mRNA_A-nodosum_M_contig1015.12.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: D7FNX7_ECTSI (TatD DNase domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX7_ECTSI)

HSP 1 Score: 378 bits (970), Expect = 1.770e-126
Identity = 192/269 (71.38%), Postives = 219/269 (81.41%), Query Frame = 2

Query:   47 MFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQH--RIRLHPSLGLHPEKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLFSRAFLR 847
            MFDCHAHLTD SL + L + L+EAEAAGV GIV VSESLDDA  VVELCA +N D     ++RLHPS+G+HPEKADL  ++ +LELID HAD I CVGEVGLD+SRHLIGE+G E AERAKEVQR+ F +QARRA ELGL VNVHSRSAGHHAI LLQ+EG+ RAV HAFDGKPKYAV+AAKAGYFFSVPPIVCRS GFQSLV+A+PLESL+LETDSPAL P K   N P NL+++ +W+A LK VP   V E T +NARRLF RAF R
Sbjct:    1 MFDCHAHLTDSSLAEGLQQTLLEAEAAGVTGIVAVSESLDDATPVVELCASINDDASRCRKLRLHPSIGMHPEKADLHKVDDVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSISRDWIASLKGVPADVVAETTTANARRLFPRAFDR 269

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BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: A0A6H5KIS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS3_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 4.940e-119
Identity = 192/297 (64.65%), Postives = 219/297 (73.74%), Query Frame = 2

Query:   47 MFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQH--RIRLHPSLGLHPEKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPK----------------------------YAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLFSRAFLR 847
            MFDCHAHLTD SL + L + L+EAEAAGV GIV VSESLDDA  VVELCA +N D     ++RLHPS+G+HPEKAD+  ++ +LELID HAD I CVGEVGLD+SRHLIGE+G E AERAKEVQR+ F +QARRA ELGL VNVHSRSAGHHAI LLQ+EG+ RAV HAFDGKPK                            YAV+AAKAGYFFSVPPIVCRS GFQSLV+A+PLESL+LETDSPAL P K   N P NL+V+ +W+A LK VP   V E T +NARRLF RAF R
Sbjct:   46 MFDCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVVELCASINDDASRCRKLRLHPSIGMHPEKADVHKVDDVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKDNGLITAEIQQTFRVQEYLATAGGEKERYAVQAAKAGYFFSVPPIVCRSSGFQSLVKALPLESLVLETDSPALGPEKGVGNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPRAFDR 342

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BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: A0A7S2UWP9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP9_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.890e-68
Identity = 123/263 (46.77%), Postives = 177/263 (67.30%), Query Frame = 2

Query:   47 MFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHPEKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEA-AKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLFS 832
            +FDCHAH+TD    + L+  L    A GV+G+V VS  + D+ +V++L ++          + PS+GLHPE A+++ L  ++  I  + D +A VGEVGLDYS H++GE   EA ER K +QR+ F++Q  +A EL LP+NVHSR+AGHH + LL++ G  R V HAFDG+  YA  A +++GY+FSVPP + RS   Q LV+ +PL+ LLLE+DSPALAPVK E N P N+ V+CE +A++K V V +V  +T +NA +L +
Sbjct:   16 VFDCHAHMTDTEFSNDLENVLEMCNATGVQGLVCVSSGVHDSEKVLQLGSK-------HPSVIPSVGLHPEFANISDLPTIITQITQYHDQLASVGEVGLDYSPHILGEG--EAEER-KAIQREVFSQQVLKAVELDLPLNVHSRAAGHHTLDLLRELGATRVVMHAFDGRAHYAERAVSESGYYFSVPPCIVRSPQLQKLVRRLPLDHLLLESDSPALAPVKGERNCPSNIIVSCEEIAKIKQVSVQEVAAITYANAMKLLN 268

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BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: A0A0T6A292_9BACT (TATDN3, TatD DNase domain containing 3, TatD DNase family protein n=1 Tax=candidate division NC10 bacterium CSP1-5 TaxID=1640516 RepID=A0A0T6A292_9BACT)

HSP 1 Score: 220 bits (560), Expect = 5.410e-65
Identity = 121/266 (45.49%), Postives = 162/266 (60.90%), Query Frame = 2

