mRNA_A-nodosum_M_contig1012.8.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1012.8.1
Unique NamemRNA_A-nodosum_M_contig1012.8.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: D7G2R5_ECTSI (DUF2040 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R5_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 4.760e-109
Identity = 228/395 (57.72%), Postives = 269/395 (68.10%), Query Frame = 1 
Query:    1 MRKSGLKFGLIGSASSLKK-------EGGKAKPIGSKPPPRRRPAGATAVFDVDSDEDREPQE-DPRGVAAVNKRLSAISAKQERQAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKGMDGFYSSLITKNIAMGGGGEKSASLAASRTEPNRQGGAGNDEVHRGGSGEKA------------------GAGHERATDDNKEGVDGGVGSTSKADSNLEGDDGPTAKMVDPRATAANVKEDRNPRDDEASAAQASSAFSENAEDGEE-DGARKRARVEATAGGAPEYGETREVLEAGRGDDGG 1104
            MRKSG+KFGLIG+ASSLKK         G+ +PIGSKP PRRRPAG+T+VFD +SD++ E  + D  GV AVNKRL+AISAKQE+QAKK++EDALQADPSVFDYD VYDGMK S+ESKVAAATV+REKEKRQPKYIGNLLKQAK+RA+ESDRIF+RKLQKERE QDK+EGEATMKFVTSAYKKKL+EQ+KWELQQ+LEDE+EQR DVT  GM GFYS+LITKNIAMGG  EKSA+ A +         A  DE       E+A                  G     A+   +EG DGG   +S   ++  G  GPTA+MVDPRA      E +  R DEA    +  +     + GE  D   KRAR+   AG A + G+      A  GDDGG
Sbjct:    1 MRKSGVKFGLIGTASSLKKGSSSAAGAAGRGRPIGSKPAPRRRPAGSTSVFDANSDDEEEDSKGDLSGVTAVNKRLAAISAKQEKQAKKEYEDALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMGGFYSNLITKNIAMGGDVEKSANSAFTAGSKRH---AATDEYEMQDGNEQAXXXXXXXXXXXXXXXXXEGGPANGASQGGREGRDGGDADSSPGRTDESG--GPTARMVDPRAG-----EQKKSRRDEAGVRDSERSGRRRGDSGEAVDNVAKRARL---AGEASDGGD------ASVGDDGG 376
[Close]
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A835YZI8_9STRA (Coiled-coil domain-containing protein 55-domain containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZI8_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.150e-48
Identity = 115/223 (51.57%), Postives = 150/223 (67.26%), Query Frame = 1 
Query:   19 KFGLIGSASSLKKEGGKAKPIGSKPPPRRRPAG--ATAVFDVDSDEDREP-QEDPRGVAAVNKRLSAISAKQERQAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSR--EKEKR-QPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNK---GMDGFYSSLITKNIAMGG 660
            ++GL+G+A +LK +   AK   +   PR+ PA   A A F  DSD D     EDP   AAVN+RL+A  A++ R+ +K    A+  DPSVFDYDGVYD +   ++ K AAA  +R  +K KR QP+YIGNLL+QAK+R +E DR+++RKL KEREE DK  G A MKFVTSAYK KL+EQ+KWE+ Q  E E+E + +   K   GM  FYS+L+TKNIAMGG
Sbjct:    3 RYGLLGNAKTLKAQSVAAKTAKA---PRKAPARGPAVAAFGDDSDSDGGAGAEDPTSRAAVNRRLAAEQAERARRMEKVAVQAVMDDPSVFDYDGVYDEVSKGRDDKAAAAAAARGNDKTKRLQPRYIGNLLEQAKLRTVEQDRVYDRKLAKEREEGDKEFGAAEMKFVTSAYKAKLMEQKKWEVAQEREAEREAQAEADMKRGGGMTAFYSNLLTKNIAMGG 222
[Close]
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A8K1FKC2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKC2_PYTOL)

