWAKFEQFVRDAASESSS-------------------KAAYVATGPLFLPSQR------------------VEGGSLPRPT---EWEMRYPMLGEPPAMMAVPTHFFKVILVEGKDD----------TVSCAAFVLPNAPIPNNFPLRRFVVPLTDLEVVSGLEF 218
BLAST of mRNA_A-nodosum_M_contig1018.27.2 vs. uniprot
Match:
A0A835YH22_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YH22_9CHLO)
HSP 1 Score: 180 bits (457), Expect = 1.200e-45
Identity = 107/290 (36.90%), Postives = 155/290 (53.45%), Query Frame = 1
Query: 259 RYGIPDLDQVILPSDEYTSCWDSRTRTPRWVVERINIDTVTGPADRRMSSFRSDPRIYPRFQSNLADFYETGFDRGHMAPAADHKTTQEGLDRTFLLSNMTAQI-PGFNRGYWSDFELFIRDLVLPRENRGYSLAPLSARPPHLSPPFKDVYVITGPLFLPSKETMPSEDGDDIDLDSDDDVIEVPSSPAPSGPSKWVVKHDIIGGPMKMVAVPTHFFKVIVAEPFPSPEAE-----------ASRVP---PTTFVAAFAMPNISIPNHTDLRNFLVPLETLESVSGMRF 1083
++G+P+ D ++ P + Y + +D RTR P+WV+E I + +G A R S F DP + PRF + L+DF +G+DRGHMAPAA+HK +Q+ +D TF L N++ Q GFNR YW+ FE F+++L + G DVYV+TGPL+LP++ T DG S +KW ++HD IG P +VAVPTH+FKV++A+P +P S+ P V AF +PN I L ++VPL LE V+G +F
Sbjct: 45 KHGLPETD-IVRPYEGYVAAYDYRTRNPKWVLEHITPASWSGEASRDRSEFFPDPGVDPRFSAQLSDFRGSGYDRGHMAPAANHKVSQKAMDETFSLVNISPQAGKGFNRDYWARFERFVKELT---DVAG------------------DVYVVTGPLWLPTQTTAVGPDG--------------------SVSTKWTLQHDWIGSPPGLVAVPTHYFKVVLADPRTAPGGREQGXXXXXXHGGSKEPLPRGAVGVGAFVIPNAPIDPRVPLSAYVVPLGDLEQVAGTKF 292
BLAST of mRNA_A-nodosum_M_contig1018.27.2 vs. uniprot
Match:
A0A7S0RJH0_9CHLO (Endonuclease n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RJH0_9CHLO)
HSP 1 Score: 177 bits (450), Expect = 1.720e-45
Identity = 113/298 (37.92%), Postives = 158/298 (53.02%), Query Frame = 1
Query: 193 TVGGSPEGYPPVASDFVMPFVRRYGIPDLDQVILPSDEYTSCWDSRTRTPRWVVERINIDTVTGPADRRMSSFRSDPRIYPRFQSNLADFYETGFDRGHMAPAADHKTTQEGLDRTFLLSNMTAQIP-GFNRGYWSDFELFIRDLVLPRENRGYSLAPLSARPPHLSPPFKDVYVITGPLFLPSKETMPSEDGDDIDLDSDDDVIEVPSSPAPSGPSKWVVKHDIIGGPMKMVAVPTHFFKVIVAEPFPSPEAEASRVPPTTFVAAFAMPNISIPNHTDLRNFLVPLETLESVSGMRF 1083
T G PE +P +YG+P + Q + ++ S +DSRTR P+WV+ER+N DT G +R S F D I R ++ L DF +G+DRGH+APAA+H+ +QE LD TF LSN++ Q+ GFNR YW+ E F+RDL +E DVYV+TGPL+LP++ +E G W + H +IG P MVAVPTHF+KVI+AE + S + + V AF MPN+ I L +++VPLE LE+ +GM+F
Sbjct: 36 TSSGQPEEHP----------AFKYGLP-VGQNLRIYKQFVSSFDSRTRNPQWVLERVNRDTAFGEGNRADSKFIEDNAIPARLRNRLDDFKHSGYDRGHLAPAANHRGSQEALDETFTLSNISPQVGNGFNRAYWARVEKFVRDLT--KE-------------------CSDVYVVTGPLYLPTR----TESG-------------------------WSLVHPMIGKPPSMVAVPTHFYKVILAE-YTSLTGKTQQA-----VGAFVMPNMDIDPQIPLSSWIVPLEDLEAAAGMQF 266
BLAST of mRNA_A-nodosum_M_contig1018.27.2 vs. uniprot
Match:
A0A2K3DGL6_CHLRE (Uncharacterized protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DGL6_CHLRE)
HSP 1 Score: 179 bits (454), Expect = 2.240e-45
Identity = 109/286 (38.11%), Postives = 155/286 (54.20%), Query Frame = 1
Query: 259 RYGIPDLDQVILPSDEYTSCWDSRTRTPRWVVERINIDTVTGPADRRMSSFRSDPRIYPRFQSNLADFYETGFDRGHMAPAADHKTTQEGLDRTFLLSNMTAQI-PGFNRGYWSDFELFIRDLVLPRENRGYSLAPLSARPPHLSPPFKDVYVITGPLFLPSKETMPSEDGDDIDLDSDDDVIEVPSSPAPSGPSKWVVKHDIIGGPMKMVAVPTHFFKVIVAEPFPSPEAEASRVP----------PTTFVAAFAMPNISIPNHTDLRNFLVPLETLESVSGMRF 1083
++G+P+ D +I D Y + +D RTR P+WV E I + +G A+R S F DP + PRF + L+DF +G+DRGHMAPAA+HK +Q+ +D+TF L N++ Q GFNR YW+ FE F+++L + G DVYVITGPL+LP+++ + AP+ SKW + HD IG P +VAVPTH++KV++A+ + A + P T V AF MPN I T L ++VPLE LE V+G F
Sbjct: 47 KHGVPETD-IIRVYDGYVAAYDYRTRNPKWVAEHITPASWSGEANRERSEFFPDPEVDPRFGAKLSDFRGSGYDRGHMAPAANHKDSQKAMDQTFSLVNISPQAGKGFNRDYWARFERFVKELT---DVAG------------------DVYVITGPLWLPTQQQLEGAAAGGX-------XXXXXXXGAPT--SKWTLTHDWIGKPPGLVAVPTHYYKVVLADTRGDNNSAAGKQPLRGNKQPLPRGTVGVGAFVMPNAPIDPRTPLAAYVVPLEDLEQVAGTSF 301
BLAST of mRNA_A-nodosum_M_contig1018.27.2 vs. uniprot
