Homology
BLAST of mRNA_A-nodosum_M_contig1016.2.2 vs. uniprot
Match:
D7G6G8_ECTSI (Dynein 18 kDa light chain, flagellar outer arm n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6G8_ECTSI)
HSP 1 Score: 245 bits (626), Expect = 6.740e-78
Identity = 119/150 (79.33%), Postives = 134/150 (89.33%), Query Frame = 3
Query: 639 MSLSQEEVDACHEAFREADVNKRGHIDVWELRVVLQELGQNPTDKEFFEIVSSVDIEMKGIIDFDSFIKIVARQKRIRSAWSGNNEDLVDAFVACGGNPDETGSADASKIVKIVKTDFRLDVDIEGIIDALDVDRTGKLGFAQFKEMLSS 1088
MSLSQEE+DAC EAFRE DV +RG+I+VWELR+VLQELGQNPTDKEFFE+VS+VD EMKG+IDF SF+KIVA QK +RS WSG++ DLVDAFVACGGNPDETGSAD KIVKIVKTDF LDVDIE IID LDVD G+LGFAQFKEML++
Sbjct: 1 MSLSQEEIDACQEAFREVDVGRRGNINVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGLIDFTSFLKIVASQKSVRSIWSGDSGDLVDAFVACGGNPDETGSADVDKIVKIVKTDFGLDVDIEAIIDTLDVDGAGQLGFAQFKEMLTA 150
BLAST of mRNA_A-nodosum_M_contig1016.2.2 vs. uniprot
Match:
A0A5A8CYZ5_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CYZ5_CAFRO)
HSP 1 Score: 151 bits (382), Expect = 2.730e-41
Identity = 70/149 (46.98%), Postives = 104/149 (69.80%), Query Frame = 3
Query: 639 MSLSQEEVDACHEAFREADVNKRGHIDVWELRVVLQELGQNPTDKEFFEIVSSVDIEMKGIIDFDSFIKIVARQKRIRSAWSGNNEDLVDAFVACGGNPDETGSADASKIVKIVKTDFRLDVDIEGIIDALDVDRTGKLGFAQFKEMLS 1085
M L+QEEV C +AF DV++ G IDVWEL+ VL+ +GQ PT+ E F ++S VD + G IDF F++I+ +QK +A + + +D +DAFVACGGN D++G +VKI+K DF L +DIE +IDA+D D++G++ + +FK +LS
Sbjct: 1 MPLTQEEVKGCRDAFLAFDVDRSGTIDVWELKSVLEAMGQRPTEDELFSLISEVDSDFSGTIDFSEFLRIIEKQKEKATAHN-DEQDFIDAFVACGGNEDKSGVVKKETLVKIIKEDFGLTIDIEELIDAVDTDKSGEIEYDEFKSLLS 148
BLAST of mRNA_A-nodosum_M_contig1016.2.2 vs. uniprot
Match:
A0A485KGT0_9STRA (Aste57867_5639 protein n=8 Tax=Oomycota TaxID=4762 RepID=A0A485KGT0_9STRA)
HSP 1 Score: 150 bits (380), Expect = 4.770e-41
Identity = 70/149 (46.98%), Postives = 107/149 (71.81%), Query Frame = 3
Query: 639 MSLSQEEVDACHEAFREADVNKRGHIDVWELRVVLQELGQNPTDKEFFEIVSSVDIEMKGIIDFDSFIKIVARQKRIRSAWSGNNEDLVDAFVACGGNPDETGSADASKIVKIVKTDFRLDVDIEGIIDALDVDRTGKLGFAQFKEMLS 1085
M L+Q+E+DAC EAF D ++ G IDVWELR VL+ +GQ PT++E F+++S VD +M G IDF F++++ QK R+A + D++DAFVACGG PD+TG +VKI+K DF L ++IE +I+ LD++++G++ F +FK +L+
Sbjct: 1 MVLAQDEIDACREAFLAFDKDRSGTIDVWELRQVLEAMGQQPTEEELFQMISEVDEDMSGAIDFAEFLQVIDNQKD-RAALYNDESDMIDAFVACGGKPDKTGVVKRDTLVKIIKLDFGLTINIEEMINKLDINQSGEIEFDEFKAILT 148
BLAST of mRNA_A-nodosum_M_contig1016.2.2 vs. uniprot
Match:
A0A812QQV9_9DINO (Calmodulin n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812QQV9_9DINO)
HSP 1 Score: 150 bits (380), Expect = 4.770e-41
Identity = 71/149 (47.65%), Postives = 104/149 (69.80%), Query Frame = 3
