Homology
BLAST of mRNA_A-nodosum_M_contig1016.12.1 vs. uniprot
Match:
A0A6H5L6N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N1_9PHAE)
HSP 1 Score: 150 bits (380), Expect = 9.310e-35
Identity = 79/162 (48.77%), Postives = 104/162 (64.20%), Query Frame = 1
Query: 1549 LEEGDSLGLEQALRNGPTEMKLMSNGDLVLSFDGVAVWLAQGSKKRRGVLGWIWRKIRRRTTLRQCSKCRFTVTSSGQLEIRERRKLLWSGGLPKRNAKQNKG--------IPEATSRGSASAHAESCLGEVRSTYRLEVTDGGNAVLKLGDSEVVWKALSR 2010
LE+ S+GLE AL NG TE+++M NGDLVL+ +G VW A+GSKKRR ++GWIWRKIRR+ +R C+ CR TV G++E+RE KLLWSGG ++ A+Q K +P A R A +RL +TD GNA+L+ SEVVWKAL+R
Sbjct: 365 LEQRRSIGLEDALTNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRKIRRQQAVRPCTACRLTVAPEGRVELREEGKLLWSGGQRQKKARQQKRQTTQQRKRVPRANDREGADGSG---------AFRLVITDDGNAILEREGSEVVWKALNR 517
BLAST of mRNA_A-nodosum_M_contig1016.12.1 vs. uniprot
Match:
D7G6H1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H1_ECTSI)
HSP 1 Score: 119 bits (298), Expect = 2.170e-24
Identity = 178/619 (28.76%), Postives = 233/619 (37.64%), Query Frame = 1
Query: 214 TSAVCAWVVSTAVELSDLHALRAVGYLALSVEALIVTWFWPRLFP-ARRVERSSQRQHRHSHRRRRD-----------DATAQHAISPDSVRSRRGKSVERWGEQDDVSELWSDGGRNNELPSPVHSDGIPALASSRGGRGANKRRITRYNSEANPSTWENLLATRPTAIVGQDSIPAKLPGAKKDGSVTRQTRARVGWVRQTRVSWVRRIFLVLFTLSSTYLATCLFFSGTWNLIPVLGKPPNQGTVFVGVFPGSCGTAECCVVAGTRESGEIGGAKRGEREGVFCREWPKVDDEVRREEETRPRRTVEEARKEDEKERSKHKWEFWGREERGDMPKNGRQDSASDEAAAEDGADVDAAETERERVRLMNEKGREAAAATKVEEKTKTAGTTATPTAEEDVYRRREIAEAERLRKEEFVLSVEHVVARQQGLWERLWGGRKPGKNKGIAPETCSHALEEGDSLGLEQALRNGPTEMKLMSNGDLVLSFDGVAVWLAQGSKKRRGVLGWIWRKIRRRTTLRQCSKCRFTVTSSGQLEIRERRKLLWSGGLPKRNAKQ--------NKGIPEATSRGSASAHAESCLGEVRSTYRLEVTDGGNAVLKLGDSEVVWKALSR 2010
T+ AW T SDLH LRA GYL LSVEAL VT++WPRL+P A R S +HR HRR R AT I+ + GK+ RW D S W G L S +L S GGR +RR R S S L P ++ P K DG + RV ++R+ + R + +VL TLS++YL T W L+ + + V V + ++ TR+ V ++ +++ R E E RR E K R+ A+ EA EK E A A +A RLR+ K A LE+ S+GLE AL NG TE+++M NGDLVL+ +G VW A+GSKKRR ++GWIWRKIRR+ Q E+RE KLLWSGG ++ K +P A R A +RL VTD GNA+L+ SEVVWKAL R
Sbjct: 3 TAGCMAWARVT----SDLHPLRAAGYLILSVEALTVTFWWPRLYPPAGRKRSESSARHRRQHRRSRHLSRSGSADLFGGATPSPTINGQRSNTNGGKASSRW--SGDSSGWWESEGGLEGLSEAGRSSAPSSLVSI-GGR---RRRAARLQS--GQSGGGGFLGEEPL-----ETFPEKRSAV--DGDM------RVPLPPKSRMRYARPVLIVLLTLSASYLTT-------WLLLSI-----SSARVSTAVDEDA--------MSSTRDI-------------VAMKKGAEMERRTREEREEGARRMELEE-------------------------KALREAVAAKEAXXXXXXXXXXXXXXXXXXXDAEEKRLEEARAXXXXXXXXXXXXXXXXXXXXXXXX---XXQAARLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKMAA------TLEQTRSIGLEDALSNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRKIRRQ-----------------QAELREEGKLLWSGGQRQKXXXXXXXXXXXXRKRVPSANDREGADGS---------DMFRLIVTDDGNAILEREGSEVVWKALDR 503
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1016.12.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 9.31e-35 / Id = 48.77 Expect = 2.17e-24 / Id = 28.76 Sequence A0A6H5L6N1_9PHAE D7G6H1_ECTSI
Match Name E-value Identity Description
A0A6H5L6N1_9PHAE 9.310e-35 48.77 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more] D7G6H1_ECTSI 2.170e-24 28.76 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Model size 3166 Hectar predicted targeting category other localisation Exons 7 Ec32 ortholog description Bulb-type lectin domain Ec32 ortholog Ec-05_006180.1 Cds size 1833