Match:
A0A835Z8T9_9STRA (Endonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8T9_9STRA)
HSP 1 Score: 176 bits (445), Expect = 4.270e-45
Identity = 101/282 (35.82%), Postives = 148/282 (52.48%), Query Frame = 1
Query: 250 FVRRYGIPDLDQVILPSDEYTSCWDSRTRTPRWVVERINIDTVTGPADRRMSSFRSDPRIYPRFQSNLADFYETGFDRGHMAPAADHKTTQEGLDRTFLLSNMTAQIPGFNRGYWSDFELFIRDLVLPRENRGYSLAPLSARPPHLSPPFKDVYVITGPLFLPSKETMPSEDGDDIDLDSDDDVIEVPSSPAPSGPSKWVVKHDIIGGPMKMVAVPTHFFKVIVAEPFPSPEAEASRVPPTTFVAAFAMPNISIPNHTDLRNFLVPLETLESVSGMRFLGEA 1095
+ +G+P +L E+ WDSRTRTPR+VVER++ ++ G A R+ F+ + + PRF++ L DF TG DRGH+A AA+HK Q +D TF++SN+ Q+P FNRGYW E F+R L P F +VYVITGPL+LP+ + + G ++++ +IG P MV VP ++FKV++ +A R VAAF +PN +I T+LR FLVPL LE+ +G++F+ A
Sbjct: 19 YAHTFGLPAAQDPLLSYTEHVVKWDSRTRTPRFVVERVSSTSIAGQAARK-EQFKEETTLEPRFRNRLRDFKGTGLDRGHLAAAANHKDDQGAMDDTFVMSNVAPQLPAFNRGYWQQLERFVRGLA---------------------PQFDNVYVITGPLYLPTAQRSNRDSG------------------------ALLMEYMVIGTPPAMVHVPNYYFKVVIGC-----RKQAGR--DVVAVAAFVLPNQAIEPTTNLRQFLVPLGALEAAAGLKFMPHA 247
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1018.27.2 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.80e-140 / Id = 54.94 Expect = 4.55e-125 / Id = 64.13 Expect = 3.26e-48 / Id = 34.13 Expect = 3.66e-47 / Id = 33.52 Expect = 3.55e-46 / Id = 37.46 Expect = 1.01e-45 / Id = 39.62 Expect = 1.20e-45 / Id = 36.90 Expect = 1.72e-45 / Id = 37.92 Expect = 2.24e-45 / Id = 38.11 Expect = 4.27e-45 / Id = 35.82 Sequence A0A6H5JV63_9PHAE D8LHV3_ECTSI A0A090N2U0_OSTTA W7TVJ7_9STRA A0A2V0NS84_9CHLO A4RRT2_OSTLU A0A835YH22_9CHLO A0A7S0RJH0_9CHLO A0A2K3DGL6_CHLRE A0A835Z8T9_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Seed ortholog 2880.D8LHV3 Preferred name NUC1 PFAMs Endonuclease_NS Model size 2578 Max annot lvl 2759|Eukaryota KEGG ko ko:K01173,ko:K08515 KEGG Pathway ko04130,ko04210,map04130,map04210 Hectar predicted targeting category signal peptide GOs GO:0000014,GO:0000737,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004521,GO:0004527,GO:0004529,GO:0004536,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006139,GO:0006259,GO:0006308,GO:0006309,GO:0006310,GO:0006401,GO:0006725,GO:0006807,GO:0006915,GO:0006921,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009987,GO:0012501,GO:0016020,GO:0016043,GO:0016070,GO:0016787,GO:0016788,GO:0019439,GO:0019866,GO:0022411,GO:0030262,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0034641,GO:0034655,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097194,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901575 Exons 8 Evalue 1.27e-131 EggNOG OGs COG1864@1|root,KOG3721@2759|Eukaryota Description neuron death in response to oxidative stress Cds size 1266 COG category F BRITE ko00000,ko00001,ko03029,ko04131,ko04147
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866378.7625406-UTR-A-nodosum_M_contig1018:187180..187228 1680866378.7625406-UTR-A-nodosum_M_contig1018:187180..187228 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig1018 187181..187228 + 1680866378.8527217-UTR-A-nodosum_M_contig1018:204182..205446 1680866378.8527217-UTR-A-nodosum_M_contig1018:204182..205446 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig1018 204183..205446 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866378.773368-CDS-A-nodosum_M_contig1018:187228..187314 1680866378.773368-CDS-A-nodosum_M_contig1018:187228..187314 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1018 187229..187314 + 1680866378.7876105-CDS-A-nodosum_M_contig1018:187488..187567 