Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 159 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 102 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866370.305903-UTR-A-nodosum_M_contig10113:11484..11488 | 1680866370.305903-UTR-A-nodosum_M_contig10113:11484..11488 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig10113 11485..11488 - |
| 1680866370.3409798-UTR-A-nodosum_M_contig10113:11599..11652 | 1680866370.3409798-UTR-A-nodosum_M_contig10113:11599..11652 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig10113 11600..11652 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866370.3190722-CDS-A-nodosum_M_contig10113:11488..11565 | 1680866370.3190722-CDS-A-nodosum_M_contig10113:11488..11565 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10113 11489..11565 - |
| 1680866370.3299255-CDS-A-nodosum_M_contig10113:11574..11599 | 1680866370.3299255-CDS-A-nodosum_M_contig10113:11574..11599 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig10113 11575..11599 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10113.14.1 >prot_A-nodosum_M_contig10113.14.1 ID=prot_A-nodosum_M_contig10113.14.1|Name=mRNA_A-nodosum_M_contig10113.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=34bp
MAYRFYVVSPLHRQRFTAVQQCIFENKEKSDRI* back to topmRNA from alignment at A-nodosum_M_contig10113:11485..11652- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig10113.14.1 ID=mRNA_A-nodosum_M_contig10113.14.1|Name=mRNA_A-nodosum_M_contig10113.14.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=168bp|location=Sequence derived from alignment at A-nodosum_M_contig10113:11485..11652- (Ascophyllum nodosum dioecious)
CACATCCACACTACTACTCGCAGGTTTACTCCAGGACCTACAGAGCTGCC
TTAATGGCGTATCGATTCTACGTGGTGTGTGGAACAGCGCCGCTGCACCG
GCAGAGGTTCACCGCGGTGCAGCAGTGCATTTTTGAAAACAAAGAAAAAT
CTGACCGCATCTAAACCT back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig10113:11485..11652- >mRNA_A-nodosum_M_contig10113.14.1 ID=mRNA_A-nodosum_M_contig10113.14.1|Name=mRNA_A-nodosum_M_contig10113.14.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=102bp|location=Sequence derived from alignment at A-nodosum_M_contig10113:11485..11652- (Ascophyllum nodosum dioecious)
ATGGCGTATCGATTCTACGTGGTGTCGCCGCTGCACCGGCAGAGGTTCAC
CGCGGTGCAGCAGTGCATTTTTGAAAACAAAGAAAAATCTGACCGCATCT
AA back to top
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