mRNA_A-nodosum_M_contig10100.1.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig10100.1.1
Unique NamemRNA_A-nodosum_M_contig10100.1.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig10100.1.1 vs. uniprot
Match: A0A6H5KKZ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ1_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 3.890e-89
Identity = 212/531 (39.92%), Postives = 262/531 (49.34%), Query Frame = 1
Query:   28 ERQHEAVRVRQERQIAFLKEGVGGPSGMMT-AHRNRGLGLPLEVIISAKQTGARHAGTGGSFAVLA---------------------------------------VSATSPAGSAVTNLPENYALEVHPLETVGSLRKRMAAVNGFGSLSEFTRLTCG-KTLSGDTQTMLEVGVTDGTGIWTI---------LSAASAQGVVRASQMERHPMGETER-------------------HYGDVIAGQSVLFDELFRLLECARGLKDHAITQAIWDLLMSLPTECELVLRVRETAIVTAAANAADAPEVTVDSEGPSPKEEDGDREGGKNDAERSTVPPTSKEFHGGDSGPGDRSDVISAAGAWATLLPVERNWHKTVYTLQIIDALLLPASQVLGVKPWSPDTDAFRSEFLRGGGFARVLNFVMTAPDDGDRHTVLGHASATRIIKTCLFYPPLQVLTTRHDHRAAARXXXXXXXXXXVGGISFGSSPDEVI----LIPRALPPMSPPSAETREAMKVAESDLHCLLNKLVLV 1401
            ER+ +AVRVR ER +  ++  + G  G+MT AH NRG+GLP EV +  K T  +H GT  + A                                          + AT+ + +  +  PE + LEVHPLETVGSLR R+A  N  G  ++FTRL  G KT+  D  T+ + G+ DG  +WT+         +S   + G  +    ER  + E  R                   H GDVIA QS  F+ELFRLLECA GL+D  IT+A+WDLLMSLPT+ EL  RV+ETA+ TA                                                  G G  +       AWA LLP+ERNWHKTVYTLQIIDALLLPA QVLG  PW+ +TD FRS FL+GGGFARVL   M AP +GDR   LGHAS  RI+KTCLFYPPLQVLT +       R                   P        L+ RALPPM+PP    R AM V ++DL  LL+KLVLV
Sbjct: 1153 EREEQAVRVRLERCLGLVQGVIRGAPGIMTPAHSNRGMGLPWEVTVLVKTTATKHLGTSPAVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPATAASHAWTSGPPERFLLEVHPLETVGSLRARVA--NSAGQAADFTRLLSGGKTIQVDAATVADAGIKDGAILWTLPSPTALIRGVSVGGSAGHQQQXXAERLRLEELARRXXXXXXXXXGGAGAGVVAHDGDVIARQSGPFEELFRLLECAHGLQDSTITKAVWDLLMSLPTQYELARRVKETALATAXXX--------------------------XXXXXXXXXXXXXXXXXXXXXGAGGANGPSVGPAAWAELLPLERNWHKTVYTLQIIDALLLPAPQVLGAVPWAAETDEFRSGFLQGGGFARVLEVAMAAPTNGDRDVTLGHASVLRILKTCLFYPPLQVLTPQAPRVGRGREGHGSGGTGMRKAAGAAXXPXXXAGGANLVARALPPMAPPCPAARAAMDVPDADLQQLLDKLVLV 1655          
BLAST of mRNA_A-nodosum_M_contig10100.1.1 vs. uniprot
Match: D8LIA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA1_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 9.030e-81
Identity = 198/424 (46.70%), Postives = 234/424 (55.19%), Query Frame = 1
Query:  241 AGSAVTNLPENYALEVHPLETVGSLRKRMAAVNGFGSLSEFTRLTCG-KTLSGDTQTMLEVGVTDGTGIWTILSAASAQGVVRASQMERHPMGE--------------------------------TERHYGDVIAGQSVLFDELFRLLECARGLKDHAITQAIWDLLMSLPTECELVLRVRETAIVTAAANAADAPEVTVDSEGPSPKEEDGDREGGKNDAERSTVPPTSKEFHGGDSGPGDRSDVISAAGAWATLLPVERNWHKTVYTLQIIDALLLPASQVLGVKPWSPDTDAFRSEFLRGGGFARVLNFVMTAPDDGDRHTVLGHASATRIIKTCLFYPPLQVLTTRHDHRAAARXXXXXXXXXXVGGISFGSSPDEVI----LIPRALPPMSPPSAETREAMKVAESDLHCLLNKLVLV 1401