1680866378.7876105-CDS-A-nodosum_M_contig1018:187488..187567 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1018 187489..187567 + 1680866378.7980423-CDS-A-nodosum_M_contig1018:188057..188129 1680866378.7980423-CDS-A-nodosum_M_contig1018:188057..188129 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1018 188058..188129 + 1680866378.8085103-CDS-A-nodosum_M_contig1018:201766..201883 1680866378.8085103-CDS-A-nodosum_M_contig1018:201766..201883 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1018 201767..201883 + 1680866378.8173153-CDS-A-nodosum_M_contig1018:202293..202458 1680866378.8173153-CDS-A-nodosum_M_contig1018:202293..202458 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1018 202294..202458 + 1680866378.825902-CDS-A-nodosum_M_contig1018:202862..203061 1680866378.825902-CDS-A-nodosum_M_contig1018:202862..203061 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1018 202863..203061 + 1680866378.8353457-CDS-A-nodosum_M_contig1018:203423..203569 1680866378.8353457-CDS-A-nodosum_M_contig1018:203423..203569 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1018 203424..203569 + 1680866378.8439775-CDS-A-nodosum_M_contig1018:203780..204182 1680866378.8439775-CDS-A-nodosum_M_contig1018:203780..204182 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1018 203781..204182 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1018.27.2
>prot_A-nodosum_M_contig1018.27.2 ID=prot_A-nodosum_M_contig1018.27.2|Name=mRNA_A-nodosum_M_contig1018.27.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=422bp
MSSFTRLVASAFSGLAAGVTGVYLWGDERDRRLLEDSPEGMEVEGGELTV back to top mRNA from alignment at A-nodosum_M_contig1018:187181..205446+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1018.27.2 ID=mRNA_A-nodosum_M_contig1018.27.2|Name=mRNA_A-nodosum_M_contig1018.27.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=18266bp|location=Sequence derived from alignment at A-nodosum_M_contig1018:187181..205446+ (Ascophyllum nodosum dioecious)GGCAGATCAGTACTGCTTTTTATCTTTACAGATTTCCTGGTTCCTGCA AT
GAGTAGCTTCACCAGGCTCGTTGCTTCAGCATTCAGCGGCCTCGCAGCGG
GAGTTACGGGCGTGTACCTGTGGGGCGATGAAAG GTGGGTGTGTCGGTCC
ATCAGCGTAGGAGCTAGCAGGTGGGCAGGGGAAAGTCTAAGGCTCATCTC
CCGGAAATGAGTGTAAGAGGTATCTAGAGGTGAGGGAGATAGAACCGGAG
ACGATTTCTTCATATAAAGTCGCTGCCGATCTTTAACAACCGCGTGGTGG
TTGAGCAGGGATCGGAGGCTGCTGGAGGACTCCCCAGAGGGAATGGAGGT
TGAAGGAGGAGAGCTAACCGTTGGAGGGTCCCCGGAG GTAGGCTGTTCTT
GAGATTGCTCTCCCTCTCGCTCGAATAGTTGCGCGGCGTGATTTTAGCAC
TACTACCCGTGTACGTCTAAATAGCTGTAACTTTTCCTCGTCTCTGTTCT
CGATGTAGTACAGTCACCTGTAGCGGAAACCGCGGAATGTTTACGTACGT
ACGAATTTGCTGCCACCTTGCAGAACAACAAACAAAGAAGTTCGTATGAG
TTCCAATAACATAGCTAGTCCGAATGCGGTACCTGCAGTAACGCGGCCAT
CCTGCTACATGTTCACCATATATTGCGGGGTCTATATTTCAGCGGCGCAC
AACAAACATCGTTCAAGTACGGTTGCACCTCAGATGCAAGGAGTGTAACG
GACGTGTCATCCGTTACACCTACGATGCAACTGTGATATAACTGTTGTGT
GGTACCCCTGTGTGATGCTGTAGCAGCACAATCAAAGCTCCGTACCGCGT
CGGCTCGAACATTTTCGTGTTTCCCAGGGCTATCCTCCGGTGGCGTCTGA
TTTCGTGATGCCTTTCGTCAGGCGCTACGGTATTCCAGATCTCGATCAG G
CAAGGACAAACAGAGAGAAGGAATAGGTACCGGTGTTCGTACTCGCTTTG
GCACATTTTTCTTGAGTAACTTGATGAAGGTTTGAACGCGCCCAGAGTAT
CTTTAAAAAATACATCTCAATAATATTTGACTAGCTCTAGACTATACCTA
CAGCAGCAGCACAGGCAGAAGGTTCAGATGCAATAATGTCGGGGAGAAGT
CCACCGTTTAAAGAAAAATCTGAACGCGTTTAGACCTTCTGAGCATTTAT
TCCCACACAGGGGGAAAAATATCAAAACGCTTAGGTGGGACCATAATAGG
CAGCGAAAACAAAACTTCTTCATGGCATTTAAACGGGTTCCCCGATGGTA
GTGACATTGGGTCAACAGTATAATGTCGGGGAGCAGCCCACCGTTATACT
GTTTTGTACACTTACATAAAACGGCTTACACAAAACATTGTAGTACATGC
CACAACCAAAACAGTCCAAAAACAATGTAGTACGTAATTAGATAGGTTGT
TGTAAATAATTTATCAATGTACTTGCCGGTACTTTCAACATGCCCACTCC
