mRNA_A-nodosum_M_contig1018.24.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_A-nodosum_M_contig1018.24.1 vs. uniprot
Match: D8LHV2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV2_ECTSI)

HSP 1 Score: 437 bits (1125), Expect = 7.720e-145
Identity = 239/451 (52.99%), Postives = 287/451 (63.64%), Query Frame = 2

Query:  296 SASLPCLHFQALATFSSWVHRVARRETSGCRVDAAKVELYSIRDDGVEADGNFAQSGPLGNPRFPVRNEYLAGWALTQNNTDYLDRLLAMGYTVPGVSARLSTLSSDDGSSEDSRDRE---ELWGEATRALLHRVDVAHDRDQRRLAASSYWQRLQNAPRPSEHPPENAEAMSVTTD-----GSVFPSWAEVHALFEHDAGFVRRERERLMQEAAVSMPQ--GWRDGVVSRAWVASYRLSVFETRRQAQRFFSWAIPDEGALDCVLEPGKRVVEVGSGLGYWAHLLKMRSGDETRVRCFDPYAP-----TELITNLE---MGVEPSESNGDESASSESAGAENEDGEAEAWFGEERGPFTRTVRGSFEWIADDPGGFQNWSLFVCWPSDGQWPKACLQAFRGDDFFYVGEGEGGATRMPWKMLREEWQLERMVEIPRWPGFKDALWWYRRR 1594
            +++LP   F   +        +    +   R  +A+  L         AD      G L NPR PV NEYLAGWALTQ +T  L R   MGYT  G           + S E+++  +    LWGEAT+AL+ RVD+ HD DQRRLAAS YWQRLQ+ P P E P  N       TD     G   P+WA+V ALFE D GFVRRE ER ++EA   MP   GW    VSR WVASY+LSVFETRRQAQRFFSW IPDEGALDC+LEPG RV+EVGSGLGYWA+LLK+RSGD++RVRCFDP+AP     TE+ T  +     VE +     E+  S    +  E+ E + WFGE R PF+   RGSF+ IA + G F+ WSL +CWPSDGQWP  CLQ F G+DFFYVGEGEGGATRMPW++LREEW+L R VEIP WPGF+DALWWY R+
Sbjct:   26 TSTLPLCSFAGSSRLRWQDDTIGHSSSGASRRGSARWRLRPSAAAADAADEGADYEGRLDNPRRPVPNEYLAGWALTQYDTACLQRFQDMGYTDCG---------DQESSPEETKGEKAGFRLWGEATKALMDRVDIVHDLDQRRLAASRYWQRLQSTP-PKEAPASNTGNKGKFTDLDPSPGLAAPTWADVDALFESDNGFVRRESERYIEEAREGMPSEGGWSGDRVSRQWVASYQLSVFETRRQAQRFFSWGIPDEGALDCILEPGNRVLEVGSGLGYWAYLLKLRSGDDSRVRCFDPFAPPARQRTEVSTTEDESGYSVEEAPPRSIENVPSPEPISMREE-EVDDWFGEGREPFSPAERGSFDRIAREDG-FRKWSLLICWPSDGQWPAGCLQEFAGNDFFYVGEGEGGATRMPWRVLREEWELVRRVEIPTWPGFRDALWWYTRK 464

[Close]

BLAST of mRNA_A-nodosum_M_contig1018.24.1 vs. uniprot
Match: A0A6H5JT97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT97_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 1.560e-10
Identity = 68/221 (30.77%), Postives = 98/221 (44.34%), Query Frame = 2

Query: 1019 FSWAIPDEGALDCVLEPGKRVVEVGSGLGYWAHLLKMRSGDETRVRCFDPYAPTELITNL---EMGVEPSESNGDESASSESAGAENEDGEAEAWFGEERGPFTRTVRGSFEWIADDPGGFQNWSLFVCWPSDGQWPKA-----CLQAFRGDDFFYVGEGEGGATRM-----PW-KMLREEWQLERM--------VEIPRWPGFKDALWWYRRRGATPLPY 1615
            F+WAIPDE AL  +   G  +VE+GSGLGYWA LL+ R  D   +  +D  A T    +        +   ++ D    S + G   ED  A+   G+E   F   V      + ++P   +  SLF+C+P D +         CL AF GD   +VGE  G +  M     PW +   +E Q E          V +P WP  +D L  ++R     + Y
Sbjct:   81 FAWAIPDERALRIIKHFGP-IVEIGSGLGYWAKLLRARGVD---INAYDKVAGTPDTASAAPDSSRTKGKSTSKDAKVKSAAEGVVKED--ADEGGGDETPSFWIKVNEGGPDVLEEPCN-EGRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQSPWGRTTSQECQEELASKFHCILKVPLPSWPHSRDTLTVWKRHSFCSIQY 294