            A SA  +L E + LEVHPLETVGSLR R+A+    G  ++FTRL  G KT+  D  T+ + G+ DG  +WT+ S  +    V       H                                       H GDVIA QS  F+ELFRLLECA GL+D AIT+A+WDLLMSLPT+ EL  RV+ETA+ TAA            +EGPS  EE+                  ++E  GG +GPG       A  AWA LLP+ERNWHKTVYTLQIIDALLLPA QVLG  PW+ +TD FRS FL+GGGFARVL   M AP DGDR   LGHAS  RI+KTCLFYPPLQVLT +       R XXXXXXXXX                  L+ RALPP        R AM V ++DL  LL+KLVL+
Sbjct:  443 ADSATNDLLERFLLEVHPLETVGSLRARVAS--SAGQAADFTRLLSGGKTIQVDAATVADAGIKDGASLWTLPSPTALIRGVSVGGSAGHQQXXXXXXLRLEXXXXXXXXXXXXXXXXXXXXAGAGVAAHDGDVIARQSGPFEELFRLLECAHGLQDPAITKAVWDLLMSLPTQYELARRVKETALATAAXXXXXV------TEGPSAMEEEDVG--------------AAEERAGGANGPG------VAPAAWAELLPLERNWHKTVYTLQIIDALLLPAPQVLGAVPWAAETDEFRSGFLQGGGFARVLEVAMAAPTDGDRDVTLGHASVLRILKTCLFYPPLQVLTPQAPRVGRGRDXXXXXXXXXRKATGXXXXXXXXXXXXNLVARALPPXXXXXXAARAAMDVPDADLQQLLDKLVLI 838          
BLAST of mRNA_A-nodosum_M_contig10100.1.1 vs. uniprot
Match: A0A7R9Z4I7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z4I7_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.460e-12
Identity = 105/397 (26.45%), Postives = 161/397 (40.55%), Query Frame = 1
Query:  121 HRNRGLGLPLEVIISAKQTGARHAGTGGSFAVLAVSATSPA---GSAVTNLPENYALEVHPLETVGSLRKRMA-------------AVNGFG-SLSEFTRLTCGKT---LSGDTQTMLEVGVTDGTGIWTILSAASAQGVVRA-----SQMERHPMGETERHYGDVIAGQSV-LFDELFRLLEC--ARGLKDHAITQA--------IWDLLMSLPTECELVLRVRETAIVTAAANAADAPEVTVDSEGPSPKEEDGDREGGKNDAERSTVPPTSKEFHGGDSGPGDRSDVISAAGAWATLLPVERNWHKTVYTLQIIDALLLPASQVLGVKP----------WSPDTDAFRSEFLRGGGFARVLNF-VMTAPDDGDRH--TVLGHASATRIIKTCLF 1164
            H  RG G    + I AK+  A       S  V  +S+TS A   G       E ++L VHPLET+GS++ ++A              V+G G S S  +    G+       +   + ++G+T+G  I  +L++        A     S  + H +  +E   GD     +   FD L  +LE    R + D   +          +WDLL+S+P+   +V RVR +A                                G+N  ER               G G   D       W+TLL + R +H++VY +Q+ID+ L P+ ++L + P             D  AFR  F+  GGF  V+ F + +  D G+R   T +G A A RI+K C F
Sbjct:  210 HGMRGQGGYRTIGIMAKR--APQTAVANSVGVPQLSSTSTATQIGPGKLPSSERFSLNVHPLETLGSVKAKVAKHCNHDISLVKPLTVSGRGVSYSLRSNGEPGQANLNQESEESVVAQLGITEGCEIVFLLASQKLPDHTPAPSAKLSSKKGHGLDLSEIFVGDGSRDSADRFFDTLLSVLEALPVRAVVDSGDSSVQSVDAHKLVWDLLLSMPSNRGIVDRVRSSA--------------------------------GRNAPERMR------------DGEGMVLDAPRGDAVWSTLLDI-RCFHRSVYIMQVIDSFLQPSQEILSILPREKFVTLSDVMKSDAVAFRQGFIESGGFDAVMKFFISSGRDSGERRKKTQMGSAVALRILKCCFF 559          
BLAST of mRNA_A-nodosum_M_contig10100.1.1 vs. uniprot
Match: A0A5D6XIP1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIP1_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.600e-12
