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Homology
BLAST of mRNA_A-nodosum_M_contig1017.3.1 vs. uniprot
Match: D7G0P3_ECTSI (Imm downregulated 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0P3_ECTSI) HSP 1 Score: 316 bits (809), Expect = 1.620e-87 Identity = 226/483 (46.79%), Postives = 287/483 (59.42%), Query Frame = 1
Query: 2116 SHTEMIPTSMVMDQISAIQRVIDSIDERVAVIEGINMDRDVEVSPQATPEGLTAEQAAAFV-----RKAKEETQSRLIAEMLALEERVDKRAQEEAKRLRDEREADATRSSMRRVSATVSAYTTDLATRLEELQADHEKQGTEVARAAEEIVATDTSVKNLGSELVVLGEVANKMSIAVDDKADQTDVEALKLAMQKLDAT--NKAQGASA-ATREAEALDALQTALNNMSIRMEGSIQKLQKTQSSAGTIKMKPLLDRVMQELTAAGMLPDPDLGEGAIGRSLCLSCNRPMNMAMEHRPKTFTSQFRG-TLGSRMEHAAFRSPK-VEKPAAIWRGGFRMPASK--GNQHDWIRT----------------RTAGRSGATSGQRFSQGGTVMNAQQ-------PPSDFRFG--GESARYDANFVEEKLPGLPNVRDSVRREGRPSSGGIPSSRGTRAV----------KLRATSEAPYRGRFV 3423
S E I ++ D+I ++R + + ERVA +E A GL+ E+AAA R A EETQ+RL AEM ALEERVD+RA+EEA+ R +MRRVSATVSAYT DLATRL+ L+++HE+QG V R AEE+ A + ++ LGSELV LG+VAN +S+ VD KADQTDVEALK AMQ+LDAT KA+G+SA A R+AEA+ ALQ A +MS MEGSI+KLQ+ Q++AG+IK+KPLLDRV++ELT AGMLPDPD G+GA+GRS+CLSCNRPM +A + F SQFRG TLGSRME + +P + KP+ IWRGGF+MP + + H+ R TAG G PPSD G G A D +LPG+PN+ DS GR + GG G V L A+S+AP+RGRFV
Sbjct: 432 SRIEEILAGVLGDEIPTLRRDLGGVTERVAHLEA------TVAEDGAGGAGLSVEEAAAAAADAASRLANEETQARLAAEMSALEERVDRRAREEARXXXXXXXXAEARGAMRRVSATVSAYTADLATRLDGLKSEHEEQGAVVTRTAEELAAAEAGLRTLGSELVGLGQVANSVSMVVDGKADQTDVEALKHAMQRLDATVTAKARGSSATAARDAEAMGALQVAFRDMSASMEGSIRKLQQAQAAAGSIKVKPLLDRVVKELTEAGMLPDPDAGQGAVGRSMCLSCNRPMTVAGDQSSSRFASQFRGGTLGSRMEKMSSNNPMHINKPSVIWRGGFKMPPHRVPASAHERQRXXXXXXXXXXXXXXXXXETAGAVGDGXXXXXXXXXXXXXXXXXXXXQILPPSDEVLGPGGIDASRDG-----RLPGIPNMLDSTSAGGRETGGGAGVVGGVVGVGGRNKRVSVGSLAASSDAPHRGRFV 903
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 4136 |
| Hectar predicted targeting category | other localisation |
| Exons | 9 |
| Ec32 ortholog description | imm downregulated 18 |
| Ec32 ortholog | Ec-14_001740.1 |
| Cds size | 3396 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866377.3985608-UTR-A-nodosum_M_contig1017:149033..149126 | 1680866377.3985608-UTR-A-nodosum_M_contig1017:149033..149126 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1017 149034..149126 + |
| 1680866377.5122075-UTR-A-nodosum_M_contig1017:157648..158295 | 1680866377.5122075-UTR-A-nodosum_M_contig1017:157648..158295 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1017 157649..158295 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866377.41191-CDS-A-nodosum_M_contig1017:149126..149367 | 1680866377.41191-CDS-A-nodosum_M_contig1017:149126..149367 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1017 149127..149367 + |