Query:   44 KMFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHPEKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLFSRAF 841
            ++ D HAH++D +    L+  L  A  AGV GIV VSE+LDDA  V+EL  R          L P  GL+P+  DL A E M+  I AH D +  +GEVGLD+   ++ E          EVQ Q  AK    ++EL LP+N+HSRSAG H +R LQ  G ++ + HAFDGK   A+E  +AGY+FS+PP V RSR  Q L++ +PL+ L+LETDSP L P  A  NEP+N+ V+C+ +A  K V + +V  VT  NARRLF +AF
Sbjct:    2 ELIDAHAHMSDRAFGTDLETVLQAAAEAGVVGIVTVSENLDDARTVLELAERFPL-------LKPCAGLYPDVLDLEAAEAMVAFIRAHEDRVVGIGEVGLDH--WVVKETN------GWEVQEQALAKFVALSEELDLPLNIHSRSAGGHTVRFLQQHGARKVLLHAFDGKASAALEGIEAGYYFSIPPSVVRSRQKQKLLERLPLDRLILETDSPVLGPDPAARNEPRNVLVSCQAIAAAKGVSIEEVARVTTENARRLFPKAF 252

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BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: A0A7C2EBA5_9BACT (TatD family deoxyribonuclease n=1 Tax=candidate division NC10 bacterium TaxID=2072417 RepID=A0A7C2EBA5_9BACT)

HSP 1 Score: 218 bits (554), Expect = 5.740e-64
Identity = 126/266 (47.37%), Postives = 158/266 (59.40%), Query Frame = 2

Query:   44 KMFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHPEKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLFSRAF 841
            ++FD HAHLT       L   L  AEAAGVRGIV VSE+  +A + + L  R      H + + P+ GL+P   D  A EG+   I  HAD +  +GEVGLD+         T  AE   +VQ +  A+    + EL LP+NVHSRSAG H I  L++ G +R + HAFDGK   A+E  +AGYFFS+PP V RS   Q L + VPLE LLLETDSP L P  A  NEP+N+TVAC  VA LK +   +V  +T  NARRLF RAF
Sbjct:   19 ELFDAHAHLTSADFAQDLPGVLARAEAAGVRGIVAVSETQAEAERALALSRR------HPL-VKPAAGLYPTVLDREAAEGLATFIRQHADRLVALGEVGLDH--------WTVKAEADWKVQEEILARFVTLSTELDLPLNVHSRSAGRHTIAFLRERGARRVLMHAFDGKASAALEGVRAGYFFSIPPSVVRSAQKQKLARQVPLECLLLETDSPVLGPDPAVRNEPQNVTVACRAVADLKGIAPDEVARITTENARRLFPRAF 269

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BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: UPI0018653474 (tatD DNase domain containing 3-like isoform X1 n=2 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018653474)

HSP 1 Score: 214 bits (546), Expect = 8.820e-63
Identity = 110/264 (41.67%), Postives = 167/264 (63.26%), Query Frame = 2

Query:   47 MFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHPEK---ADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLF 829
              DCH H++     + +++ + +++  G+ G+V V+E   +  ++++L  R        + +HP  G+ PE    A L  L+  L LI+ H D +  +GEVGLD++   +      ++++ KE QR+   +QA  A  L LP+NVHSRSAG   I LL+++GV++A+ HAFDGKP  A+E  KAGY+FS+PP + RS   Q LV+ +PLES+ LETDSPAL P K   NEP+N+TV+ E++A++K VP+  V+EVT  NA RLF
Sbjct:    4 FIDCHCHISATEFDNDIEDVIEKSKQVGILGLVAVAEHAGEFEKIIQLSERFPGFVFPCLGVHPVQGVPPEPQRGATLEDLDAALPLIEKHKDRLLAIGEVGLDFTPRFL------SSDKGKEEQREVLIRQAEIAKRLDLPLNVHSRSAGRPTIHLLKEQGVEKALLHAFDGKPSVAIEGVKAGYYFSIPPSIVRSEQKQKLVKQLPLESICLETDSPALGPEKQVRNEPRNITVSAEFIAKVKGVPLEQVIEVTTRNALRLF 261

[Close]

BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: A0A1Y1VVX4_9FUNG (Mg-dependent DNase n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1VVX4_9FUNG)

HSP 1 Score: 214 bits (546), Expect = 1.130e-62
Identity = 116/281 (41.28%), Postives = 167/281 (59.43%), Query Frame = 2