Identity = 100/339 (29.50%), Postives = 145/339 (42.77%), Query Frame = 1
Query:  211 AVLAVSA-TSPAGSAVTNLPENYALEVHPLETVGSLRKRMAAVNGFGSLSEFTRLTCGKTLSGDTQTMLEVGVTDGTGIWTILSAASAQ-GVVRASQMERHPM----------------GETERHYGDVIAGQSVLFDELFRLLECARGLKDHAITQAIWDLLMSLPTECELVLRVRETAIVTAAANAADAPEVTVDSEGPSPKEEDGDREGGKNDAERSTVPPTSKEFHGGDSGPGDRSDVISAAGAWATLLPVERNWHKTVYTLQIIDALLLPASQVLGVKPWSPDTDAFRSEFLRGGGFARVLNFVMTAPDDGDRHTVL---GHASATRIIKTCLF 1164
            AV A SA  SP+GS   N   +  + V+  +T+   RK++  V G   L +   L+ G  +SGD +T+ E+ +++ T +  +L  +  Q G + AS+ + HPM                     H G VIA     F+ LFR+L+   G   HA+  ++W+ L  +PT  EL+ RV                                    G  D+  ST          GD+  G   D       W++LL    + HK VYTLQI+DALLLPA         S     +   F+ GGGF  VL++ + A    + HT     G A A RI+K CLF
Sbjct:  996 AVAASSAGVSPSGSQ-ENAIRSAQVVVYANQTLWLFRKQLEKVVGH-PLQQTKILSSGSAVSGDHKTLAELNISETTELRVLLFNSIVQRGSLSASEQD-HPMMPFGAEPSSSSLSGXXXXXXHHPGAVIARDGSYFEILFRILDTVAG---HAVHASLWNFLKKIPTAAELLDRVSHI---------------------------------GLQDSWDSTDDVGMSSLSNGDAN-GQTED-------WSSLLKTASH-HKAVYTLQIMDALLLPADNAKIAFARS-----YLRRFIHGGGFHEVLSYFVKA----NFHTSSFNEGAAVALRILKFCLF 1277          
BLAST of mRNA_A-nodosum_M_contig10100.1.1 vs. uniprot
Match: K3X8D4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8D4_GLOUD)

HSP 1 Score: 75.9 bits (185), Expect = 9.510e-11
Identity = 96/354 (27.12%), Postives = 144/354 (40.68%), Query Frame = 1
Query:  115 TAHRNRGLGLPLEVIISAKQTGARHAGTGGSFAVLAVSATSPAGSAVTNLPENYALEVHPLETVGSLRKRMAAVNGFGSLSEFTRLTCGKTLSGDTQTMLEVGVTDGTGIWTILSAASAQGVVRASQMERHPMG---ETERHYGDVIAGQSVLFDELFRLLECARGLKDHAITQAIWDLLMSLPTECELVLRVRETAIVTAAANAADAPEVTVDSEGPSPKEEDGDREGGKNDAERSTVPPTSKEFHGGDSGPGDRSDVISAAGA-WATLLPVERNWHKTVYTLQIIDALLLPASQVLGVKPWSPDTDAFRSEFLRGGGFARVLNFVMTAPDDGDRHTVLGHASATRIIKTCLF 1164
            TAH   G G    V I A++     +  GG      V   SP GS   ++    A  V+  +T+   RK++  V G   L +   L+ G  +SGD +T+ E+ + + T +  ++       V+   Q +  P G       H G +IA     F+ LFR+L+   G   H +   +W+ L  +PT  EL+ +V    I                            +E   +D                DS  G+ +  ++     W++LL  E   HK VYTLQI+DALLLPA         S     +   F+ GGGF  VL++ + A          G A A RI+K CLF
Sbjct:  127 TAHGMAGRGAYFNVKIIAQRIPTSSSSGGGGMGGPNV---SPGGSHDNSIRTTQAT-VYANQTLWQFRKQLEKVVGH-PLQQTKILSGGAAISGDQKTLAELNINETTELRVLMFNTV---VMAYDQDQMVPPGIDAVPAHHPGSIIARNGSYFEILFRVLDIVEGNSVHNL---LWEFLKKIPTATELLDQVSNIGI----------------------------QENWDDDVVM-------------DSPVGETNGTMNGTTEDWSSLLKTESQ-HKAVYTLQIMDALLLPADSTKIAFARS-----YLRRFIHGGGFHEVLSYFIKADFHASSFNE-GAAVALRILKFCLF 421          
BLAST of mRNA_A-nodosum_M_contig10100.1.1 vs. uniprot
Match: M4BN22_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN22_HYAAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.840e-9