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866375.8437133-UTR-A-nodosum_M_contig1016:237167..238320 1680866375.8437133-UTR-A-nodosum_M_contig1016:237167..238320 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig1016 237168..238320 - 1680866375.9511356-UTR-A-nodosum_M_contig1016:255525..255705 1680866375.9511356-UTR-A-nodosum_M_contig1016:255525..255705 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig1016 255526..255705 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866375.861373-CDS-A-nodosum_M_contig1016:238320..238548 1680866375.861373-CDS-A-nodosum_M_contig1016:238320..238548 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1016 238321..238548 - 1680866375.8788075-CDS-A-nodosum_M_contig1016:238854..238983 1680866375.8788075-CDS-A-nodosum_M_contig1016:238854..238983 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1016 238855..238983 - 1680866375.8966715-CDS-A-nodosum_M_contig1016:239369..239693 1680866375.8966715-CDS-A-nodosum_M_contig1016:239369..239693 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1016 239370..239693 - 1680866375.9057517-CDS-A-nodosum_M_contig1016:240096..240681 1680866375.9057517-CDS-A-nodosum_M_contig1016:240096..240681 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1016 240097..240681 - 1680866375.918435-CDS-A-nodosum_M_contig1016:241105..241244 1680866375.918435-CDS-A-nodosum_M_contig1016:241105..241244 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1016 241106..241244 - 1680866375.9307466-CDS-A-nodosum_M_contig1016:241777..242125 1680866375.9307466-CDS-A-nodosum_M_contig1016:241777..242125 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1016 241778..242125 - 1680866375.9394684-CDS-A-nodosum_M_contig1016:255445..255525 1680866375.9394684-CDS-A-nodosum_M_contig1016:255445..255525 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1016 255446..255525 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1016.12.1
>prot_A-nodosum_M_contig1016.12.1 ID=prot_A-nodosum_M_contig1016.12.1|Name=mRNA_A-nodosum_M_contig1016.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=611bp
MECFGLMDDPVTSAVCAWVVSTAVELSDLHALRAVGYLALSVEALIVTWF back to top mRNA from alignment at A-nodosum_M_contig1016:237168..255705-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1016.12.1 ID=mRNA_A-nodosum_M_contig1016.12.1|Name=mRNA_A-nodosum_M_contig1016.12.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=18538bp|location=Sequence derived from alignment at A-nodosum_M_contig1016:237168..255705- (Ascophyllum nodosum dioecious)GTTCTTACCTCGCGCTAGGTAGAGTACGAGAATTGAGAACCGCGAAAAAG
CTGGCGTACCACATATGGTCACACCAAAGCCAGAGCATTTCAAGGAAGTT
ACGGGGTACTTCTGGCTCTCTCACTCCAATCGCTCTCCTCGGAGAGCCGG
AAGAGCCTCAAGCGTTGTTGCCTTCATGCC ATGGAATGTTTCGGACTCAT
GGACGACCCGGTAACGTCCGCGGTGTGTGCTTGGGTCGTTTCTACAGCAG
TTGAGCTCAG GTGAGAGGCCACTCCAGTTCAGTACAAAACGGTTGAATAT
TGCACCTACAACGCAATACGGTGGGCATCGTGAAGCGGACGTCACTGTAA
GAAATGCGAAGCGGTACAAGCACGTCTGGTTGCTGTCCGTGCGAGAACCT
GCCACGACTGCGATTGATACTACTTTATGTAAAGTAAAAAAAAAATGCGG
CAGGTAATTCGGGCCGTACGCCGTGAGATTACTTGTACTGTACCTGGTAT