Query: 639 MSLSQEEVDACHEAFREADVNKRGHIDVWELRVVLQELGQNPTDKEFFEIVSSVDIEMKGIIDFDSFIKIVARQKRIRSAWSGNNEDLVDAFVACGGNPDETGSADASKIVKIVKTDFRLDVDIEGIIDALDVDRTGKLGFAQFKEMLS 1085
M L+Q+E+D C +AF D + G I+VWEL+ VL+ +GQ+PT++E F+++S VD G IDF F+K++ +QK RS+ D VDAFVACGGN D++G +VKIVK DF L +DIE +ID +D DR+G++ +A+FK++LS
Sbjct: 1 MPLTQDEIDGCRDAFLAYDKDHSGSIEVWELKEVLEAMGQHPTEEELFQMISEVDENASGSIDFGEFLKVIEKQKE-RSSHFDEETDFVDAFVACGGNSDKSGHVRRETLVKIVKEDFGLTIDIEKLIDDIDEDRSGEIEYAEFKQLLS 148
BLAST of mRNA_A-nodosum_M_contig1016.2.2 vs. uniprot
Match:
A0A7S2GY36_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GY36_9STRA)
HSP 1 Score: 149 bits (375), Expect = 2.620e-40
Identity = 71/149 (47.65%), Postives = 100/149 (67.11%), Query Frame = 3
Query: 639 MSLSQEEVDACHEAFREADVNKRGHIDVWELRVVLQELGQNPTDKEFFEIVSSVDIEMKGIIDFDSFIKIVARQKRIRSAWSGNNEDLVDAFVACGGNPDETGSADASKIVKIVKTDFRLDVDIEGIIDALDVDRTGKLGFAQFKEMLS 1085
M LSQ+E+D C EAF D ++ G IDVWELR VL+ +GQ PT++E F+++S VD M G IDF F+ ++ QK ++ N D++DAFVACGG D+TG +VKI+KTDF L +DIE +I+ +D D +GK+ F +F +LS
Sbjct: 1 MVLSQDEIDGCREAFLAFDKDQSGTIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFAEFLLVIENQKSRAESFDDEN-DMIDAFVACGGKADKTGHVKRDTLVKIIKTDFGLTIDIEDLINKIDTDGSGKIEFDEFMTLLS 148
BLAST of mRNA_A-nodosum_M_contig1016.2.2 vs. uniprot
Match:
A0A6U3V7I8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3V7I8_9STRA)
HSP 1 Score: 149 bits (375), Expect = 2.710e-40
Identity = 73/150 (48.67%), Postives = 101/150 (67.33%), Query Frame = 3
Query: 639 MSLSQEEVDACHEAFREADVNKRGHIDVWELRVVLQELGQNPTDKEFFEIVSSVDIEMKGIIDFDSFIKIVARQKRIRSAWSGNNEDLVDAFVACGGNPDETGSADASKIVKIVKTDFRLDVDIEGIIDALDVDRTGKLGFAQFKEMLSS 1088
M LSQEE+D+C AF D ++ G IDVWELR VL+ +GQ PT+ E F+++S VD M G IDF F+K+V QKR + N D++DAFVACGG PD +G ++KI+K DF L +DIE +I+ +D D +G++ F +FK +LSS
Sbjct: 1 MVLSQEEIDSCRGAFLAFDKDRSGTIDVWELRQVLEAMGQAPTEDELFQMISEVDDNMSGSIDFGEFLKVVESQKRRAENFDDEN-DMIDAFVACGGMPDRSGHVKRETLIKIIKHDFGLMIDIEELINKIDTDGSGEIEFEEFKILLSS 149
BLAST of mRNA_A-nodosum_M_contig1016.2.2 vs. uniprot
Match:
D8LKX2_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX2_ECTSI)
HSP 1 Score: 149 bits (377), Expect = 3.110e-40
Identity = 70/150 (46.67%), Postives = 103/150 (68.67%), Query Frame = 3
Query: 636 GMSLSQEEVDACHEAFREADVNKRGHIDVWELRVVLQELGQNPTDKEFFEIVSSVDIEMKGIIDFDSFIKIVARQKRIRSAWSGNNEDLVDAFVACGGNPDETGSADASKIVKIVKTDFRLDVDIEGIIDALDVDRTGKLGFAQFKEMLS 1085
GM L+QEE+D C +AF D ++ G+IDVWELR VL+ +GQ PT++E F+++S VD M G IDF F+K++ QK R+ + D++DAFVACGG D+TG +VKI+K DF L ++IE +I+ +D D +G++ F +FK +LS