Identity = 90/359 (25.07%), Postives = 149/359 (41.50%), Query Frame = 1
Query:  169 KQTGARH--AGTGGSFAVLAV------SATSPAGSAVT------NLPENYALEVHPLETVGSLRKRMAAVNGFGSLSEFTRLTCGKTLSGDTQTMLEVGVTDGTGIWTILSAASAQGVVRASQMERH-------------PMGETERHYGDVIAGQSVLFDELFRLLECARGLKDHAITQAIWDLLMSLPTECELVLRVRETAIVTAAANAADAPEVTVDSEGPSPKEEDGDREGGKNDAERSTVPPTSKEFHGGDSGPGDRSDVISAAGAWATLLPVERNWHKTVYTLQIIDALLLPASQVLGVKPWSPDTDAFRSEFLRGGGFARVLNFVMTAPDDGDRHTVLGHASATRIIKTCLF 1164
            KQT   H  +G G  F V  +      S TS  GS+ T      N      + V+  +T+   RK++  +    +      L+ G  +SGD +T+ ++ +T+ + +  ++  +  Q     +  + H             P    ++H G V+A  +  F+ LFR+L+   G   H++ + +W  L  +PT  EL+ RV +            A E++                    D   +T  P S           DR     +   W++LL    + H+ +YTLQI+DALLLP S++  +    P    +   F+ GGGF  VL++ + A          G A A RI+K CLF
Sbjct:  933 KQTFVPHGLSGRGAYFTVKVIAQRIPSSNTSGPGSSATAVSNHDNAVRTMQVSVYSNQTLSLFRKQIEKLVSHPT-ERAKILSSGSAISGDHKTLADLQITESSEVRVLMFNSVVQRSGSNAMDQDHLMASSGNGSPTYPPSSSFKQHPGLVVARDASYFETLFRVLDVVEG---HSVHELLWAFLKQIPTSDELLNRVSDIG----------AAEMS--------------------DEHVNTSLPLS-----------DRPAKKGSESNWSSLLKSISS-HQAIYTLQIMDALLLP-SEIAKI----PFAQTYLQRFISGGGFHEVLSYFIGANFHESSFNE-GAAVALRILKFCLF 1239          
BLAST of mRNA_A-nodosum_M_contig10100.1.1 vs. uniprot
Match: A0A662X9W0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9W0_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.780e-9
Identity = 69/298 (23.15%), Postives = 119/298 (39.93%), Query Frame = 1
Query:  298 ETVGSLRKRMAAVNGFGSLSEFTRLTCGKTLSGDTQTMLEVGVTDGTGIWTIL---------SAASAQGVVRASQMERHPMGETERHYGDVIAGQSVLFDELFRLLECARGLKDHAITQAIWDLLMSLPTECELVLRVRETAIVTAAANAADAPEVTVDSEGPSPKEEDGDREGGKNDAERSTVPPTSKEFHGGDSGPGDRSDVISAAGAWATLLPVERNWHKTVYTLQIIDALLLPASQVLGVKPWSPDTDAFRSEFLRGGGFARVLNFVMTAPDDGDRHTVLGHASATRIIKTCLF 1164
            +T+   RK++  + G   + +   ++ G  ++GD +++ ++ +T+ + +  ++         +    Q  V  S  +      +  H G VIA     FD LFR+L+   G   H + + +W  L  +P+  +L+ RV     V                            E G +D   S            D    D   +      W++L+    + H+ +YTLQI+DALLLP+          P    +   F+ GGGF  VL++ + A          G A A RI+K CLF
Sbjct: 1013 QTLWQFRKQLEKLVGH-PMQQMKIISSGSAITGDQKSLADLQITESSELRVLMFNTIVQRSNTTLMDQDQVMTSDGKDAASASSSHHPGQVIARDGTYFDILFRVLDLVEG---HPVHELLWAFLKKIPSSVKLLSRVSSIGAV----------------------------EVGDDDVTMSAP---------SDEADSDGDAMAQGKADWSSLVKGISS-HQAIYTLQIMDALLLPSDAAK-----IPFAQTYLQRFISGGGFHEVLSYFINANFHESSFNE-GAAVALRILKFCLF 1262          
BLAST of mRNA_A-nodosum_M_contig10100.1.1 vs. uniprot
Match: A0A1Z5K2Z6_FISSO (Ubiquitin carboxyl-terminal hydrolase 9/24 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2Z6_FISSO)

HSP 1 Score: 69.7 bits (169), Expect = 8.660e-9