AGCTTTAGAGGAGCAGCAGTTGCTCACGGCGAAGTCGTTCGTCCTACGAG
TGAGTACCTTTATATACACTATACACAGAGTGAGAGAAAACTATTTAGGA
TTCATATGTCCAGGAGCCGTTGTGCTGCGTACGATCACAACTTTTAAGCA
TCCGCCGAGTCAGGGGAGGAAGGTTGCCAAAACGTTTGGGTAGGGCAAAC
CACTTGTACACAACAGGTAGCTCTATTATAGGTCGAGAGCCTCGTCTACA
TGAGTTGCAAGCGGAAACAAAAATGCTTACAGACTCTTTTGAACACTGCT
GTGTGCACTTGTCCGGTGACCTGTAGTGCGCTCTTATTGAACGAGGCTCT
GCTGAGTGGCTGTTTGTTCTACAGCACGATAAATGCTTTATTCGTGCGAT
CAACACATGTACAGCACACACAGCAGTACTTATGTACGATACGCCGACAG
AACATCAGACGTACTGCATCTGCATTGTACTAGTACATAGGGGTGCCTCG
AACACTGTACCCGGTACGTCGTGTCACGCAGAATGTACGTACGAGCACGA
GCTCTGTTGTTGTTGGTCAGAAAGAAACTGAACTTGTTGTTTCTCACATT
CAGCGTATTGGTTGCCAACCCCGCAAAAACTACTTTACACGGTGGCCAAT
CCCGCTCGTGGTGTCTGCAGAAGAAGAAAAAGTGGAAGTCCTCGTAGCGG
TGCCAGCCGAGGAATACGGAGAGCTGCACAACAGTGGACAATAAATCGTC
TAAAAATGTCAATGCTTATATTTTGTCAAAGGGATTCTCGTATGTATGAT
CATCACATATAGCAGCGTATGGATCAACCGGGTAAGGTTGCCAATCCTAC
TCGTGGTCATCTGAACAGTGAAAATGAATATTTCCCTGTCCCCGTACGCG
CCTGAGAATTTGGTCTCGCGAGACGGATTCAGCTTTTCCGTCCCGCGTCA
GCCTGCTCATCTCCATATTCAGGCTGAATCTGGTGATTACTCGCGGGATT
CCTCCCGATTTCCGCGGCGGCGTCCATTTATCTATTTAAACCGCCATGCG
TCATCCGATCAGTCCCGAGTTTATCGGGTCACGCAGTTGCATACCGATGG
GGTTCCCTGCCGAGAGTCCGCCGGCACGCAGGGCCAATAGTCCTCAAGGT
AGTTCCAGTAACGGGTGCTGCCATCTTGCAGGTCACCATGGACCAATTAA
TGTGCGCCTCTCTTTTCCCACCCCCACTATTGGTATGAAGTGGTTATAGC
ATGTTGATAGAAGTGAAGTGAAGTATGACGGGCGGATAGAAGCCACGGGA
ACAACAAGCGCAAAGCTGCCCTGAGCCGAGAATGACCTCTCGACATATCC
TTCTCGATATGCGGGCTCGCGGACATGGGCCGAAGTCTCTACCGCTTCTT
GCGGCACTCGGTAGAGAAATGGATCAGAACATTGGAACATTCGCTGTGGT
GCATCGTTTTGTTATATACTGTAATCTGATCCCAAAGGGGAGAGCACATG
GCGCCAGTTTATGTAACATTGAAGAACGAGAACGCCCTTTTTTTGTGTCC
TCAAGACAAGCAGGTTGCTTTCGACCATCCCCTCTCCCCCCCCCTTGATC
GGGTGGATGGTTCCATGGTTCATCGTGTACTGCTATCATATGCTGCCTCT
GGTTTGGGGTCCTTGAATGGCGTTACGCAAGTGTATGTACATTAGTATGT
ATGTATATATGGTCAGCACTTTCAGCAGAGCATGGATCAACCGTGTATGG
TTGCCAATCCTGCTCGTGGTCAGCTGAACCGGGAAAATGCCCTGTCCCCG
TTCACGCCTGATAATTTGGTCTCGCTATACAGGTTCGGGCTGAATTTGGT
GCTTACTCACGGGATTCCTCCCGCTTTCCACGGCGGCGTCCACGTATACA
GTTCCGTCAACCGCCATCGGACCAGTCGCTAGTTTATCGGGTCACGCAGT
TGCGTGCCGGTGGCGTTCACTGCCAAGAGTCCACTGGGCCAGTAGTCCTC
AAGGAAATTCCAGTAACGGGTGCTGCCATTTTGCAGGTCACCACTGAGCA
TTTTTTTATCGCCTCTCTTACATAGTTGACATGCGTGATCGAGAAATTAT
GGGAGGCGATGTATAGTACAATATAATGGTTTCTCCCCGATGTTATGCTA
TCGCGAGAAGGATTCAGCCATTCCTTTCCCTCATCGACCGTGAAGTCGAA
TTTTTGTGTACTAACGATTTAATCGTTCTCCACTCGTTGGGCATTTTTTT
ATTTTTTTATTTTTTTTTTTTTTTATTTTATTTTTTTAGTGAGAAAAATC
CCGTTTGCGGGGATTGAACTCACGTCCCAACGTGTCAGAAGGTTACGCGG
TTACCTCTGAGCTACCCGCTGGGGCGACCGGCTTGATTACTGGTTTTAGA
TTAATCCCTTTGAAAAAATTAGAGATTGCAAAAGGCGGGGATGGCCGGAA
CACATCCACGGGCTTGAAAAAACGCCAACCGATGGAGCTGAAAATTTCAG
GGTGGGCTAATTTTGGGGCGGGGATTACGAATCCGCGATCACATTTTTTT
ACAGCCATGTCGCCCAACGGCAGCTTTTGTCACTGCTGAAAAATAAGTTT
CCAAAAAATATTTACCTATCATCCCCCCCCACGCCCCAGGTTTGGACCTT
TTGTTCCCTTCACAGAAGAAAGCCAATCGCACTTGTGCACTAATACGAAG
AGCCCGGCACACCTAGCATAAAGCAACCACTGCCCTACACCAGTAGGTTG
GGGCTCTTCCTGGCGTCCAAGCTCTTCCCACAAGTCTTGAGCAACAGCCT
GATCGCTCTCCTGCCACATGGCCCCAGTAGCTCTCAACACCCTGCATTAT
TTTGCCTGCGGCCTGAACTTGATCTCCTGAGGCTCATGTACGCCTACGGG
CTCTACCCCGGTGGCCATGATAACCGTTTCCTTCACTTGGCCGTTCATCA
TTGCAGGAACGAGAGCCGGGTATGTTCTTTCTGCTGATGCGGCACTCCTC
GTACCTACTGTATTATAATAGAGATCTGGCACGAGGAGCAGAAACGAGAC