Query:   38 ASKMFDCHAHLTDPSLRDRLDERLV-EAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHP----------------EKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLF 829
            ++  FDCHAH+  PS      E +V +A+   V+GI+ V+E+ +D L V+      N   Q+   + P +GLHP                  + L  +  +L+LI  H  +I C+GEVGLDYS   +     +  E  K +Q+Q F KQ   A+EL +P+NVHSRSAGH+AI  L ++  K  V HAFDGKP YA +  +AG++FS+PP + RS   Q LV  +PL+ +LLETDSPAL+P K   NEP N+ ++CE +AR+KN+ + +V  +TN NA +LF
Sbjct:    2 SNTFFDCHAHINSPSFSKENIEIIVNKAKEKNVKGIISVAETYEDCLDVL------NVAKQYSKIILPGIGLHPIQPLVDENGQRLDKGGRSSTLDEVYPVLDLIKEHQKEIVCIGEVGLDYSPQFL-----KNVEEEKIIQKQIFEKQIELANELNIPLNVHSRSAGHYAIETLIEKNAKNVVLHAFDGKPGYAQKGLQAGFYFSIPPSIKRSPQKQKLVNILPLDRILLETDSPALSPEKNTINEPSNVIISCEEIARIKNISIEEVARITNENALKLF 271

[Close]

BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: UPI001ABE454F (putative deoxyribonuclease TATDN3 isoform X1 n=6 Tax=Bufo TaxID=8383 RepID=UPI001ABE454F)

HSP 1 Score: 214 bits (546), Expect = 1.570e-62
Identity = 121/272 (44.49%), Postives = 167/272 (61.40%), Query Frame = 2

Query:   47 MFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHP---------EKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLFSR 835
              DCH HL+       +D  L EA+AAGV+ +V V+E   +  +V++L  R    P+    + P LG+HP           A+L  LE  L LI+ + DD+  +GEVGLD++  +   A T+     KE QRQ F +Q + A +LGLP+NVHSRSAG   I LL+++G +  + HAFDGKP  A+E  KAGY+FS+PP + RS   Q LV+ +PLE+L LETDSPAL P K   NEPKN+T A E++A++K + + +V  VT  NA RLF R
Sbjct:   23 FVDCHCHLSAAEFSHDIDNVLDEAKAAGVQALVAVAEHSAEFEKVIQLSRRY---PE---LVFPCLGVHPVQASNAEQQRSANLKDLEDALPLIEHYKDDLLAIGEVGLDFTPRI---ANTDDQ---KEEQRQVFIRQIQLAKQLGLPLNVHSRSAGRPTINLLKEQGAEHVLLHAFDGKPSVAMEGVKAGYYFSIPPSIIRSEQKQKLVKQLPLENLCLETDSPALGPEKQIRNEPKNITYAAEYIAKVKGISLEEVTRVTTENALRLFPR 282

[Close]

BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: A0A1Y3N0C6_PIRSE (Uncharacterized protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3N0C6_PIRSE)

HSP 1 Score: 213 bits (543), Expect = 3.040e-62
Identity = 113/280 (40.36%), Postives = 168/280 (60.00%), Query Frame = 2

Query:   41 SKMFDCHAHLTDPSL-RDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHP----------------EKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLF 829
            +  FDCHAH+  PS  ++ + + + +A+   V+GI+ V+E+ +D L V+      N   Q+   + P LGLHP                  + L  +  +L+LI  H D+I C+GEVGLDYS   +     +  E  KE+Q+Q F KQ   A+E  +P+NVHSRSAGH+AI  L  +  K  + HAFDGKP YA++  +AGY+FS+PP + RS   Q LV+ +PL+ ++LETDSPAL+P K   NE  N+ ++CE +A++K + V +V  +TN NA +LF
Sbjct:    2 ASYFDCHAHINSPSFSKEAISDLVKKAQEKNVKGIISVTETYEDCLDVL------NVVMQYPNIILPGLGLHPIQPLVDENGQRLDKGGRSSTLDEVYPILDLIKEHKDEIVCIGEVGLDYSPQFL-----KNVEEEKEIQKQIFQKQIELANEYNIPLNVHSRSAGHYAIETLISKNAKNVLLHAFDGKPGYALKGLQAGYYFSIPPSIRRSPQKQKLVKNLPLDRIILETDSPALSPEKNTINESSNVVISCEEIAKIKGISVEEVARITNENAIKLF 270

[Close]

BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: I2CPC6_NANGC (Dnase domain containing 3 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CPC6_NANGC)

