Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 0 |
Start | 1 |
Model size | 373 |
Hectar predicted targeting category | other localisation |
Exons | 3 |
Cds size | 366 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1680866373.4274743-UTR-A-nodosum_M_contig1013:3860..3867 | 1680866373.4274743-UTR-A-nodosum_M_contig1013:3860..3867 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1013 3861..3867 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1680866373.4375732-CDS-A-nodosum_M_contig1013:3867..3910 | 1680866373.4375732-CDS-A-nodosum_M_contig1013:3867..3910 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1013 3868..3910 + |
1680866373.448688-CDS-A-nodosum_M_contig1013:7967..8198 | 1680866373.448688-CDS-A-nodosum_M_contig1013:7967..8198 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1013 7968..8198 + |
1680866373.4596965-CDS-A-nodosum_M_contig1013:8448..8540 | 1680866373.4596965-CDS-A-nodosum_M_contig1013:8448..8540 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1013 8449..8540 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1013.1.1 >prot_A-nodosum_M_contig1013.1.1 ID=prot_A-nodosum_M_contig1013.1.1|Name=mRNA_A-nodosum_M_contig1013.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=122bp
MDKVTNDGDEIFPTSPQITRSMSSLSDGGRGRARGEHTDINNPNRTAHQR HCIVAKVTSMGETVSQPSEDKDSVESDVERPRAPSEELPEQGSNSTDGTG ERLQVMHQRLQEARDASESGTM back to topmRNA from alignment at A-nodosum_M_contig1013:3861..8540+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1013.1.1 ID=mRNA_A-nodosum_M_contig1013.1.1|Name=mRNA_A-nodosum_M_contig1013.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4680bp|location=Sequence derived from alignment at A-nodosum_M_contig1013:3861..8540+ (Ascophyllum nodosum dioecious) ACAAGGCATGGACAAAGTCACGAACGACGGTGATGAAATCTTTCCTACAA
GTGAGTTCGGTATCATATTTCAGACATTTTCAGCAAGATCGGCGCGATCC
TGGAATACCGGTCTCGTTCTCCAGTAGAAGCGAGCTAACCCACTATTGAA
TGAGTAGCGACAGACCTGAAATTATGGCGGGCTGCACTGCTGAGCCATGG
AACAGTTCGCGCTTGCCGGTGTCGTTTGCCTGGTTTGTGAGTCTGGCATA
CTTCGTGATGGGTGCATCACTTAGTCTACAGCTAATCGAACCAAGCTACT
GTAGAGGTACCAAAACTACCCAACACTCGAAGTATGAGTGAGTGTGCTCA
TCCTTTCTGTCGAATATATATTTTGGCGTTTTTGAAGATATTGTAAATAC
TACCCCCGATTTGCATGTGTCGGATAAATATGACCATTTCGACGGTTCGT
CCTTTTGGAGTACTTCAGTACAAACGATGTAGTATTTAAGACCTCTAGCG
CAAGGTCTCCACAATTACACTCTTACGTGCCCTACGCGATATTATACCGT
AGCGCTAATTTTTATACCTGTAGTTCACCTCTTCCTCGAAAGTAAACCCT
TGCCCGCCCTCCCCGCCCTTCTCCGACAACCACGGAAACCGCCGCCGGAA
GGCTTACAAAATTGCACCTCGATCTATTCGCTGCTCCATACGAATGACCC
