mRNA_A-nodosum_M_contig1012.2.1 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1012.2.1 vs. uniprot
Match: D7G2Q7_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Q7_ECTSI) HSP 1 Score: 328 bits (842), Expect = 6.230e-108 Identity = 165/196 (84.18%), Postives = 179/196 (91.33%), Query Frame = 1 Query: 1 MSESSESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEARILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTLG 588
MS+++ESAGALGTLFFYV+FVHPVC+WILAPKRF KDRAIVYAI FLATIA GKMALE AERG N+YQLLG+RRG SAIEIKRAYRQLSLELHPDKNPSQDAA+ FSK+ AA E ILMDSE+REIYDKLGPE A SK P NENTML+EMA+WY+TWGVLAYVMTLGK+NRQARDWVFTGQIVMLA EVAIVTT G
Sbjct: 1 MSDTAESAGALGTLFFYVMFVHPVCAWILAPKRFPKDRAIVYAIAFLATIAIGKMALENAERGPNFYQLLGVRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADMFSKIQAAQE--ILMDSEKREIYDKLGPEAATSKHPFNENTMLIEMAIWYITWGVLAYVMTLGKANRQARDWVFTGQIVMLAVEVAIVTTPG 194
BLAST of mRNA_A-nodosum_M_contig1012.2.1 vs. uniprot
Match: A0A6H5K8B0_9PHAE (HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8B0_9PHAE) HSP 1 Score: 315 bits (807), Expect = 2.780e-103 Identity = 164/219 (74.89%), Postives = 179/219 (81.74%), Query Frame = 1 Query: 1 MSESSESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKM-----------------------ALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEARILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTLG 588
MS+++ESAGALGTLFFYV+FVHPVC+WILAPKRF KDRAIVYAI FLATIA GKM ALE AERG N+YQLLG+RRG SAIEIKRAYRQLSLELHPDKNPSQDAA+ FSK+ AA E +LMDSE+REIYDKLGPE A SK P NENTML+EMA+WY+TWGVLAYVMTLGK+NRQARDWVFTGQIVMLA EVAIVTT G
Sbjct: 1 MSDTAESAGALGTLFFYVMFVHPVCAWILAPKRFPKDRAIVYAIAFLATIAIGKMVRDGQRSQTNKKTIGWYRPVAKMALENAERGPNFYQLLGVRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADMFSKIQAAQE--VLMDSEKREIYDKLGPEAATSKHPFNENTMLIEMAIWYITWGVLAYVMTLGKANRQARDWVFTGQIVMLAVEVAIVTTPG 217
BLAST of mRNA_A-nodosum_M_contig1012.2.1 vs. uniprot
Match: A0A7S2V6D8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6D8_9STRA) HSP 1 Score: 205 bits (521), Expect = 7.860e-60 Identity = 97/188 (51.60%), Postives = 140/188 (74.47%), Query Frame = 1 Query: 25 GALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEARILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTLG 588
G LG FFYV+FV+PV +WIL P RF+K + I+YAI FL IA K+ +++ +RG NYYQ+LG+ R + +EIKRAY+++++ELHPDKNPS +A E F+++ +A + +LMD E RE+Y+K G + S + +E ML+E+A++Y+TWG+LAYV+TLGKS+ AR W+FTG+IVML AEV + G
Sbjct: 5 GGLGDFFFYVMFVYPVTNWILKPGRFQKKKGIMYAIAFLVVIASIKIGVDVMDRGPNYYQVLGVNRASNPLEIKRAYKKMAVELHPDKNPSPNAEEEFNRLKSAYD--VLMDMELREVYNKFGEDGIKSNKRFDEYQMLLEIAIFYVTWGMLAYVLTLGKSSVTARTWIFTGEIVMLVAEVTFMLNQG 190
BLAST of mRNA_A-nodosum_M_contig1012.2.1 vs. uniprot
Match: A0A6U1ZV61_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1ZV61_TRICV) HSP 1 Score: 198 bits (504), Expect = 4.840e-57 Identity = 95/190 (50.00%), Postives = 132/190 (69.47%), Query Frame = 1 Query: 10 SSESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEARILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVT 579
+++ L FFYV VHP +WIL P RF K ++I+YAI FLA +A K LEM RG N+YQLLG+ R + +EIKRAY++LSL+LHPDKN + DA+ERF ++ + + +LMD E RE+Y+K GPE AS + +E +E+ V+Y+TWG++ +V+TLGK + AR W FTG IVML E+AI+T