Sbjct: 28 GMVLTQEEIDGCRDAFLAFDKDRSGNIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFPEFLKVIENQKT-RAQNFDDETDMIDAFVACGGRMDKTGHVKRGALVKIIKVDFGLTINIEDLINKIDADGSGEIEFPEFKALLS 176
BLAST of mRNA_A-nodosum_M_contig1016.2.2 vs. uniprot
Match:
F0WBF6_9STRA (Dynein light chain putative n=15 Tax=Oomycota TaxID=4762 RepID=F0WBF6_9STRA)
HSP 1 Score: 149 bits (376), Expect = 4.250e-40
Identity = 71/149 (47.65%), Postives = 106/149 (71.14%), Query Frame = 3
Query: 639 MSLSQEEVDACHEAFREADVNKRGHIDVWELRVVLQELGQNPTDKEFFEIVSSVDIEMKGIIDFDSFIKIVARQKRIRSAWSGNNEDLVDAFVACGGNPDETGSADASKIVKIVKTDFRLDVDIEGIIDALDVDRTGKLGFAQFKEMLS 1085
M L+Q+E+DAC EAF D ++ G IDVWELR VLQ +GQ PT++E F+++S VD +M G IDF F++++ QK R+A ++ D++DAFVACGG+ D++G ++KI+K DF L ++IE +I+ LDVD GK+ F +FK +L+
Sbjct: 28 MVLAQDEIDACREAFLAFDKDRSGTIDVWELRQVLQAMGQQPTEEELFQMISEVDNDMSGAIDFAEFLQVIDNQKD-RAALYDDDSDMIDAFVACGGSSDKSGFVRKEGLIKIIKQDFGLTINIEEMINKLDVDGNGKIKFKEFKAILT 175
BLAST of mRNA_A-nodosum_M_contig1016.2.2 vs. uniprot
Match:
A0A835Z187_9STRA (EF hand-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z187_9STRA)
HSP 1 Score: 147 bits (372), Expect = 7.300e-40
Identity = 69/149 (46.31%), Postives = 104/149 (69.80%), Query Frame = 3
Query: 639 MSLSQEEVDACHEAFREADVNKRGHIDVWELRVVLQELGQNPTDKEFFEIVSSVDIEMKGIIDFDSFIKIVARQKRIRSAWSGNNEDLVDAFVACGGNPDETGSADASKIVKIVKTDFRLDVDIEGIIDALDVDRTGKLGFAQFKEMLS 1085
M L+QEE+D C +AF D ++ G+IDVWELR VL+ +GQ PT++E F+++S VD M G IDF F+K++ QK +R+ + D++DAFVACGG +++G +VKI+K DF L +DIE +I+ +DVD +G++ F +FK +LS
Sbjct: 1 MVLTQEEIDGCRDAFLAFDKDRSGNIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFSEFLKVIENQK-MRAESFDDETDMIDAFVACGGLANKSGHVKRDTLVKIIKQDFGLTIDIEDLINRIDVDGSGEIEFEEFKTLLS 148
BLAST of mRNA_A-nodosum_M_contig1016.2.2 vs. uniprot
Match:
A0A7S1CKF1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKF1_9STRA)
HSP 1 Score: 148 bits (374), Expect = 1.390e-39
Identity = 69/149 (46.31%), Postives = 102/149 (68.46%), Query Frame = 3
Query: 639 MSLSQEEVDACHEAFREADVNKRGHIDVWELRVVLQELGQNPTDKEFFEIVSSVDIEMKGIIDFDSFIKIVARQKRIRSAWSGNNEDLVDAFVACGGNPDETGSADASKIVKIVKTDFRLDVDIEGIIDALDVDRTGKLGFAQFKEMLS 1085
M L+QEE+D C +AF D ++ G IDVWELR VL+ +GQ PT++E F+++S VD M G IDF F+K++ +QK R+A + D++DAFVACGG D+ G +VKI+K DF L +DIE +I+ +D D +G++ + +FK +LS
Sbjct: 45 MPLTQEEIDGCRDAFLAFDKDRSGTIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSIDFGEFLKVIEKQKE-RAAKFDDESDMIDAFVACGGKADKEGHVHRDTLVKIIKHDFGLTIDIEQLINEIDADGSGEIEYEEFKSLLS 192