Identity = 87/341 (25.51%), Postives = 137/341 (40.18%), Query Frame = 1
Query:  274 YALEVHPLETVGSLRKRMA-------------AVNGFG-----SLSEFTRLTCGKTLSGDTQTMLEVGVTDGTG-IWTILSAASAQGV-VRASQMERHPMGETERHYGDVIAGQSVLFDELF-RLLECA-------RGLKDHAIT----QAIWDLLMSLPTECELVLRVRETAIVTAAANAADAPEVTVDSEGPSPKEEDGDREGGKNDAERSTVPPTSKEFHGGDSGPGDRSDVISAAGAWATLLPVERNWHKTVYTLQIIDALLLPASQVLGVKP----------WSPDTDAFRSEFLRGGGFARVLNFVMTAPDDGDRHTVL--GHASATRIIKTCLF 1164
            ++LEVHPLET+GSL+ ++A              +NG G            +     ++ D  TM E+GV  G   ++T+    S     V  +Q  R   G    +   V    S   ++L  RLL          RG    A++    + +WDLL+++PT+  +  +V     V+                                               GGDS   D  +V S+  AW+ L+ V R +  +VYTL  ID+ L PA + L + P          +  ++ AFR  F+ GGGF+ V+ F   +     R   +  G+A A R++K+CLF
Sbjct: 1000 FSLEVHPLETLGSLKGKIAYKCKCPLASVKPVQINGRGVGVGLRYQPADPVPVSVNIAADDITMDELGVVHGCELVFTVSERISTVDTPVPPAQASR---GAFPSNLSSVFFDDSCFAEKLHGRLLSLLAAPPSDERGASQTAVSPLTQKLVWDLLLAMPTDSVVANKVMSIHNVS-----------------------------------------------GGDS-VSDPMEVDSSGDAWSQLIDV-RTFDSSVYTLMTIDSFLQPAPEALSLLPHDQRTAHGVKYIENSGAFRRAFIDGGGFSAVVQFFSASYGGSTRQDKVRRGNAVALRVLKSCLF 1288          
BLAST of mRNA_A-nodosum_M_contig10100.1.1 vs. uniprot
Match: G4ZD97_PHYSP (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=G4ZD97_PHYSP)

HSP 1 Score: 67.8 bits (164), Expect = 3.460e-8
Identity = 80/331 (24.17%), Postives = 133/331 (40.18%), Query Frame = 1
Query:  220 AVSATSPAGSAVTNLPENYALEVHPLETVGSLRKRMAAVNGFGSLSEFTRLTCGKTLSGDTQTMLEVGVTDGTGIWTIL---------SAASAQGVVRASQMERHPMG----ETERHYGDVIAGQSVLFDELFRLLECARGLKDHAITQAIWDLLMSLPTECELVLRVRETAIVTAAANAADAPEVTVDSEGPSPKEEDGDREGGKNDAERSTVPPTSKEFHGGDSGPGDRSDVISAAGA---WATLLPVERNWHKTVYTLQIIDALLLPASQVLGVKPWSPDTDAFRSEFLRGGGFARVLNFVMTAPDDGDRHTVLGHASATRIIKTCLF 1164
            A  A++ A S+  N         +  +T+   RK++  + G   + +   L+ G  ++GD +T+ ++ +T+ + +  ++         S    Q  V  S  +  P       ++ H G VIA  +  F  LFR+L+   G   H++ + +W  L  +PT  EL+ RV                                                 + E   GD      SD  +  G    W++L+    + H+ +YTLQI+DALLLP S V  +    P    +   F+ GGGF  VL++ ++A          G A A RI+K CLF
Sbjct:  973 AAGASATANSSQDNAVRTMQASAYSNQTLWLFRKQIEKLVGH-PMQQTKILSSGSAITGDQKTLADLQITESSELRVLMFNSVVQRSSSNLMDQDQVMTSAGKESPTSPSSLSSQHHPGLVIARDASYFGILFRVLDIVEG---HSVHELLWAFLKQIPTSEELLNRVSSIG---------------------------------------------ASETSDGDVAMNSPSDEPANGGTKPDWSSLVKGISS-HQAIYTLQIMDALLLP-SDVAKI----PFAQTYLQRFISGGGFHEVLSYFISANFHESSFNE-GAAVALRILKFCLF 1247          
BLAST of mRNA_A-nodosum_M_contig10100.1.1 vs. uniprot
Match: A0A7S2XLE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLE7_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 4.100e-8
Identity = 44/112 (39.29%), Postives = 58/112 (51.79%), Query Frame = 1
