Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 303 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 153 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866375.0505795-UTR-A-nodosum_M_contig10155:15702..15766 | 1680866375.0505795-UTR-A-nodosum_M_contig10155:15702..15766 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig10155 15703..15766 - |
| 1680866375.0844474-UTR-A-nodosum_M_contig10155:15964..16050 | 1680866375.0844474-UTR-A-nodosum_M_contig10155:15964..16050 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig10155 15965..16050 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866375.0614457-CDS-A-nodosum_M_contig10155:15766..15778 | 1680866375.0614457-CDS-A-nodosum_M_contig10155:15766..15778 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10155 15767..15778 - |
| 1680866375.0755982-CDS-A-nodosum_M_contig10155:15823..15964 | 1680866375.0755982-CDS-A-nodosum_M_contig10155:15823..15964 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10155 15824..15964 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10155.1.1 >prot_A-nodosum_M_contig10155.1.1 ID=prot_A-nodosum_M_contig10155.1.1|Name=mRNA_A-nodosum_M_contig10155.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=51bp
MGRLRRSPPSRGDEDYGPSTCLARVGESVRVASWRSRMNRSIDRILYWEQ
* back to topmRNA from alignment at A-nodosum_M_contig10155:15703..16050- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig10155.1.1 ID=mRNA_A-nodosum_M_contig10155.1.1|Name=mRNA_A-nodosum_M_contig10155.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=348bp|location=Sequence derived from alignment at A-nodosum_M_contig10155:15703..16050- (Ascophyllum nodosum dioecious)
AGCCGCCGAGTCCACCGAAGCATGAACGATTTGTAAGGCCTCCCATGCGT
GTGCATCACCCGCCCGCCGAAGTGAGTTCGCGCTGAATGGGCCGTTTACG
GAGGTCCCCTCCTTCGAGAGGGGATGAAGATTACGGTCCGTCCACGTGTC
TTGCGAGGGTGGGAGAATCTGTCCGCGTGGCGTCTTGGAGATCACGAATG
AATCGATCGATCGATCGAATCTTATACGTAATGTTAACCGCATCAGGTCC
GGACATTTTGGAACTGGAATAGTGGGAACAATAGGGTACGTTGTTCTCCC
GACTGGAGTGTCTACCGATGTATCGAGAGATATTGTATGACCCCCAGA back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig10155:15703..16050- >mRNA_A-nodosum_M_contig10155.1.1 ID=mRNA_A-nodosum_M_contig10155.1.1|Name=mRNA_A-nodosum_M_contig10155.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=153bp|location=Sequence derived from alignment at A-nodosum_M_contig10155:15703..16050- (Ascophyllum nodosum dioecious)
ATGGGCCGTTTACGGAGGTCCCCTCCTTCGAGAGGGGATGAAGATTACGG
TCCGTCCACGTGTCTTGCGAGGGTGGGAGAATCTGTCCGCGTGGCGTCTT
GGAGATCACGAATGAATCGATCGATCGATCGAATCTTATACTGGGAACAA
TAG back to top
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