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1016.2.2 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 6.74e-78 / Id = 79.33 Expect = 2.73e-41 / Id = 46.98 Expect = 4.77e-41 / Id = 46.98 Expect = 4.77e-41 / Id = 47.65 Expect = 2.62e-40 / Id = 47.65 Expect = 2.71e-40 / Id = 48.67 Expect = 3.11e-40 / Id = 46.67 Expect = 4.25e-40 / Id = 47.65 Expect = 7.30e-40 / Id = 46.31 Expect = 1.39e-39 / Id = 46.31 Sequence D7G6G8_ECTSI A0A5A8CYZ5_CAFRO A0A485KGT0_9STRA A0A812QQV9_9DINO A0A7S2GY36_9STRA A0A6U3V7I8_9STRA D8LKX2_ECTSI F0WBF6_9STRA A0A835Z187_9STRA A0A7S1CKF1_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Seed ortholog 2880.D7G6G8 PFAMs EF-hand_1,EF-hand_5,EF-hand_7,EF-hand_8 Model size 1132 Max annot lvl 2759|Eukaryota KEGG ko ko:K02183 KEGG Pathway ko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04070,ko04114,ko04218,ko04261,ko04270,ko04371,ko04626,ko04713,ko04720,ko04722,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05152,ko05167,ko05200,ko05214,ko05418,map04014,map04015,map04016,map04020,map04022,map04024,map04070,map04114,map04218,map04261,map04270,map04371,map04626,map04713,map04720,map04722,map04728,map04740,map04744,map04745,map04750,map04910,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04970,map04971,map05010,map05031,map05034,map05133,map05152,map05167,map05200,map05214,map05418 Hectar predicted targeting category other localisation GOs GO:0005575,GO:0005623,GO:0005929,GO:0031514,GO:0042995,GO:0043226,GO:0044464,GO:0120025 Exons 4 Evalue 1.95e-81 EggNOG OGs COG5126@1|root,KOG0027@2759|Eukaryota Ec32 ortholog description Dynein 18 kDa light chain, flagellar outer arm Ec32 ortholog Ec-05_006150.1 Description Calcium-binding protein Cds size 453 COG category DTZ BRITE ko00000,ko00001,ko01009,ko03036,ko04131,ko04147
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866375.3135672-UTR-A-nodosum_M_contig1016:2077..2118 1680866375.3135672-UTR-A-nodosum_M_contig1016:2077..2118 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig1016 2078..2118 - 1680866375.3751378-UTR-A-nodosum_M_contig1016:10263..10901 1680866375.3751378-UTR-A-nodosum_M_contig1016:10263..10901 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig1016 10264..10901 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866375.3286707-CDS-A-nodosum_M_contig1016:2118..2306 1680866375.3286707-CDS-A-nodosum_M_contig1016:2118..2306 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1016 2119..2306 - 1680866375.338976-CDS-A-nodosum_M_contig1016:2727..2805 1680866375.338976-CDS-A-nodosum_M_contig1016:2727..2805 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1016 2728..2805 - 1680866375.3519125-CDS-A-nodosum_M_contig1016:3345..3423 1680866375.3519125-CDS-A-nodosum_M_contig1016:3345..3423 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1016 3346..3423 - 1680866375.363299-CDS-A-nodosum_M_contig1016:10154..10263 1680866375.363299-CDS-A-nodosum_M_contig1016:10154..10263 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1016 10155..10263 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1016.2.2