| 1680866377.4243107-CDS-A-nodosum_M_contig1017:150465..150710 | 1680866377.4243107-CDS-A-nodosum_M_contig1017:150465..150710 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1017 150466..150710 + |
| 1680866377.4368207-CDS-A-nodosum_M_contig1017:150968..151694 | 1680866377.4368207-CDS-A-nodosum_M_contig1017:150968..151694 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1017 150969..151694 + |
| 1680866377.4480228-CDS-A-nodosum_M_contig1017:153088..153414 | 1680866377.4480228-CDS-A-nodosum_M_contig1017:153088..153414 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1017 153089..153414 + |
| 1680866377.4576194-CDS-A-nodosum_M_contig1017:153823..154238 | 1680866377.4576194-CDS-A-nodosum_M_contig1017:153823..154238 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1017 153824..154238 + |
| 1680866377.46824-CDS-A-nodosum_M_contig1017:154598..155174 | 1680866377.46824-CDS-A-nodosum_M_contig1017:154598..155174 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1017 154599..155174 + |
| 1680866377.480189-CDS-A-nodosum_M_contig1017:155660..155858 | 1680866377.480189-CDS-A-nodosum_M_contig1017:155660..155858 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1017 155661..155858 + |
| 1680866377.4887154-CDS-A-nodosum_M_contig1017:156312..156488 | 1680866377.4887154-CDS-A-nodosum_M_contig1017:156312..156488 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1017 156313..156488 + |
| 1680866377.5002213-CDS-A-nodosum_M_contig1017:157155..157648 | 1680866377.5002213-CDS-A-nodosum_M_contig1017:157155..157648 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1017 157156..157648 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1017.3.1 >prot_A-nodosum_M_contig1017.3.1 ID=prot_A-nodosum_M_contig1017.3.1|Name=mRNA_A-nodosum_M_contig1017.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1132bp
MAGEDQEDVAVIEDVITEPAVPATPREQRVGSTGDLPLTFKLQSSCTLQE
AWPISLLDEGDLKDGGKNLVVFTIDVHHLDEIVKVMHTQINILKQTILDL
CQGAALDNSNRADEVRILRSKIDALEKVPPSLPATSESLDEQNRQRFSNV
EGRIGALEQAALDLRQQKIHDEPKSLGSSKFLEQRLSNLETTIHGRSSDD
IALENTATNSGSALALGDETIGRSGGGGADDEGATNLEATIHGKSSDEIA
LGDTAAKSGSALALGGETIDRSRGGDADDESATNLEATIRGRSSDEIALG
DTAANSGSALALSNEKIDRSRGGAADDESATNLRATIRGRSLDEIALGDT