HSP 1 Score: 128 bits (321), Expect = 4.190e-30
Identity = 96/225 (42.67%), Postives = 135/225 (60.00%), Query Frame = 1 
Query:   10 SGLKFGLIGSASSLKKEGGKAKPIGSKPPPRRRPAGATAVFDVDSDEDREP---QEDPRGVAAVNKRLSAISAKQERQAKKD--FEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKG---MDGFYSSLITKNIAMGG 660
            SG ++GLI S     K+GGK + +        +PA     FD  ++    P   Q DPR      +R+   +A+  +QA  D   E AL  DPSVFDYDGVYD +++S++ KV+     RE EK Q KYIG L+++AKVR +E DR+ ER+L KERE  D   G+   K ++++YK+KL E ++W+ +    D KE  +DVT +G   M GFYS+L+TKNIAMGG
Sbjct:   16 SGKQYGLIVS----NKKGGKKELL--------KPASVFGGFDDANEATTTPGDAQMDPR------RRVVHEAARSVQQALVDRLHEKALAEDPSVFDYDGVYDEIQSSRQDKVSRRKAQRETEKAQSKYIGTLMEKAKVREIELDRVRERRLLKEREADDAQYGDKE-KLISASYKRKLQEMKRWDEEDARLDAKEAAEDVTKRGNEAMVGFYSNLLTKNIAMGG 221
[Close]
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A7S1XVS8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVS8_9STRA)

HSP 1 Score: 122 bits (307), Expect = 8.900e-29
Identity = 74/137 (54.01%), Postives = 100/137 (72.99%), Query Frame = 1 
Query:  256 ALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEG--EATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKGMDGFYSSLITKNIAMGG 660
            AL  D SVFDYDGVYD M ++++S  AAA  + E+++R+ KY  NLLKQA++R L+SDRI+ERKL++E  E  ++ G  +   KFV +AY+K+L E+  WE  +R E E+E R DVT  GM GFYS+L+TKNIAMGG
Sbjct:    4 ALTEDASVFDYDGVYDSMTSARDS--AAAAQASERKERKSKYTENLLKQAQMRKLQSDRIYERKLRREAAEVAEMHGGVKDEDKFVGAAYRKQLEEREAWEKAEREEAEREARNDVTKTGMMGFYSNLLTKNIAMGG 138
[Close]
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A7S3HBP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBP6_9STRA)

HSP 1 Score: 123 bits (308), Expect = 5.280e-28
Identity = 76/190 (40.00%), Postives = 116/190 (61.05%), Query Frame = 1 
Query:   91 PPPRRRPAGATAVFDVDSDEDREPQEDPRGVAAVNKRLSAISAKQERQAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKGMDGFYSSLITKNIAMGG 660
            PP + +P    ++FD D  +     ED   V+    R++A  A++    ++    A  A+P ++DYDG YD  K  +++K   +     K+  + +Y+ NLL  +K+R  E +R+FE+ L KER+ +D   G+   KFVT+AYKKKL+E +KWE + RL DE EQR DV   GM+GFY++L+TKN+AMGG
Sbjct:   22 PPAQIKPR--LSMFDRDDSD-----EDSSAVSNDVSRVNAQLARRNAILEQTMSAAASAEPDIYDYDGAYDSFKAKEQAKHQLSQPIATKDAPKARYVNNLLATSKMREKEKERVFEKNLLKERKVEDAEFGDKD-KFVTAAYKKKLLEDKKWEYEDRLADEVEQRTDVRKSGMEGFYANLLTKNVAMGG 203
[Close]
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A662Y6L8_9STRA (DUF2040 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6L8_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.450e-27
Identity = 77/171 (45.03%), Postives = 109/171 (63.74%), Query Frame = 1 