>prot_A-nodosum_M_contig1016.2.2 ID=prot_A-nodosum_M_contig1016.2.2|Name=mRNA_A-nodosum_M_contig1016.2.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=151bp
MSLSQEEVDACHEAFREADVNKRGHIDVWELRVVLQELGQNPTDKEFFEI back to top mRNA from alignment at A-nodosum_M_contig1016:2078..10901-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1016.2.2 ID=mRNA_A-nodosum_M_contig1016.2.2|Name=mRNA_A-nodosum_M_contig1016.2.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8824bp|location=Sequence derived from alignment at A-nodosum_M_contig1016:2078..10901- (Ascophyllum nodosum dioecious)CTCCAGTAGACTGGGAATCAACCGCGGCATGGGTGTCGATCCTGCTTGTT
GTGGTCAGCTGAACACGGGAAAAAAAAAATCCTTGTCCCCGTTCGCGCCT
CAGAATTTGGTCTCGCGAGACGGGTTCGGCCGTCCCGTTCAGCGCGAGCC
CGTTCATTCTGCACACTCAGGTTGAATCTATTAGTAATTGTTAGTGTGGA
TACCCGGAAGGTTTTTAACATGCAGACTTTTTCTACAGACACAAAAAAAA
TACAGGTTGCGGTCTAATCGATTCGTTGGGATACATAGGAATTTTGCTAC
TTTTTTCTTTAAAACGTAGTTCCGCCGCGTGCGTCATGTCGTGTCACGCG
AGGTACGAATGTAAGTCATTCACGGCTGTATCGATCTTCCACCGCGAAGG
AGAATACTACCACGGAACGTGACGCCTAGAAAGTGCGAAGTTACGGGCGC
ACGGATGGGCGCTAAAACAAACTTCGCCGAAGAGAGCCTCCGGAAGAGCT
TTCGCGACGACATCCTTCCGATTTGAACTCGCTTTCTTCAACTCGGAGGG
ACAGGGATACAGTATTATTCTGAGACCCTTCGCGTGAGATCTGGAGCTAC
TCAAGAGTTACTGAGGGGCCACTTATACACGGCCGGGG ATGTCTCTGTCG
CAAGAAGAAGTTGACGCGTGCCACGAGGCGTTCCGAGAGGCAGATGTCAA
CAAGAGAGGGCACATTGACGTCTGGGAGCTGCGCGTTGTCCTTCAAG GTG
AGCATACACCACGATTGCAAGTGAAATCGACCGCAGTCCTTGTATTTCAG
CGAAACGTAATTTAAAAGGTCTGCTCCGGTAGACTCGGAGGGGTCAACCC
GTTGATGATTGACGCTGTCGATGGAAACCGTACGTAGTGGAAAGCGGGGA
AAAGGAGAGGAGCCCGTGAGTAAGCAACTGTCTCGCGAAAACAAATTCAA
TTAGGGACAAAGGGAAACTAACTCGCGCCTGTTCAGCTGAAATTGGCAAC
CATGTCCGGTATCTGGTATTATAATCACAAAAGTATGTGGTATAGAAGGG
CTGGATTTGTGCAATTCAATAAATAAATACACAAACACACACACAAACGG
CATAGAATGACTTGGATGACAGGGTCGGATTGCGCGCGGTTATATGAAAT
ATAATAAACACGAACACACACACACACACACACAAACGTACAAGTAGAGA
GAGTGTGTCCCCTCTATCGCGCCTGATCAGAGGTTTTCGTAACAAGTATC
ATTGGTCCCCCATTGGGAGGATCAACGAGAGTGGCATAAAATGACTAGGA
TGACAGGGCCGGACTGCGCGGTTATGTGCAATTTAATAAATACACACACA
CGCACATTAAATACACACACACACACGCATTCACGCACAAAAACTCATGG
TTATTGGTGTTTCACCCCGGGCCTTATGGCTTGTGGAGATTTCTTTGCGC
AGAAAGAAAATATGTGCGGGGAGGGTGCAGTCGGGACACGCACCGATTGG
GTGTTGAAAGGGGAGGGGGGCGTAATGACTATATCACTCCTGCAGTACGT
TGCATGATTTGATAGTGGTGGCGAGATTGTCGGGTTTGGATGGGGAGGTT
ATAAGGAGAGTCAGCCATGGTGCTCCCTGTTTGTCGGATTCCCGTCTCTG