TGTCCGTTGTGATAACTTATATTGAGCAGTCGGGGAGAATCATGGAACAA
CTATGATTCTCTATGGGGCTAGTTACTCCGCTTATACTGGACGGTAGGGT
CATATTCTCACGATGTGGTAGACCCCTACTCTGGTCAGTTTTTTATAGAG
CTCAAGTATCAAGTACTTTTGTCTCTAGGTGTTTATTGACGCCCCATTGT
GTTTCCCCCAATGCTATGCTACTAATACAATATGCTCTATATCATCTTCC
TCAAGACTCTAAGACCTTCCCTCTGGCGAGGGTTGCATCAATACACTAGT
GTTTAGGGACCCTAGAATGCTACGGAAGGCGAGCGAGGCTGTCTCCGAGG
GCAATGGCCCCGTCCACCAAGAAGAAGAATACGTGTTTGGCCAACCCGCG
CCGGTGGATCATTTTCGAGAGATAAAGAACCTTTCAAAAGAACAGGAGAA
AATGTTGAAAGAACTCCGCGATGATCTGAAGGATGGTATGAGGAGATTTA
TTGTACAGTATGCATCACGCCTAGAGCAGGACGCTCGGCAGCCACGTCTC
GCCATGGAGGCAGACGGGCAAGCAGACACTAAGACTCGCGAGCGCACGGA
GGGCGCCGCAACAGCAGTACAAGCAATGCGTGGGGATTGCTTTTCTGCAC
GCCGGGTTGAACTCGGCCCAAACACCAACTCGACCAGTTTCGGCGTGAAG
GCCGAACCTCCCGCTCTCCCTTGCAGGGATGATGTCGTGGTCGAGTGCGG
CGCTGCCGCATCCGAGTCGTGTCTCTCATCCATGGAGATGCGCCCATCAA
CAGCCGCTGGTGGCTTAGTTCCCACCGGCGACGCCTCCAAAGCCACGGAG
ACCAATTACAACCAGCCACCTCTTCGGCTTTGCTCGACCGAGGAGAGGGA
TCATCTCGAGGCGAATTGTAAGTCATCCGCCTCGAACGACAGCAGCAGCG
TCTTCCAGGAGAGGAACCTGTCTGCTACTCTCTATTGCCGGAGGGTCGTT
GACACAAAATCCAGGCAAAATAGGACCTTTGATCCAGGCGGTTCGCAAGG
TCACCTCCGCGCCTGCCCATTTTTGGGACCGTGACGCGCGTTGGTTTGTG
GCGAGGTTTTACGGGCTGGGGCAGCTGGAGACGAGCTGCAGCGTTTTTTC
GGAGGAGATTCGCTGGCTCTTTGGAAAAAGGCCGGTTATGATGCCGTGCC
AGGAAAAGTCTTGCCGTCGAGGGCGGCTCAAAACTACATGAACTCGAGGG
AAGAACAAAGGTCACGACGTCATGGCGACTGGAGGTTATTGGAAGTTAGG
GGCAAACGGTTGTCGAGGAGCGTCATGGAGTGATGAGCGTTTTGGAGCCA
ACAGCTTGACGGCAACTCCGCGAAGAGGACTCCTGCTTTCTGGACGTCTT
AGGACTTCAAGGACATCAGACCCCTTAATCTTCACAATATGGTATGCTGA
AAAGTGTACTCGTGTGCTGCTCTAGGTAGTACTGTAACGTTCCATGTGAC
CCTTCTATGCGTTTAGTAGATCGCTCTAGTAGCCCCCCTTTTTCCTTGAA
ATGCTGTTCTCTCAGGGAGGGCAAGTACTTGCTGACTCGTAGATTGCGGT
AGGTGATAGTTCGGTCGTTCATAATATTGCCTCAAGACTGGACTGAACTG
TTAGTACAGTACTACCGTAATTTTTCAATACCATGTCTTCCCCGCGAGCG
GAGCACGTATACTTTCCGAAGGATTCCCAAATATTCGCGTAGGGCTTGTT
CGTACAGCGTGTTCGTCTAGGTGTGCCCTTTCGAACTCGCGAAGCAGCTT
AGTGATGCTTGTATCGGGGAGGTATATCGTTCATGACCGCTCGACCGCTT
GTGCCCGCGACGCGTGTTGTAAGACGTTTTTCCCAAGAGAGAACCTAGCA
CTGCGTGCAAGGGATACAGTTTGTACCAAAATCTTAAAGCAATAGTAATC
AGTACTGAAGTGCGGTATCATGTTCACTTGAAGCATTTGGTAATATGGCT
GCTTGTGACAGCCCGTGCCTATATTGTACGCCGCATAGCCCTATTGTTTC
TCCCGCGATGCAGCTAGTCATTCACGACGAGTGTTTAGACTCAGAATGCC
CGACTGCCTGATTACCTTAGAAGACCAATGTGCAGACTCTGAAGGGTAGC
CCGCGATGGGCCATTTGGAAAAAATTGGCGTCCCTTTTCTCGCGACAAGA
GTACTTATTTTGAGACTAAGCTCTTTAGAGAGCACAGTCGTTCCTGTTGT
ATTGAAAATTCTACAGCACTTGAGTAGCTCGACTGAAACTTGCGAGGTAG
TATTGCCTCCGAATGCTCGTTCGCCTGATTCCCCGTAAATCTGTCTGTGA