Query:  202 LSAISAKQERQAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKG---MDGFYSSLITKNIAMGGGGEKSASLAASRTEP 705
            L A  + Q+ Q ++    AL  DPSVFDYD VYD MK++++S+V    V RE EK+QPKYIG LL QAK+R +E++RI ER+L  ER+  D + G+   K V+++YK+KL E ++W+ +       E R DVT +G   M GFY++L  KNIAMGG    + S   ++ EP
Sbjct:   45 LEAARSLQQSQVERTRAQALADDPSVFDYDAVYDDMKSARQSEVTKRAVQREAEKKQPKYIGTLLAQAKIREVENERIRERRLLHERKADDALYGDKE-KLVSASYKRKLQEMKRWDEEDARLANLEDRDDVTKQGEHAMAGFYANL-NKNIAMGGSTANARSAYTAKEEP 213
[Close]
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A1V9ZKX0_9STRA (DUF2040 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKX0_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.750e-27
Identity = 76/153 (49.67%), Postives = 105/153 (68.63%), Query Frame = 1 
Query:  232 QAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKG---MDGFYSSLITKNIAMGGGGEKSAS 681
            +A++  ++AL +DP+VFDYDGVYD M+  +  + AA  V       Q KYI  LL++AK+R +E DRI ER+L KEREE DK+ G+ T KF+TS+YK+KL+E ++WE +     E E  QDVT +G   M GFY++L+T NIAMGG  EK+ S
Sbjct:   59 KAERAVQEALASDPNVFDYDGVYDSMQAERVKQKAAKKVEGVP---QSKYINVLLEKAKIREIEHDRIRERRLLKEREEDDKLHGD-TEKFITSSYKRKLMEAKRWEEEDARLAEIEAAQDVTKRGELGMAGFYANLLTNNIAMGGTIEKATS 207
[Close]
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A7S4E5L4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5L4_9STRA)

HSP 1 Score: 117 bits (293), Expect = 4.080e-26
Identity = 73/165 (44.24%), Postives = 103/165 (62.42%), Query Frame = 1 
Query:  190 VNKRLSAISAKQERQAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQP--KYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKGMDGFYSSLITKNIAMGGGGEKSA 678
            V +++  + A Q ++A      A   DPS++DYDGVYD MK  +  K++A +        +P  +YIG+L + AKVR  E DR++ER+L KE +EQDK     T +FVT+AYKK+L E RKW+ + R  DE E+R      GM GFYS+L+T+NIA G   EK+A
Sbjct:   52 VAQQMRDLGAAQRKRAXXQAAQAAAVDPSIYDYDGVYDQMKEDERKKISARSGLSNTNHSKPGARYIGSLKQAAKVREREFDRVYERQLLKE-QEQDKDTYGDTERFVTAAYKKQLQESRKWDAEDRRMDEVEERTSAQTSGMAGFYSNLLTRNIAAGADVEKAA 215
[Close]
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: D5AE85_PICSI (DUF2040 domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5AE85_PICSI)

HSP 1 Score: 117 bits (292), Expect = 5.730e-26
Identity = 75/182 (41.21%), Postives = 111/182 (60.99%), Query Frame = 1 
Query:  208 AISAKQERQAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKG-MDGFYSSLITKNIAMGGGGEKS-ASLAASRTEPNRQGGAGNDEVHRG 747
            A   K  R  ++  ++AL+ DPS+FDYDGVYD MK        A  +  ++ KR+PKYIG L+++AK+R  E + ++ER+L KER ++D +  +   KFVT+AYKKKL EQ KW  ++RL + +E+  DVT K  M  FY +L+ KN+A G    K+  ++  SR     +G A   E+H G