Sbjct: 7 AADDLSGLSGFFFYVFIVHPATAWILRPGRFEKKKSIMYAIGFLAALASIKTGLEMQARGPNHYQLLGVTRASNPLEIKRAYKKLSLQLHPDKNTAPDASERFDEVKKSYD--VLMDMELREVYNKFGPEGIASNKRFDETQFFIELGVFYITWGMMVFVLTLGKKSGDARQWCFTGMIVMLVCEIAIMT 194
BLAST of mRNA_A-nodosum_M_contig1012.2.1 vs. uniprot
Match: A0A835YNL9_9STRA (Heat shock protein 40 like protein/ DnaJ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL9_9STRA) HSP 1 Score: 197 bits (500), Expect = 5.890e-57 Identity = 103/207 (49.76%), Postives = 146/207 (70.53%), Query Frame = 1 Query: 1 MSESSESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEARILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTLGWGRAAIVATPW 621
M++ S G + +L FYV+ V+P C+WIL KRF + R+IVYAILFL IA K+ALE +RG N+YQLLG+ R S +IK+AY++LSLELHPDKNPS DAA++F+ + A + +L D E R+IY+KLGPE + Q ++++ +++++AV Y+ WGV+AY++TLGKS AR VFTG++VML EVA + + A V PW
Sbjct: 1 MADGDGSDGIV-SLLFYVVLVYPACNWILTSKRFSRRRSIVYAILFLGVIAIAKVALEWKDRGPNHYQLLGVGRTASVGDIKQAYKRLSLELHPDKNPSPDAADQFTAVKDAYD--VLTDVEFRDIYNKLGPEAIRTHQRLDDSQLMLQIAVQYIVWGVIAYMLTLGKSGESARSLVFTGEMVMLVFEVANIRKP---QGASVLPPW 201
BLAST of mRNA_A-nodosum_M_contig1012.2.1 vs. uniprot
Match: A0A1E7FEZ0_9STRA (DnaJ-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEZ0_9STRA) HSP 1 Score: 196 bits (499), Expect = 2.410e-56 Identity = 96/197 (48.73%), Postives = 137/197 (69.54%), Query Frame = 1 Query: 13 SESAGA-------LGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEARILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTT 582
SE AGA LG FFYV VHP+ +WIL P RF + ++I+YAI FLA +A K LE+ ++G NYYQ+L + R + +EIKRAY++L L+LHPDKNPS DAA+ F ++ A + ILMD E R++Y+K G E + +E L+E+A++Y++W V+A+++T+GK + QARDWVFTG IVML EV ++T+
Sbjct: 2 SEDAGAGSDDFSGLGGFFFYVFLVHPITAWILRPGRFERKKSIMYAIAFLAALAAVKTGLEIQQQGPNYYQILDVTRESNPLEIKRAYKKLGLKLHPDKNPSPDAADEFDRVKQAYD--ILMDLELRDVYNKFGKEGVRDNKRYSETQFLIEVAIFYVSWAVMAFLLTMGKKSGQARDWVFTGLIVMLVVEVVVMTS 196
BLAST of mRNA_A-nodosum_M_contig1012.2.1 vs. uniprot
Match: A0A7R9WWC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WWC3_9STRA) HSP 1 Score: 192 bits (488), Expect = 3.280e-56 Identity = 94/198 (47.47%), Postives = 139/198 (70.20%), Query Frame = 1 Query: 1 MSESSESAG----ALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEARILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTT 582
MS+S S G LG FFYV VHP +WIL P RF + R+I+YAI FLA +A K LEM +RG NYY +L + R + +EIKRAY++LSL+LHPDKNPS DA+++F ++ A + +LMD E R++Y+K G E + + +E L+E+AV+Y+++G++A+++TLGK + +AR+W FTG I ML E+A++T+
Sbjct: 38 MSDSDASGGDDLSGLGGFFFYVFIVHPATAWILRPGRFPRQRSIMYAIGFLALLAAVKTGLEMQQRGPNYYSMLSVTRDSNPLEIKRAYKKLSLQLHPDKNPSPDASDQFDRVKQAYD--VLMDMELRDVYNKFGKEGIKNNKRFSETQFLLEVAVFYVSYGIMAFMLTLGKKSGEARNWTFTGLIAMLIVEIALMTS 233
BLAST of mRNA_A-nodosum_M_contig1012.2.1 vs. uniprot
Match: A0A7S1D3H9_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D3H9_CYCTE) HSP 1 Score: 190 bits (482), Expect = 2.930e-55 Identity = 94/199 (47.24%), Postives = 135/199 (67.84%), Query Frame = 1 Query: 1 MSES---SESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEARILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTLG 588