GCCAACCGAGTCTTAACGCGATACTTTCTAACAACCTTCCGGACGACAAC
CTTCTCTTCCCCTGGTACCGGCCCGAGCCTCCTCTGCGTCAACCTAGTGG
AGTCCGTCCGATGTGGTCGCCGCATCGCACTTCGGAGTGTTCGCTCCCAC
GAAGTGATACATCTCCCGCGTTCCCTCTATACCCGCCAGCTCCGAGCCGG
GCCGGTAGATCTCGTTCTTGCCGATGAGCCTCACGTGCACCTTCCGGATG
CGGTACGGAGACCACTTTGCGCGAAGTACTTCCGCATGCCCTCTTCGCCC
TCGCCCCCCCTCTGGAGGAAGAAGCGTTGCAAGAAGCTCACGACCCCGTC
CGCCCCCATGATACGCGTCCCAAACCTCTCCCGCCTCCTCATGGCGTTCT
TTGCCACGCCGCCGACACCATCGTGGCAACCTTTGAAGTGAGACGTAGCC
GCGAAGTGATGGTCGACGAAGAAGCCGATTTGCCGCACGCTGTCCGCCAG
AGAGCGAAATTTTCGCCTTCGCTTGTTCTGCTCCCCGCATGCATCGGTGA
ACATGTGTATCTGAGACGTCCGGCCGTTGTTTCGGGCGGCGGCAGTGGCT
TCGCTCCCGTCACCGCGCAGGTATTACTAGTAGCCCGCGATCCTGGTAAG
GCCGTGGAGGTGAAAATCGCAATCGCAATCGTGCTATAATAAAATACATG
TCCTCCGAAGTTAAGATAAGATCCAAGTCTCTTGTCACGTTGGGTGTTCT
CGACACACGTCGTCATCTTGTTCGAGGGCCGGTTTTTATGCTTACTGTCG
ACAAGCGTCGTGACTATATAACTCCAACCCTCTACCGGTCTTTGGTCGCC
AGCTGTGCATGATGACGTGGGTTGTGGGGTCAATGACCACTTCGCGTTTG
CAATTCCCAGGCGTTGACACCGCTGCCGCTGGCCCACCACCAGCGGAACT
CATGATCAAGCCTCTCTTTTTGTCTGAACAACTCTCTGAGTGGCTTTACC
CCCCTAAATCGACCAATCGCAATCAATTGCCGAGGCCGGCCGAAAGAAAA
AAAGTTTGGGAATGCGGCGAAAAAATAATTCGAGATGACCCGAACCGATT
TTTTTTTGCCGGTCTTTTTAGACGACGGTTCTGGATGTTGCGTTTTTTTT
TTTTTTTTTTTTTTTAAAATCAGATGTGGAGGGCCGATTTCCCTCTAACA
CGGATGGCGCCTATAGTATTACTATACTATACATGCTTACCAGTAGCGCT
AGTATTAGTGGTATTTGTAGTTCACACTATTTGATTTTTTTAATTGAATT
CTTCTATAAGCTGATGTCAAAAATCCAGCCCGTGGTCACAAGGTAGAAAA
ACAACATTCGGAAGGAAAGAACGTACGATGTACAACTCTATAGTCCATAC
AAAGAGAAAGCGGAAATGGTACAAAAACACTCGGAAAAAGCGACATCTCC
ACATAAACAAAAGGGAAAACAAAACAAAACGTGTGGCTATCGAAACGCCT
GCATATCGAAGGATGATTGAACGAAGGGCCGCGGCTTCAACGAAAGCATA
GAGACGAAAAACGAAGCAAAGCAAAACAAGCGTAACACCAGAGAAAGACG
CCATGACATCTGCAAACGAAACGCCCGGAGGATACAAGTTCGCGCCACTT
GTGGTTAGTCAACAAGGGCGAGTGAACCGGCACGAGCCCGCTTGCTTTGG
GCTATCCTCTCCTTGGTCCTTCCCGTCACGTTCGGGCATATCACTGCATG
CCGTAGTCCACCCTTGGTTTTCTCAGCAACGATCCATTTTGCCATAAAAT
GTCCCGCCCCTTGTTCTGCCTTTATGCGTCATCCCCCGTCGTCCTGGGCT
GCAGTCGTCCAGCGTTGATGCCGAAAGCTCTGAGGTCGTCCAGGAAACAC
CCCATCCACTCTTTTTCCTGACCCCCCACACAGCCTGCGCCCCCCACCAT
TTCTCCGAACATCACGCACTTCGGCAGTCTCGTATCCTCCATGCGCGCCA
CAAATCCCGCAAACAAGATCCGCCTTCTTCGTAAAGTCGCCTCGATGCTC
TCACTTCCCGTCTTGATAAGCGTGCCCAGATAGGAGAAATCGGGTGGTCG
GCGCGCTTGTGCTTTCGCCAACCGATGCAGCGAGTCAAGAGCCTGTGGTG
GGCTCGGCGCAGAGTGTCGTAGTGGCACGCGCGCGGGCTCCACGTGACAC
AGCCGTACAGCATTGTCTCGGGTACGTACCTCGGCTCTTCGCATCCGGAT
TTTGAGCTCGAGGGGAGCGCTCGGTCGGTCGTACAGTTCGAGGGTATACT
TCCGGAAGCTGCACCATGCGTTGCGTCTGCGCCCATATCTTACATTTGTG
ACAGCATGAGTAAGAGATACTGTAGGAAGGGTGTCGTTAGTAGAACATAC
GTGAGTTTTGTCTTGGCAGACTATTTTCCCAACCTAACGTCTTGACACTT
TCTCCCCGATATTTTAGTGTTGACCAATACTTGAATCCGACACGAAACAA
AATATAACATATAACTGAGTTTTATTTTTGTTCATCGTGGACTTTTGCCT
GTTTTGGTGTACCTGCATGGCGATTATGTAAGTGTACAGTATAACGGCCG
GTTTGTCCCCGATATTATGCCGTTGACCCGATGCTACCACCATTGGGGAA
TAATACCCAATTAAATCCCATGAAGAGTTTTGACCTTCTAGGCTGTCTCT
TACGGGCTTGGGATTGGAACTTCGACATCCTTAGAATTTAACAAATCCAA
CCAAGTTCCAATAAACATAAAAGGGCTTTGAGTTGCCCATGTTGTGGTGA
TGGTTCCCTTTGGACCTTTGGTTTTTAGAGATATTGGTGGGACATCAGTT
TGGGAGCGTGGATCTATAGCTGGAGGTCCACCGTGTGCCCACGACAGCTG
GTAGGGTTCCCGCGCTAATTTCAAATTCAAATGATGCGTCAAAAATAAAC
TGCTGTACGGTTCATTTATTGCATGTTAATGTAAACTGCGTGTACTGCAT
GCATGTTGTTGTTGTGTTGTTGTTGGTTCACACATTCAGCGTGTTGTCCT
TGTAACTGAAGAAACTACGGGTTGTGGTCACAAAGAGGTACGAAGGTCAA