Sbjct:   47 ASKKKSHRDVEQQHKEALEQDPSIFDYDGVYDEMKGK-----TARPLQEDRIKREPKYIGKLMEKAKIRQQEQEIVYERQLAKERNKEDHLYADKE-KFVTAAYKKKLAEQAKWLEEERLRELREEANDVTKKSDMSDFYRNLLKKNVAFGANSSKTEVAVMPSRQHVESEGKAQPSELHLG 222
[Close]
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A1W0A4N0_9STRA (DUF2040 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4N0_9STRA)

HSP 1 Score: 115 bits (289), Expect = 7.080e-26
Identity = 73/163 (44.79%), Postives = 109/163 (66.87%), Query Frame = 1 
Query:  202 LSAISAKQERQAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKG---MDGFYSSLITKNIAMGGGGEKSAS 681
            + A+ AK   +A++  ++AL +DP+ FDYD VYD ++  +  +  A  ++      Q KYIG L+++AKVR +E DRI ER+L KEREE DK+ G+   KF+TS+YK+KL+E ++WE +     + E+ QDVT +G   M GFY++L+T NIAMGG  EK+ S
Sbjct:   50 MQAVVAKS--KAERAVQEALASDPNAFDYDDVYDSIQAQRTKQKEAKKINNAP---QSKYIGVLMEKAKVREIEHDRIRERRLLKEREEDDKLHGDKE-KFITSSYKRKLMEAKRWEEEDARLAKLEEAQDVTKRGQLGMAGFYANLLTNNIAMGGNMEKATS 206
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2R5_ECTSI4.760e-10957.72DUF2040 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YZI8_9STRA1.150e-4851.57Coiled-coil domain-containing protein 55-domain co... [more]
A0A8K1FKC2_PYTOL4.190e-3042.67Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1XVS8_9STRA8.900e-2954.01Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3HBP6_9STRA5.280e-2840.00Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A662Y6L8_9STRA1.450e-2745.03DUF2040 domain-containing protein n=2 Tax=Nothophy... [more]
A0A1V9ZKX0_9STRA2.750e-2749.67DUF2040 domain-containing protein n=1 Tax=Achlya h... [more]
A0A7S4E5L4_9STRA4.080e-2644.24Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D5AE85_PICSI5.730e-2641.21DUF2040 domain-containing protein n=1 Tax=Picea si... [more]
A0A1W0A4N0_9STRA7.080e-2644.79DUF2040 domain-containing protein n=1 Tax=Thrausto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1012contigA-nodosum_M_contig1012:82290..88327 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G2R5
Preferred nameNSRP1
PFAMsDUF2040
Model size1239
Max annot lvl2759|Eukaryota
KEGG koko:K07752,ko:K11414,ko:K13206,ko:K14437,ko:K20526
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000381,GO:0000398,GO:0002119,GO:0002164,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006928,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009791,GO:0009987,GO:0010467,GO:0010468,GO:0016070,GO:0016071,GO:0016477,GO:0016604,GO:0016607,GO:0019219,GO:0019222,GO:0031323,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0040011,GO:0040039,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043484,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045292,GO:0046483,GO:0048024,GO:0048856,GO:0048870,GO:0050684,GO:0050789,GO:0050794,GO:0051171,GO:0051179,GO:0051252,GO:0051674,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1903311,GO:1990904
