mRNA_A-nodosum_M_contig1016.11.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_A-nodosum_M_contig1016.11.2 vs. uniprot
Match: A0A6H5K2Z4_9PHAE (TMF_TATA_bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z4_9PHAE)

HSP 1 Score: 395 bits (1014), Expect = 3.120e-110
Identity = 337/702 (48.01%), Postives = 388/702 (55.27%), Query Frame = 1

Query: 2077 DLAAALAASQEREDALTARLLMAEELLAERERQLESTNISMAEIMQNGGGGREGMAGAGXXEDVAAVVAAAEKETISRERREAERVMAAARERHRVEVSRLEGVLEAEKKKAKAATETVKGWERRAEEFEEKDKMLKAYMEEGQALAYKQSEMEKSVRKARGSLRGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANQTQSLVAMGAVSQASSQKLTTAEK---ELEKTREALSAKKAALDKSWGEIKELKRNAAELRADRDALNKSLEDGGKARQATESQAKEWQVRENSLLLEQGQLQETLERVRREADRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMQRVSELEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRRADMERRDAKDTAATLREQIEEMRRA--QAKGFFG-----------PGPGSRRDSISSFSVEDPFGDGLRSGPGGVGNGTPXXXXXXXXVGGGGVGVGVASFAEVERLQSLARQKEGQVAVLQQRLEEMQAIRDALTEEVTSLGRRNTELEALAKAVPLLRDQAIELQRKNSVLLDLLGEKTEELEAMQSDMKEVQNMYRAQYNELLSRASMG 4134
            DLAA      EREDAL ARLL+AEELL ERERQLESTN++MAEIMQNGG          XX      +                      R+RH  EVSRLEG++EAEK+K KAA + V+ WE +AEEFEEKDKMLKAYM+EG  LA+KQSEMEK+VRKARG+LRGV                XXXXXXXXXXXXXXXX    QSL AMGAVSQASS +L TAEK   ELEK REALSAKKAALDKSW E K       ELRA++DAL KSLEDGGKA++ATESQ ++WQ RE++LL EQ QLQETLERVRREADRR   XXXXXXXXXXX                                                                                                             + QR SE+E E                                     RR + ERR++KD  ++L+EQ++ +RR   Q    +G           P   SRRDS  SFS++D F         G  +GTP                  ASFAEVERL SLA+Q++GQV VLQQRLE +QA RDALTEEVTSLGRRNTELEALAKAVPLLRDQA+ELQ KN VLLDLLGEKTE+LEA+Q+DM+E+QNMYRAQY+ELL+RA  G
Sbjct:  684 DLAAXXXXXXEREDALMARLLVAEELLLERERQLESTNLAMAEIMQNGGKAXXXXXXXXXXXXXXXDL----------------------RDRHAREVSRLEGLIEAEKRKGKAAADAVRSWETKAEEFEEKDKMLKAYMDEGAMLAFKQSEMEKTVRKARGALRGVQEERDSLAKENTALQAXXXXXXXXXXXXXXXXXXXXQSLAAMGAVSQASSHRLNTAEKATTELEKLREALSAKKAALDKSWAETKXXXXXXXELRAEKDALTKSLEDGGKAQKATESQLQQWQDRESTLLREQSQLQETLERVRREADRREDDXXXXXXXXXXXWKEAVGRAEALQAEAHESTAPLLRQVRSLQEEMRLRQEAVRAAEASLTDRAASAELACREAERRRRVAEAAVAASDERAHKAEGEVESLGFKLTRLETSNEELKAKCDQHAQRASEVEVELSTLKESSRASALKHKSTEAKLRLQLGEAEDRAAEALRRLEGERRESKDITSSLKEQLDALRRGGQQNSRLYGGSLDRGGRRGPPETWSRRDS-GSFSIDDSFA--------GSQSGTPRAGVAANGXXXXXXXXXGASFAEVERLHSLAKQRQGQVDVLQQRLEAVQATRDALTEEVTSLGRRNTELEALAKAVPLLRDQALELQDKNGVLLDLLGEKTEDLEAVQADMREMQNMYRAQYDELLTRAGAG 1354

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BLAST of mRNA_A-nodosum_M_contig1016.11.2 vs. uniprot
Match: D7G6G4_ECTSI (TMF_TATA_bd domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G4_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 8.790e-92
Identity = 315/691 (45.59%), Postives = 363/691 (52.53%), Query Frame = 1

