|
|
Homology
BLAST of mRNA_A-nodosum_M_contig101.24.1 vs. uniprot
Match: D7G086_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G086_ECTSI) HSP 1 Score: 239 bits (611), Expect = 1.960e-60 Identity = 233/695 (33.53%), Postives = 295/695 (42.45%), Query Frame = 2
Query: 197 EDVPAAVEAVLRWCWTITGGRRLAHVVMTAPQSMVMDGSLVLVKTFLNDGRPSPGMIRVVGLDAPDVKVTERRFRTRLDRSTKPADDGADVDADAEEEGTKDGGLERAMALCMELVHGEGCGVAEEANVVLRRAVSVDEGKNGKYKGNQTSSRLAVALNGALEGIALEAWRRAAAAVSXXXXXXXTDSMKMKLTMASXXXXXXXXXXXXXXXXXXXLHAMESSPATGDLPYRRASSQEWAHSGV-------------------------------QVDDYDRLEATESLTRVEHEHE-------------------------EAYXXXXXXXXXXQRYGVRGNGA-----------PGVVFGAE-----GVHCAGSVSDVSSVEAAMAATPL-----------------------------------------GRLVKLMGELAGGEKVTVGRAVSVLNGDGKALGRLLDLGVLRLSPQTISGAMSAVRAD----------------------------------DARSSDVLPEADEAFQVGAATPVMAGVFAILQGCSGLEEQAIARAMRVL-RGGNPDGHATELA-----------------DHEEWQAYREAAMAGLVRKAMLGYGGAV------------------------------GPADTAATSA--SRRLQVAMAAVGCMVTRREI 1690
EDVPAAVEAVLRWCWTITGGRRLAHVV+ APQS+ +DGSLV VK FLNDGR +PGM+RV+ L+APD V ERRFR+R + + G A EEG ERA+ LCMELVH EGC VA+EAN +L R D+ + +++RLA L +L+G ALEAWRR AAV + + + + ++G +R + + A SGV VDD + A + E E EA Q+ ++ G P + +E G V EA + P+ GRLV+L+GELA G KV+V AV+ L+GDGKAL RLLDLGVLRL PQT S ++ A R D + S+DVL EA AFQVGAATP+MAGVF+IL+GC G+EEQAIA A+ L RGGN + + EEWQA+REA+MA LV +AM G + ++TSA +RRLQ A+AAVGCM T EI
Sbjct: 164 EDVPAAVEAVLRWCWTITGGRRLAHVVLIAPQSLAVDGSLVRVKGFLNDGRLAPGMMRVIALNAPDSSVIERRFRSRFAAAPQQPTQGG-----AGEEG------ERAVTLCMELVHREGCSVADEANEILTRTDFSDDSPD-----KLSAARLA--LEESLDGFALEAWRRVGAAVESTAAIAPRGFAGTDAVVGTPGAVSSAALASNQRAPVPP--STSAGGSSGATSAKRNTQEGRAESGVTRTRTSXXXXXXXXXXPAGGGEEGGVQTANHDVDDGAAVAAGAGPGDDKAESEVPGLSSPAAAVVPKDGKRGHADSSAEAEATREELQQQKQQESLQDEGKEPPAADITPDEPASLEASELSSFLSPRARGEEEAVYWEEAESLSAPVVAEEPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRLVELLGELADGGKVSVHHAVAALDGDGKALARLLDLGVLRLCPQTRSSSVGAGRIDRSTVRAGGTASILSSLSLSLPGSSLDASHSRPGRGSTSADVLAEAGAAFQVGAATPLMAGVFSILKGCQGVEEQAIAGAIHFLSRGGNENAAXXXXXXXXXXXXXXXXXXXFEEESEEWQAHREASMAMLVHRAMTSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSRRSSTSAYRTRRLQTALAAVGCMTTWMEI 838
BLAST of mRNA_A-nodosum_M_contig101.24.1 vs. uniprot
Match: A0A6H5JKL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL7_9PHAE) HSP 1 Score: 233 bits (593), Expect = 3.010e-58 Identity = 209/570 (36.67%), Postives = 255/570 (44.74%), Query Frame = 2
Query: 197 EDVPAAVEAVLRWCWTITGGRRLAHVVMTAPQSMVMDGSLVLVKTFLNDGRPSPGMIRVVGLDAPDVKVTERRFRTRLDRSTKPADDGADVDADAEEEGTKDGGLERAMALCMELVHGEGCGVAEEANVVLRRAVSVDEGKNGKYKGNQTSSRLAVALNGALEGIALEAWRRAAAAVSXXXXXXXTDSMKMKLTMASXXXXXXXXXXXXXXXXXXXLHAMESSPATGDLPYRRASSQE--------WAHS-------------------GVQ----------------------------------------------VDDYDRLEAT---------ESLTRVEHEHEEAYXXXXXXXXXXQ-RYGVRGNGAPGVVFG--AEGVHCAGSVSDVSSVEAAMA-------------------ATPLGRLVKLMGELAGGEKVTVGRAVSVLNGDGKALGRLLDLGVLRLSPQTISGAMSAVRAD----------------------------------DARSSDVLPEADEAFQVGAATPVMAGVFAILQGCSGLEEQAIARAMRVL-RGGN 1489