Exons5
Evalue7.8e-110
EggNOG OGsKOG2117@1|root,KOG2117@2759|Eukaryota
Ec32 ortholog descriptionDomain of unknown function DUF2040
Ec32 orthologEc-11_003220.1
EC3.4.17.22,3.6.4.12
DescriptionmRNA binding
Cds size1239
COG categoryL
BRITEko00000,ko01000,ko01002,ko03036,ko03041,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866371.0806437-CDS-A-nodosum_M_contig1012:82289..825411680866371.0806437-CDS-A-nodosum_M_contig1012:82289..82541Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1012 82290..82541 -
1680866371.0968473-CDS-A-nodosum_M_contig1012:82595..829651680866371.0968473-CDS-A-nodosum_M_contig1012:82595..82965Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1012 82596..82965 -
1680866371.106725-CDS-A-nodosum_M_contig1012:83271..834111680866371.106725-CDS-A-nodosum_M_contig1012:83271..83411Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1012 83272..83411 -
1680866371.1173491-CDS-A-nodosum_M_contig1012:83916..840761680866371.1173491-CDS-A-nodosum_M_contig1012:83916..84076Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1012 83917..84076 -
1680866371.1277306-CDS-A-nodosum_M_contig1012:88010..883271680866371.1277306-CDS-A-nodosum_M_contig1012:88010..88327Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1012 88011..88327 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1012.8.1prot_A-nodosum_M_contig1012.8.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1012 82290..88327 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1012.8.1

>prot_A-nodosum_M_contig1012.8.1 ID=prot_A-nodosum_M_contig1012.8.1|Name=mRNA_A-nodosum_M_contig1012.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=413bp
MRKSGLKFGLIGSASSLKKEGGKAKPIGSKPPPRRRPAGATAVFDVDSDE
DREPQEDPRGVAAVNKRLSAISAKQERQAKKDFEDALQADPSVFDYDGVY
DGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKL
QKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVT
NKGMDGFYSSLITKNIAMGGGGEKSASLAASRTEPNRQGGAGNDEVHRGG
SGEKAGAGHERATDDNKEGVDGGVGSTSKADSNLEGDDGPTAKMVDPRAT
AANVKEDRNPRDDEASAAQASSAFSENAEDGEEDGARKRARVEATAGGAP
EYGETREVLEAGRGDDGGRKGTEVATGENITEEAEKAAVAKARKEAAIKA
ARERFLSRKKGS*
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mRNA from alignment at A-nodosum_M_contig1012:82290..88327-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1012.8.1 ID=mRNA_A-nodosum_M_contig1012.8.1|Name=mRNA_A-nodosum_M_contig1012.8.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6038bp|location=Sequence derived from alignment at A-nodosum_M_contig1012:82290..88327- (Ascophyllum nodosum dioecious)