AANSGAALALGDEKIDRSGGGDARDENANGNESVAKRSNIPDCLVRSVSL
LQDQVSSLLEDKRSAELADRLATLETKLVAFGTWEEEAVAQRRQALVRLL
RRAAFLRDMLIAEGITEGQEVTSEEGDTWCNVADEDPAEGREEEMRDETK
AETHDLWLMACERVAWLDAHAVASVPMYDTPCDGNISVDDAFRRSGSSLR
NDQIDREVDGMNTDSPEDSARGSTLVNHIPRANPDDDGHGMMASLEPMEG
SLNEVCPGGDQKGGGGASRDEQNLEILSCWMDAIENRIYQMITDRRNMQL
QMEQARARSASVVVATSTGDSDDQSHTEMIPTSMVMDQISAIQRVIDSID
ERVAVIEGINMDRDVEVSPQATPEGLTAEQAAAFVRKAKEETQSRLIAEM
LALEERVDKRAQEEAKRLRDEREADATRSSMRRVSATVSAYTTDLATRLE
ELQADHEKQGTEVARAAEEIVATDTSVKNLGSELVVLGEVANKMSIAVDD
KADQTDVEALKLAMQKLDATNKAQGASAATREAEALDALQTALNNMSIRM
EGSIQKLQKTQSSAGTIKMKPLLDRVMQELTAAGMLPDPDLGEGAIGRSL
CLSCNRPMNMAMEHRPKTFTSQFRGTLGSRMEHAAFRSPKVEKPAAIWRG
GFRMPASKGNQHDWIRTRTAGRSGATSGQRFSQGGTVMNAQQPPSDFRFG
GESARYDANFVEEKLPGLPNVRDSVRREGRPSSGGIPSSRGTRAVKLRAT
SEAPYRGRFVPGPRAGGSSGTRPIVSNGRRI* back to topmRNA from alignment at A-nodosum_M_contig1017:149034..158295+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1017.3.1 ID=mRNA_A-nodosum_M_contig1017.3.1|Name=mRNA_A-nodosum_M_contig1017.3.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9262bp|location=Sequence derived from alignment at A-nodosum_M_contig1017:149034..158295+ (Ascophyllum nodosum dioecious)
ATCATGTGTACCCTGTGCTTGCACAAGTACACTATTGTACCAGGTTGGCG
GTTGATGTGACGCGGCGACGTCCTTCCATAAACGTCGGTAGCGATGGCGG
GTGAAGATCAGGAGGATGTTGCTGTAATCGAGGACGTGATCACAGAACCT
GCGGTACCGGCGACTCCACGGGAACAACGCGTTGGAAGCACTGGTGACCT
CCCGCTTACTTTCAAACTGCAATCATCGTGTACTCTGCAGGAAGCGTGGC
CGATAAGCTTGTTGGACGAGGGGGATTTGAAGGACGGCGGAAAAAATTTG
GTCGTCTTCACCATCGATGTGCACCATCTCGATGGTGAGATTGTGGAGTG
TTTGTATCCAATCATGCTCGCTGTTCGTTTTCTCGGCCATGGTGCAACCC
GTGAACGTCGGCCGGATGGACACTTCTAATACCTGTAGATATTTTGCCAC
GTGTAACATACAAATTCTCAGGCGCGAACGGGGACAGGGAAAAATCATTT
CCCTGTTCAGCTGACCACGAGCAGGACTGGTAACCTTACCCGGTTGATCC
ATGTAGCGATGACCATAAATACACGTCGGTACTTTCAGCATGCCCACTTC
ATACCAATAGTGGGTGTGGGAAAAAGAGGTGCATGTCAATTGGTCCATGG
TGACCTGCCAATAAGGGCAGCACCCATTTGGAACTACCTTGAGGTTTACT
GGCCCAGTGCCGGCGGACTCTCGGCAGTGAACGTCATCGGTACGCAATTG
CGGGACCCGATGAACTCGGGACTGACCCGCTGGCGTGTGGCGGTTTAAAT
AAAAAAAAATGGACGCCGCCGCGGAAATCGGGAGGAATCCCGTAAGTAAG
CACCAGATTCAGCCTGAGTATGGAGATGAACAGGCTGACGCGGGACGGGG
CTGCCGAACCCGTCTCGCGAGACCAAATTCTCAGGCGCGAGCGGGGACAG
AGAAATATTTATTTTTCCTGTTCAGCTGACCACGACCAGGATTGGCAATC
TTACCCGGTTGATCCTCACTCTTCCTATATGTGATCAACATACATTATAC
ATACATACTACCACGTGCCAGCGTCGCTACCTTCAAGGCCTTCACGTCCG
GCGCGAGCTCAAAAATCTCATGACCTGGGGAAATCATGCTGAATCGGGGC
AGATATTCGGCACAGCTTGTACGGTAGTCGATTCGTCGACGACAAGCTGC