ATACCAATAGTGGGTGCGGGAAAGAGAGGCGCATATTGATTGGTCCATGG
TGACCTGCCAAGGCAGCACTCGTTCGGAACTACCTTGAGGTTTACTGGCC
CTGTGCCTGCGGACTCTCGGCAGTGAACGCCATCGGTACGCATTTGCGTG
ACCCGATAAACTCGGGACTGACCCGATGGCGTATGGCAGTTTATATTGAA
TAATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACCAG
ATTCCGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGGGACGGCTG
AACCCGTCTCGCGAGACCAAATTCTCAGGCACGCACGGGGACAGGGGAAT
ATTCATTTTCCCTGTTGAGCTGACCACGAGCAGGATTGGCAACCTTACCC
GGTTGGTCCATACTCAGCTATATGTGATGACCATACATACATACATACAT
TACAGTACAGTGCAGTACCATAGTAATAATAGTATACGATAATAAGTGTC
ATCCAAATTGAGTTGTAATCCAAGCTTCCCGTGTCTTCTGTTTTTGTGTG
ATATCCCTGCATGGCGACTAATGGATTTGTACAGTATGTATGTATGTATG
TATGGTCATCACATATAACAGAGTATGGATCAACCGGGTAAGGTTGCCAA
TCCTGCTCGTGGTCAGCTGAACAGGGAAAATGAATATTCCCCTGTCCCCG
TGCGTGCCTGAGAATTTGGTCTCGCGAGACGGGTTCAGCCGTCACGTCCC
GCGTCAGCCTGCTTATATCCATACTCAGGCTGAATCTATATACTAGTGGA
TTCCTCCCCGACATTTTACTGTTCACCCAAGCCCCTATTCTTGTATGGTT
CGATGGTACTATTATCGACATTAGTACTATCCTCTTAACTACGTACTACA
GTGTTTATGTTTTGTTATGATTGGTGGCTGTGCATGGTGATTAATATAAG
TGTACAGTTGTTGTTGTTGTTTCTCAAATTCAGCGCATTGGTTGCCAACC
CGAAAAAAACTACTTTACACGGTGGCCAATCCCGCTCGTGGTCTACTGAA
CAGGGAAAAAAATAAAAATAAAAAGTCTGGCAGCGCACCCCCCCCCCCCC
GCGCGCGCTGCTCGTTCGGAGAAAAAATAAAAATAATAAATTTTTTTTTT
AGAAAATCACGCGTCGCATCCACATGTCTAGGCGCTACGCAAGCCGGCGT
TACGCAGGTGGTCTCGGTCCGTCTCGCATCCGTACAAGGATTCCTACGAC
TCGTCAGCTAGGCCAATGGGTGTCGCTTCGCAAAACTCTACGCTTCCGTG
TGCGTAGATATAACGGTGGGTTTCTCCCCGACATTATACTGTTGACCCAA
GGTTACTAAAATTGGGGAACCAGGTTAAATTCCATATAGTGGCTTTGTAT
TTACAGCCTATGTAATAGTATATTATTACTACCATGTTTGATGGTGTACT
ACATTGTCTCTGTTTTGTTTTTACTGTTTTCCTGGTGTCCCTACATGGCG
ATTAATGTAAGTGTACAGTATAACGGTGGGCTTCTCTCCGACATTATACT
GTTGACCCAATGTTATTCCATCGGGGAACCCGTTTAAATGCCACGAAAAG
GTTTTGTATTTACAGCCTTTGATCCCACCTAAACGTTTTGACATTTTTTC
CCCCCTGACTGGGGGATGCTCAGAAGGTCTAGGCGCGTTCTGATTTTTCT
TTAAAATACCGCAATACACTGTGAGATATAGTGTAGTACATAAGAACGTT
ATGATAATATAGGATTGGCAACAATGTTACACTTTTGTTTTACAACACGC
CCATAGGGAATTTACACTATGCTATCTACATGCATTCAGTACGTGTTCAG
TACGTGTTTGTAATACGCTTATATTAATCTCCAGGTAGGTATACCAAACA
AAAAGCAAAAACAAAACAGAAATAATGCAGTACATCATCAAACAGGGTAG
CAAGAATATACTGTTTCATAGACTGCAAAGACAAAACCTCTACATGACAT
TTAAATGGGTTCCCCGATGGTTAGTTGAAAGAAAAACCAGAACGCGCCTA
GACCTTTTTGTTTGAAGAAAAATCTGAACGCATCTAGACCTTCTGAGCAT
CGTTGGTATCATTCTTGCCACTGAAGAAACTACGGCGACACAACAAGTCA
GCCATAGACCTCTCAAATGTCAATCCCGCTCGTGGTCATGAAGAGGTACG
AAGGTCAATGGGTCACATCCTGGTGACAACCCACTACTCAGACCAACAGA
GATCAAAATCGCGACAAAATCCTTGCCAGATCCAACCAACCGAGAACATC
GGAAAGTTATCGGCGTCAAGACGATGTCTTTGGGTACGAACTACAGTTTC
CACTGTCTGGAGTGCTGCCAGGATTTCAGAATATGAAATGCAAGGTACAA
GCTACAGAAAAGACTGTCTGATGTGCTGGCCTCGTTGGTATTATTCTTGT
TCAGGTGAAGAAACTACGGCGGCACAACAAGTCAGCCATAGACCTATCAA
ATGTCAATCCTGCTCGTGGTCATAACGAGGTACGAAGGTCAACAGGTCAA
ATCCTAGTGACAACCCGCTACTCAGACCAAGAGAGATCACAATCGCGACA
AAACCCTTGCCAGATTCAACCAACCAAGAACATCGGAAACTTAGCGGGGT
CAAGACAATGTCTTTGGTTTCTACTGTCTGGAGTGCTGCCAGGATTTCAG
AACATGAAATACAAGCTACAGAGAAGACTGTCTGATGTGCTGCCCATCCA
CCAATCAATTTACGTCATCAAAAGTTGCACAAAAAGTTTTCTAGCTCTCG
GAGGGTTACAAACAAGTTATGCAACACTTTTTACAAGCAATGACACCAAC
CAATGTCAAAACGGTTCGTCAAACCTCCCTACTCCATGTCTAGAGCAACC
TCGATCGGCTCAGATTTTCGTCGCCTACCCACGGCTATTAATAGCGTTCT
CAGCAACAAAGCGAACAAATCACGCTCCATTCAGTTTTGATCAACAAGCC
CAAGTTTCTCGAGGCCACACATTTTACAGAAATAAGGAAAATTGAAAGAC
CGAAGTCCATGGCGGTGGAGGCCTAGAGCTGAAGCCGGCGCGCGAGCCAG
CATCCACCTGTCCAAAGCCCTGTGCATCCCTAAAAAAGCCCCACGAATCT
TGCCCGTCCGCCGCTCCTTGTTGGCCGTCGTAGGAAGAAAACAGACCGTG
GTCAGAGATCAGCTTTTCCCTCAGAAACCTCCCGGTTCGCGCCTTGTATT
TTGGTCTTGCGACGTAGGTGAAGCCGTCCCACCCCGCGTTGCCCCGTCCA
TCTTCCGTTCCCGGAGCGAATCTGGTGCTTACTCGCAGGCTCCTCTCATC
CTTCCCGCTTTCCGCGGCGGTACGTTTTGGTGCCATGATCGTTGGTACGA