TCTGTTGCGCCAAGCGGCGAGCAACTAGCTTTACCCATGTGTTGGAGGGG
GACAGTGCTATTCACCATTTCTAGTGTTTTCGTCCCCATATTTTTCTCCG
GGCAGAGCGTTGTAGTTAATGTTGAAGGAGTGGGGTTCCGGCCGAGAGCC
GCCGTAGCGGGCGGAGGAATGTAGCTGGATGCACGCGCATTTCCAGCCAA
GAGCATGTTCGCGAAAAGTAACCCCCGGATAGTTTACATGCAGCAGCATA
GAATGAGTAGATTGTAGGGTCGAATTGTGCGGTTATGAGAAATTTAATAA
ATAAACACACACACACACACCTGGGTATTCGACTAGCTTTTTTCTTGACT
TTCTCCCTGCCCTCGGGATTCGCGCACAGCGCAAGACTTATGGTTGGTGT
TTTACCCTGTGTCCTATGGTTTTCGGGGGAGTTTTCGTGTGACTGTATGT
TTTGGGGCGAGAGGGGAGGAGGACTTACTGGGCAACCGGTGAGCCCACTG
GTGGACACAGCAACCATGGCGACAGTAATGAACGCAAATCGCGTGGACTG
GGGGAGGTTTGAACACGAGCGCAGACCCTATTCGGCTACTATATATCCGA
GTATTTTCTTGCAGAGAAAGGAAACATGTGCGGATGTAGTCGAGACACGA
TGACGTCATCACCGATTTGGTGTCAAAGGGAGGAGGGCGCAATGACGATA
TCACTCCTGCAGTACGTTGCACAGTTTGGCGGGGGTGGCTAGAATGTTGG
GTCTGGATGGGGAGGTGACAAGAAGAGTCGGTCGTTGGGCTCCTTGTTTG
TCGGATTCCCCTCTCTATTTATTGCGCCAAGCGGCGAGCGAGTAGCTTTA
CCCATGTGTTGGAGGGGGACAAGCCTGTACACCATTTTCCGCCGTTTTAT
CCCCATATTTTTCACCGGGTAGAGCGTCATAGTTGATATCGAAAGAGTGG
CATTCCGGCCGAGAGCCGTCGTAGTGCGGGGATGAGTTCTGGCTGGATGC
ACGCGCATTTACAGCCAAAAGTAGTATGTTCACGAAAGGTAACCCCCGGG
TGGGTCACATACAGTATTTTAGAATGAGTAGATTACAGGGCCGGATTGCG
CGGTTATGTGAGATTTAATAAATACACACACACACATACACACGGGAATA
TACACCTGAAGCTCGACGAATACGAGCAAGTAAGCTAGCACATGAGAGAG
GAGGCATCACCGAGCCCGCGGGCGCCCTAATCTTTCCCCCAGCAGTGCCT
CGAGACCACAGGACACTGGTAACGCTACGCAGCAAGCACACCGCAAAGAA
CCCTACAGCAATTACCACTGGTAAGGCGCGGGTGGAACAACGTGCAGAAG
TTACAGCAAATGGTGAGCAGGAGCAGCGGCCGAACGTGACAACTGGGCTA
TTGAACGCACAAGGCCAGATCCCGGAGATGGAGAACCTCTTTGAAGAGGC
CACGGTGAACGCTGTCATCAAGAAACCCAACCCACAGAGCGCGGCAGGTC
TGTCTGGACTACGCTACAGCCATCTGCAGGCTGCGCTTTCCGATGAACTG
GTCGAGGATCTCGCAGCGTTTGCGACACTTGTCTTTACCAGCCGTGTTTT
GCCCCACGGGTTTTGGACACTGAAGGCGAGCGCTAATCTTTGCGCGTTGG
GGCAAAAGGCGAGACCAGTGGCGTGCGGTGATGTATTGCGGAGAGTTATT
GGCGCCGTTTTCTGCAGCCGATACGGCAGGAAGCTGGCAGATTACTTCCA
GTCCTGGGGCCCGTGCGGCGTAGCAATTTCAGGTGGAGTAGAGATTATGG
GGCTTACAGCAACACTGGGTTTCGAAGAGGGTTACACCACTCTCTCGTAC
GACGGAGCAAATGTTTTCAACAGTATATGCCACCTCAGGTTCCTGCCAGC
GCTAGCGGAAATCGTTCCCTTAGTGGTTCCCTACGCATCAAACCTGTACA
TACGAGAACCCCCAAAACTCCCTGTTTACATTAGATGGAGGAGGTTTGGA
AGTAGTTGAGTCAGCGCGGGAAGTACAGTAAGGATGCTATCTAGGCTCTT
TTTGCTACATCGCAGGCTCACTGAAGATACTGAAAACGTTCAAGGGCAAT
CCACCGGTACCAGGAGTGAGAGCGGTTTCGTTCATCGATGACATTGCAGT
CATTCTACCACCGGAACTCTCCCTCGGCATGGCAGCATAGAGAAACTTAC
GGACTGGCTGCAAGAACGCCTAGGGGTAGAAGGCATATCGTTGAACCGCA
GGAAATCGCAGGCCTTGCTATTATATGGAGTGGGGCCAAAACATCTGGCG
GAAGAGCAGCGTACGGCGAGGGATGAAACAGGGCTCACGGTGGCCCGACA
GGGGATGAGGGTAGTGGGAGTACCCGTTGGAACAGTACACTTCAAGCGGA
ATTTCTTACAGGAGGTAGTTAATGGAGAGCCAACTAAACCTGTAAGGGTG
CTTGTCCCGATGGAGGATGGCCAAGCGAGCTTTGAGAGCTTGCATCTATC