Query:  862 PGDRSDVISAAGA-WATLLPVERNWHKTVYTLQIIDALLLPASQVLGV----------KPWSPDTDAFRSEFLRGGGFARVLNFVMTAPDDGDRHTVLGHASATRIIKTCLF 1164
            P D   V S  G  W TLL    N+H++VY +++ID+ L PA ++L            K    D  AFRS F+  GGF  VL F M   D G + T +G+A A RI+K C F
Sbjct: 1289 PVDSMVVDSPQGEEWRTLLD-GTNFHRSVYVMRVIDSFLQPAPEILTSLTPATASALQKQMYDDAAAFRSGFINSGGFDAVLRFFM---DSGKKQTQMGNAFALRILKCCFF 1396          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10100.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5KKZ1_9PHAE3.890e-8939.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LIA1_ECTSI9.030e-8146.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9Z4I7_9STRA1.460e-1226.45Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A5D6XIP1_9STRA2.600e-1229.50Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3X8D4_GLOUD9.510e-1127.12Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
M4BN22_HYAAE2.840e-925.07Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A662X9W0_9STRA4.780e-923.15Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
A0A1Z5K2Z6_FISSO8.660e-925.51Ubiquitin carboxyl-terminal hydrolase 9/24 n=2 Tax... [more]
G4ZD97_PHYSP3.460e-824.17Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A7S2XLE7_9STRA4.100e-839.29Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10100contigA-nodosum_M_contig10100:11075..13602 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LIA1
PFAMsUCH
Model size1416
Max annot lvl2759|Eukaryota
KEGG koko:K11840,ko:K11869
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.48e-81
EggNOG OGsCOG5077@1|root,KOG1866@2759|Eukaryota
EC3.4.19.12
Descriptionubiquitinyl hydrolase activity
Cds size1416
COG categoryO
BRITEko00000,ko01000,ko01002,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866369.5997674-CDS-A-nodosum_M_contig10100:11074..116831680866369.5997674-CDS-A-nodosum_M_contig10100:11074..11683Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10100 11075..11683 +
1680866369.6102667-CDS-A-nodosum_M_contig10100:12250..126281680866369.6102667-CDS-A-nodosum_M_contig10100:12250..12628Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10100 12251..12628 +
1680866369.6183498-CDS-A-nodosum_M_contig10100:13173..136021680866369.6183498-CDS-A-nodosum_M_contig10100:13173..13602Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10100 13174..13602 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10100.1.1prot_A-nodosum_M_contig10100.1.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig10100 11075..13602 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig10100.1.1

>prot_A-nodosum_M_contig10100.1.1 ID=prot_A-nodosum_M_contig10100.1.1|Name=mRNA_A-nodosum_M_contig10100.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=472bp