ACGGTCTGGCTTGTGGATTCAACTGGCAGTGCACCGCCAACGACATCGTA
TATATATGCCGTTAGCTGGTCACAGAACGCCTGGAGTCCTTACAATCTCC
TAACTTCCGCGATTTGGGTCCACCCCGGCCGGGAGGCAGCCAGGGCAGGA
TTGGGTATGGAAAAAGACAGGTGCACATTAATTGGTCCGCGGTGATACGT
TGGGACGTGAAAAGCAAAATAAAAATGCTGCCGTTGGGAACTAGATTAAT
TCGTTGTACACAAAAGAACGGTCTGGCCCAGAAGGAAGGTGGATTGTGCC
GGTGGACGTCTTGATGTCCAGAATGGATCGGCAGTGAACGCCATCGGTAC
GCAATTGCGCGATCTGACAATAAACTCGGGACTGACCCGATGGCGTATGT
TAGTATAAATAAATGGACGCCACCGCGGAAATCGGGAGGAATCCCGTGAG
CAATGGGCACGATGACGCGAGACGGGACGGCCGAACCTGTCTCGCGAGAC
CAAATTCTCAGACACGAACAGGAACAGGGAAATACATTTTCCCTGTTCAG
CTCACCACGAGCAAGATTGGCAACCTTATCCGGTTGATCCATACTTTTTG
ACGTCAGCTTACGTGATAATTCGAACAATCAATCAATCAACTCTGCTATA
TAAGTGATGATGATACACACGCACTATACTTTCATAAGTACATGAGTCGC
AATTGAAAATATCTGTCGAAGCGGGAAGCTTCCACTTCCCAGGCGCCGCG
AACGCTTGCAGTTATTTCGAAATGTTTCACCTAAATAACAAGAAGCATAT
CATTTCCCCACTTTCTCAATTATGAGGCTATCCATACATGCGACTTTACC
CATCCATGGTGTAATCAATACGTTAGGAAGGGGTGCTTCGAGATTCTCCC
TCTATTAGACCTATAGAAGTAGTTTGTATTTTTTCATAATCGAATCGAGG
ACAATTACTATTTAACACTGTATCTATTTTGTGGATCCGTCCAACAGCAG
CACTTGCGACAAGTATTTCGAAAGTTTGCACGCGCACGATCCCAAAATTT
CCCTTGGAACACAATTCGCCGGTACTTTCAACATGCCCACTTCATACCAA
CAGTGGGTGTGGGAAAGAGAAGCGCGTATTAATTGGTCCATGGTGACCTG
CCAAGGCAGCACCCGTTTGGAACTGTCTTGAGGTTTACTGGCCCTGTGCC
GGCGGACTCTCGACAGTGAACGCCATCGGTACGTAATCGCGTGACCCGAT
AAACTCGGGACTGGCCCGATGACGTATGACGGCTTAAGTAAATAAATAGA
CGCCGCCGCGGAACTCGGGAGGGATCCCTTAAGTAAGCAAGCACCAGATT
CAGCCTGAGTATGTAAATGAGCAGGCTGACGCGGGACGGGACTGCCGAAC
CCATCTCGCGAGACCAAATTCTCAGGCGCGAACGGGGACAGGGGAATATT
AATGTTCCCTGTTGAGCTGCCCACGAGCAGGATTGGCAACCTTACCCGGT
TGATCCATAATCTTGCGTTATGTGATGACCATACATACATACAACGTACA
TACATGCAGTAGTAGTAGATATTCGTGCTGCTGAAATATAGCTATTTATT
GCAGTATCCTCGAGTTGAAGTGGAGCTCTCTGTTCACGGTTCGAGTAGTT
TTTTTGTCGGAAATACTTTTAATCTGCGTAGCTACGGGTACACATCAGTT
TGTTTTTCTTTTCTGTAAAGAAGATTGTGATGCAATAGCTCCAGCTCTAT
AATCTGTAGGACCTGTATCATACCTGGTACCTGGTAGCATTTAAAGACCG
TAGCTTCTTCCTGTACTGCTTTTCAATACTTTAGCAGAATAGCAGTACCA
AATCTCCCACCACGGAAAAACAAAAATGCGAACAGTATCCAGAGCAACTT
ATTCGTGAAGATCTACTGTAAGTACCAGGTACTCCGGAGTATATTGTTTC
TACTACTGTAAAGTGTAATATTATTAGTCTATATGGTCCTGGGTGTGGAG
AATTTGACGCGGGACGGGACGGCCGAACCGGTCTCGCGAGACCAAATTCT
CAGGCGCGAATGGGGACAGCGAAATATTATTTTTCCTGCTGTTCAGCTGG
CCCCAAGCAGGATTGGCAGTTGATGCCCAATCTGCTCAATGTATAACCAA
TACATATATTACAGTGTAACACCAATCTGGGGAGGACAGAAGCCAACTAG
AGCCTAGAGAAGTAGCTCTATATCCCGTGCGGAGCTGTTTATGAAAAAAT
ATCACTGCATCCAAATTTTCCGACATCGACCGAACATTTTGATCAAATTC
GCCTGCGGATCATCTCCCCTTGCCATGTACCTGTACTACTACTGTAGGAA
GGAACGCTTAAATGCGTTCTGATTTTTCCTATAAAAAAACTATACTTAAT
TGTTAAAAAAAAATCTGAACGCATCTAGAACTTCTGAACATCCCCCAGTC
AGGGGGAATTGTTGTCTTGTGTACTTTCTTTTAAACCATCCGAACATCTT
TTtcgcaaactaaACTTTCTTTATAACCATCCGAACATCTGTTATTTTGT
GTGTGTGTGTGTGTTTTCTTCCCATTCATTCTGGACTTCTTCAATGGACG
TACCAGCCGGGGTCACACAGGAAGAAGGTAACACAGGATTTTCCATCCAC
CTTCTTTCTGCGGTGCTTGCCTTAATTTTTCTCGCGAGAAGGATTCAGCC
GTTCCTTTCCCTCGTCGACCGTGATGTCGAATTTTGTGTACTAACGATTT
AATCGTTCTCCACCCGTTGGGCATTTTTATTTTTAGTTTTTAGTTTTTTC
CGTGAGAAAAATCCCGTTTGCCGGGATCGAACTCACGCCCAACGTGTCAG
AGGTTACATGGTACCTCTGAGCTACCGGGGCGACCGGCTATTTTGTGCAA
AAATGATATTGTCTCTTACTACACTATATATTGTAGCAGTAATAGTAATT
AGAGATATAAAAAGGGACAGGGCACAAATCAGCAAATGAAATAACTGCCT
GAACGCGAGCTCTACATGAAAGACTCACAAGGTCTTCTAGATGCGTCAAA
TTTTTATTTAAAAACGGCCTTACGTCGCCTGGAAGGGTCTAAGCCTAGAA
TTGGTTTACCGTTCCGACCAACAGCGAAATGCCTTTTATTTCTGCCTGTA
CAGCAAGTTGAACGAAAGTAACAATCTTTTGCCAGTGGCCCGAAGATCGC
ATCTAATCTATCTATCTAATCTATCTATCTAATCTATCTATCTATCTGCG
ACACGGACACAGCAGTCCGCTTTGAAGGCCGAACTTGAGGGCCGAACGCC
ACGGAAACGCAATTACAATCATTTAATGGTTGGTCTTGTGGTGGAATCGT
AAAGAGGAAACTTTTCTACCAGTACGCGGGACGGGATGGCCGGGTCTGTC
TCGCGAGACCAAATTCTCGGGCACGAACGCGGACAGGAGAACTAGTTTTC