TGCCTCTTCCCGCCTGCCCCACCTACTTCGCACAGTCCTGCCCTCCATCA
CGTACCAAGCTGCTGCAGATTACGAAGGTTGAGTGGAGTGGGCGTTGATG
TCTATAATAATAGCTTGTGACGAAGCTTCCGCGGCAGGGTTACCAACCCC
AGAGGAAGTAGTCCACGATCCCACCGTGTGCCAAACTCAGACTTACCTGA
GACATGAGGTCCTACGGCAGACCCACCTGCGCATCCGAGAAGGCGGCCTT
GGACTTACCAGCAGCAACTCCATCAAAAGTGCTGCCTACCTTGGTTGCCA
CACCTTGGTTCTGCTCGCATCGTCGCCACCTCCGTCCGGGGGAACCTTCC
ATCCCTTCTTGAACGGCTGCCTGAGCGACCCATGGCATCAGCGCTCCTTC
AAGAGCTGAAGACCGTCGCCACCGAAGTCAAGAAAAGCTAAATAAAGGAT
GCAGTGGGCAGTTTGTGGGCAGCCCTGGCGGTGGAAGAGGACCCTTAAGG
GAGAGGGATAGGGACTCCACTGGTCGAGGCGGGAGAAAGAGAATGAGAGG
GGCGGGGGGAAGGAGGCGGGAGGGGGGGGGGGGGAGGGGGGGAGAGGGGA
GGGGCGGGAGGACCGGGGTGTTGAACAGCGAGAACGATGGGGGGATCCGT
TGTCAACTCAGTCTGATAGGGAATATGGGCTAAGTCAGACCAACGAGGGG
GTGGAGGAATGTGCGTTGGAGTTGTGCCCTTTGTCCAATCAAACATCTCG
CGCGCCCTCTACGCGCATCGAGAGAAGAAGCTCCTGTAGGATCTCCAAAA
CTTGAAAAACACGACACTGAAGAGAGCTATGGTAAGGTTCAGGGGGGAGC
GGGAGAAAGGCGCCATGGCATTTACAGAACGCCTGGAGGTCTAGCAAAAT
ACACGATGGAAGCCCCCCTGTGGAGGGAGATCTAAGGTAGGAGCCTGGGA
TCGCATGACGCGGTGGAACGTGTTGGTGGGATGTGCCATGACAACGGTTG
CCGGCAAAAAACCACCCGCCTCCACGCCATATCCTGCACAAAGACGGAAT
GGAGCTCTCTTACCCTTGATCTAGTGCTCCACCAGGAACTGGCTACATTC
CTTCGCGAGAGCAAAGTACGGTTGGTCGTTGAAGACACATGGCCCTTCCG
AGAGAGAGCTAGCAGACAAAACGGCAGATTGAACCCTCTACGAATGGACA
TAACAACGGAGGTGAGGGCACCCTTAGACAACTACCCTCGACGTAAGACT
AAGTAAGGTGCTTCTACTCGGCAGTACAATTGTTAACCCTTGCGCCAGCT
CCAATCTAGACAATACAGCATGTTATGCAGGAAAACACCTCGCCGACGCA
GTCAAGAGGAAGAAAAACAATTACCGGGGCTCGTTCGCCACTACCTACTC
TCTCCTTCCTCTGGCTATGTCGGCGTGTGGTGAAATTGGCTCAGACATGC
ATACCTTTATTAAAGAGCTCGCCATCAGACGGTTAAAGCACAGGTCGGAG
ATACACTCCAACGAGTCCCAGCATCTGGCGGAGGGGGCGGAAGTAGCACG
TATTCGGCGGTGGTTCTCTTTTGCTTTACAGCAGAGGGTAGCGCTTGCGG
GCACCCGCCAGTTCCGTTCGCAAGGCCCGGTGTCGGTATACGTGCATCGT
ACCGAGGGGGTAACCGGTTGGGGTCGGGGGTAACCGGTTGGGGTCGGGGG
TAACCGGTTGGGGTCGGGGGTAACCGGTTGGGGTCGGGGGTAACCGGTTG
GGGTCGGGGGTAACCGGTTGGGGTCGGGGGCGGGAACTAGGACGTGAGCG
GTGTTGAGGACAGGACGGAGCGGGAACGAGAACAGGGGTGGTGGCGAACG
AGCCAACGCAGGATGGAAACGGGTACGAGAGCGGGAACGGGGCGGGAACG
GGGATGGGAACGGGGGTGGGGACCGGTGGATAAACACTAGATAAGAACGG
GGACGGAAGCGAGGAAATAAACGAGAGCAGCAGCGGAGATGGGAACGGGG
ACGAGGATGGGAACGGGGACGAGGATGGGAACGGGGACGGGAACGAGGAC
GGGATCGGGGAGAGTGGAGGAAAGAGGGATAAGCGCAAGAAACCACACAA
GAGTTGTAGATGCGATGTGGGGAACAGGGGAGACTTGGGTGGAAAGAGAA
GAAAACGTAGGCAAGAAAGGGTTCGTTCAGTAGCTTCCAGCCCAAATAAT
CTAGAGAATAGTATAGCAAGGAAGCAGGGAGAGAAGCACAATGTACTTAG
GGCTCAAGTAGGAACTGTACAAGTGGAGAGAGAGTGTCCCCTTTGCTGCG
TCTGATCAGAGATTTTGGTAATAAGAATCACTGACCCCCCTTGAGAGAAT
CAATGCGATTGGCATAAAATGGCTAGGATGACAGGGACGGACTGCGCGAT
TATGTGCAATTTAATAAACACACACACACACACACACACGGACGAGAGCT
TTCCAGCACGATTAAGTGATAATGAGATTGGTCAGCGTCAGAATTAATAT