CGGGTCACACCATGGTGACAACCCGCTACTCAGACCAACAGGGATCCAAT
TCGCGACAAAAAGTTATGCGACTCTACAAGCAATGGCGCCAACCAATATC
AAAACGGTTCATCAAACCTCCTTACTCCATATCGAGAGCAGCCTCGATCG
ACTCGGATTGTTGTCGCCTACCCACGACCAGCGTTCTCAGCAACAGAGCG
AACAAATTACGCCCAAACCAGCTTTGATCAGGTCCAAGTTTCTCAAGGCC
ACAAATCGTACAAAGATAAGGAAAGCTGAAATATCGAGGTCCGTGGCGGT
GGAGACCTTGAGCTGGTGAAGCCGGCGCGTGATTCAGCATGCAGCCGTCC
GAAGCCCTGTGTATCCTTGAAAAAGCCCTACGAATCTTGCCCGTTCGCCG
CTCCTTGTGGCCCTCGTAGGAAGAAAAATGACCGTGGTTAGAAATCAGCT
TTTCACTCAGAAACCTCCCGGTTCACGCCTTTGATTGTTGCGCACAGAGG
TTCAGCCCTCCCCTGGCTCGTCGACGATCGAGCTGCCCTCCGCCTTCGCC
GTAACCCACCCGATAGAGCACTATCAGGCTCTCCGCGACAGTGCTCCCTG
CCTCTCGCGTGCCGCCACCCTCCCAGGGCACCAAATTGGAGCTCGGAAGA
GGCACACACCTGGGAACACCATCCTCAGCCAACCATACCGCCGCCGCGTC
TCAACCGACAGGCCGAATTGCGAAGGCAGCCAGTTGGCTGCATCTCTCGA
GGGTGGGCCCGGCCCTACACCCGCCGGAAAGAACCTCCCACACTCATACC
CCGAAACCAGGTTATCACATACTTTGCACAGTAGAGTATAGATCAATCGG
TTGCCAACCTGCTCGTGGTCAGCTGAACAGGGAAAATGAATATTTCCCTG
TCCCCGCTCGTGCCTGAAAATTTGGTCTCGCGAGACGGGTTCGGCCGTCC
TGTCCCGTGCCAGCCTGACTATTCTCCACACCCAAGCTGAATCTGATGCT
TGTTATACACGCCATCGGGTCAGTCCCGAGTTTACCGGGTTACGCAATTG
TGAACCGATGACGTTTACGGCCGAGAGCCCGCCGGCACAGGGCCAGGATA
GATCTCAAGGTAGTTCCAGTAACAAGTGTTACCTTTGCAAGTCATGATGG
ACCGATTAATGCGCGCCTCTTTTTTCCCAACCGTTGTCTCGTGTACCTCC
TTCGATATAGCCCATATGAATGAACATTGTTTTCACAGCCCTAGTACACC
ACCAGCAGCACACGGCCGTTGAGACGTCGAACTTAGACTCACTGCTGTAC
GGTCCATTTGTTATTGTATGGTGTGTGTAGGCTAGGCGGCGGGCGATCTT
AGATGCAGCAACGCCACGCAAGGTGCTGCCGCTCCAAATGCTCTAGCTCG
ACGATGATAACACTGGTAGAGGCCGGCATGTCGGACACCCTCCTCGGTAA
CCAAGCTTCGGCCGGCTACGGCGGCGATAAAGAAGGGCTAAGGCCTGCTG
TCTGCTGATGTCTGCCTCCCTTGTTTCTCTTCAAAACGCGGCGCAACTTC
CTCGAGCTGAAAATCCAAGAAAGCTGTCAAGCCCAGACACGGCTAAGAAT
TTGGCCAAAATTCCTAGCCGAGTTTGAGCTTGGCCGGTGACTCAGATTTT
TTATAGAATTCAGAGGCCAAGTTCCAAGAAAAAAACGCCACCCATAACAA
GGCTTTCTTGGAATTATTTCTTGGAACTTGGCCAAATCAAAGTTCTGAGA
ACGAAGTTCTGTCCCCATAAGAGACGGCCTTATTACAGCCCATGTTCCCA
CCTAAACGTTTTGACGATCCCCCCCCCCCCCTGACTGGGTGGATGCTCTA
TTATATTGATTAATATATTGATATTAATATTGATATTAAATATTTTTATG
GGCCGGTCGCCCCGGTAGCTCAGAGGTACCTCGTAGCCCTCTGACACGTT
GGGACGTGAGTTCGATCCCGGCAAACGGGATTTTTCTCACTAAAAAACTA
AAATACAAAATAAAAATGCCCAACGGGTGGGGAACGATTAAAATCGTTAG
TACACAAAATTCGACTTCACGGTCGACGAGGGAAAGGAATGGCTGAATCC
TTCTCGCGAGAAAAATTAAGGCACGCACCGCAGAAAGAAGGTGGATGAGA
AATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGGTGGTACGTCCAACGA
ACTTGATGTCCAGAATGAATCGGAAGAAAACAACACACACGCACATATTA
ATATTAATAGAAAATGTAGAGGCCTTCAGTTTTTTCTTTTCACATACTAA
AGGTCTAGAGCCTATATATATGTAAAGCTTCATTGCTGTACTTTACTTTT
TGTTACAGTAGTCGGACGTTCCCGAAGCTATACTAATATACTAATACACT
ATTATAGCCTATACTAGTATACTAATGCACTATTATAGCCTATACTAATA
TACTAATACACTACTACACTACTATAGCCTATACTAATATACTAATACAC
TACTATAGCCTATACTAATATACTAATACACTACTACACTACTATAGCCT
ATACTAATATACTAATATACTAATATAGCCTATACTAATATACTAATATA
CTAATACACTATTATAGCCTATACTATTATACTAATACACTATTATAGCC
TATACTATTATACTAATACACTACTATAGCCTATACTAATATACTATTAT
ATACTAATACACTATTATAGCCTATACTATTATACTAATACACTATTATA
GCCTATACTATTATACTAATACACTACTATAGCCTATACTAATATACTAA
TACACTACTATAGCCTATACTAATATACTAATACACTACTACATTACTAT
AGCCTATACTAATATACTAATACACTACTATAGCCTATACTAATATACTA
TTATACTAATACACTATTATAGCCTATACTATTATACTAATATTATTATA
GCCTATACTATTATACTAATACACTACTATAGCCTATACTAATATACTAT
TATACTAATACACTATTATAGCCTATACTATTATACTAATACACTACTAT