Query: 2110 REDALTARLLMAEELLAERERQLESTNISMAEIMQNGGGGREGMAGAGXXEDVAAVVAAAEKETISRERREAERVMAAARERHRVEVSRLEGVLEAEKKKAKAATETVKGWERRAEEFEEKDKMLKAYMEEGQALAYKQSEMEKSVRKARGSLRGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANQTQSLVAMGAVSQASSQKLTTAEKELEKTREALSAKKAALDKSWGEIKELKRNAAELRADRDALNKSLEDGGKARQATESQAKEWQVRENSLLLEQGQLQETLERVRREADRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMQRVSELEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRRADMERRDAKDTAATLREQIEEMRRA--QAKGFFG-----------PGPGSRRDSISSFSVEDPFGDGLRSGP---GGVGNGTPXXXXXXXXVGGGGVGVGVASFAEVERLQSLARQKEGQVAVLQQRLEEMQAIRDALTEEVTSLGRRNTELEALAKAVPLLRDQAIELQRKNSVLLDLLGEKTEELEAMQSDMKEVQNMYRAQYNELLSRASMG 4134
            REDALTARLL+AEELL ERERQLESTN++MAEIMQNG   + G AG G     AAV                    A  R +H  EVSRLE ++EAE++K KAA + V+ WE +AEEFEEKDKMLKAYM+EG  LA+KQSEMEK+VRKARG+LRGV       XXXXXXXXXXXXXXXXXXXXXXXXX                                    AKKAALDKSW E            A++DAL KSLEDGGKARQATESQ ++WQ RE++LLLEQ QLQETLERVRREAD R                                                                                                                           + QR SE+E E                                     RR + ERR+AKDT ++L+EQ++ +RR   Q    +G           P   SRRDS  SFS++D F  G +SG    G   NG  XXXXXXXX          ASFAEVERL SLA+Q++GQ  VLQQRLE +QA RDALTEEVTSLGRRNTELEALAKAVPLLRDQA+ELQ KN VLLDLLGEKTE+LEA+Q+DM+E+QNMYRAQY+ELL+RA  G
Sbjct:  705 REDALTARLLVAEELLLERERQLESTNLAMAEIMQNGS--KAGSAGDGSDGGAAAV--------------------ADLRGQHAQEVSRLEDLVEAERRKGKAAADAVRSWETKAEEFEEKDKMLKAYMDEGAMLAFKQSEMEKTVRKARGALRGVQEERDSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKAALDKSWAETXXXXXXXXXXXAEKDALTKSLEDGGKARQATESQLQQWQDRESTLLLEQSQLQETLERVRREADHREDEAKDRQEDVRRRWKEAVGRAEALQAEAHESTAPLLRQVRSLQEEMRLRQEAVRAAEASLTDRAASAELACREAERRRRVAEAAVAASDEQAHKAEGEVESLGFKLTRLETSYQELKAKCHQHAQRASEVEVELSTLKESSRASALQHKSTEAKLRLQLGEAEDRAAEALRRLEGERREAKDTTSSLKEQLDALRRGGQQTSRLYGGSLDRGGRRGPPETWSRRDS-GSFSIDDSFA-GSQSGTPRAGVAANGXXXXXXXXXXX--------XASFAEVERLHSLAKQRQGQADVLQQRLEAVQATRDALTEEVTSLGRRNTELEALAKAVPLLRDQALELQDKNGVLLDLLGEKTEDLEAVQADMREMQNMYRAQYDELLTRAGAG 1363

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BLAST of mRNA_A-nodosum_M_contig1016.11.2 vs. uniprot
Match: A0A835ZDC3_9STRA (TATA element modulatory factor 1 TATA binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDC3_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.590e-15
Identity = 49/105 (46.67%), Postives = 69/105 (65.71%), Query Frame = 1

Query: 3808 VERLQSLARQKEGQVAVLQQRLEEMQAIRDALTEEVTSLGRRNTELEALAKAVPLLRDQAIELQRKNSVLLDLLGEKTEELEAMQSDMKEVQNMYRAQYNELLSR 4122
            +E+LQ   R KE + A LQ+R    +  RDAL +EV +LGRR+ ELEA    +P   +QA EL RKN+VLL+LLGEK EE+E +  D++E +  Y+ Q  EL+ +
Sbjct:    1 MEKLQGALRAKEREAAHLQRRAAAAETERDALADEVAALGRRSAELEAALSTLPDTVEQAQELARKNNVLLELLGEKEEEVEQLLEDLEESRAAYKTQLEELMQQ 105