HSP 1 Score: 214 bits (544), Expect = 3.110e-62
Identity = 133/290 (45.86%), Postives = 166/290 (57.24%), Query Frame = 2

Query:   47 MFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHPEKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQD--------------------------EGVKRAVFHAFDGKPKYAVEAA---KAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLF 829
            MFD HAHLT   L   LD  L EA + GVR IVVVSE++ DA  V+ L     C  Q+ +RLH SLGLHPE A L +L  +L LI  +   +ACVGE+GLD+S H++G    EA    K +QR+C  +Q   A EL LPVNVHSR AGHHA+ LL++                          EG  RAV HA+DGK KYA  AA   +   +FSVPP   RS      ++ +PLESLLLETD PALA VK E N P+NL ++ + +   K V +  V E+T  NA  LF
Sbjct:    1 MFDVHAHLTAQELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPP---C--QNGVRLHKSLGLHPEHACLKSLSTVLNLIRENHTKLACVGEIGLDFSPHILGHDDAEAV---KALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELF 282

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7FNX7_ECTSI	1.770e-126	71.38	TatD DNase domain containing 3 n=1 Tax=Ectocarpus ...	[more]
A0A6H5KIS3_9PHAE	4.940e-119	64.65	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S2UWP9_9STRA	1.890e-68	46.77	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A0T6A292_9BACT	5.410e-65	45.49	TATDN3, TatD DNase domain containing 3, TatD DNase...	[more]
A0A7C2EBA5_9BACT	5.740e-64	47.37	TatD family deoxyribonuclease n=1 Tax=candidate di...	[more]
UPI0018653474	8.820e-63	41.67	tatD DNase domain containing 3-like isoform X1 n=2...	[more]
A0A1Y1VVX4_9FUNG	1.130e-62	41.28	Mg-dependent DNase n=1 Tax=Anaeromyces robustus Ta...	[more]
UPI001ABE454F	1.570e-62	44.49	putative deoxyribonuclease TATDN3 isoform X1 n=6 T...	[more]
A0A1Y3N0C6_PIRSE	3.040e-62	40.36	Uncharacterized protein n=1 Tax=Piromyces sp. (str...	[more]
I2CPC6_NANGC	3.110e-62	45.86	Dnase domain containing 3 n=3 Tax=Monodopsidaceae ...	[more]

Pages

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7FNX7
Preferred name	TATDN3
PFAMs	TatD_DNase
Model size	1481
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K03424
Hectar predicted targeting category	other localisation
Exons	5
Evalue	2.41e-130
EggNOG OGs	COG0084@1\|root,KOG3020@2759\|Eukaryota
Description	hydrolase activity, acting on ester bonds
Cds size	804
COG category	L
BRITE	ko00000,ko01000

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at A-nodosum_M_contig1015:90522..97675-
coding sequence from alignment at A-nodosum_M_contig1015:90522..97675-

protein sequence of mRNA_A-nodosum_M_contig1015.12.1

>prot_A-nodosum_M_contig1015.12.1 ID=prot_A-nodosum_M_contig1015.12.1|Name=mRNA_A-nodosum_M_contig1015.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=268bp
MFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCA
RVNCDPQHRIRLHPSLGLHPEKADLAALEGMLELIDAHADDIACVGEVGL
DYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHH
AIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSL
VQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVV
EVTNSNARRLFSRAFLR*