GAATGCCAAAACTGTAGATCCCAGATAGCAAGTAGGTCATGTCAAATCTT
TCGTACTCTACAGTATGTGTGTCGTAAGGCGAGAGCATATCGCCGTCCCG
CACACAAAAACTCGTGTCTCAGGCCGCGATGGTACCCAAACGAGTTTACT
AAGGTGAATAACACTATTAATACTACTAGAACATGGTTTTGGTGTACCCA
TGAGGCGATAAGTGTAAGTGTACAGTATAACGGTGGTTTCTCACCGATAT
TATACTGTATTATAGTATAGTGTTGACCTTATGCGACTAACATTGGGAGG
CCTAACTAAGATCCCATGTGGAGGTTTGCTCGAATCAGCCAATGTTGCCA
ACTAACCGTTTCGGTGCATTCCCCCTGGACACTGTGGATGCTCGGAGATG
CGTTCATTTTTTTCTATAAAAACCGAAGTCAACCTTCGAAATCAATAAAC
CACCGTTTGGTCAAATTATTTGCATGATCACGATGAACCGCTGCCGCGAA
CCCTATATAACCCGTGCTTAAGATATGCTCGTAATTATGTAGCTCTAGGA
GCTTGTAAACGCTTGGTAGACATGGATACAATATCCAGCTAATCTTTGTA
CCTAGCTATGCATGGCTTGGTTAAGGGTATGTCAGCCGCAAGATACGAAC
TTGGCGGCTGAATGAAGTGGGCGTATAACCACGAAGGGTTCTGCCTCTCG
TGTAGAGGATGGCGTGAATCAATGATGCATATCTATCGACGAAGCTGATC
GCGTTACCTCACGCGGTCGACTGCCGAATGAACGTGAGAACTACCTGCAA
ACACGCCTTGCAATGGGTCCGCCGGCAGAGCTGGGGCAGAACCCGACAGA
CAAGGAATTCTTCGAGATCGTGAGCAGCGTCGACATAGAGATGAAGGGGA
TCATAG GTGAGCGAAGAACATAATAACGAGAAAAATATAGAAGTATACAG
CTAATACTCGTACGTACAAAAATAGTTGGGACATGCGCAGAACTTTCTCG
CGAGTCTGGTTCGTCAACCTGCGCCACGCCTCGATGCCAAACGAGGCAAA
GCGAGGGTTGAAACCCTGCAGTATACTTGTTCATCGGCATGTCGCCTGTG
TAGGCGTGGCTGTAGAGGTGATATATTATCAGTACACACCGTACAAGTAT
TCTCCCCCGGGCCACCTCCTGTGTCGGTTGTCGGGGGACTCGAAAGCCGG
GGTCGCAATCCCGCTGACTGGGCGGGTGGCTCAGTGGATAGTTGTAAGGT
TGGGATCAGTCTGATCTACGAGCGCGCGTAATGTCAAGGCGAGGCATATC
TACCAAGAAAATAATAAGCAATCCAGCGGCGCAGTCTTGGTTTCTTTTTC
AGGCATCCCACGGGCCTTCGGCCCTAACAAGCTGGTTGAACCATATACGA
TTACGATGTATTTCCTCAACTCGATGATTCTGTATGATTTCTGCAGACTT
TGACTCCTTCATAAAGATCGTAGCCCGCCAAAAGAGAATCCGGAGTGCCT
GGAGCGGAAACAATGAAGACTTAG GTAAGGGTCAATGCAGCTTGCCTACG
GCGAAAGTATAGCAGTACTGTACGGATTGAGTCATGATTCATATAGGTTC
CAAAACAGATTTCGCGAGATGCCTTGGGTTCAATTAGATTATGGTGTTAG
CGACATCGCTGGACCGGGTTTACAGCAGCAGCGATCTATAATACTGTAAA
TGTATTGATGCAAGTCTCTATTCTCGACAAGTTAATGGTTAAAAAATCGC
ATCCTTGCACGAACAACCAGCATTCAGTTACTGCTGTACTAAATAGAACG
GCCGGTATGCTTTCACGGCAGAGAGCAACATCCATCCGCAAGGGTTGACT
CTACCCACAATGATGGGTTGTACAAATGTTGCATACAGTACACCTCCTGT
ACTGCCCATACACGTCCTCGACCCCCCTTTCCCGAACTTGAGCAGTCGAC
GCCTTTGTAGCCTGCGGTGGAAACCCGGACGAGACGGGTTCGGCGGACGC
GAGCAAGATTGTGAAGATCGTGAAGACAGATTTTAGGCTCGATGTGGATA
TAGAGGGGATCATCGATGCGCTGGACGTAGATAGGACCGGCAAGCTAGGG
TTCGCTCAGTTCAAGGAGATGCTATCTAGTTGA AGTCAACCAATATGCCA
TGTGTTTGTCCGATGGGACCGGGG back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1016:2078..10901-
>mRNA_A-nodosum_M_contig1016.2.2 ID=mRNA_A-nodosum_M_contig1016.2.2|Name=mRNA_A-nodosum_M_contig1016.2.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=453bp|location=Sequence derived from alignment at A-nodosum_M_contig1016:2078..10901- (Ascophyllum nodosum dioecious) back to top