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BLAST of mRNA_A-nodosum_M_contig1016.11.2 vs. uniprot
Match: A0A7S2BWU5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWU5_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 5.960e-14
Identity = 44/101 (43.56%), Postives = 66/101 (65.35%), Query Frame = 1

Query: 3796 SFAEVERLQSLARQKEGQVAVLQQRLEEMQAIRDALTEEVTSLGRRNTELEALAKAVPLLRDQAIELQRKNSVLLDLLGEKTEELEAMQSDMKEVQNMYRA 4098
            S  ++E+L     Q+E + A   +RL +++ +RDALT EV  LG+RN +L   A     +  +A   ++KN VLL+LLGEKTEELE +QSDM E++ +YR+
Sbjct:   19 SVVQLEKLGLALSQREAEAASTAERLRQVEEVRDALTSEVLELGKRNQDLSKAASKAATMERKASAFKKKNDVLLELLGEKTEELEDLQSDMSELKKIYRS 119

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BLAST of mRNA_A-nodosum_M_contig1016.11.2 vs. uniprot
Match: A0A7S2HQC5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQC5_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.910e-11
Identity = 43/106 (40.57%), Postives = 68/106 (64.15%), Query Frame = 1

Query: 3775 GVGVGVASFAEVERLQSLARQKEGQVAVLQQRLEEMQAIRDALTEEVTSLGRRNTELEALAKAVPLLRDQAIELQRKNSVLLDLLGEKTEELEAMQSDMKEVQNMY 4092
            GV     S  E+E+L  + +++E ++ +  ++L   Q  RDALT EV  LG RN EL   A   P+L  +A+  ++KN +LL+LLGEK+EELE +Q DM+E++ ++
Sbjct:  285 GVPTAGVSVLELEKLHQVLKRREAELGIQAEKLRVTQTARDALTSEVLDLGERNQELMKAAARCPVLEKRALATKKKNDILLELLGEKSEELEELQGDMEEMKRVF 390

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BLAST of mRNA_A-nodosum_M_contig1016.11.2 vs. uniprot
Match: A0A197JBM8_9FUNG (TMF_TATA_bd domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JBM8_9FUNG)

HSP 1 Score: 70.5 bits (171), Expect = 2.230e-10
Identity = 41/118 (34.75%), Postives = 69/118 (58.47%), Query Frame = 1

Query: 3769 GGGVGVGVASFAEVERLQSLARQKEGQVAVLQQRLEEMQAIRDALTEEVTSLGRRNTELEALAKAVPLLRDQAIELQRKNSVLLDLLGEKTEELEAMQSDMKEVQNMYRAQYNELLSR 4122
            GGG G        +ERL ++ RQ EGQV  L +++      +D L++E+  +     EL+  A  VP L  +   L+ ++   L++LGEKTEE++ +++D+ +V+  YR Q NELL++
Sbjct:    4 GGGSGSNAGQAVAIERLNTMVRQLEGQVTFLAEQVRSANRNKDELSDELVKVTMELEELQGAAAKVPNLEQELTLLKDRHKAALEMLGEKTEEVQELRADILDVKEAYRDQINELLAQ 121

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BLAST of mRNA_A-nodosum_M_contig1016.11.2 vs. uniprot
Match: A0A397SER6_9GLOM (TATA element modulatory factor 1 TATA binding-domain-containing protein (Fragment) n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397SER6_9GLOM)

HSP 1 Score: 69.7 bits (169), Expect = 2.930e-9
Identity = 41/104 (39.42%), Postives = 65/104 (62.50%), Query Frame = 1

Query: 3808 VERLQSLARQKEGQVAVLQQRLEEMQAIRDALTEEVTSLGRRNTELEALAKAVPLLRDQAIELQRKNSVLLDLLGEKTEELEAMQSDMKEVQNMYRAQYNELLS 4119
            VE+L S  R  EGQV+ LQ +L      RD L +E+  L  +  EL   A+ +P++  Q  EL  +  + L+LLGEKTE++E +Q+D+K+++++YR Q  EL +
Sbjct:  107 VEKLNSSVRHLEGQVSTLQAQLHITTKNRDELADELVKLTVQMEELSIKAERLPVVEQQFHELNERYQITLELLGEKTEQVEELQADIKDMKDVYRNQITELAA 210