[Close]

BLAST of mRNA_A-nodosum_M_contig1018.24.1 vs. uniprot
Match: D8LFK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK6_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 7.090e-10
Identity = 72/226 (31.86%), Postives = 101/226 (44.69%), Query Frame = 2

Query: 1019 FSWAIPDEGALDCVLEPGKRVVEVGSGLGYWAHLLKMRSGDETRVRCFDPYAPTELITNLEMGVEPSESNG-----DESASSESAGAENEDGEAEAWFGEERGPFTRTVRGSFEWIADDPGGFQNWSLFVCWPSDGQWPKA-----CLQAFRGDDFFYVGEGEGGATRM-----PW-KMLREEWQLERM--------VEIPRWPGFKDALWWYRRRGATPLPYRQD 1624
            F+WAIPDE AL  +   G  +VEVGSGLGYWA LL+ R  D   +  +D  A T    +     + S++ G     D    S + G   ED  A+   G E   F   V      + ++P   ++ SLF+C+P D +         CL AF GD   +VGE  G +  M     PW +   +E Q E          V +P WP  +D L  ++R     + Y  D
Sbjct:   82 FAWAIPDERALRIIKHFGP-IVEVGSGLGYWAKLLRARGVD---INPYDKVAGTPDTASA--APDSSQTKGKSTSKDAKVKSAAEGDGKED--ADEGGGGEAPSFWIKVNEGGPDVLEEPCN-EDRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQSPWGRTTSQECQEELASKFHCILKVPLPSWPHSRDTLTVWKRHSFCSIQYDDD 298

[Close]

BLAST of mRNA_A-nodosum_M_contig1018.24.1 vs. uniprot
Match: A0A8J5D1W5_9CHEL (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5D1W5_9CHEL)

HSP 1 Score: 58.5 bits (140), Expect = 3.380e-5
Identity = 60/235 (25.53%), Postives = 93/235 (39.57%), Query Frame = 2

Query:  944 GVVSRAWVASYRLSVFE--TRRQAQRFFSWAIPDEGALDCVLEPGKRVVEVGSGLGYWAHLLKMRSGDETRVRCFDP--YAPTELITNLEMGVEPSESNGDESASSESAGAENEDGEAEAWFGEERGPFTRTVRGSFEWIADDPGGFQNWSLFVCWPSDGQ---WPKACLQAFRGDDFFYVGEGEGGATRM-PW-KMLREEWQLE--------RMVEIPRWPGFKDALWWYRRRG 1597
            G + R  +  +  SV E  + +  Q  FS++IP+E AL  V +  K ++ +GSG GYW HLL+    D   + CFD     P+E+        EP                                    TV  +F+             LF+ WP   +   +   CL  ++GD   +VGE  G    + PW +    E+QL         + +++P WPG  D+L  + R G
Sbjct:  553 GKIERLLLVKWIRSVEERDSSKSLQIKFSFSIPNEEALQAVKDLNKPIISMGSGTGYWEHLLENSGCD---IICFDKNNLYPSEMQYRHIQTGEP------------------------------------TVLKNFKKRV----------LFLSWPDADETSTFSMECLSEYQGDIIIHVGELFGSTQFVNPWGQSTTHEFQLALVKKFRKVKEIKLPNWPGHLDSLTIWNRIG 738

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig1018.24.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig1018.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D8LHV2_ECTSI	7.720e-145	52.99	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5JT97_9PHAE	1.560e-10	30.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LFK6_ECTSI	7.090e-10	31.86	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A8J5D1W5_9CHEL	3.380e-5	25.53	SWI/SNF-related matrix-associated actin-dependent ...	[more]