AGCCTATACTAATATACTAATACACTACTATAGCCTATACTAATATACTA
ATACACTACTATAGCCTATACTAATATACTAATACACTACTATAGCCTAT
ACTAATATACTATTATACTAATACACTATTATAGCCTATACTATTATACT
AATACACTATTATAGCCTATACTATTATACTAATACACTACTATAGCCTA
TACTAATATACTATTATACTAATACACTATTATAGCCTATACTATTATAC
TAATACACTACTATAGCCTATACTATTATACTAATACACTACTATAGCCT
ATACTAATATACTAATACACTACTATAGCCTATACTAATATACTATTATA
CTAATACACTACTATAGCCTATACTAATATACTAATACACTATTATAGCC
TATACTAGTATACTATTACACTATTATAGCCTATACTATTATACTAATAC
ACTACTACACTACTATAGCCTATACTAATACACTATTATAGCCTATACTA
TTATACTATTATACTAATACACTATTATAGCCTATACTATTATACTAATA
CACTACTATAGCCTATACTAATATACTAATACACTACTATAGCCTATACT
AATATACTATTATACTAATACTATTATAGCCTATACTATTATACTAATAC
ACTATTATAGCCTATACTATTATACTAATACACTATTATAGCCTATACTA
ATATACTATTATACTAATACACTATTATAGCCTATACTATTATACTAATA
CACTATTATAGCCTATACTATTATACTAATACACTACTATAGCCTATACT
AATATACTAATATACTACTATACTATACTAATATACTATTATACTAATAC
ACTATTATAGCCTATACTATTATACTAATACACTACTATAGCCTATACTA
TACTAATACTAATACACTACTATAGCCTATACTAATATACTAATACACTA
CTATAGCCTATACTAATATACTATTATACTAATACACTATTATAGCCTAT
ACTATTATACTAATACACTACTATAGCCTATACTATTATACTAATACACT
ACTATATAGCCTATACTAATATACTATTATACTAATATACTATTATAGCC
TATACTATTATACTAATACACTACTATAGCCTATACTAATATACTAATAT
ACTAATATAGCTATACTAATATACTATTATACTAATACACTATTATAGCC
TATACTATTATACTAATACACTACTATAGCCTATACTAATATACTAATAC
ACTATTATAGCCTATACTAGTATACTATTACACTATTATAGCCTATACTA
TTATACTAATAATACTATACTATATATACTAATACACTACTATAGCCTAT
ACTATTATACTATTATACTAATACACTATTATAGCTATACTATATACTAA
TACACTATTATAGCCTATACTAATATACTAATACACTACTATAGCCTATA
CTAATATACTAATACACTACTATAGCCTATACTAATATACTAATACACTA
CTACACTACTATAGCCTATACTAATATACTAATACACTACTATAGCCTAT
ACTAATATACTATTATACTAATACACTATTATAGCCTATACTATTATACT
AATACACTATTATAGCCTATACTATTATATATACTAATACACTACTATAG
CCTATACTAATATACTATTATACTAATACATACTATTATACTAATATACT
ATTATACTAATATACTAATACACTACTATAGCCTATACTAATATACTAAT
ACACTACTATAGCCTATACTAATATACTATTATACTAATACACTATTATA
GCCTATACTATTATACTAATACATACTATAGCCTATACTAATATACTAAT
ATACTAATATAGCCTATACTATATACTATATAATACATTATATAATACTA
ATACACTAGCCTATACTAATATACTAATACACTACTATAGCCTATACTAA
TATACTATTATACTACTACACTACTATAGCCTATACTAATATACTAATAC
ACTACTATAGCCTATACTAATATACTATTATACTAATATACTATTATACT
AATATACTATTATAGCCTATACTATTATACTAATACACTACTATTATAGC
CTATACTATTATACTAATACACTACTATAGCCTATACTAATATACTATTA
TACTAATACACTATTATAATACACTACTATAGCTATTATACTAATACACT
ATTATAGCCTATACTATTATACTAATACACTACTATAGCCTATACTATAC
TAATACTAATACACTATTATAAATATACTATATATACTAATACACTATTA
TAGCCTATACTATTATACTAATACACTAATATACTACTATACTAATATAC
TAATACACTATTATAGCCTATACTAATATACTATTATACTAATACACTAT
TATAGCCTACTATTATACTAATACACTATACTAATATACTATACTATAGC
CTATACTAATATACTAATAATACTACTATATATATACTAATACTACTATT
ATACTAATATACTAATATATTATAGCCTATACTATACATACTATACTAAT
ATACTATTATACTATTATAATATACTAATATACTACTATACTAATACACT
ATTATAGCCTATACTAATATACTATTATATATTATAGCCTATACTATACT
ATTATACTAATACACTATTATAGCCTATACTAATATACTAATACACTACT
ATAGCCTATACTAATATACTAATACACTACTATATTATATAATTAATATA
CTATTATACTAATACACTATTATAGCCTACTATATACTAATACACTATTA
TAGCCTATACTAATATACTAATATTACTATATAATAGCCTATACTATTAT
ACTATTATACTAATACTATTATAGCCTATACTATTATACTAATATACTAA
TACACTATATAGCCTATACTATTATACTATTATACTATACTAATATTACT
ACTACTATAGCCTATACTAATACACTATTATAGCCTATACTATTATACTA
TTATACTAATACACTATTATAGCCTATACTATTATACTAATACACTACTA