CCTGTGCGGCTGGCATGACCATCAACATGACCATCAATCAACATGACCAT
GACCTTAGACCCAATTGGCACCCATCCATCTTAGACCCAATGTAACAAAT
TGAGCTGTATCCTAGCTTATCGTGCCTTTTGTAAGCGTTTTGGTGTCCCT
GCATGGTTATTAATTCGATAGTAATGCCATTAAGAGGTTATATTTTCAGT
CTATGAAACAACAATTTTATACACGTCGTAGAATCTCCCTGTGGACTGGT
TGTAAAATGTAAATGTATTTCTCTTCACCAATTACAATATTGTAACATTA
TTTGTTTTCTGATAGACTGTGTGTGTGTTTTCTTCCCATCCATTCTGGAC
ATCAAGTTCGTTGGACGTACCAGCCGGGGTCACACAGGAGGAAGGTCACA
CAGGATTTTTAATCCACCTTCCTTCTGCGGTGCGTGCCTTGATTTTTGTC
GCGAGAAGGATTCAGCCATTCCTTTCCCTCGTCGACCGTGAAGTCGAATT
TTGTGTACTAACGAATTAATCGTTCTCCACCCGTTGGGCATTTTTATTTT
GGTTTTTTAGTTTTTAGTGAGAAAAATCCCGTTTGCCGGGATCGAACTCA
CGTCCCAACGTGTCAGAAGGTTACGAGGTGCCTACTGAGCTACCGGGGTC
GACCGGCGCCTTGACTATAAGCCTTTATTGTATAAGGAGGGTCGATGCAC
TATTATTACTGATAATTATAAACAACCTAATTTATTATGTACTCAAAATG
TTTTTGTTTTGTTTTTGTCTGGTGTCCCTGTATGGCGATTAATGTAAGTG
TACAGCATAACGGTGGGTTTCTCCCCGATATTATACTGTTGACCCAATGT
TACTATCATAGGGGAACCCGTTTAAGTGCCATGAAGAGGTTTTGTATTTG
CAGTCTATGATCCCACCTAAACGTTTTGACATTTTCCCCCCTGACTGGGG
GATGCTCAGAAGGTCTATAGATGCGTTCAGATTTTTCTTTAAAAACTAGG
ATTAGCAACCATATCCGGTCGATGCCCAGTCAGTAGTCTTGCCGGTTCTA
AAAACCGATACCGATTTTATGCCTTTGATTTTGTCCTTGCAGCCTTTTAA
GTTCCCACCTACTAAACGTTTTGACATTTTTTCCCCTGACTATCTGGGTG
GTGGTTTAGATACGTACAGATTTTTCTCTGAAAAAATTTCTGTCCTTTTG
AGTGTCTTACCTGTACTATTAATACCTATTATTTGTAAAACTATTATGAT
ACGGGTCGTTTCAACCACTTTGTATTGTTTAGGGTGGCGGAGTATTTGAC
AATTGTCAAGAGGTGCAGCTGTAAACGCGCCATCGAGAGGCTGTGTCTGA
AATCGACGTGACTTCACAAGGTGTTGCGTCATCAACAGCACCTTTTAAAA
AAAAAAGAAAAATCTGAACGCTGAGCATCCCACACAGGGGGAAAATTATC
AAAACGCCGAGGTGGGGATCATAGGCTGCGAAGACAAATATTTTTCTTTA
AAAAACATCTTCATGGCATTTAAACGGGTTCCCCGATGGTAGTAACATTG
GGTCAACAGTATAATGTCGGGGAGAAGCCCATCGTTATACTGTACACTTA
CATCAATCGCCATGCAGGGACACCTAACAAAAATATTGTAGTACCACAAC
CAAAACCAACCAGAAACAATGTAGTACATAATTAGGTAGGATGATAAATA
GTAATAATTTGCGATAATAGTGCCATCGCACCATACAGCAATACAACGAA
CTTGATGTCCAGAATGAATGGGAAGAAAACACACACACGCATCATACAGC
AATAGGGGCTACTATTAATAGTCTAGAACACAAGGAACGTTATGATATCA
TCGCTGATGAGGAGTAGCACATTTTGGTTAAGGTATAGGACACCTGGTGG
CAGTGGTAAATACATATTATAGGGTTTGAGTTAAGGATTGGAACATGTAG
TATTTTAGAAAAAATTAACAACGCATCTAAACCTCTATAAACCCTCTGAG
CATTCACCCAATCAGGGGGATGCTTTGTCAAAACGTTGAGGTGGGAACAT
AGACTGTAAAGAAAGAATCACTTCATGGCATTTAAAAGGGTACCCCGATG
GTAGTAACATTGGGTCAACAGTATAATATTGGGGAGAAACTCACCGTCAT
ACTGTACACTTACAAGCATATAATCGCCATGGAGGTACAAATAAATGGAT
GCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACCAGATTCAGCT
TGCGTGTGGAGATGCGCAGGCTGACGCGGGACGGGACTGCCGAAAGCGTC
TTGCGAGACCAAATTCTCAGGCGCGAACGGGAGCAGAGAAATATTCATTT
TCCCTGTTCAGCTGACCACGACCAGGATTGGCAACCTTACCCGGTTGATC
CTTACCCTTGCTCTATGTGATGACCATACATATGTACCCCAGCAGAGGCA
AAAGTCAACGCTGAACAAAAAGTAAAACTCAATCATGTAATGTTTTATTT
TGTATCGGGTTCAGGCATTGGTGAATCGAGGTCGATGTAGGATGTGCTAC
ATGTAATAAAAGTCACATAGGGTCAATACTACTAATAATATATCGGGGAG
AGAGTGTCAACACGTCAAGAAGGTGGACACATAGTCTGTAAAGAGAACAG
GTCTTCATGAGATTCATTTGAGTTCCTTCCCCAATGGTATAATATCGGGG
AGAAACCCATCGTTACACTGTACACTCACGTATACGCCATGCAAGTACGC
CAAACCAAAGGCAAAAGATAGTTCACGCTGAATCGAAATACAGCTCAGTT
ATGTTTGCAAGGACAAGAACTGTTCATGGCATATAATCAGGTTCTCCGAT
GGTAGTAGCATAGGTTCAGCAGGATCTTGTTCGCGGGATTTGCGGCGCGC
GTGGAGGGCACGAGACTGCCGAAGTGCGTCATGTTCGGAGAAACGGCGGG
GGGGCGCGGACTGCGTGGGGGGGCAGGAAAAAGAGCGGATGGGGTGTCTA
ATGGACGACCTCTGAGCTTTCGGTATCAACGCCGACCAGTGGACGACTGC
AGATCAGGACGAGGAGGAATGGCGCAAGACAGCGGAACAAGGGGCGGAAC
GTTTCGTGGGGAAATCGATCTCTGCAGAGAAAGCCAGGGCTGGACTACGG
CATGCAGTAGTATGCCCTGCCCGAACGTGACGGGAAGGACCAAGGAGACG
ATAGCCCAAAGTAAGCGTGTTCGGGCTGGTTCGCTCGCCACAATTGATTA
GCTTCAAGTGGCGCAAACTTGTATCCTTCGTGTGTTTTTGTCTTTCATTT
ACAGATGTTTACAGATGTTTACAGATGCCATTTTGCCTTTCTCTGGTCTC
TTTGTTTTGTTTCGTTTTCGTTTTTTTTGCTTTCATGGCATCCGCGGCCC