GTTCAGATTTTTCTTCAAGTAATGCGTTGACGTAGTAAGTTCGCGGAGGG
CACAGATCAGTTGTGCCACTTTCACGAGAATTGGGTATACTTGAAAGCTT
CACGCTTACAGTGGCTTAAAAGTAGTCCGCATCGATGGCCCAAAATCATC
GTCGCGAGATGCAATCGTCACATTTGAGGTCCATAATGTTTCTGTCAACA
ACCCCCCCCCCCCCCCGCGAACTTCCGAACAGAAATCGTCAAGGTAATGC
ACACCCAGATCAACATACTTAAACAAACGATCCTAGATCTGTGCCAAGGA
GCAGCTCTCGATAATTCAAATCGTGCCGACGAGGTGCGCATCCTCCGCAG
CAAGATTGACGCTCTGGAGAAGGTTCCACCATCGCTGCCGGCAACGTCCG
AGAGTCTGGACGAACAAAACCGCCAGAGGTTCAGTAACGTGGAAGGGAGG
ATAGGGGCGCTGGAGCAGGCTGCCTTGGTGAGAAACTCATCTCCTTCATT
CTTTGTTCTAGATCTCGTAAAAATCGGTCAAACGAGTTAGTTACGCTCCC
GGGAGATCGCGGGCTACACAGTCAGGGGCTGAGGGTAACTGCTTCTTGTG
GTCGCTTTCAAGACATGTCCGATGTTGCATTTAACGCAACCGCTATGGTA
CTCATACCGCTCCGTCTCCGGGCTAATTCACGTAATCACTACCACCTTCA
TACAGCATGTCGAGTCATGAATACACACCTGGCAGGACCTGCGACAGCAG
AAAATTCACGACGAGCCGAAAAGTCTAGGCAGCAGCAAATTCTTGGAACA
GAGGCTCTCAAATCTCGAGACCACCATTCACGGGAGGTCTTCGGACGACA
TCGCTTTAGAAAATACCGCTACCAACTCGGGCTCAGCGCTGGCTTTGGGC
GACGAGACGATCGGTCGCAGCGGAGGAGGCGGCGCTGACGACGAGGGTGC
AACAAATCTCGAGGCCACCATTCACGGCAAATCTTCGGACGAAATCGCTT
TAGGAGATACCGCTGCCAAGTCGGGCTCAGCGCTAGCTTTGGGCGGCGAG
ACGATCGATCGCAGCAGAGGAGGCGACGCTGACGACGAGAGTGCAACAAA
TCTCGAGGCCACCATTCGCGGGAGATCTTCGGACGAAATCGCTTTAGGAG
ATACCGCTGCAAACTCGGGCTCAGCGCTGGCTTTGAGCAACGAGAAAATC
GATCGCAGCAGAGGAGGCGCCGCTGACGACGAGAGTGCAACAAATCTCAG
GGCCACCATTCGCGGGAGATCTTTGGACGAAATCGCTTTAGGAGATACCG
CTGCCAACTCGGGCGCAGCGCTGGCTTTGGGCGACGAGAAAATCGATCGC
AGCGGAGGAGGCGACGCTCGCGACGAGAATGCAAACGGCAACGAGAGCGT
TGCCAAGCGTAGCAACATACCGGATTGCCTTGTACGGTCGGTTTCACTGC
TGCAAGACCAGGTGTGTGCCCCCCAAGGAAAGCTACGCGGGCATAAATAT
TGGCACTGTTTTCTTCGAGCTCGGAAGGCCACAAGTACGTAGAAAATAAG
AGTACGTTGGGTGGCCATCAGCCATAGTCCTCGCCGGGACGCACGCATGA
ACTTCGGATCGAGGCTCATTGTCACTCCTCATAGAGGGGTGACATTCCAA
GACATTAGTCTTTCGGTTTCTTGTGGGTGTCTATTTGTTGTTACCAAGCC
AAGCCGCAATTTTTTCTATACACCAATGCTACGCAGCACCTACGAGGTAC
AGTAGTTTTTCATTCCTGTCGCATTCTGTGGTTCTGCTGTGTATCGAGTG
CGGCTCAACTTGTTTGTTAGCGGCTAAACCATTGGACCAATCAGTCACGT
GGCTGAGTAGTCCAATGGTTTTGCCGACAACGAACGAAATATGTGTCTTG
GGCTCTCTGACCTCTTTTCCCGGTAGCGACAGTGATCTCCGGGGCACTCC
CCTCGCCACAGCTATCTTCCAGGGGAGAAGGGGGAAAATGCCTGAAATTG
GGCTTTTCATCATGCAGAATATTCCAGTCAATCGATTTTTTGAGAATAGG
TTCCATCCCACATCTGGATATTCTATGTGAATCTGACGCAAAGGGAATAA
AGTTAATAATTCTACCAAGTGTTTTTTCACCTGCAGGGGTTTTCTAATGA
GGCCCCACCTCGTTCGAGAGCCCAAAACCTCCGTTTCGACTACTTTCTTC
TGGAACAGAGAGAAGCTACTCAAGCCACTTGTCTTGAGAAACTAACACTA
ATGTCGAACAGAAAATGCCATTTAGCATCCTCCAGAAAATCTTCTGGGCG
TAAAACGACCGAATGAGCCCTAAGCTCCGTCGAGGGATTCAGATAGAGGG
CTCCAGCCTTGATCATTTCCCGCTCCCCCAGAATTGCAGATCGAGTGTTC