ANSECTEAEERQHEAVRVRQERQIAFLKEGVGGPSGMMTAHRNRGLGLPL
EVIISAKQTGARHAGTGGSFAVLAVSATSPAGSAVTNLPENYALEVHPLE
TVGSLRKRMAAVNGFGSLSEFTRLTCGKTLSGDTQTMLEVGVTDGTGIWT
ILSAASAQGVVRASQMERHPMGETERHYGDVIAGQSVLFDELFRLLECAR
GLKDHAITQAIWDLLMSLPTECELVLRVRETAIVTAAANAADAPEVTVDS
EGPSPKEEDGDREGGKNDAERSTVPPTSKEFHGGDSGPGDRSDVISAAGA
WATLLPVERNWHKTVYTLQIIDALLLPASQVLGVKPWSPDTDAFRSEFLR
GGGFARVLNFVMTAPDDGDRHTVLGHASATRIIKTCLFYPPLQVLTTRHD
HRAAARGRGRGSGGGGVGGISFGSSPDEVILIPRALPPMSPPSAETREAM
KVAESDLHCLLNKLVLVRGEV*
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mRNA from alignment at A-nodosum_M_contig10100:11075..13602+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig10100.1.1 ID=mRNA_A-nodosum_M_contig10100.1.1|Name=mRNA_A-nodosum_M_contig10100.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2528bp|location=Sequence derived from alignment at A-nodosum_M_contig10100:11075..13602+ (Ascophyllum nodosum dioecious)
GCGAATAGCGAATGCACCGAAGCGGAAGAACGGCAACATGAAGCCGTGCG GGTGCGCCAGGAACGCCAAATAGCGTTCCTCAAGGAGGGCGTCGGCGGCC CTTCCGGGATGATGACCGCTCACCGGAACCGCGGCCTGGGGCTCCCCTTG GAGGTGATTATATCGGCGAAGCAAACAGGGGCAAGGCACGCCGGCACCGG CGGAAGTTTCGCCGTGTTGGCGGTGTCCGCCACATCGCCGGCCGGATCGG CCGTGACCAATTTGCCGGAGAACTACGCTCTCGAGGTGCATCCGCTGGAG ACGGTTGGGTCGCTCAGGAAACGGATGGCGGCGGTAAACGGTTTTGGCTC TCTGTCGGAGTTTACCCGACTTACATGCGGCAAAACGCTCTCTGGGGACA CGCAGACGATGCTGGAGGTCGGCGTCACAGATGGGACGGGTATCTGGACC ATCTTGAGCGCGGCCTCTGCGCAGGGGGTCGTGCGTGCTTCCCAGATGGA GAGGCACCCGATGGGCGAAACAGAGCGGCACTATGGTGACGTTATCGCTG GGCAGAGTGTACTGTTCGACGAACTGTTTCGGCTGTTGGAGTGCGCGCGT GGGCTCAAGGTGTGTGTATGTGTATGTGTGTGCGTGTGTGTTTTCCTGGC TTTTGTGTGTCTTATACTATGTGGCTGTGTGTGTGAATTTGACTGTTTAA AAAATGACTTGAAGGTTCGTTCGTTTTGCCTTGCCTTGCCTCTGATACTG CGCCCGTGTATCGGGCGGTTCAGTATTATATACGAAGAAGTTAACTGGCT CGTACATTCTACGAGGTGGTTTTGTTTTCTTAGTTTTGAATACGTGCCGT GCCGTGCCGTGCCGTGCCGTGCCGTGCCGTGCCGTGCCGTGCCGTGCCGT GCCGTCGTCCGGTTTTTGTTTTTGCGAGTGTTAAGTGTTAGTATTACTGC CGTGTGTGCCTGCAGCGAAGTTGTGCAGCTTACGATCAATCGCAAGACGC CTTTGAATACGTGCAGTTGATGGGGGAGCTTGAAATATTTACACGCCTTC TCTAGGTATGTACAACTCCTCCCTCCCTCTCTCCCTCTCTCTCTCCTCCG CCGCCTCCGAATATCAACATCCGCCTTTTGTTATTTTTTCCCTTCGTATG CTTTTTTTTCGCTCTTGTCTTGCAAGGACCACGCTATCACCCAGGCCATA TGGGATCTGCTCATGTCGTTGCCGACCGAATGTGAACTGGTTCTTCGAGT GAGGGAGACCGCGATCGTAACAGCCGCCGCCAATGCCGCCGATGCCCCCG AGGTCACCGTGGACTCTGAGGGACCCTCTCCTAAGGAAGAGGATGGGGAT AGGGAAGGGGGCAAGAACGATGCCGAGAGGTCGACGGTGCCCCCGACCAG CAAGGAGTTCCACGGGGGGGATTCGGGGCCTGGGGACAGAAGTGATGTGA TTTCCGCGGCGGGGGCGTGGGCGACGTTGTTGCCCGTGGAGCGGAACTGG CACAAGACGGTATACACGCTACAGATCATCGACGCACTTCTTCTGCCCGC CTCGGTGGGTGTGCTCTCGCATGGCGGGTTTTGGAATACTGTATTAAAAT AGTAGACTTTTGGTGTTGGTGGAATGGAGCCACACGGCTCCGCACAAGTA tgTGTGTTTGGGGTTTGCACAAGAAGCTTGGGCGGGTGGATGTTCAGGTA