CTCGTTCAATCGTTCAATCGTTCAATCGTTCTGAATCCAACCCGGCAGAC
ACACGCACAGTTAGGTAGCAACGGTCTTTGTGTGTTTTTTTCCTTCTTTT
TTTTTCTTTTTTTTCTTTGGAGATTTCGCTTTTTCCGAGTACAATGTACC
ATATTGCCGTTTCCTTTTTGTGTAGAGAGAACGTTGCACGTTTTACATCC
ACACAATTAGATACAGTAACAACGATTTTTTTGTTTGTTTTTTCGTTGGA
GATGTCGCTTTTTCCGAGTACTATGTACCATCGGCGTTTCCTTTTTTGTC
TATGGAGAGTACGTTGCACGTTTTACTTCCGTAGGGTATTCTACCTTGCG
ACGACGGAATTCAATCAATAAATCAATAAAAAATGTATGCAAATGACAAA
AAGTCTTCATGGGATTTAATTGGCTTCTCCAAAGGCATAATATCGGGGAC
AAACCTACCGTTATACTGTACACTTACATAAATGCCATGCAAGTACACGC
TGAACGAAAAAACAACTCAGTTATGTTTAAATAAAAATCTGAAAATATCT
ACTGTAGACCTTCTGAGCATCCCTCAGTCAGGGGTAAAAAATTGATCATA
GGCTGCAAAGACAAAACCTCTTCATGGCATTTAATCGGGTTCCCCGATGG
TAGTAACATTGGGTCAACAGTAGTATAATGTCGGGGAGAAATCCACTGTT
AAAATGTACACTTACATTAATCGCCCTGCAGGGACACCAAACAAATGATC
CCACCTAAACGTTTTGACATTTTTCCCCCTGCCTGGGGGATGCTCAAGAG
GTCTAGAAGCGTTCAGATTTTTCTTTAAAAACAAAGACAAAATATATGAT
GAGCTTGGACTACACAGCTCAATTTTTTACATTGGATCTAGGATCGGATG
GGTGTTGCTGAAGGAAATCTACAAGGCATGGGTGTCGAAATGATAAAGTA
ATGGAAAATTGTCCAATAACTATTCCCACGGTACATAACTTACAAGTAGT
AATTATGGTGTAGAAAGTAAGGAAACTTGTATTATAAGGTTATCGAAGAG
TGCTTCAACAAATCTATATTAGAGGGTTTTTACCGTGTAATCTATTCCGT
CCATGTTTGTTTGTATTTCACACTATATTAGTCTATATTATATTGCAATT
GTGACAACAGGAGGAGTAGAAGATACTACTAGGACGGCTAGCGGTAGTGG
TATATATATACAGGGTTTTTGGGGTTAGTTAAGAATTAGAACAAGAGGAA
CAGAGAGGATCACCAACGTAGATGTCTTCATAATCCAGAAGTACGAGACA
CCGGTATTCACAGGTCTGTCCCTCGACAGGGGTAGTACTTGTCCTTGCCA
CGTCTTGAATCTTGGGGGCGGCCGATTCAGTTATGTCATATCGGGTTTGC
TATCGGGTTCAAGTCTTGGTGAATCGGAGTCGATCGTAGGTCGTAGTCAC
ATGGGTTCAATGCCGTAACATCGGGGAGAGTCCATCTCCCTTACGAACTT
GCTCTTTTATCACCATGTGAGGACACAAAACCAGGTAAAATTATGTTTTT
TATTACTGTTCTACTGTATAAAGGAGGGGGGGGTTAGAATGTAAATACAG
TATTAATAATAATTTAAAGAAAAATCTGAACACGTCTAAACCTTCTGAGC
ATATTTGGTGAAGCAATAGATGGTTGTTTGAGTAATGAAATGACCTTGTA
CCTATATTATTAGTATAATTTTGTTCTATCTACCTACCTACTTGATACGG
GGCCAGGCAACCTTAGGATAGAGGTAAACACGTATGTTTTGAACACAAGG
TACATGCAGCCGGGGACTAATTTAATACAGAGACTAATAATATTAATAAT
TTAATAAGAGACGTTACATATATCAAATCAACAGTATAGTACAGTACAGT
ACAGTACGGTACTAGTACTATAATAGTACAGTATAGCACTCCTATTACTA
ATAATAGTAGAGGCGTTCTCAAACGGTCTTCTATTTTACTTTTTGCGTTG
GTATGTACCAGGTAGGTGATTGCATTAGACTACAAGTTAAAAACAAACAA
ACATGAGCGCATCTAAACTAAAACATGTAAACGTTGTATCAATATCAATA
TAATAATCAATATAATAATCAATATACAGTAATAATCAATATCATAGAGC
CTCCACCCAGAAAAAACAAGTCTTTGTTGAGTTGGGATCGGTCGCGTGGG
CGAGTGGGTCCACAATTTTGCTTCCGAGGAGTGGTGCGTACCGTGAAGTT
GGATAGATGGCGACGAGCTACTGCCGTCGTCCGAGGCATCGACGTTGCGG
GGCGTTCACGCCGAGAAGCGTACTGTAGTCCCGATTGACTTCGGAGAGGC
GTGGTCCGAACGCCTTCGGTGGAGTCCATGGGCTGCATTTCATGCCTCAC
AATCTGTCTTGTACGGTTACCCACACGGCCAATCGACGAATAGTTTCATT
GTTTTCGCTGTCGTGGTTGTCCTTCATTCTCGTCGAAGGCGTCGAAGGCG
TCGAAGGCGCCGATTGGGTTGGTCCCCCATTCCGCATCGCGGTTCGCTCA
TCAGAGAAACATGATTGAAAAAGAAGAAGAAAAGTCGAGAGAATAAATGA
TAAATATGAAAATGCTACAGTTTGTGGTGGATATATATATCTCACGGATT
GAAACCGTCTTCCGCCGGGAACTTCTCTACACCGCCCACCCACCTCGGGA
ATGTATGTAACTTTGTGCTTTATACTCTATGAACAGTGTTGGTATTTTCT
TGTGCTGCGTTTTTGCCTTCTAGAGTGAAATAAGTAGTCTTATCTTGGAC
TGAAAGCGCCCTCTTTGCACCCTGCCTCGCCTCCAGGTTATCCTACCGTC
AGACGAGTACACGTCATGCTGGGATTCCCGAACGAGGACTCCTCGCTGGG
TGGTGGAGCGCATCAACATCGACACTGTTACGGGCCCAGCTGACCGCAGG
ATG GCAAGTTGGCGGCAGCCCCAGTAGCGCCCTTTGGGCATGGGTGGTAG
GTACTGTAGCAGGTGGTGGTTAGCTCCATTATTCCTCGGAGCGATCGACC
GCGATGGCTGGCCAAGGGTCCAAGGGTCAAGGGTAGGTAACCCTCTCCCC
GTCGAAAGCAGCGTTCCACGATGGTGAATGATCTGATACTGCCACTCTCG
TGCTTCGCTGTTTGTGTGTCCGTATCCGAGAAAATCCGGGCGATTCTTGT
TCCAAGCCACGGGGCTCAAACTAACGTGGAGCATTGTGGACGAACGAACC
GCGCGCCCGAACCCTCTTGGCGACAAAAGCCATGACACGCCCAACCGCCA
CGTCGCCGTCGTCATCGCCTCGGTGCCGTTGCACCGCTTCTCAAATCACC
AATCGCTCTGCAGTCTTCCTTTCGCTCGGATCCGCGAATCTACCCGCGCT
TTCAAAGTAACCTGGCTGACTTCTACGAGACCGGGTTCGATCGAGGGCAT
