mRNA_A-nodosum_M_contig1015.12.1 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: D7FNX7_ECTSI (TatD DNase domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX7_ECTSI) HSP 1 Score: 378 bits (970), Expect = 1.770e-126 Identity = 192/269 (71.38%), Postives = 219/269 (81.41%), Query Frame = 2 Query: 47 MFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQH--RIRLHPSLGLHPEKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLFSRAFLR 847 MFDCHAHLTD SL + L + L+EAEAAGV GIV VSESLDDA VVELCA +N D ++RLHPS+G+HPEKADL ++ +LELID HAD I CVGEVGLD+SRHLIGE+G E AERAKEVQR+ F +QARRA ELGL VNVHSRSAGHHAI LLQ+EG+ RAV HAFDGKPKYAV+AAKAGYFFSVPPIVCRS GFQSLV+A+PLESL+LETDSPAL P K N P NL+++ +W+A LK VP V E T +NARRLF RAF R Sbjct: 1 MFDCHAHLTDSSLAEGLQQTLLEAEAAGVTGIVAVSESLDDATPVVELCASINDDASRCRKLRLHPSIGMHPEKADLHKVDDVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSISRDWIASLKGVPADVVAETTTANARRLFPRAFDR 269
BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: A0A6H5KIS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS3_9PHAE) HSP 1 Score: 362 bits (928), Expect = 4.940e-119 Identity = 192/297 (64.65%), Postives = 219/297 (73.74%), Query Frame = 2 Query: 47 MFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQH--RIRLHPSLGLHPEKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPK----------------------------YAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLFSRAFLR 847 MFDCHAHLTD SL + L + L+EAEAAGV GIV VSESLDDA VVELCA +N D ++RLHPS+G+HPEKAD+ ++ +LELID HAD I CVGEVGLD+SRHLIGE+G E AERAKEVQR+ F +QARRA ELGL VNVHSRSAGHHAI LLQ+EG+ RAV HAFDGKPK YAV+AAKAGYFFSVPPIVCRS GFQSLV+A+PLESL+LETDSPAL P K N P NL+V+ +W+A LK VP V E T +NARRLF RAF R Sbjct: 46 MFDCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVVELCASINDDASRCRKLRLHPSIGMHPEKADVHKVDDVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKDNGLITAEIQQTFRVQEYLATAGGEKERYAVQAAKAGYFFSVPPIVCRSSGFQSLVKALPLESLVLETDSPALGPEKGVGNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPRAFDR 342
BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: A0A7S2UWP9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP9_9STRA) HSP 1 Score: 229 bits (585), Expect = 1.890e-68 Identity = 123/263 (46.77%), Postives = 177/263 (67.30%), Query Frame = 2 Query: 47 MFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHPEKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEA-AKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLFS 832 +FDCHAH+TD + L+ L A GV+G+V VS + D+ +V++L ++ + PS+GLHPE A+++ L ++ I + D +A VGEVGLDYS H++GE EA ER K +QR+ F++Q +A EL LP+NVHSR+AGHH + LL++ G R V HAFDG+ YA A +++GY+FSVPP + RS Q LV+ +PL+ LLLE+DSPALAPVK E N P N+ V+CE +A++K V V +V +T +NA +L + Sbjct: 16 VFDCHAHMTDTEFSNDLENVLEMCNATGVQGLVCVSSGVHDSEKVLQLGSK-------HPSVIPSVGLHPEFANISDLPTIITQITQYHDQLASVGEVGLDYSPHILGEG--EAEER-KAIQREVFSQQVLKAVELDLPLNVHSRAAGHHTLDLLRELGATRVVMHAFDGRAHYAERAVSESGYYFSVPPCIVRSPQLQKLVRRLPLDHLLLESDSPALAPVKGERNCPSNIIVSCEEIAKIKQVSVQEVAAITYANAMKLLN 268
BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: A0A0T6A292_9BACT (TATDN3, TatD DNase domain containing 3, TatD DNase family protein n=1 Tax=candidate division NC10 bacterium CSP1-5 TaxID=1640516 RepID=A0A0T6A292_9BACT) HSP 1 Score: 220 bits (560), Expect = 5.410e-65 Identity = 121/266 (45.49%), Postives = 162/266 (60.90%), Query Frame = 2 Query: 44 KMFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHPEKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLFSRAF 841 ++ D HAH++D + L+ L A AGV GIV VSE+LDDA V+EL R L P GL+P+ DL A E M+ I AH D + +GEVGLD+ ++ E EVQ Q AK ++EL LP+N+HSRSAG H +R LQ G ++ + HAFDGK A+E +AGY+FS+PP V RSR Q L++ +PL+ L+LETDSP L P A NEP+N+ V+C+ +A K V + +V VT NARRLF +AF Sbjct: 2 ELIDAHAHMSDRAFGTDLETVLQAAAEAGVVGIVTVSENLDDARTVLELAERFPL-------LKPCAGLYPDVLDLEAAEAMVAFIRAHEDRVVGIGEVGLDH--WVVKETN------GWEVQEQALAKFVALSEELDLPLNIHSRSAGGHTVRFLQQHGARKVLLHAFDGKASAALEGIEAGYYFSIPPSVVRSRQKQKLLERLPLDRLILETDSPVLGPDPAARNEPRNVLVSCQAIAAAKGVSIEEVARVTTENARRLFPKAF 252
BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: A0A7C2EBA5_9BACT (TatD family deoxyribonuclease n=1 Tax=candidate division NC10 bacterium TaxID=2072417 RepID=A0A7C2EBA5_9BACT) HSP 1 Score: 218 bits (554), Expect = 5.740e-64 Identity = 126/266 (47.37%), Postives = 158/266 (59.40%), Query Frame = 2 Query: 44 KMFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHPEKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLFSRAF 841 ++FD HAHLT L L AEAAGVRGIV VSE+ +A + + L R H + + P+ GL+P D A EG+ I HAD + +GEVGLD+ T AE +VQ + A+ + EL LP+NVHSRSAG H I L++ G +R + HAFDGK A+E +AGYFFS+PP V RS Q L + VPLE LLLETDSP L P A NEP+N+TVAC VA LK + +V +T NARRLF RAF Sbjct: 19 ELFDAHAHLTSADFAQDLPGVLARAEAAGVRGIVAVSETQAEAERALALSRR------HPL-VKPAAGLYPTVLDREAAEGLATFIRQHADRLVALGEVGLDH--------WTVKAEADWKVQEEILARFVTLSTELDLPLNVHSRSAGRHTIAFLRERGARRVLMHAFDGKASAALEGVRAGYFFSIPPSVVRSAQKQKLARQVPLECLLLETDSPVLGPDPAVRNEPQNVTVACRAVADLKGIAPDEVARITTENARRLFPRAF 269
BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: UPI0018653474 (tatD DNase domain containing 3-like isoform X1 n=2 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018653474) HSP 1 Score: 214 bits (546), Expect = 8.820e-63 Identity = 110/264 (41.67%), Postives = 167/264 (63.26%), Query Frame = 2 Query: 47 MFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHPEK---ADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLF 829 DCH H++ + +++ + +++ G+ G+V V+E + ++++L R + +HP G+ PE A L L+ L LI+ H D + +GEVGLD++ + ++++ KE QR+ +QA A L LP+NVHSRSAG I LL+++GV++A+ HAFDGKP A+E KAGY+FS+PP + RS Q LV+ +PLES+ LETDSPAL P K NEP+N+TV+ E++A++K VP+ V+EVT NA RLF Sbjct: 4 FIDCHCHISATEFDNDIEDVIEKSKQVGILGLVAVAEHAGEFEKIIQLSERFPGFVFPCLGVHPVQGVPPEPQRGATLEDLDAALPLIEKHKDRLLAIGEVGLDFTPRFL------SSDKGKEEQREVLIRQAEIAKRLDLPLNVHSRSAGRPTIHLLKEQGVEKALLHAFDGKPSVAIEGVKAGYYFSIPPSIVRSEQKQKLVKQLPLESICLETDSPALGPEKQVRNEPRNITVSAEFIAKVKGVPLEQVIEVTTRNALRLF 261
BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: A0A1Y1VVX4_9FUNG (Mg-dependent DNase n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1VVX4_9FUNG) HSP 1 Score: 214 bits (546), Expect = 1.130e-62 Identity = 116/281 (41.28%), Postives = 167/281 (59.43%), Query Frame = 2 Query: 38 ASKMFDCHAHLTDPSLRDRLDERLV-EAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHP----------------EKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLF 829 ++ FDCHAH+ PS E +V +A+ V+GI+ V+E+ +D L V+ N Q+ + P +GLHP + L + +L+LI H +I C+GEVGLDYS + + E K +Q+Q F KQ A+EL +P+NVHSRSAGH+AI L ++ K V HAFDGKP YA + +AG++FS+PP + RS Q LV +PL+ +LLETDSPAL+P K NEP N+ ++CE +AR+KN+ + +V +TN NA +LF Sbjct: 2 SNTFFDCHAHINSPSFSKENIEIIVNKAKEKNVKGIISVAETYEDCLDVL------NVAKQYSKIILPGIGLHPIQPLVDENGQRLDKGGRSSTLDEVYPVLDLIKEHQKEIVCIGEVGLDYSPQFL-----KNVEEEKIIQKQIFEKQIELANELNIPLNVHSRSAGHYAIETLIEKNAKNVVLHAFDGKPGYAQKGLQAGFYFSIPPSIKRSPQKQKLVNILPLDRILLETDSPALSPEKNTINEPSNVIISCEEIARIKNISIEEVARITNENALKLF 271
BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: UPI001ABE454F (putative deoxyribonuclease TATDN3 isoform X1 n=6 Tax=Bufo TaxID=8383 RepID=UPI001ABE454F) HSP 1 Score: 214 bits (546), Expect = 1.570e-62 Identity = 121/272 (44.49%), Postives = 167/272 (61.40%), Query Frame = 2 Query: 47 MFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHP---------EKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLFSR 835 DCH HL+ +D L EA+AAGV+ +V V+E + +V++L R P+ + P LG+HP A+L LE L LI+ + DD+ +GEVGLD++ + A T+ KE QRQ F +Q + A +LGLP+NVHSRSAG I LL+++G + + HAFDGKP A+E KAGY+FS+PP + RS Q LV+ +PLE+L LETDSPAL P K NEPKN+T A E++A++K + + +V VT NA RLF R Sbjct: 23 FVDCHCHLSAAEFSHDIDNVLDEAKAAGVQALVAVAEHSAEFEKVIQLSRRY---PE---LVFPCLGVHPVQASNAEQQRSANLKDLEDALPLIEHYKDDLLAIGEVGLDFTPRI---ANTDDQ---KEEQRQVFIRQIQLAKQLGLPLNVHSRSAGRPTINLLKEQGAEHVLLHAFDGKPSVAMEGVKAGYYFSIPPSIIRSEQKQKLVKQLPLENLCLETDSPALGPEKQIRNEPKNITYAAEYIAKVKGISLEEVTRVTTENALRLFPR 282
BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: A0A1Y3N0C6_PIRSE (Uncharacterized protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3N0C6_PIRSE) HSP 1 Score: 213 bits (543), Expect = 3.040e-62 Identity = 113/280 (40.36%), Postives = 168/280 (60.00%), Query Frame = 2 Query: 41 SKMFDCHAHLTDPSL-RDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHP----------------EKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQDEGVKRAVFHAFDGKPKYAVEAAKAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLF 829 + FDCHAH+ PS ++ + + + +A+ V+GI+ V+E+ +D L V+ N Q+ + P LGLHP + L + +L+LI H D+I C+GEVGLDYS + + E KE+Q+Q F KQ A+E +P+NVHSRSAGH+AI L + K + HAFDGKP YA++ +AGY+FS+PP + RS Q LV+ +PL+ ++LETDSPAL+P K NE N+ ++CE +A++K + V +V +TN NA +LF Sbjct: 2 ASYFDCHAHINSPSFSKEAISDLVKKAQEKNVKGIISVTETYEDCLDVL------NVVMQYPNIILPGLGLHPIQPLVDENGQRLDKGGRSSTLDEVYPILDLIKEHKDEIVCIGEVGLDYSPQFL-----KNVEEEKEIQKQIFQKQIELANEYNIPLNVHSRSAGHYAIETLISKNAKNVLLHAFDGKPGYALKGLQAGYYFSIPPSIRRSPQKQKLVKNLPLDRIILETDSPALSPEKNTINESSNVVISCEEIAKIKGISVEEVARITNENAIKLF 270
BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Match: I2CPC6_NANGC (Dnase domain containing 3 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CPC6_NANGC) HSP 1 Score: 214 bits (544), Expect = 3.110e-62 Identity = 133/290 (45.86%), Postives = 166/290 (57.24%), Query Frame = 2 Query: 47 MFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCARVNCDPQHRIRLHPSLGLHPEKADLAALEGMLELIDAHADDIACVGEVGLDYSRHLIGEAGTEAAERAKEVQRQCFAKQARRADELGLPVNVHSRSAGHHAIRLLQD--------------------------EGVKRAVFHAFDGKPKYAVEAA---KAGYFFSVPPIVCRSRGFQSLVQAVPLESLLLETDSPALAPVKAETNEPKNLTVACEWVARLKNVPVADVVEVTNSNARRLF 829 MFD HAHLT L LD L EA + GVR IVVVSE++ DA V+ L C Q+ +RLH SLGLHPE A L +L +L LI + +ACVGE+GLD+S H++G EA K +QR+C +Q A EL LPVNVHSR AGHHA+ LL++ EG RAV HA+DGK KYA AA + +FSVPP RS ++ +PLESLLLETD PALA VK E N P+NL ++ + + K V + V E+T NA LF Sbjct: 1 MFDVHAHLTAQELLPDLDRLLTEAYSVGVRDIVVVSENVRDAALVLNLPP---C--QNGVRLHKSLGLHPEHACLKSLSTVLNLIRENHTKLACVGEIGLDFSPHILGHDDAEAV---KALQRECMRQQVELAYELDLPVNVHSRGAGHHALSLLRETVSASSVADTLKTTERASSQTRARMYEGRVRAVMHAWDGKAKYAAAAAADSQQSIYFSVPPCASRSPVMIKWIERLPLESLLLETDCPALAAVKGEVNVPRNLQLSLQVIGARKGVGLDIVREITRKNAEELF 282 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1015.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1015.12.1 >prot_A-nodosum_M_contig1015.12.1 ID=prot_A-nodosum_M_contig1015.12.1|Name=mRNA_A-nodosum_M_contig1015.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=268bp MFDCHAHLTDPSLRDRLDERLVEAEAAGVRGIVVVSESLDDALQVVELCAback to top mRNA from alignment at A-nodosum_M_contig1015:90522..97675- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1015.12.1 ID=mRNA_A-nodosum_M_contig1015.12.1|Name=mRNA_A-nodosum_M_contig1015.12.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7154bp|location=Sequence derived from alignment at A-nodosum_M_contig1015:90522..97675- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1015:90522..97675- >mRNA_A-nodosum_M_contig1015.12.1 ID=mRNA_A-nodosum_M_contig1015.12.1|Name=mRNA_A-nodosum_M_contig1015.12.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at A-nodosum_M_contig1015:90522..97675- (Ascophyllum nodosum dioecious)back to top |