mRNA from alignment at A-nodosum_M_contig1015:90522..97675-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_A-nodosum_M_contig1015.12.1 ID=mRNA_A-nodosum_M_contig1015.12.1|Name=mRNA_A-nodosum_M_contig1015.12.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7154bp|location=Sequence derived from alignment at A-nodosum_M_contig1015:90522..97675- (Ascophyllum nodosum dioecious)
GGCAGCAGGTCAAAGTACGAGGGGCGAAGAGCGCGCAGCCTCAAAAATGT
TCGATTGCCACGCGCACCTGACGGATCCTTCCCTGCGGGATAGATTAGAT
GAACGTTTGGTAGAGGCCGAGGCAGCCGGCGTGAGGGGTATTGTTGTGGT
GTCTGAATCTCTCGATGATGCCTTGCAGGTAAGTAGTCTTCCGTAATCTT
CATCTTTACATGGAGAACGATTAATTCGTTAGTACACAAAATTCGACTTC
ACGGTCGACGAGGGAAAGGAATGGCTGAATCCTTCTCGCGACAAAAATCA
AGGCACGCACCGCAGAAGGAAGGTGGATTAAAAATCCTGTGTGACCTTCC
TCCTGTGTGACCCCGGCTGGTACGTCCAACGAACTTGATGTCCAGAATGG
ATGGGAAGAAAACACAAACACACAACACAGTAAATGTAGCCTACTCCTGT
ATTTTGCAATGAAGACCACTATACATAATTTTTGTGCCGGTCGCTCCGGT
GGTTTGGTTGGTAACCTCGAAACCTTCTGACGTTGGGACGTGAGTTCGAA
TCTCGATGCAGTCACACGAACTGGGATTTTTCCTCACAAAAAAAAGAAAG
AAAAGAAGAAGAAGAAAAAAACAAAAGAAAAGCCCAACAAGTGGAGAACG
ATAAATCGTTGGTACACAAAATTCGACTTCGCGGTCGACGAGGGAAAGGA
TCGGCCGAATCCTTCTCGCTAGAAAAAATTAAGGCAAGCACCGCAGAAGG
AAGGTGGATGAGGAATCCTGTGTGACCTTCCTCCTGTGTGACCGGCTGGT
TCGTCCACCAACCTGACGTCCAGAATAAATGGGATGCCAGCACACAGACA
CACAATACAGTGTGAGCAGACTGCTTACTGAACTTTAGTGCGACACGTGT
GTGTGTTTTTGCCGCCCTATTCTTCCTTCATTTCCACTCTATAACACTAT
GGTTTTGATCGACTGATTGAAATCTCACATTGTACTTTCAACATGCCCAC
TTCAAACCAATAGTGGGTGTGGGAAAGAGAGGCATATTAATTGGTCCATG
GTGACTTGCCAAGGCAGCAGCCGTTTGGAACTGCCTTGAGGTTTATTGGC
CCTGTGCCGGCGTACTCTCGGCAGCGAACGCCATCGATACGCAATTGCGT
GACCCGATAAACTCGGGACTGACCCGATGGCGTCTGGAGGTTTAAATAAA
TAAATGGACGCCGCCGCGGAAATCGGGAGGAATTCCGTAAGTAAGCACCA
GATTCAGCCTGAGTATGGAGATGAACAGGCTGACGCGGGCCGGGACTGCC
GAACCCATCTCGTGAGACCAAACTCTCTGGCGCGAACGGGGACAGGGAAA
ATTCTAGGGCTCTTCTCGGTAACGATTTTTGAGGTTGGTAACATTTACCG
CGGTATTCAGACATCACGGTAATGCACGGTATTTTTGGATGGTAATCGGC
CACTCTGGTATACATACTACCGTGGTGCTCAGCCCCCACGGTAATGCACG
GTATTTCTTGGATGGTAATCGGCCACTCTGGTACATTTTACTGCGGTATT
CAGCCACCACGGTAGGTAATGTATGGTATATTTTATATTTTATATTTTTT
GGGGTTTCTCCCGCGTGCGTGTGGTGTTGCGATGCCAGTACGGTCACAGA
ACACGAAAATCACCAGACCTCGAACTTAAATATGAAGTACTGTACAGATC
TCCGGAGAACACAATAAAAGGCAGTGTCCAGATCACAATAAAAGGCAGAC
ATTCGCAGCCAACAGACAACGATCACAAGCAAGAGCTACGCCCCCCGATA
TCAACTGCTTCATCACCAGACCAAATCCGTTAAAGAACCTTCCTCCCCCT
TACAAACTACGGTTTCGTACGGTATATTATTGTCACATGGACACAAGTCC
ACAGCAACTTCTGCAAAACGGCAGTTCAACACATCCGTACTGTACACCAC
AAAATTACAGATTCATAGGTTCAAGACAAGAGCGACCAAACTCTTCACCA
TCTTAGAGTCAAGGGCATTGCGAACGATTCACCATTGCCCCCCCCACTTG
CGCAACTTTCTCTTTGCACCGAGCTGCCGCTGCTTTGTTGGCTTCGATGG
CGTCGTGGAGAGCCTTGACCTGCGGGAACGACACCCATTGTAATGGCCTA