ATGGCCCCAGCTGCCGACCACAAGACCACTCAGGAAGGCCTGGACAGGAC
CTTTCTCCTCTCCAACATGACGGCACAG GTTATTCCGTTACGTCTGTCGC
TTGTATGTCTGGGCTGCCCAGTCACCTTTTTTTTATCTTTCGGTATTGGG
TTGCTTCGACCTTCGTGCCCGAATAGTACAGATACCTGCGCACATATTTG
TCAGGGGTTCGTTGATGGGGCATGACCGTATCGTAAGCAACGTCGCGGCC
GAAATGTGTTTAAGATGTTACCCCAACAGCTTGGGTGTGCGTAGAGGGTG
TGTGGGGAGACAGGAACGAGGAGGGGTGGGGAGGGATCGAGCCGCTTCAC
GCATCGTGCAAACTCGTATTATGGAGTCCACCGTCAAAGCAGAGACGGGG
TGAGATCCTCTTCCTTTATAACCAGGAATAAGCTCTAGCGGGGGATGTCT
TGCGATTTGCCTCATTCCGTCGCCGGGAGCAGATACCGGGCTTCAACCGC
GGCTACTGGTCAGATTTTGAGCTGTTCATCCGGGACTTGGTGTTGCCCAG
GGAGAACAGGGGCTACAGCCTGGCGCCATTGTCGGCGCGACCGCCGCATC
TCTCGCCGCCTTTCAAGGATGTTTACGTCATTACAGGCCCACTTTTCCTT
CCTTCCAAGGAGACCATGCCGTCGGAAGACG GTAAGAGGGCGCGGTGCTC
CCGTGTTGTGCTAAACGTGAAGGGCTTCAGGCGCTTAGGAGTTTCTTGCT
CGCGAAAGGATTTGTACATGGTTGTTTTGTGGATGGGTGGCAGGGACGGA
ATGTATGCGATCCCCGGCGACGAGACGTGTTCCATCCAACCACTCGCTCC
CCTCCTGCGTTTTCCCGCCACCCTGCCGTGTTTACCCGCGTCGGGGTTTT
CGCGTTATGCATCGTAAGCCAGAGGCCCTCTTGTGACACTTCGCCATGCG
TGTGAAAGGCGTCGCCCCCTCATTATTCGAAGCCGATTGGCACGCCTTTT
CTGCAAGCACGCTGACATCGCTACCCCACTTGCCCTTTTACAGGCGACGA
TATCGACCTCGATTCTGACGACGACGTCATCGAGGTGCCATCGTCCCCGG
CCCCCTCTGGTCCATCGAAATGGGTTGTCAAGCACGACATTATCGGCGGT
CCTATGAAGATGGTTGCCGTGCCAACGCATTTCTTCAAG GCGAGCCGTCC
GAACAGCGATGTGCCGATGAGCGTTCGATACCGTCGATTTTGTTTGGGAA
AATCGGAATCTTGCGTTTCCTTGGTTGACGTCGAGCTGCTCTACTCGTAT
TATTATTTAGTTGGTACCTTACCGTGCCCTTGTTAATACTCAGACCTGTG
CCATCCATCGCCCTCCCCCCCTCCCCCTCCCCCCCCCAACGCCTTCGCAG
GTGATCGTGGCGGAGCCCTTCCCTTCCCCTGAAGCAGAGGCCTCCCGCGT
GCCGCCGACAACATTCGTGGCCGCGTTTGCGATGCCCAACATCTCCATTC
CAAACCACACGGACCTCCGCAACTTCTTGGTACCCCTCGAGACTCTCGAG
AGCGTGTCGGGGATGAGATTCTTAGGCGAGGCTTCCGACTCTGGCGATCT
CGACGACGACGCCAAAGCCTTTTTGGATGAGGAGGCCATGCAGGAGCGCG
CCAGGGCTGGCCTCCCCCCGTTCTCCGAGTTCTTCGGGGGGGAAGCGCCC
AGCACCGGGTGCCGACGGATAGAGAGCGCGGAGCATGTGGCGAGAGAAAA
GCGGAGGCTGTTTCGACACCTGTGTACGGCAACATCGTGTGTTGGCGTCT
GA TTGGGAGATTCCCGCGCTGGTTGGCGTGGTTCCTTGGTATCGTGGCAA
ATGCTTCCGCTGTGATTGGTCGTGACGATGGCTTCGGTGACGGCGGTCTC
GTGGAGGGGCGGTGATTCGATGGGGTGACGGGTTGGGATTCGTCGACTTG
GTTTGTTTTTTGGGGGGCGAAATCCCCCATCGTGCTGAGGTGGTCTTTTT
CAATGGTAGGGGTTCGATAAAAAAATGATATTTTTTTCGCTCAGGGTGAT
GGCTTCCTTGTCACACTCACACTAGTACCCACAGTGGTCTTTAGATAGTT
GGAAGGATTTTCCTTCAAAGCGGTCGATTTTCTCTTGTCTTGCGACGCTT
TCAGTACCGCCTACTTCTCGATGTTGTCGTTCCCTGTACAAGTACTGTAA
GAGTAGCTCGCTGACGACTTGGGCGGAGCTCCACGATTGAAGCTTCCCGA
AATCTAATATTCGTTGAAACTCGAAATGCCCCTCTTCCTGCGTCTGGGCT
TAGGCTATGCCTCTTTCGAGTTTGGTCCATTTGTGTTGTGTTCGTAGTTG
CACTGCTTGGTGAAACAAATCCTGTTCGTATCTACGGTATGTATCTAGTA
TGCTGTATGAGTAAGTAGAAAAAATGGTCTGGTCGGCGCCGTACGGGTAG
TGCGTGCTGCGGGGGAGTCGTGCTGTGGCGGCGACCCCTGTCCTTCGCAC
ATACACCATACATACAGTATGGTACACGCAAGAACACCACTCTATTAATA
GTGTCTCGAGAGTGACGGTTCATGAGTATTATGTCCCGGCAACGTAAATA
ACTGGGTGCGCTGTCGATTGCATCGCTTTCCACTTTCCGGAAAGCGGAAA
GTGGAAAGTACTTTAATTTACTATAATAATAGCAAATTAGAGTATAATCG
CTCTTATTCCAGGATACGGTATGCATACAGTATAATGTACTCAGTAGGTG
ACAAGGCAGTGTATGCCTGAATTTCGTTGTATACCCAGACCCACCATATC
GAATTCCAGGCCTGAGGGGAAGGAGGGGGAATGCCTTGCGGGTGTGAACG
TTTACACTACGCTGTTCCTGTTTATAGTCTGCCAGACTCCTGGCGAGAGC
TGTGTCTTAGAGGTTTGCGCCTTTGATTTTGCCGTGAGGGATCTTTCAGT
GATGTCGCCGGGTTGTTTGATTCTCTTGTTTAGGGAAGATACGGCACCGC
CCATACGAAATAAGTCGGTCCCTTCTACGAGCATGTTTTTGCTGGAGGAG
CGGACGTTATCATGCT back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1018:187181..205446+
>mRNA_A-nodosum_M_contig1018.27.2 ID=mRNA_A-nodosum_M_contig1018.27.2|Name=mRNA_A-nodosum_M_contig1018.27.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1266bp|location=Sequence derived from alignment at A-nodosum_M_contig1018:187181..205446+ (Ascophyllum nodosum dioecious) back to top