ATGCGAAAGTCGGGTTTGAAGTTCGGCCTCATCGGATCGGCGTCTTCCCT
GAAAAAGGAGGGAGGCAAGGCAAAACCCATCGGATCTAAGCCTCCACCGC
GACGCCGACCGGCCGGTGCAACGGCAGTGTTTGACGTCGATTCCGATGAG
GACAGGGAGCCTCAAGAGGATCCCAGAGGAGTGGCGGCGGTGAACAAGAG
ACTGTCGGCTATATCTGCGAAGCAGGAGAGACAGGCCAAGAAGGACTTCG
AGGATGCTCTACAGGCCGACCCTAGTGTATTCGACTATGATGGTGTATAC
GACGGAATGAAAAACAGGTAAAATTCCGACTGTCCAGTATCAGGACCTTC
TTCAGGAATATACTATTAGTTGATCACGCCTGGAGACTGTTTATTATTTA
TGTATACATGGATATCACATATTGCACGAGTAAGGATCAACCGGGTAAGG
TTGCCAATCCTGCTCGTGGTCAGCTGAACAGGGAAAATGAATATTTCCCT
GTCCCCGTTCGCGCCTGAGAATTTGGTCTCGCGAGACGGGTTCGGCAGTC
CCGTCCCGCGTCAGCGTGCTCATCTCCATACTCAGGCTGGATCTGGTGCT
TACTTACGGGATTCCTCCCGAGTTCCGCGACGGCGTCCATTTATTTATTT
ATACCGCCATACGCCATCGGGTCAGTCCCGAGTTTATCGTGTCACGCAAA
TGCGTACCGATGACATTCACAGCCGAGAGTCCGCGGGCACAGGGCCAGTA
AACCTCGAGGTAGTTCCAGTAACGGGTGCTGCCTTGGCAAGTCACCATGG
ACCAATTAATATGCGCCTCTCTTTCCCACACCCAAGTGCACAAGACCATC
TTGTATAGCTCTAGGCATTAAAACATGGAGACGATGAAAAATGGAATCGC
CAACCAGGCACCCGATTTTCAGGACGGCAGAAAAAGCTACTGCATGTGGA
CGCCTTAAAATTGGTTTTGGTGACATGTTGGAGTGAAAAAAGCTATTGCG
TATATGGCGCCGACTTATTATTATGAATAGTGGTTTATCTTTTCATTACT
AATAATAATACCAAGGAGATAACCTGCCAACATCCGTATGCCAGAGCACC
CGACACACGATGCTGTCTTCACCCTAGCGCACAGATAAGATGTGCTGCTG
TTGAGCGGCGCTTGCTTTTGTTCTTGTTGAGCCAGGTCTGGTATTCCATG
TCCACCGAACGCGATGAAAGAAAGGCAACCAAGCTGTTGATCAAGCCTTT
TTCTATTTTCATGTGTTTCTACAGTCAATACGGGACGGGGAAAAAAAAAA
AAAAATTCTCTGAATGCCTGGTTCACGTAGCAGTGCTTCAGCTCGGGGCA
TTCGACATCACACGCTTTGCCTAGAGCTGGGGCGATCACAAACAAATCTC
GCGAGTGGGCCGGTGGCTGCCTCGTCGCGTTGGCTCTCGTAGCGATTCTA
AACCAGGTACGGCTAGGGGAACGGCCGATCTTCTCTCATTTTTTTCGCTC
GGGCGTTGGTTGCTTCTGCAGTAACATAATTCCATTTATCAGTGCCCGAT
TTCAGTTGGGGGGGAATCGCTGAACAATGGATGGTCATTTTTCAGCGGGC
CGAGACAGGCCGGTAAAAATAGGCTGGTGAGAAATGGCATTTACCAGTCT
ATACAATGATGTCCTAAAAAGGGGCCGCTGGAAAATGGCGATTTCATTTT
TCAAGCGACTCCTCTTTTCAGCCCATACAAGATTGTCTAAAGCCGGTCGC
CCCGGTAGCTCAGAAGTAACCTCGTAACCTTCTGACACGCTGGGACGTGA
GTTCGAATCCCGGTAAACGGGATTTTTTCCCTCTAAAAAATAAATAATCA
ATAAAATAAAATGTCCAACAAATGGAGAACGAGTAAATTGTTAGTACACA
AAAATTCGACTTCACGGTCGACGAGGGAAAGCGATGGCTGAATCTTTCTC
GCGAGAAAAAGTAAGGTACGCACCGCAGAAGGAAGGTGGATGAGAAATCC
TGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCAACGAACTTG
ATGTCCAGAATAAATGGGAAGAAAATACACACACAAACAAGCTGAAACAT
GGAGTTCGCTGAGAAATGAAAGCGCGATTTTTCAGGGATTGTTTTCCAGG
AGGCCATTTCATGAGGCTGAAATCGGTGACTTTTCACCAGCCGTCCGAGG
TCGCTCGTCGACTAATGAATGGGCTCCCATGGTGCAGCGATTCCCCACGT
GAAATCGGGCGCTGAAAAATGGATAGGATGACTGGATAGACATTCACCGA
GGCAACTACAGACTTTACTACTGGACCCAGGGTGGCACGCAATACTGTTT
AAAGAAAAATATGAACGCATCTATACCTTCTGCGCATCCCACAGTTATTG
TGGACAATACTTGAGCAGAGTGCGGTGCCACAATGTCACCTTGCCATGGC
TGGCGACAAGAGTAGCTTGGTGAGAAGCTAGCCGAAAAAAATATTGGAGT