MSES S+ LG FFYV +HP +WIL P RF + ++I+YAI FLA +A K LE+ RG+NYY +L + R + +EIKRAY++ SLELHPDKNPS DA +F + A + +LMD E RE+Y+K G E + + +E L+E+AV+Y++WG++ +++TLGK + +AR+W FTG +VML EV I+T+ G
Sbjct: 5 MSESQAASDDLSGLGGFFFYVFIIHPCTAWILRPGRFERKKSIMYAIAFLAAVAAIKSGLELQARGSNYYNMLKVTRNSTPLEIKRAYKRKSLELHPDKNPSPDATSQFDAVKQAYD--VLMDLELREVYNKFGKEGVNASKRYSETQFLMELAVFYVSWGLMVFMLTLGKRSGEARNWTFTGLVVMLVFEVVIMTSPG 201
BLAST of mRNA_A-nodosum_M_contig1012.2.1 vs. uniprot
Match: A0A448Z810_9STRA (J domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z810_9STRA) HSP 1 Score: 193 bits (490), Expect = 5.080e-55 Identity = 91/198 (45.96%), Postives = 139/198 (70.20%), Query Frame = 1 Query: 1 MSESSESAG----ALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEARILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTT 582
MSE + + G LG FFY+ VHP+ +WIL P RF + ++I+YAI FLA +A K LEM ++G NYYQ+L + R + +EIKR+Y++LSL+LHPDKN S +AA+ F ++ A + ++MD E R++Y+K G E A+ + +E L+E+A++Y++W V+ +++T+GK + QARDWVFTG IVML EV ++T+
Sbjct: 1 MSEDASAGGDDFSGLGGFFFYMFIVHPITAWILKPGRFERKKSIMYAIAFLAALAAIKTGLEMQQQGPNYYQILDVTRESNPLEIKRSYKKLSLKLHPDKNKSPNAADEFDRVKQAYD--VIMDLELRDVYNKFGKEGVANNKRYSETQFLIEVAIFYVSWAVMTFLLTMGKKSGQARDWVFTGMIVMLVVEVVVMTS 196
BLAST of mRNA_A-nodosum_M_contig1012.2.1 vs. uniprot
Match: A0A7S0GF48_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GF48_9STRA) HSP 1 Score: 190 bits (482), Expect = 6.850e-54 Identity = 88/190 (46.32%), Postives = 132/190 (69.47%), Query Frame = 1 Query: 13 SESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEARILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTT 582
++ GA+G+ FFYV VHP +WIL P RF + ++I+YAI FLA +A K +EM E+G N+Y LL + R S ++IKRAY++LSL LHPDKN + DA E+F + + + +L+D E RE+Y+K G S + +E+T +E+ V+Y+TWG++ Y++TLGK + +AR W FTG I+ML E+AI+T+
Sbjct: 2 ADDLGAIGSFFFYVFIVHPATAWILRPGRFERSKSIMYAIAFLAALAAVKTGIEMNEKGPNHYSLLNVDRASSPLDIKRAYKKLSLVLHPDKNDAPDAEEQFDNLKKSYD--VLIDMEYREVYNKFGAAGIESNKRFDESTFFMELGVFYVTWGIMVYMLTLGKKSGEARQWTFTGLILMLVIEIAIMTS 189 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1012.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1012.2.1 >prot_A-nodosum_M_contig1012.2.1 ID=prot_A-nodosum_M_contig1012.2.1|Name=mRNA_A-nodosum_M_contig1012.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=233bp MSESSESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIback to top mRNA from alignment at A-nodosum_M_contig1012:14978..21786+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1012.2.1 ID=mRNA_A-nodosum_M_contig1012.2.1|Name=mRNA_A-nodosum_M_contig1012.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6809bp|location=Sequence derived from alignment at A-nodosum_M_contig1012:14978..21786+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1012:14978..21786+ >mRNA_A-nodosum_M_contig1012.2.1 ID=mRNA_A-nodosum_M_contig1012.2.1|Name=mRNA_A-nodosum_M_contig1012.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=699bp|location=Sequence derived from alignment at A-nodosum_M_contig1012:14978..21786+ (Ascophyllum nodosum dioecious)back to top |