ACCGACTTGGGCACTTTTTGATGCAAGGCGCCTCATTGCACGAGAAAAGA
TAGGAAATCTTACAGTTAATACGGTATCTCGAATAGGCGAACACTCGATC
TGCAAGTCTGGATATGTAAGCGGGAAAGTGGTTCAAAAACGCTTAGAGCC
ACGACGCTGACTCTGCCCACGGAGTCGGATTACCAGGTTATTCGGTAGTG
TAAGACGCGCCGGAAAATATGACGCCATGTGCACCATGGCACTCTTGTTC
GGCATAAACTTTACCTGGCATTTCTTATAAGGAGTGATCTCACGCAGCAA
GTTTCATCCAGTAAGAACTATCTACCGCATTTCAAAGGATTTGTCGATCT
GCGTTGCTTGTCGCTCGATTGATTTACCGCGTTCGGAAGACCCATACATT
ATCCGGGCGAAATTAACCCTTTAAATTGTCTGGGGGCAACTTATTGTGGG
ATCAGGTCAGTAGCCTGTTGGAAGACAAGCGCTCTGCCGAGCTGGCTGAC
CGCCTGGCCACACTCGAGACCAAGCTCGTGGCTTTTGGCACCTGGGAGGA
GGAAGCCGTGGCCCAGAGGCGACAAGCCCTTGTTCGGTTGCTTCGGCGTG
CGGCTTTCCTACGAGACATGTTGATCGCTGAGGGGATCACCGAGGGGCAA
GAGGTCACATCCGAGGAGGGCGACACATGGTGCAATGTAGCAGATGAGGA
CCCTGCAGAGGGAAGAGAGGAAGAGATGCGTGACGAGACGAAAGCCGAGA
CGCACGATCTTTGGCTGATGGCATGCGAAAGGTGGGGTACGTCGCTGCTT
CTCGCTACGTTTGGCCCCTTTGGGAGCTGTGATTCGGTCCTGCGGACAGG
ATGATGCTTGAGCTGGCGTGTGTGAACTGTTTTGTACTCCCCCAAAACTT
GTAGCTCTGCCTCTCGCACAATGCTTGGATTACCGGCAACCCGGCGTCAA
ACGCATACACAGTGAAACCTTATCACGACCTTAAATCCGTTGTACGCAGT
CTTCGTCACCGGTTGTCGTGCAGCGATGTTTTTCTGAGTCGCAATATAAT
ATGCCGATTTTTTGTGGTGCCCACCCAAGGACGCCGAGGGTGATCGCTAT
GACTCACAGTTTGGCCATGCGCCCTGCATCTCGGCTGTTGGATGTGTCCC
CTTCATTGCCCGTACATGTCCCGACTACGCGACGAAGCAGGGTGGCATGG
CTCGATGCCCACGCCGTGGCAAGCGTCCCAATGTATGACACCCCATGCGA
TGGAAATATTAGCGTCGACGACGCTTTTCGACGGAGCGGGTCGTCGCTAA
GGAACGACCAAATTGATCGCGAGGTCGACGGTATGAATACTGACAGCCCT
GAGGACAGCGCGCGAGGAAGCACTCTAGTTAATCACATCCCACGCGCTAA
TCCTGATGACGACGGGCACGGAATGATGGCAAGCCTGGAGCCGATGGAAG
GTTCGTTGAACGAGGTCTGCCCTGGAGGAGACCAGAAGGGCGGAGGCGGG
GCGAGCCGGGACGAACAAAACCTAGAGATCTTGAGTTGTTGGATGGACGC
GATCGAGAACCGAATCTACCAAATGATCACCGACAGAAGGAACATGCAGT
TACAGGTATGATAGGTATAGTAATAGCATTCTGATCTTTGAGGAATACGA
AGGGACGTTCTTATTCTGTGTAGCGTTCGCGAGAGTTCAAAGGAATGATC
CAAGGTACTCCTCGGAGAGCGGGGTGGAACCGAACCCTATTTTTTCAATA
TTGTAGACGGTATACGCGCATGGACGGTGCGCGACACCCTCCTCCCCCCC
CCTCCCATCCCTTCTTACCACGGTGGTAGACAAAAAAGACGTCGGCACAA
GCTTCTGATCACTCCGCATTTACCTCTCAAGCGCTCTTGCTCGGTCGTAT
GCCCTCACCTCATCAACGGTATGGTCTCGCTCGGCACCTGGATTGGTGCC
CTTGAGGTCATCCAGATGGAGCAAGCGCGAGCGCGCTCGGCGTCGGTAGT
CGTCGCCACTAGCACCGGCGATAGCGACGATCAAAGCCATACTGAAATGA
TACCGACGAGCATGGTAATGGATCAAATAAGCGCGATCCAACGGGTCATT
GACAGCATCGACGAACGTGTCGCAGTAATCGAGGGGATCAACATGGACAG
AGACGTTGAAGTGAGCCCACAGGCAACTCCAGAGGGTCTGACGGCGGAGC
AGGCGGCCGCGTTTGTGCGCAAGGCTAAGGAGGAGACTCAGTCTCGGCTG
ATCGCGGAGATGCTGGCGCTGGAGGAGCGAGTGGATAAGCGAGCCCAGGA
GGAGGCCAAGCGGTTGAGGGACGAGCGTGAGGCAGACGCAACCCGTAGTT