TTAATATTAATATTATTAGTAATAGTCCAACAGCATGCGAAGAGAAGACC CTACCGTCAGAGAGTAGCGGCGGACAACTCGACAACTCCGATCCTAAAGA CAAAACAGGGTATCTCCAGAGCTGTTATAGACTGTAATGTAAGTCTTTTA TTATACGACACGTCCACTCTGGAGAAGGAAAATTAGCTCACGAACTATTA ATAAAAACCCAGTGATCGTTTACGCATTTCTTCTTCTGTCTTGCGTCTCT CTGTTCTCTTCAACCATTTGTTTTCCCCTTTTCTATTTCCTTTTTTTCCA TTACCCCCCCATCTACCTCCCACGCAGAAGTATGCCCTCCACCACCAACC CTTCCTCCTTAACCCTTTCCCTCTCCTCCTCCCTCTCCCTCTTTgGCAGC AAGTGCTTGGCGTGAAGCCGTGGTCCCCGGACACCGACGCATTCCGATCC GAATTTCTGCGGGGCGGGGGCTTCGCCCGCGTCCTGAATTTCGTCATGAC CGCCCCGGACGACGGCGACCGCCACACCGTCCTAGGCCACGCGTCGGCGA CCCGTATCATCAAGACCTGCCTCTTCTACCCTCCGCTACAAGTCTTGACG ACGAGGCACGACCACCGCGCCGCCGCTCGAGGCAGAGGGCGGGGAAGCGG AGGCGGAGGCGTGGGCGGGATTTCGTTCGGGTCATCCCCAGATGAAGTAA TCCTCATCCCGAGAGCGCTGCCGCCGATGTCGCCTCCTTCCGCGGAGACT CGGGAGGCGATGAAAGTCGCGGAGTCAGACCTCCACTGCCTGCTGAACAA GCTAGTTTTGGTGAGGGGAGAGGTTTGA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig10100:11075..13602+

>mRNA_A-nodosum_M_contig10100.1.1 ID=mRNA_A-nodosum_M_contig10100.1.1|Name=mRNA_A-nodosum_M_contig10100.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1416bp|location=Sequence derived from alignment at A-nodosum_M_contig10100:11075..13602+ (Ascophyllum nodosum dioecious)
GCGAATAGCGAATGCACCGAAGCGGAAGAACGGCAACATGAAGCCGTGCG
GGTGCGCCAGGAACGCCAAATAGCGTTCCTCAAGGAGGGCGTCGGCGGCC
CTTCCGGGATGATGACCGCTCACCGGAACCGCGGCCTGGGGCTCCCCTTG
GAGGTGATTATATCGGCGAAGCAAACAGGGGCAAGGCACGCCGGCACCGG
CGGAAGTTTCGCCGTGTTGGCGGTGTCCGCCACATCGCCGGCCGGATCGG
CCGTGACCAATTTGCCGGAGAACTACGCTCTCGAGGTGCATCCGCTGGAG
ACGGTTGGGTCGCTCAGGAAACGGATGGCGGCGGTAAACGGTTTTGGCTC
TCTGTCGGAGTTTACCCGACTTACATGCGGCAAAACGCTCTCTGGGGACA
CGCAGACGATGCTGGAGGTCGGCGTCACAGATGGGACGGGTATCTGGACC
ATCTTGAGCGCGGCCTCTGCGCAGGGGGTCGTGCGTGCTTCCCAGATGGA
GAGGCACCCGATGGGCGAAACAGAGCGGCACTATGGTGACGTTATCGCTG
GGCAGAGTGTACTGTTCGACGAACTGTTTCGGCTGTTGGAGTGCGCGCGT
GGGCTCAAGGACCACGCTATCACCCAGGCCATATGGGATCTGCTCATGTC
GTTGCCGACCGAATGTGAACTGGTTCTTCGAGTGAGGGAGACCGCGATCG
TAACAGCCGCCGCCAATGCCGCCGATGCCCCCGAGGTCACCGTGGACTCT
GAGGGACCCTCTCCTAAGGAAGAGGATGGGGATAGGGAAGGGGGCAAGAA
CGATGCCGAGAGGTCGACGGTGCCCCCGACCAGCAAGGAGTTCCACGGGG
GGGATTCGGGGCCTGGGGACAGAAGTGATGTGATTTCCGCGGCGGGGGCG
TGGGCGACGTTGTTGCCCGTGGAGCGGAACTGGCACAAGACGGTATACAC
GCTACAGATCATCGACGCACTTCTTCTGCCCGCCTCGCAAGTGCTTGGCG
TGAAGCCGTGGTCCCCGGACACCGACGCATTCCGATCCGAATTTCTGCGG
GGCGGGGGCTTCGCCCGCGTCCTGAATTTCGTCATGACCGCCCCGGACGA
CGGCGACCGCCACACCGTCCTAGGCCACGCGTCGGCGACCCGTATCATCA
AGACCTGCCTCTTCTACCCTCCGCTACAAGTCTTGACGACGAGGCACGAC
CACCGCGCCGCCGCTCGAGGCAGAGGGCGGGGAAGCGGAGGCGGAGGCGT
GGGCGGGATTTCGTTCGGGTCATCCCCAGATGAAGTAATCCTCATCCCGA
GAGCGCTGCCGCCGATGTCGCCTCCTTCCGCGGAGACTCGGGAGGCGATG
AAAGTCGCGGAGTCAGACCTCCACTGCCTGCTGAACAAGCTAGTTTTGGT
GAGGGGAGAGGTTTGA
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