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BLAST of mRNA_A-nodosum_M_contig1016.11.2 vs. uniprot
Match: A0A7S2SPH7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPH7_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 8.960e-9
Identity = 42/101 (41.58%), Postives = 64/101 (63.37%), Query Frame = 1

Query: 3769 GGGVGVGVASFAEVERLQSLARQKEGQVAVLQQRLEEMQAIRDALTEEVTSLGRRNTELEALAKAVPLLRDQAIELQRKNSVLLDLLGEKTEELEAMQSDM 4071
            G G     A   ++E+L+ L +Q+E + A  Q+RL  ++ +RDALT E+  LGR+N E + LA+    L+ +   L +KN +LL+LLGEKTEELE  Q ++
Sbjct:  573 GSGASAQAAYVMQLEKLRLLLKQRESENAGNQERLRHVEEVRDALTHELQELGRQNAEFKVLAEQSAALKQEVKVLVKKNDLLLELLGEKTEELEEAQDEL 673

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BLAST of mRNA_A-nodosum_M_contig1016.11.2 vs. uniprot
Match: A0A2G8KM58_STIJA (Putative TATA element modulatory factor isoform X2 (Fragment) n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KM58_STIJA)

HSP 1 Score: 68.2 bits (165), Expect = 1.310e-7
Identity = 38/105 (36.19%), Postives = 62/105 (59.05%), Query Frame = 1

Query: 3808 VERLQSLARQKEGQVAVLQQRLEEMQAIRDALTEEVTSLGRRNTELEALAKAVPLLRDQAIELQRKNSVLLDLLGEKTEELEAMQSDMKEVQNMYRAQYNELLSR 4122
            +E LQS  + KEG+VA LQ  + +++  R ++ EE+  L   N  LE   K VP L  +  E+  K + +L + GEK EE+  ++ D++E++ MYR Q  +LL +
Sbjct:  530 IENLQSHVKLKEGEVAQLQGEITQLERTRASMAEEIVKLANLNETLEDEVKVVPELTKKMREIDHKYNAVLQMYGEKAEEVTELRLDIQEIKEMYRQQIEDLLKK 634

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BLAST of mRNA_A-nodosum_M_contig1016.11.2 vs. uniprot
Match: A0A4D9CLU0_9STRA (TMF_TATA_bd domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLU0_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 7.390e-7
Identity = 40/100 (40.00%), Postives = 64/100 (64.00%), Query Frame = 1

Query: 3811 ERLQSLARQKEGQVAVLQQRLEEMQAIRDALTEEVTSLGRRNTELEALAKAVPLLRDQAIELQRKNSVLLDLLGEKTEELEAMQSDMKEVQNMYRAQYNE 4110
            E+     RQKE ++  LQ RL +++  RDALTEEVT LGR+N+   A A        +   L ++  VLL+LLGEKTEE+EA++++ + ++  +R+Q ++
Sbjct:  609 EKTHQALRQKETEIQHLQSRLHDLERTRDALTEEVTVLGRQNSLQAAKAMRSAAEVTKLRGLSKEKEVLLELLGEKTEEVEALEAETESLKARFRSQLDQ 708

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig1016.11.2 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig1016.11.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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Match Name	E-value	Identity	Description
A0A6H5K2Z4_9PHAE	3.120e-110	48.01	TMF_TATA_bd domain-containing protein n=1 Tax=Ecto...	[more]
D7G6G4_ECTSI	8.790e-92	45.59	TMF_TATA_bd domain-containing protein n=1 Tax=Ecto...	[more]
A0A835ZDC3_9STRA	2.590e-15	46.67	TATA element modulatory factor 1 TATA binding prot...	[more]
A0A7S2BWU5_9STRA	5.960e-14	43.56	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A7S2HQC5_9STRA	1.910e-11	40.57	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A197JBM8_9FUNG	2.230e-10	34.75	TMF_TATA_bd domain-containing protein n=1 Tax=Linn...	[more]
A0A397SER6_9GLOM	2.930e-9	39.42	TATA element modulatory factor 1 TATA binding-doma...	[more]
A0A7S2SPH7_9STRA	8.960e-9	41.58	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A2G8KM58_STIJA	1.310e-7	36.19	Putative TATA element modulatory factor isoform X2...	[more]
A0A4D9CLU0_9STRA	7.390e-7	40.00	TMF_TATA_bd domain-containing protein n=1 Tax=Nann...	[more]

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