CGATGAGAAGAGTCTCGGCGACGGTTTCAGCTTATACCACTGATCTAGCG
ACGCGGCTAGAAGAACTACAAGCAGACCATGAAAAGCAGGGGACAGAAGT
GGCGCGAGCTGCTGAGGAGATTGTGGCTACTGATACTAGCGTAAAGAACT
TGGGGTCGGAGCTAGTTGTCTTAGGCGAGGTGGCGAATAAGGTGAGAACA
TGGTATCACGCGGAGATCAAGGGCGTGAACGATATGCAAAGTATCGGCCT
CGAAAGATAGAGGCAAGGCGTGCGCTAGGGCTCAATACCATGACCAACTC
GATGGCTCGAGGGCACAGGCAGTCGCGTTACGACAAGTGACAATGACATA
GAAAAGATCGTCTGACGGCCGAGATGTAAAGGAAACTTATATTTCGTTCA
TTAAGCAGAAGCGACCTGTCTAGGTGGACGCTCGAGAGAAGAACCTGTTC
GTCACAAGCGAGCGTCGCAAAGGAAACAGTTGAAATACTAGTTGTGTTTT
GCCCTATTGAACTGCAACCGGCGGTGCTCTTTCTGGCACGCTTAGGGCGT
GTCGATCAAAAGCGCCAGCGCCGTGGTTTCCCCGTCGTTTCTGAAGAAAA
TCCCCCGTCCGCGTACGTCTCTCTCGCCCTCATTTGCCATCTCCCGTCTG
GTATGTGTCGACCTACCTACTGGAAAGATGTCGATCGCCGTTGACGATAA
GGCGGATCAAACGGATGTTGAGGCTTTGAAGCTGGCGATGCAAAAGCTGG
ACGCCACGAACAAGGCTCAAGGCGCGTCCGCTGCGACGCGGGAGGCCGAG
GCCCTTGACGCCTTACAAACCGCCCTCAACAACATGTCCATCAGGATGGA
GGGAAGCATTCAGAAGCTCCAGAAGGTGCTCCGGGCTACAACGGTTTTCG
TTCCTCTGCTCTGTTCGTGTGAATTCGCTTGCGAGATTTGAAGGTGTGTC
GCTTTCTTCGGTAGCATGCTCTGGACGCGGAACAACCTACCCGATGGTTG
GTCTGCCAGGGGTGGGAGGGCTGAAAATTGAAGCAGGATTCGGAAAAATA
CCATAGCCGTAGAGCTTGGAGGGAGGAGGCAAAGAAATAGCACGCTGATG
GATACCGGTCTTGTTCTTAGATAAACCTGGGGCTTTCGAGGCCCTTAGGG
GTGGGTGGGTGGGTTTATTCCTCTCCCATATATTATTACCTTCTCTCGCT
GATGATAGCGTCCGCACGAAGTTTCCAATATGCTGCTAGAGGATAGTCCG
TGTATCGTTCGGACCGCAAGACGACCTGAAACCTCTTGGCGTTTCTATCG
TTTGCGTTCATGCGGTGTGTCCCGCGAAGACTCAATCGTCAGCTGGAACG
ATCAAGATGAAGCCCCTGCTTGACCGAGTGATGCAGGAGCTGACAGCCGC
CGGGATGCTGCCAGACCCCGACTTGGGCGAGGGGGCTATTGGGCGGTCTC
TGTGCCTTTCGTGCAACCGACCAATGAATATGGCCATGGAACACCGGCCA
AAAACGTAGGTTGAGCAAGCAACGCCGCACTTGATTTCGAATTTTGACAT
CCGCTCCGATGACGTTCAAAACGGCAACATGGACTGTTATGAAACGACCA
TGCCTACGAGGTACACAAGCGGTTTCTGTACGCATGGTTTTCTCGTACAA
ACATGAACAAGTGCGGACCGGCCCTCCACACAAACTGCCTCCGGTACTTT
CAACATGCCCACCTCACCTCATACCAATAGCGAAGAGAGGCGCACATTAT
TACTAACTGGTCTACGGTGACCTGCAAAGGCAGCACCCGTTTGGAACTAC
CTTGAGGTTCACTGGCCCTGTGCCGGCGGACTCTCGGCAGCGAACGCTAT
CGGTACGCAATTGCGTGACCCGATAAACTCGAGACTGACCCGATGGCGTA
TGGGCGTATAAATAAATGGACGCCGCCGCGGAAATCGGGAGGAATCCCGT
GAGTAAGCACCAGATTCAGCCCGAGTATGGAGAATGAGCAGGCTGACACG
GGATGGGACGGCCGAATCCGTTTCGCGAGACCAAATCCTCACGCGCGAAC
GGTGACAGGGAAATATTCATTTTCTCTGTTCTGCTAACCACGAGCAGGAT
TTGCAACTGATCCATACTCTGCTATGTGTGACGACCATACATGCATTACA
CACGCGCCCTCTTACACACCAGGTTCACCTCCCAGTTCCGAGGTACGCTC
GGATCCCGCATGGAGCACGCGGCATTTCGATCGCCAAAGGTCGAAAAACC
AGCGGCAATCTGGCGCGGCGGGTTTCGGATGCCGGCGAGTAAGGGAAACC
AACATGATTGGATTCGCACCCGGACGGCGGGGAGATCTGGTGCTACGAGC
GGGCAACGTTTCTCACAAGGAGGTACGGTTATGAATGCGCAGCAGCCACC