TAGCCTATACTAATATACTAATACACTACTATAGCCTATACTAATATACT
AGTATACTATTACACTATTATAGCCTATACTATTATACTAATACACTACT
ATAGCCTATACTAATATACTAATACACTATTATAGCCTATACTAATATAC
TATTACACTATTATAGCCTATGCTATTTATTATAGTATTCATAGTAGCTC
TAATACCAAGTGCATTGCTTGTACGAGCCCAAGCCAAAAGAACATTACAT
TGTGCAGATTCGCTTTTCATCTAGAGCCTATGGCTTGATGTGGAAAGACG
ACGTGTGTGGCAGGGTGCTCGTGTTTTTTTTTTTTTTTTACAAAACATAA
ATGGACACCGGTAAAGTGACAGCTGCAACAGAGAGTCAGTCCCATCGACG
CCGGCGCGCCGTCGAGTCAGTCAGCAAGGAGCAAGCATCAGTCCAATATT
TCCTCCCTTTCATGCCTTCTTCCAGGCGTACCACGAGGGAATCTTCAGCT
CGGTTGGAGTGGGGGGGGGGGGGTGTTGCCTGTCTCGAGTGCTTCGTTGC
TGGCAGCAGTGGCACAAAGAAAAGCTGTTAATGAAATTTTGCAATTTTGC
ATACTCAGCTTATTCGATTTTCCCCATCTCTTCACTACCTGACTTAGAAC
GCCTTCCGTCTACAATAAACCCACCACCAACGTCACCCCCTTCATCCCAT
CGCAGACATGCACTACATTTGAGACCCGCTGTCCAGCTTCTTCGACCCGC
CCACCCCGTCCTGACTCCCAGCCTCCCCGCGCCTCTCTTCCACCGCGCAC
GATCACGATGATAATCACACCGTTCGTCAGCGACCTGCACGCGCTGAGGG
CCGTCGGTTATTTGGCCCTCTCCGTCGAAGCGCTGATCGTGACGTGGTTC
TGGCCGCGCCTATTCCCCGCGCGTCGTGTGGAGCGGTCAAGCCAGCGCCA
ACATCGCCACAGCCACCGCCGCCGCCGCGACGATGCTACTGCTCAACACG
CGATCAGCCCAGATTCCGTGAGGAGCCGCAGGGGCAAAAGCGTGGAACGC
TGGGGGGAACAGGACGACGTGAGCGAGCTGTGGAGCGACGGGGGCAGAAA
CAACGAACTTCCGTCGCCTGTCCACTCCGACGGCATTCCCGCTCTGGCGA
GCAGCAGGGGTGGTCGCGGCGCGAACAA GTGAGTTCCATGGTGGTGTTGT
TTTTGTTGTTTTCGTGACGAGTTCCGTTTTCTTTTGGAGCTGATGATGTT
TCTTCCCCGGGGTTTCTCGTGAAAAGGAGGCGTCTAATGTATTTTTCACG
TAGAGTTTCGCGATGCCATACATGGCATAAGCTCATCGTCGGTATCGGCT
CCTGTCTGGGTTCTTGTGATTGAAGTCTTTTATCAGTTTACTGCGGCCGA
TTCCGCCTGTGGTCTGCTGGAGTGGAGCGTGTGCTCGTTTCGATTATGGC
CTTCGGCTTTCATGAGAAAACACGACAAGAGTTGCCACGGGAAAGCACGC
TTCCGGAAGTCATGCGAGCTGCTTCCTGGAGCGCCTGTCCCCGTCGCGAC
CACGTTCCTTTTCCCCCCTCCTCTCCCTCCCCCCGCCCATCGTTAGAATA
TCGAGCCACCCTCAGCCTTATCGATTCGCTAGAAACGGTTTTTAACGCCG
CCTCCGTCTGAGACGCCCGCTGTTTGTTCCCCGCTGTGGGAGCCTTAACG
CTGTCTCACAGAAGAAGGATTACAAGATATAATAGCGAAGCAAACCCTTC
CACCTGGGAGAATTTACTTGCGACTCGGCCAACGGCGATCGTAGGTCAAG
ATTCGATCCCCGCTAAGCTTCCTGGGGCCAAGAAGGATGGCTCCGTTACG
GTAGGCTGCGAAAGCACTGGAGAATCTTACGCCGCGGTTCTTTCTCTCAT
CTTGCTCATTTTTTCTTCTTAATTTTTGTTGCTTTCTGTGGCAGCCTGTC
AGAGGTCATCGGTTTTCGGCGACGTAGGCTCACGGAAAAGAGGGTTGTGC
GTGTCTGCTATCTTCTGCATGCCATTGGTGCAGTCCCCTCCTCGGCCCGA
GCCTGTACTCGAGCGTCGAGCTGTCGCGCCCGAAGATGGTGATGCTGGCT
GATATATACTCCTGTATATATATAACACCTGGTAGTATTTATGTTTTTTT
TTGTTTTGTTTTTGTAGGAGCGGGTCCCTCTACGATTGAGCTCTACCCTT
TTCTTTCTTTTCAATTTCTTTTCAACGTGTGCCCTGATCTCCCCGATCCG
CCTTGTGCCCCTCGCGCGGAACAGCGGCAAACAAGGGCGAGGGTGGGCTG
GGTGCGGCAAACAAGGGTGAGCTGGGTGCGACGCATTTTCCTCGTCCTGT
TCACGCTCTCGTCAACTTACCTCGCCACTTGCCTGTTTTTTTCCGGGACA
TGGAACCTCATACCCGTCCTGGGAAAGCCTCCTAACCAGGGTACCGTTTT
CGTCGGAGTGTTTCCCGGCTCGTGTGGTACGGCGGAGTGTTGCGTCGTTG
CGGGGACTCGGGAGTCGGGAGAAATCGGAGGGGCGAAGAGGGGGGAACGG
GAAGGAGTTTTCTGCAGAGAGTGGCCTAAAGTTGACGACGAGGTCCGCAG
GGAGGAGGAGACGAGACCGCGAAGAACGGTAGAGGAAGCTAGAAAAGAGG
ACGAGAAGGAGAGATCGAAGCACAAGTGGGAGTTTTGGGGGCGAGAAGAG
CGAGGGGACATGCCAAAGAACGGGCGACAGGATAGTGCCTCTGACGAGGC
TGCTGCCGAGGACGGTGCTGACGTTGACGCTGCGGAGACCGAGCGGGAGC
GAGTGAGGCTGATGAATGAGAAAGGGAGGGAAGCTGCAGCGGCTACGAAG
GTGGAGGAG GTTGGTGACAGGGTGCCATTGTGGATGCCGCCTTCAGCCGG
CGGAGTAATGCTGCCTTCGAGTGTTCATCGAGTGAAGTTGAAGTTTACGG
TATCGCAAACACCGGAGATGGAATTTTTCAAACACGGGCGCGTTTCGTTT
TGACTACTGCCTTTGGTAGGGGACCGACGCCGCAAGCTCCGACTGCTGGC
TTTCAAGGACTTTTGCTCTTGCGCTGTTTGAGTAGTCACCGAGAAAAGCG