TTGTTCAGAATTCAACAGCAGTCGAATAGTCAGGACTGGCTTGAGCCTTT
TCTCTTGACAACTGTTTGACCAGCGTGTCGACAACTCGCTCAATCGAACA
GCAGAGGTCAGTAGCACTTACTTTAAAAGTTCGATCGAAAACTTGCGACC
ACGTATCGTATTCTTCTAGCATATTCGCATACTGTTTTCCAATACGCGAT
AATCGACGTAGAGCTGCGTACGAGGGGATCATTCTTGGCTGAAATAATGT
TCCGCTTCCCTGGAGTTGTCCTTTGCTTGGAACCAGCAAGTCATAGTTGG
GAGTTTCGCTTTGGGGGCGCATAAACTAGGGAAGGACTTTTCCCATGCGC
TTTAAGATTTGAACATGCAATGCTCGTAGTCACCTGTGATGTTTTTTTTA
ATATTTGAGGCTCTAAGTACGTAGCGAGAGAGTGTTTTCCCCCATCTTGT
AGAGATAGATTGACTGCTATATGATCGCCTCTCTTTTCTCTAGCATGTTA
GCCTTCCACTACCAAAATAAGATTAGGGAGGGTGTCCGCTGTGATAACTT
ATATTGAGCAGTCGGGGAGAATCATGGAACAACTATGCTTCTCTATGGTT
AGTTACTCCGCTTGTACTGTACGGTAGGGTCAATATTCTCACGATGTGGT
AGAGCCCTACTCTGGTCAGTCTTTTATAGAGCTCAAGTATCAAGTACTTT
TGTCTCTAGGCGTTTATTGACGCCCCATTGTGTTTCCCCCAATGTCATGC
TATTAATACAATACGGTATCTATCATCTTCCTCAAGACTCTAAGACCTTC
CCTCTGGCGAGAGTTGTATCAATATGACCCATCCCAATGCTAAGAACATA
GCTAGAGCCTGCGAAATGAGATTTGGTCACGTGGTTGACGTTCAGGCGGA
CGAACCCACCATGATGAGCTACCGAGTGGTGTTAAAACAACGGTGCCTCT
GCAAAATGACTCTGGTGGGATTAACTCTAACTGTATTCTAAGGAGAGAGA
CAAATTAATGTTCTAAACATTCACTATCAAACGCGCCACTTTTAATTATC
CCTGCAGGCCCTCAGATTACAAGGTCTATGTCCTCTTTAAGTGACGGGGG
AAGAGGCAGAGCGAGGGGCGAACACACCGACATAAATAACCCAAACCGAA
CTGCCCACCAACGTCATTGTATTGTCGCCAAAGTGACATCGATGGGTGAA
ACGGTCTCACAACCCAGCGAAGATAAGGACAGCGTGGAGAGCGATGTAGA
GAGACCAAGAGCCCCTTCAGAAGAGCTTCCCGAGCAAGGTCGGGTACAGT
AGGGATCTTGATTCAGCGTTCAAGTATTTGAGGTTTTAACGAAATTTGTC
TAGTTGACTAGAAGGGAGGGAGGGGGGGGGGGGAGACATGTATAGCAAAA
CTCATCTCAACCTGAGATTGGCAACGAGTTAACTCGTGTCTGAGACTGAC
CACAAACCACGTCAAAGAGAACGCTGACTCGCTCCCAGTGCTTTTCGAAT
AGCTTGTCCTTTCGCCCGATCGTTGTGTTGCTGTGCAGGAAGTAATTCAA
CGGACGGCACGGGAGAGAGACTCCAAGTGATGCACCAACGGTTACAGGAA
GCACGCGATGCTTCAGAGAGTGGTACAATG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1013:3861..8540+ >mRNA_A-nodosum_M_contig1013.1.1 ID=mRNA_A-nodosum_M_contig1013.1.1|Name=mRNA_A-nodosum_M_contig1013.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=366bp|location=Sequence derived from alignment at A-nodosum_M_contig1013:3861..8540+ (Ascophyllum nodosum dioecious) ATGGACAAAGTCACGAACGACGGTGATGAAATCTTTCCTACAAGCCCTCA GATTACAAGGTCTATGTCCTCTTTAAGTGACGGGGGAAGAGGCAGAGCGA GGGGCGAACACACCGACATAAATAACCCAAACCGAACTGCCCACCAACGT CATTGTATTGTCGCCAAAGTGACATCGATGGGTGAAACGGTCTCACAACC CAGCGAAGATAAGGACAGCGTGGAGAGCGATGTAGAGAGACCAAGAGCCC CTTCAGAAGAGCTTCCCGAGCAAGGAAGTAATTCAACGGACGGCACGGGA GAGAGACTCCAAGTGATGCACCAACGGTTACAGGAAGCACGCGATGCTTC AGAGAGTGGTACAATG back to top
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