EDVPAAVEAVLRWCWTITGGRRLAHVV+ APQS+ +DGSLV VK FLNDGR +PGM+RV+ L+APD V ERRFR+R + + G G ++G ERA+ LCMELVH EGC VAEEAN +L R D+ + +++RLA L +LEG ALEAWRR AAV + + +M + TG Y + ++QE W + GVQ D +EAT ESL R E A G G V+ AE + + SS +A ATP+GRLV+L+GELA G KV+V AV+ L+GDGKAL RLLDLGVLRL PQT S ++ A R D + S DVL EA AFQVGAATP+MAGVF+IL+GC G EEQAIA A+ L RGGN
Sbjct: 178 EDVPAAVEAVLRWCWTITGGRRLAHVVLIAPQSLAVDGSLVRVKGFLNDGRLAPGMMRVIALNAPDSSVIERRFRSRFVVAPQQRSQGG---------GGEEG--ERAVTLCMELVHREGCAVAEEANEILTRTDFSDDSPS-----KLSAARLA--LEESLEGFALEAWRRVGAAVESTAAIAPRGFAGAAAVVGTPGAVSSAALASNQRAPVPP--SMSTGGRTG-ATYAKRNTQEGRAESGATWTRTSPGSGSEGDGDPAGGGEEGGVQSANHGFDDGAAVAAGAGPGDDKAESEVPGLSSPAAAVGPNDGKSGHADSSVEVEATPQELQQKQQESLQREGKEPPAADDTADEPAILEATELSPSSGGGEGTVYSEKAESLSAPVVAEESSSSYSAXXXXXXXXXXXXXXXXNPGDPATPVGRLVELLGELADGGKVSVHHAVAALDGDGKALARLLDLGVLRLCPQTRSSSVGAGRIDRSTVRAGGTSSILSSLALSLPVSSLDASHSHPRTGSTSPDVLAEAGAAFQVGAATPLMAGVFSILKGCQGAEEQAIACAIHFLSRGGN 726
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 4458 |
| Hectar predicted targeting category | other localisation |
| Exons | 10 |
| Cds size | 2478 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866368.5560558-UTR-A-nodosum_M_contig101:391661..391786 | 1680866368.5560558-UTR-A-nodosum_M_contig101:391661..391786 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig101 391662..391786 + |
| 1680866368.5658982-UTR-A-nodosum_M_contig101:392757..392826 | 1680866368.5658982-UTR-A-nodosum_M_contig101:392757..392826 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig101 392758..392826 + |
| 1680866368.5739923-UTR-A-nodosum_M_contig101:394456..394536 | 1680866368.5739923-UTR-A-nodosum_M_contig101:394456..394536 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig101 394457..394536 + |
| 1680866368.581972-UTR-A-nodosum_M_contig101:395229..395232 | 1680866368.581972-UTR-A-nodosum_M_contig101:395229..395232 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig101 395230..395232 + |
| 1680866368.6640067-UTR-A-nodosum_M_contig101:402770..404473 | 1680866368.6640067-UTR-A-nodosum_M_contig101:402770..404473 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig101 402771..404473 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866368.5970845-CDS-A-nodosum_M_contig101:395232..395315 | 1680866368.5970845-CDS-A-nodosum_M_contig101:395232..395315 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig101 395233..395315 + |
| 1680866368.6052477-CDS-A-nodosum_M_contig101:396002..396233 | 1680866368.6052477-CDS-A-nodosum_M_contig101:396002..396233 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig101 396003..396233 + |