GTCGACTGGGCCGATGGGTGTTACCAACCTCGAAAATCGTTACCGAGAAG
AACCCTGGAATTTTGTGTACTACGTAACGATTTAATCTATGAAACAACAG
TTTCGCTGTACACGTTTTAGAATATCTCTGTGGACTCGTTGTAAAGTGTA
AATATTTTCGCAGTACAAGCATAGCTACATGTAACACGTAGTATGAAATC
GAAACACGTACTGAATATAAAGCATGGTAAAAAATGTATTTGTACATAAC
GTTATATTGTACAGTATACAATAACTTCATGTTGTAATATAGATTATCTT
ATATTATTACATTGGTACTAAACTGTATTATCACTGTACGTACTTGTGGC
TCCCAACAGAAAAAGAAAGTTCGCCAAACTCTTCTTCTACCATCTGCTGC
AAACTGAGCTCCGCCGCCTCCTCGCCGACCGCCCAGAAGTGGGCTTGATG
CCGTCTTCTGTCCAAGTGCAGTTGCCGGTGTCTGTGCATCGGCTGACTTG
TGCGACACTATGCTCGTTCTCTTCTTTGCTCAGGGCGCCAAAGCTTACTC
GCCTGGGTATTTTTTCGTGCCTTCTTCGAAACTCTTCCTCATCTCCCGAC
ATTACGCAAACATTCGTCGTTGGTGCTATGGAGTGGCTCCGTGGTGGATG
ATATCAGAGACTTTGTAGCCACGTGTTGGTAATTTTTTCTCTTATTTTTT
AGTGAGGAAAAATCCCAGTTACCGGGATTCGAACTCACGTCTTAACGTGT
CAGAAGGTTACGAGGTTACCAACTGAGCTACCGGGAAAAAAAAGGAAAGA
AAAAGAGAAAAAGAGCAATAGAAAAAAAATAAAAAAATAAAAGAAAAACA
CTTGACGGTCGTTGACCCAGAGACTCTGTTCATGCGCAACTCTAAACTAA
TATATTGGTAGTTGACCCAGAGACTTTTTAAAGAAAAATCGGAATGCACC
TAGACCTTCTGAGCATCCCCCGGTTAGGGGGGAAAACAGGTCAAAACGTT
TAGGTGGGGTCAAAGGCTGCAAATACAAAACCTCTTCATGGCATTTAAAC
GGGTTCCCCTATGGTGGTACCATTGGGTTTACAGTATAATATCGGGGAGA
AGCCCGCCGTTATACTGTACTCTTACATTAATCGCCATGCAGGGACACCA
GAAAAACAGCAAAGACAAAACAGTTGTTGTTGTGTTTGACATCATCAAAC
AATAAAGACCAATCCAATACCATCATTGCAACGAGAACAGAGGACCATGA
TGATGTAGAATCTTCATACCATGTACACGACCCCGTTATTCACCTGGAAG
TAGACGAAGAGCAGTATGCATAGGCGATCACACAAGGCGGTAAGAGGCAA
GCGGAAAGAACTAGGTTCCTCGCTCCATACTTGTCAGGGCTACGACACAC
AGATGCTCCTCATGCATGGACTTAGCTATGGTCCCGCGTTGACCAGAAAC
ACAAAGGAAAGAGCATCTGTCTGTCAAAGTGACCAAGTAGGCCTCAGGCC
ACCTCGTGTAACCTCCCATACGATCCTGACCCGAACTATCTTCAGCTCCA
TGTCTTTTATTCCGAACTGTCGTGCCGAATATCATCAGTTCCTTGAATCT
TCTTGCAGAACGTACACCAGCTCCATTTTATCAATCGTTTCTCCAATCTT
CTTGCAGAGCGGGACTGTATGATTGTACTTTGGTTTCAGTAAAAATGATC
TAATTAGCTAGTCAGGAAAAACGATTGTCTCAGGCACTTGACAATATTTT
TTCATGATCTAGATAGGGGTTTTTTATACAGGATAATAAAGAAGAACACA
TAACCTTGTTCATGCGCAACTCTAAACTAATCTATTGCCCCACCGACATG
CATTGCGTAATACCGAAATTTCAGTAATAGATGTGTAACACAGTAACAGT
AATTGGTAGTTTGATATTTTCGCGGTAACAGTTACCATGATATCGAGATA
TCACGGAAATTTCAATATTTGCGTGGTGACGTTTTGGATGGGAACGGAAT
AATGCAATTTCTTTGGTAACGGTTAAGATGGGATTGGTAATTCCTATTTC
TCACGGTAACCTACGAATCACCAATTACCGGGGAAAATGCCGCGGTATTT
TACCGTGGTAATTTTACGGAGAAGAGCCCTGGAAAATTTAGACGGGGACA
GGGAAAAAAACATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAAC
CTTACCCGGTTGATCCATACTCTTGCAATATGTGATGACGATACATACAT
ACATACATAAGCTGAAGTAAAAAAATCCAGCCCGTCGTCACAAGGTAGAA
AAACACCATCCGGAAGGAAAAAACGTACGACGTACTCTCCATACAAAGAG
AAAACTGCAATATAGCTATACAACTGATTTATCTTGTCCCCGCTTTCACG
AACGGTCTCCATATCTCTAGGTGGTGGAGTTGTGCGCGCGCGTCAACTGC
GACCCGCAGCACAGGATACGCCTGCACCCGTCTCTCGGCTTGCACCCAGA