GTCGGATTTCAGGTTCGGGGGGGAATCGGCACGATATGACGCCAACTTCG
TCGAGGAAAAGCTCCCTGGGCTTCCGAACGTGCGCGACAGTGTCCGGCGG
GAAGGCAGACCCTCCAGTGGTGGGATCCCGTCGAGTAGGGGGACGAGGGC
CGTAAAACTCAGGGCGACATCCGAGGCGCCGTACCGCGGTAGGTTTGTTC
CGGGCCCACGCGCTGGTGGCTCTAGCGGTACGCGGCCGATCGTTTCGAAC
GGCCGGAGGATATAACGTTTTTTCGCGTAGCGTGAAGTTAATGATGCTAT
CACCGGGTGTCTGTCGCGGTAGAAAAGTTGATTTGGGAAGGAGAGCTTAG
GTAGATTTTTGCCTTTCACGCTCACGGCAAAGAGCCGCACAACTTTGTGT
TTGATCCCTTCGAAGATTGATGTTCGTGGCTGTGGCTGCCCTAAGCTTCT
GTAAATAGCATAAGCTTTTGGGGGGTAAAGTATCCGGTTTAGGCACCTTT
TATATCGCCTTTTTGTTAAGGGTGTTGTCACGGCTTTCCTCCAATGCCAG
TGTGTATTAGGATTCGCAATTTTCGATTTGTCTTCACAATGGAGTATACT
CAAAATAAGCAGGAAGTTCACCTACGCCAACGCATCAGCGGAAGTTCACC
TACGCCAACTCATCAGCGGAAAGTTCGTAGCGGTTTCATCTTTGCCCAAG
AAAAAGTTATGTGTGCGTGTCTGTTGTCAGACAACGCGTGTAAGCAACTG
TACAAAGCTTCCGCTAGCGCACATGTGGTGTCATAAATGCGTATAAAAAT
TGACGAACTCTTGTGGACTTCTTGACCACGAAATCTGTAATCAGGTGTTA
GACTATATACTAGGGACAATCTTCTATGTTGTACTATCTAAGAATATAAA
ATTAATCCTTGC back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1017:149034..158295+ >mRNA_A-nodosum_M_contig1017.3.1 ID=mRNA_A-nodosum_M_contig1017.3.1|Name=mRNA_A-nodosum_M_contig1017.3.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=3396bp|location=Sequence derived from alignment at A-nodosum_M_contig1017:149034..158295+ (Ascophyllum nodosum dioecious)
ATGGCGGGTGAAGATCAGGAGGATGTTGCTGTAATCGAGGACGTGATCAC
AGAACCTGCGGTACCGGCGACTCCACGGGAACAACGCGTTGGAAGCACTG
GTGACCTCCCGCTTACTTTCAAACTGCAATCATCGTGTACTCTGCAGGAA
GCGTGGCCGATAAGCTTGTTGGACGAGGGGGATTTGAAGGACGGCGGAAA
AAATTTGGTCGTCTTCACCATCGATGTGCACCATCTCGATGAAATCGTCA
AGGTAATGCACACCCAGATCAACATACTTAAACAAACGATCCTAGATCTG
TGCCAAGGAGCAGCTCTCGATAATTCAAATCGTGCCGACGAGGTGCGCAT
CCTCCGCAGCAAGATTGACGCTCTGGAGAAGGTTCCACCATCGCTGCCGG
CAACGTCCGAGAGTCTGGACGAACAAAACCGCCAGAGGTTCAGTAACGTG
GAAGGGAGGATAGGGGCGCTGGAGCAGGCTGCCTTGGACCTGCGACAGCA
GAAAATTCACGACGAGCCGAAAAGTCTAGGCAGCAGCAAATTCTTGGAAC
AGAGGCTCTCAAATCTCGAGACCACCATTCACGGGAGGTCTTCGGACGAC
ATCGCTTTAGAAAATACCGCTACCAACTCGGGCTCAGCGCTGGCTTTGGG
CGACGAGACGATCGGTCGCAGCGGAGGAGGCGGCGCTGACGACGAGGGTG
CAACAAATCTCGAGGCCACCATTCACGGCAAATCTTCGGACGAAATCGCT
TTAGGAGATACCGCTGCCAAGTCGGGCTCAGCGCTAGCTTTGGGCGGCGA
GACGATCGATCGCAGCAGAGGAGGCGACGCTGACGACGAGAGTGCAACAA
ATCTCGAGGCCACCATTCGCGGGAGATCTTCGGACGAAATCGCTTTAGGA
GATACCGCTGCAAACTCGGGCTCAGCGCTGGCTTTGAGCAACGAGAAAAT
CGATCGCAGCAGAGGAGGCGCCGCTGACGACGAGAGTGCAACAAATCTCA
GGGCCACCATTCGCGGGAGATCTTTGGACGAAATCGCTTTAGGAGATACC
GCTGCCAACTCGGGCGCAGCGCTGGCTTTGGGCGACGAGAAAATCGATCG