AGCAGGAACACACGATGCACCGAGTGGTCGATTCTAATTATTTGCCCTGC
GGCATCCTCCCTCCCCACGCCGCACGGTAACCACCTTTACCCTCCGATAT
GTTGTGTTTTTTTATGGGTTTTTTTTACCCCTGATTTTTGTGTCCCGGGT
TGCTGAGCTAAGAAGACTAAGACAGCGGGCACTACCGCCACACCAACAGC
GGAAGAAGACGTCTATCGACGACGTGAGATTGCGGAAGCCGAGCGACTGC
GAAAAGAAGAGTTTGTTCTGTCGGTGGAGCACGTAGTCGCTCGGCAGCAG
GGGCTGTGGGAAAGGCTGTGGGGAGGGCGAAAGCCGGGGAAGAACAAGGG
AATCGCGCCGGAGACGTGCTCGCATGCGCTCGAGGAGGGCGATTCTCTCG
GGTTGGAGCAAGCACTGCGCAACGGACCCACGGAAATGAAGCTGATGTCG
AATGGAGACCTCGTTCTCTCCTTTGATGGCGTGGCG GTGAGAGCAAGAAC
GCCTCCTTAAAACGTTTCATTTTTCGGGCATAGTGATGAGGTCAGTCATG
GTAGAAATTTTAAAGGCAGTCAAGAATACCGACCGTCATTCCCTTCCCGC
AGAGGAACCCTTCCTTTTGGATTGAAGCGATAAAGACCCGAAGGAAATTC
GTTTGCTCCACGGCTTAGCATTCTTGGGGGGAGGGGCTCGTTTTGTGTTT
CACCCAACCAGGGGTGAACTGCTTTTAAAGTAATAAAAATATCAATTGAC
TTGAAACGTACCAGTGTATTTCGCCTGACGCGGTGATTCCTCGTCCCCCA
ATAGACACGAGCTTTTCTTGCGAGGTCTAACGTCTCTCCTCCACGTTGGC
ATTGTCATCCGCGACGCTGCAGGTATGGTTGGCGCAAGGATCGAAGAAAC
GCCGCGGCGTGCTGGGCTGGATCTGGCGTAAGATTCGACGCCGAACCACG
CTTCGGCAATGCTCGAAGTGCCGTTTCACGGTCACGTCTAGCGGACAGCT
G GTGCGTGCAGAGGTTACAGCCTATAATAGATTTTTGTGCCTCTCAAGCT
CTATACAAGTCGAATAGGTGGCGGCAGTCGTAAAATAGTTGGGAGCGGGT
AAGGTTGCCAACCTTGTGTCGACAGATGCCCTCCGCAAATATCAAGTCGC
TAAGCCGTCGAAATTCGGTTTTTAGTTGCTGCCGAAATTGTGAGCACTCG
CTGGGGGTCGCTTTGGTATGATTGAAAAGTCTTCACAGAAGCTGCTTTAC
CCCCCCGGTTCGTCCCCGTCCCAACCCACCCAAACAAACGCCCCTTCCCT
GCCACAGGAAATTCGCGAAAGGCGAAAGCTCTTATGGTCGGGCGGTCTGC
CAAAACGAAATGCAAAGCAAAATAAAGGGATTCCGGAGGCGACCTCGCGG
GGAAGCGCTTCCGCACACGCCGAGAGCTGTCTGGGTGAGGTCAGGAGCAC
GTACCGATTGGAGGTCACCGATGGCGGGAATGCCGTCCTGAAGCTGGGGG
ATTCCGAGGTGGTGTGGAAAGCATTGAGCAGATAA ACTCATTTGTGGCTA
GGGGTGTGAATGTTTTTAGGATTGGTTTGCGTGCCGGTACATGTCTGTTG
GGTTTCCTTGCGATTTTAAGACGCTGAATTTGTGCGGTGGATATTGACAA
CGAAGCGTTGAGCACGTGTAGCAACTAAAAGGTACAGTAGTTCGCACACT
GAATGCGGGTACGTAGGGGGCGGCCGCATAAGGTTACGGGCGTAGCCGAT
GGCGTCCGGTTTTGAGGTGGTTGTTGATCACCGCGTCGAAGTGGGGCGCG
GCTGTGAGCCAAGTCGCGGCCGCTTGTTTTGGGGTCGGAGCCGTGGATTG
TTGCCGTCGCCACTTTGTTGACTATTAATAGAGCTGTCTTTGTCATGTAC
GCAAGTGGCTGCTGTATCGAGGTCGATGCATTCCAAACGCGTTTATATAT
AGGAAAAAGGTACATAATCCACAACCTAGCTTGTGCTCGCGAGCGGATTG
CCTTTTTACGAATCACTAAGTGGTCTCACTCAGTCCCACACCAAGTTTAC
GAAATCCTTGATTCCATTGCCGTGTGAGGAGATAGATCGGTTCAAGATTC
TTAGAGCTTTCTACTCAACCTAGTACAGTAGCAGATACACGAGAAAAACT
AGCATAGTATGAAGAATGACTACGATTACGAGGTGGTGAACGAGATTTTG
TGGTGCAGTGAAATCCGCGAGCTTCGTCCAACCAAAAGCTGGAGCGCGAG
CGGCGTTTCATGTGTTGGTTGGTATTTTGTCTCATGCGCCACATTCATGA
CAATACGAGCCTCTCGCGGGAAGAAACGGCTTGGAGGATAGACTAGATGC
CCGCTTGGGGCTCAGCGACCTAGTTTGAGGCCATTCCTGTCTCCGTTGTC
GACGCAGGAAATGATGGGATGAAACTGTATTACAGTTTCATCCCATCATT
AATAACTGTATTACAGTTTCTCTCGGTTTTGCCAGTTTTTTCGGAAGCAT
GTTTTTCTTTCCGGTGGCGAGAAGACAGTGTTCCAATGAAACGACGCCAT
TCGTGAGTAGGTGCAATGGTTTGTTTAGAAACTCTCGATTGGTCGAACGT
AACAGGCAGATAGAGAGACATACGCCCACATCGCCTTCCACCGTCATCTA
TCTCACTGGCGACTGCTCTTTCCTTTCAGAATCAGGAC back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1016:237168..255705-
>mRNA_A-nodosum_M_contig1016.12.1 ID=mRNA_A-nodosum_M_contig1016.12.1|Name=mRNA_A-nodosum_M_contig1016.12.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1833bp|location=Sequence derived from alignment at A-nodosum_M_contig1016:237168..255705- (Ascophyllum nodosum dioecious) back to top