GAAGGCTGATCTGGCAGCTCTCGAGGGCATGCTGGAACTGATCGACGCTC
ACGCGGACGATATAGCCTGCGTCGGCGAGGTGGGACTAGACTATAGTCGC
CACCTGATCGGAGAGGCCGGGACGGAGGCGGCCGAGAGGGCGAAGGAGGT
GCAGCGGCAGTGCTTCGCCAAGCAGGCTCGTCGAGCAGATGTGGGTCGGT
GTTTCACGTTTTAGAGCCAGGCCTATTTTTTTTTTTGACACAGCGGCGAT
GCGTGGTGCTCCATTTTGTCGAGATTCCCAGAACTTTTTGGAAACCTCGG
GTGCTGTACTCCCTGAACTTTTCCGGGGCGCGTGTTCTCTGACTCGATCC
TTCATCGGAGTGCACCTGACTGATCATTGATCCGACGGCACGCGTACGCG
GATCGAAGGAGCTGGGGCTTCCAGTGAACGTGCACAGCCGCTCGGCGGGA
CATCACGCCATACGACTCCTGCAAGATGAAGGCGTCAAACGTGCAGTCTT
CCATGCCTTCGACGGAAAGCCCAAGTGAGTACAACTGAGCGACTTGGTCG
GACCTCGCCGCCAACCCGCTTCCGTCCACCTCCGCCCCCCCCCCCCCGCC
TCGAGCCTAGTTATGATAATTCGCTTCTTTCCCAAATGTAGAGAGAGTAC
GATGGATACGGCGACATCTGAACTTTCTGGGCGAAAATAATCGCGACGCT
GCTTTTTCACCGGAGCGCTATGCGAACTTTCAGCAGAACACAGAACGTGA
TGCGTTTGTGAAGATCCGTCAGCGATCGAATCTCTTCAATTTTTCGATCA
ATCCATATTAATAGCATTCGTGCGAAGCTGCCCATTTTTACCCATAAATT
TGAGTGGGGGGCGGGTAGGTATCGTTAGCTTGCTCCCGCATCCTTTCGAT
AGATCTACGCAGGCGTATACCGCGCTACCCCCGGTCGCTCAAGGAAATGA
AGGGGCTCATAATAATGCATCAAGGAACAGAGGCATGAGGTTTCCGTCGA
GCACCGGATCGAGCGCGATCTCCCCGCGGAGAGACGGTAGTCGGGAGACA
CCTCGGACGATGCCGTGCCCCTTACACCCACCCCGCGACGGATACGCGGC
AGGTACGCGGTGGAGGCGGCAAAAGCGGGATACTTCTTCTCGGTCCCCCC
GATCGTCTGCCGCTCACGAGGTTTCCAAAGTCTCGTGCAGGCGGTTCCTT
TGGAGTCGCTGCTGCTTGAGACCGATTCGCCGGCGTTGGTGAGTGAGAGC
CTTGTGCCCGTCATGCTGTTGCCAGTCAGGCGCAGAGGGCGCAGGTAATT
GATCTTTATGTAGAACGCTTCATTTTAAAAGTTTCAATGATAAATTATTT
TTAGCCTTGAGGTGGAATCGCGGATATCTGAACTTGGCCAACCCGCGAAC
CACACTATTAAATAGTATCTAAGTTATAGATCGCCCGCGAAGGGGAGAAT
CTTCGTGGACTGGGTAATGAGGTGGAGTAAAACAGAGTTCATCAACCGAG
CTACTTTCCCCTCATAGTGTCGCTTCTTATCTTGAAGAAAACCGTTGGCT
CTTGGTTTGCCTGCTCTGCTGGTAACCGTAGTTTCCACGTGTCCTCAACT
CTTGCGACCGTTGACTGCGCGCATCTATGCGCGCGCTCTGCGTCAAGTTC
CGCCCAACCCAGCGTGCGCTCTTTTGCTTCAATAGCGAAAGAAACAGAGG
AAATGCTAATGCTTGAACCACAGGCCCCCGTGAAAGCGGAGACGAACGAG
CCGAAGAACCTCACCGTCGCGTGTGAATGGGTCGCGAGGTTGAAGAACGT
TCCCGTTGCCGACGTCGTCGAGGTCACCAATTCCAATGCTCGCCGACTTT
TCTCACGCGCCTTCCTGAGATAGCAGCATTCGTTCGCACCAGCGACAAGG
GAGGCGCGGAAATAGCGACAGCAAAAAAGAGACGGCATGGTTTTTGTACG
ACTAAGGGTTTATGACGACGAACGAGCGGTTTTGCGACCGAAATGCGTGG
GAGCCGAGTAGCTTGTTGCGTATAAAGAAACCTGTATGGACTTGGTTTCT
TTAGCGATCCAAAGAGGTGGGTGGCCCAAAGTTCGACGATGACACGGGGC
CTTACAAGCGGGAAGGGACGTTGAATACCCGGCTTACTTTCAGCGGACAC
GAGCTCCTGGGGTGTCCCATGCAGGCCCGGCTACAAAAAGTATACGGGAG
TGTTAAGCTAGCGACGGTTATAAACGGGACGGGTGATGATTGCTCCCTTG
TGCTCCCGCACCCCCCCCGGCGAAAGCCATACTAAACCCCGGTGGGATAT
CCCTGCTGGAGGCGTTTACGCTCACCCGGGGAGCGATCAAAGCACCTTAG
ATAGAGAGATCTTCGGCCGTGTCGTGTAGGTACGGAAACATATGCCGTGG
ATATAGAAGGATAAAGGTATTACCGTACTGTAATCCAGCATATTATTAGT
ATATTAATCGTAATAGTAAGAAGTACCGCACGTACAGTACCTGGCAACCC
GTGA