CAGCGGAGGAGGCGACGCTCGCGACGAGAATGCAAACGGCAACGAGAGCG
TTGCCAAGCGTAGCAACATACCGGATTGCCTTGTACGGTCGGTTTCACTG
CTGCAAGACCAGGTCAGTAGCCTGTTGGAAGACAAGCGCTCTGCCGAGCT
GGCTGACCGCCTGGCCACACTCGAGACCAAGCTCGTGGCTTTTGGCACCT
GGGAGGAGGAAGCCGTGGCCCAGAGGCGACAAGCCCTTGTTCGGTTGCTT
CGGCGTGCGGCTTTCCTACGAGACATGTTGATCGCTGAGGGGATCACCGA
GGGGCAAGAGGTCACATCCGAGGAGGGCGACACATGGTGCAATGTAGCAG
ATGAGGACCCTGCAGAGGGAAGAGAGGAAGAGATGCGTGACGAGACGAAA
GCCGAGACGCACGATCTTTGGCTGATGGCATGCGAAAGGGTGGCATGGCT
CGATGCCCACGCCGTGGCAAGCGTCCCAATGTATGACACCCCATGCGATG
GAAATATTAGCGTCGACGACGCTTTTCGACGGAGCGGGTCGTCGCTAAGG
AACGACCAAATTGATCGCGAGGTCGACGGTATGAATACTGACAGCCCTGA
GGACAGCGCGCGAGGAAGCACTCTAGTTAATCACATCCCACGCGCTAATC
CTGATGACGACGGGCACGGAATGATGGCAAGCCTGGAGCCGATGGAAGGT
TCGTTGAACGAGGTCTGCCCTGGAGGAGACCAGAAGGGCGGAGGCGGGGC
GAGCCGGGACGAACAAAACCTAGAGATCTTGAGTTGTTGGATGGACGCGA
TCGAGAACCGAATCTACCAAATGATCACCGACAGAAGGAACATGCAGTTA
CAGATGGAGCAAGCGCGAGCGCGCTCGGCGTCGGTAGTCGTCGCCACTAG
CACCGGCGATAGCGACGATCAAAGCCATACTGAAATGATACCGACGAGCA
TGGTAATGGATCAAATAAGCGCGATCCAACGGGTCATTGACAGCATCGAC
GAACGTGTCGCAGTAATCGAGGGGATCAACATGGACAGAGACGTTGAAGT
GAGCCCACAGGCAACTCCAGAGGGTCTGACGGCGGAGCAGGCGGCCGCGT
TTGTGCGCAAGGCTAAGGAGGAGACTCAGTCTCGGCTGATCGCGGAGATG
CTGGCGCTGGAGGAGCGAGTGGATAAGCGAGCCCAGGAGGAGGCCAAGCG
GTTGAGGGACGAGCGTGAGGCAGACGCAACCCGTAGTTCGATGAGAAGAG
TCTCGGCGACGGTTTCAGCTTATACCACTGATCTAGCGACGCGGCTAGAA
GAACTACAAGCAGACCATGAAAAGCAGGGGACAGAAGTGGCGCGAGCTGC
TGAGGAGATTGTGGCTACTGATACTAGCGTAAAGAACTTGGGGTCGGAGC
TAGTTGTCTTAGGCGAGGTGGCGAATAAGATGTCGATCGCCGTTGACGAT
AAGGCGGATCAAACGGATGTTGAGGCTTTGAAGCTGGCGATGCAAAAGCT
GGACGCCACGAACAAGGCTCAAGGCGCGTCCGCTGCGACGCGGGAGGCCG
AGGCCCTTGACGCCTTACAAACCGCCCTCAACAACATGTCCATCAGGATG
GAGGGAAGCATTCAGAAGCTCCAGAAGACTCAATCGTCAGCTGGAACGAT
CAAGATGAAGCCCCTGCTTGACCGAGTGATGCAGGAGCTGACAGCCGCCG
GGATGCTGCCAGACCCCGACTTGGGCGAGGGGGCTATTGGGCGGTCTCTG
TGCCTTTCGTGCAACCGACCAATGAATATGGCCATGGAACACCGGCCAAA
AACGTTCACCTCCCAGTTCCGAGGTACGCTCGGATCCCGCATGGAGCACG
CGGCATTTCGATCGCCAAAGGTCGAAAAACCAGCGGCAATCTGGCGCGGC
GGGTTTCGGATGCCGGCGAGTAAGGGAAACCAACATGATTGGATTCGCAC
CCGGACGGCGGGGAGATCTGGTGCTACGAGCGGGCAACGTTTCTCACAAG
GAGGTACGGTTATGAATGCGCAGCAGCCACCGTCGGATTTCAGGTTCGGG
GGGGAATCGGCACGATATGACGCCAACTTCGTCGAGGAAAAGCTCCCTGG
GCTTCCGAACGTGCGCGACAGTGTCCGGCGGGAAGGCAGACCCTCCAGTG
GTGGGATCCCGTCGAGTAGGGGGACGAGGGCCGTAAAACTCAGGGCGACA
TCCGAGGCGCCGTACCGCGGTAGGTTTGTTCCGGGCCCACGCGCTGGTGG
CTCTAGCGGTACGCGGCCGATCGTTTCGAACGGCCGGAGGATATAA back to top
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