ATGAGAGAGATTAGCCATTCCTGTAGCCTAGCTGCTTTACGATCACCATG
AAAGCCACGTCGACGAGGCAGACGCCGGCTCGCGCGCCAGATTTGTTTGT
GATCACCCCCAACTCGAAGCAAAGCGTGTGATATCGAATGCTGCGCTTGC
TGAAGCGCTGCTACGTGACCATGTTTTCCGACAGTCGAGATCTGGAGGGG
GGGTTCATCTCATGTCAACTCGTCTGTAGAAACACTTGAAAATAGAACGG
ATTCAACTTGCTCCGCACAAGCCAGAGTAAGTACACTTGATCACAAACAG
CAGTGCGAGTCCACTAGTAGAAGCTTGGTTGCCTTGCATTCCGATCGGTG
GGCATGAAAGATCAGACATGGCCCAACAAAAACAGAATCAAGCGTCGTTC
AAGAGCAGCACGTTACAGCACATGTGTGCGCCAAGATAAGAGACATCACA
GGGTGTTGGGTGCTCTGGCTTGCGGATATGAGCAGGATATCTCCCTTTTA
TTAGAAATAATAGAAAGGACTCAGTCAGCGCCAAAGCTTCGTATAAGACC
AATTTTAATTTCATACCGCCCATAGAAGAAGAAAAAAACTGCTGTCCTGA
AAATCGGGCGCCTGGTGGGCGTATTCATTCTTCGGCTACCCCATTTTTCA
GGCCCATACAAGATGGCCTGAGATCATAACTGGCGAACCCGACCTGTGTG
GGTACTTGTGTTTGCTGTACAGCAGCCGATCTGTCCACTCCTCGAACGCG
ACGCCCCGGGTTTTCACCGGAAATTATGAAGTTCTCGAGGGTTTGAACGA
GTCCAGAGTCGCGGAAATCGTGTAGTTCTGGAGAGTTTCAACGAGTCCAG
AGCTTAAAGAAATCGCGGTATCGGAGAGCCCACGCCGTCCGGGGAAATGT
AGTCGCAGTCAGTCCAAATCCTTGGTTGGGAACATGGGCTGTTTAAAGAA
AAATCAGAGCACACCTAGACCTTCTGAGCATTTCCCGGTTATGGGGGGGG
AAATGTGTTATTGCATACTGTTGAGCAAAAACTCTAGATGGAGTTTCGTA
TGTCAGTAAGATTGGAGCGAGGATAAAGAGTCTCGACGAAAGATAGAACA
ACAATCCAAAGGCACCAGAAGCAGTTGTTCACCTCTGCAGGAATGTTCGT
TGCTCGTGTTAGGTACAGTCTCAAGTACGAGTTCTACTTCTGTATGCTAC
GGGCTTTCGTTCAGTCGTTCGTCGATATGTAAGCGCCCCGGCAGTCTCAC
GCAGTTAGCATACAGTTACAGCTGTCTGTGTCCTCTTTTTTTTGGGGGAG
ATTTGGCCTTTTCCGAGTATTTTTTGTACCGTTTCCGCTTTCTCTTTGTA
GGGAGAGTACATGTACGTTTTCCTTCCGGTTGGTGTTTGATTACCTGACA
CACGGGCTGGATTTTGTCATCAGCTTATGTGAGAATTCAATCAACCAATC
AATCAGTTGTATGCTCTGTCGCCGCTGAGCACCCGGAGGGCCTTGGTTGT
CGTAGTAACTTTAGCGACCGCAATGTCTGCATCTGTGTGTCCGTATGCCC
GTCTGTCTTGAGTTTTATGTCTGTGTCTTGTGTGTTTAAATATTGTGTGT
ATATTGTATCATTAGAAAAGAGCGGCGGTTGCCAAACGTAACGATACAGT
TAACAGGCGCAGGGGCTAATCTTACTATTAGTACGTGTCGCGATCAGCTA
AAAGCGCCAAGCCCCCCCTCCGTCTATCCTATCATTTTCATGGATCAACA
GTCAAGAGTCGAAGGTGGCCGCCGCAACAGTTTCTCGAGAGAAGGAGAAG
AGGCAGCCCAAGTATATTGGTAACCTGCTCAAGCAGGCCAAGGTACGGGC
GCTGGAGTCGGACCGCATTTTCGAGCGCAAGCTTCAAAAGGAGAGAGAGG
AGCAGGACAAGGTGCGCCGTAGATCGGTTCAGTAGCTCTGCACAGCTAGG
ATTCCTACGGTCAGTCAAATAGCTTGTGCTTCTGTATTTCATTGCCTATA
GCTCTTCCGATGCCCGCCGAGACGTTTTTGTGTGGAAGACTCACCTGTAC
GATGTGGTTTAGAATGTACTCAACCTCATGGGCGTGGATATCCGCAGAAG
AAATTGAAATTGTTTCATGGCAGAGCGGTTTTGTACCAGCGAGTTGCTAT
CAGCGATCAGCTGGCATCAGCCGCGCGAAATTGACGTTTGTTTCATGGGA
GACCAGTTTTTTACCAGCGAGTTGCTATCGACTGTCAGCTGGCATCAGCT
GCGCTTACGTCTTCGTCGCATTTCATTATGGCATGCTGTACGCTGCAGTG
CTTTTCATTCTGCGAATGTGTGGTTTCTTCGATCCCCTGCGGAAAAAACA
CGCACAAACGACGGCACGTTTACCGTATATACACATAGCTGTAATTTTTT
GTGCTTGGCTTGTCAGGTGGAGGGCGAGGCCACGATGAAGTTTGTGACGT
CTGCTTATAAGAAGAAACTCGTGGAGCAGAGAAAGTGGGAGCTTCAGCAG
CGGCTGGAAGACGAAAAGGAGCAACGTCAAGACGTAACCAACAAGGGCAT
GGACGGGTACGTGTTTGACGTAGGGCACCCTTGGAGACGGAACCGCAGAC