Coding sequence (CDS) from alignment at A-nodosum_M_contig1015:90522..97675-

>mRNA_A-nodosum_M_contig1015.12.1 ID=mRNA_A-nodosum_M_contig1015.12.1|Name=mRNA_A-nodosum_M_contig1015.12.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at A-nodosum_M_contig1015:90522..97675- (Ascophyllum nodosum dioecious)
ATGTTCGATTGCCACGCGCACCTGACGGATCCTTCCCTGCGGGATAGATT
AGATGAACGTTTGGTAGAGGCCGAGGCAGCCGGCGTGAGGGGTATTGTTG
TGGTGTCTGAATCTCTCGATGATGCCTTGCAGGTGGTGGAGTTGTGCGCG
CGCGTCAACTGCGACCCGCAGCACAGGATACGCCTGCACCCGTCTCTCGG
CTTGCACCCAGAGAAGGCTGATCTGGCAGCTCTCGAGGGCATGCTGGAAC
TGATCGACGCTCACGCGGACGATATAGCCTGCGTCGGCGAGGTGGGACTA
GACTATAGTCGCCACCTGATCGGAGAGGCCGGGACGGAGGCGGCCGAGAG
GGCGAAGGAGGTGCAGCGGCAGTGCTTCGCCAAGCAGGCTCGTCGAGCAG
ATGAGCTGGGGCTTCCAGTGAACGTGCACAGCCGCTCGGCGGGACATCAC
GCCATACGACTCCTGCAAGATGAAGGCGTCAAACGTGCAGTCTTCCATGC
CTTCGACGGAAAGCCCAAGTACGCGGTGGAGGCGGCAAAAGCGGGATACT
TCTTCTCGGTCCCCCCGATCGTCTGCCGCTCACGAGGTTTCCAAAGTCTC
GTGCAGGCGGTTCCTTTGGAGTCGCTGCTGCTTGAGACCGATTCGCCGGC
GTTGGCCCCCGTGAAAGCGGAGACGAACGAGCCGAAGAACCTCACCGTCG
CGTGTGAATGGGTCGCGAGGTTGAAGAACGTTCCCGTTGCCGACGTCGTC
GAGGTCACCAATTCCAATGCTCGCCGACTTTTCTCACGCGCCTTCCTGAG
ATAG