TACCTATCCGACTTCTGTGTCCCGGATATTTTTGTTTCTAGAAACCAGGA
CAAACACGACCTACTGTTTATAGGACGCGCGCGTTGATTTTGCAGTTGGT
GCCTCAAATGAGGCGCGCAATCGGCTGACGGAAAAACACCCCTCGTAAAA
CTTCAGGCTCGATTTGAAACGTTCACCATTTCGATCGCCACGCGAGCGTA
TCGTCTCCGTTCAAGTCGCACTCAGTGTGTTGTTTGTCGTCACGGGTGCG
CCTGGCTGGCAGGTTTTATTCAAGTCTCATTACCAAGAACATCGCCATGG
GTGGTGGTGGCGAGAAGTCCGCGAGTTTGGCGGCATCCCGGACAGAACCG
AACCGGCAAGGGGGCGCCGGAAACGACGAAGTACATCGAGGGGGCTCAGG
GGAGAAGGCAGGAGCGGGCCATGAGCGAGCGACAGACGACAACAAGGAGG
GGGTTGACGGGGGAGTTGGTTCCACCAGTAAAGCCGACTCGAACCTGGAA
GGAGACGATGGCCCGACCGCGAAAATGGTCGATCCCCGGGCAACGGCGGC
AAACGTAAAGGAAGACAGAAATCCACGAGACGACGAGGCAAGCGCTGCCC
AAGCCTCATCCGCATTTTCAGAGAATGCGGAAGTCGAAGCGATCAGCGAC
GGGGGCAAGGGGGGGGTTCGGCGTCGAATCGAACAGGATGGTGAAGAAGA
TGGCGCCAGAAAAAGGGCTCGCGTGGAAGCAACGGCCGGTGGCGCGCCAG
AGTATGGGGAGACGCGCGAGGTGTTGGAGGCTGGAAGAGGCGACGATGGC
GGCAGAAAGGGAACGGAAGTGGCGACGGGGGAGAATATTACGGAGGAGGC
GGAAAAAGCGGCGGTCGCGAAGGCGAGAAAAGAGGCGGCGATCAAAGCGG
CGCGGGAGCGTTTCTTGTCGAGAAAAAAAGGCTCTTAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1012:82290..88327-

>mRNA_A-nodosum_M_contig1012.8.1 ID=mRNA_A-nodosum_M_contig1012.8.1|Name=mRNA_A-nodosum_M_contig1012.8.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1239bp|location=Sequence derived from alignment at A-nodosum_M_contig1012:82290..88327- (Ascophyllum nodosum dioecious)
ATGCGAAAGTCGGGTTTGAAGTTCGGCCTCATCGGATCGGCGTCTTCCCT
GAAAAAGGAGGGAGGCAAGGCAAAACCCATCGGATCTAAGCCTCCACCGC
GACGCCGACCGGCCGGTGCAACGGCAGTGTTTGACGTCGATTCCGATGAG
GACAGGGAGCCTCAAGAGGATCCCAGAGGAGTGGCGGCGGTGAACAAGAG
ACTGTCGGCTATATCTGCGAAGCAGGAGAGACAGGCCAAGAAGGACTTCG
AGGATGCTCTACAGGCCGACCCTAGTGTATTCGACTATGATGGTGTATAC
GACGGAATGAAAAACAGTCAAGAGTCGAAGGTGGCCGCCGCAACAGTTTC
TCGAGAGAAGGAGAAGAGGCAGCCCAAGTATATTGGTAACCTGCTCAAGC
AGGCCAAGGTACGGGCGCTGGAGTCGGACCGCATTTTCGAGCGCAAGCTT
CAAAAGGAGAGAGAGGAGCAGGACAAGGTGGAGGGCGAGGCCACGATGAA
GTTTGTGACGTCTGCTTATAAGAAGAAACTCGTGGAGCAGAGAAAGTGGG
AGCTTCAGCAGCGGCTGGAAGACGAAAAGGAGCAACGTCAAGACGTAACC
AACAAGGGCATGGACGGGTTTTATTCAAGTCTCATTACCAAGAACATCGC
CATGGGTGGTGGTGGCGAGAAGTCCGCGAGTTTGGCGGCATCCCGGACAG
AACCGAACCGGCAAGGGGGCGCCGGAAACGACGAAGTACATCGAGGGGGC
TCAGGGGAGAAGGCAGGAGCGGGCCATGAGCGAGCGACAGACGACAACAA
GGAGGGGGTTGACGGGGGAGTTGGTTCCACCAGTAAAGCCGACTCGAACC
TGGAAGGAGACGATGGCCCGACCGCGAAAATGGTCGATCCCCGGGCAACG
GCGGCAAACGTAAAGGAAGACAGAAATCCACGAGACGACGAGGCAAGCGC
TGCCCAAGCCTCATCCGCATTTTCAGAGAATGCGGAAGATGGTGAAGAAG
ATGGCGCCAGAAAAAGGGCTCGCGTGGAAGCAACGGCCGGTGGCGCGCCA
GAGTATGGGGAGACGCGCGAGGTGTTGGAGGCTGGAAGAGGCGACGATGG
CGGCAGAAAGGGAACGGAAGTGGCGACGGGGGAGAATATTACGGAGGAGG
CGGAAAAAGCGGCGGTCGCGAAGGCGAGAAAAGAGGCGGCGATCAAAGCG
GCGCGGGAGCGTTTCTTGTCGAGAAAAAAAGGCTCTTAG
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