| 1680866368.6132588-CDS-A-nodosum_M_contig101:396682..397352 | 1680866368.6132588-CDS-A-nodosum_M_contig101:396682..397352 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig101 396683..397352 + |
| 1680866368.6221764-CDS-A-nodosum_M_contig101:397633..397750 | 1680866368.6221764-CDS-A-nodosum_M_contig101:397633..397750 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig101 397634..397750 + |
| 1680866368.635035-CDS-A-nodosum_M_contig101:399549..399816 | 1680866368.635035-CDS-A-nodosum_M_contig101:399549..399816 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig101 399550..399816 + |
| 1680866368.644836-CDS-A-nodosum_M_contig101:401167..401230 | 1680866368.644836-CDS-A-nodosum_M_contig101:401167..401230 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig101 401168..401230 + |
| 1680866368.654574-CDS-A-nodosum_M_contig101:401723..402770 | 1680866368.654574-CDS-A-nodosum_M_contig101:401723..402770 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig101 401724..402770 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig101.24.1 >prot_A-nodosum_M_contig101.24.1 ID=prot_A-nodosum_M_contig101.24.1|Name=mRNA_A-nodosum_M_contig101.24.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=826bp
MTAPQSMVMDGSLVLVKTFLNDGRPSPGMIRVVGLDAPDVKVTERRFRTR
LDRSTKPADDGADVDADAEEEGTKDGGLERAMALCMELVHGEGCGVAEEA
NVVLRRAVSVDEGKNGKYKGNQTSSRLAVALNGALEGIALEAWRRAAAAV
SAAAAASSTDSMKMKLTMASKMASAMPLEEAMGLEEDVGLHAMESSPATG
DLPYRRASSQEWAHSGVQVDDYDRLEATESLTRVEHEHEEAYQQQRQQQQ
RRQRYGVRGNGAPGVVFGAEGVHCAGSVSDVSSVEAAMAATPLGRLVKLM
GELAGGEKVTVGRAVSVLNGDGKALGRLLDLGVLRLSPQTISGAMSAVRA
DDARSSDVLPEADEAFQVGAATPVMAGVFAILQGCSGLEEQAIARAMRVL
RGGNPDGHATELADHEEWQAYREAAMAGLVRKAMLGYGGAVGPADTAATS
ASRRLQVAMAAVGCMVTRREIEAAIQKEHFDATQGGLVPGLLKQHHRRFH
PAAPDGQEFASPSWSSSLPSSPSSIPNEATGKTSDGHESADASASSQPHA
AGRASEESEEPREDAQDEGAPQDEISKAADSAESEGAVGVDSTDGGELKG
GAEANTLAEDGRGVIASSADAAAADFGTGPRHEATAPATGDHVSRPARGE
DVGLAAPGDEADGALARDGDGVESEAATNRVHVPAEGATAVEDDVPSTTL
SSTTQQRESTKSPSSDESLSAGEAPGNSPINSVTVANKAQNERDCASSQP
DDRVDQDQAGVSSSGVDPTMSGGDAVHRDGEGVGRDDHDNQGPQDADPVP
KTSSERSFWNWITRSRPSNGKDGQS* back to topmRNA from alignment at A-nodosum_M_contig101:391662..404473+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig101.24.1 ID=mRNA_A-nodosum_M_contig101.24.1|Name=mRNA_A-nodosum_M_contig101.24.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=12812bp|location=Sequence derived from alignment at A-nodosum_M_contig101:391662..404473+ (Ascophyllum nodosum dioecious)
CGGACCGGCAGCGGAGGCAGTGGAAGAGGGGTGCGGGTGTGGCGAGGGAG
AGGGAGGGAGAGCTGTCGGATATCGGTGCGATTCTCGATACGGCGACCGC
TGCCCTGGAGGAAATCAGGGATCAGGTACATACAGAAGACGTAAGGAATG
TACCTCGAATTGGAAAACAGAGATAGGTACGTACAGAAAAGACATAGGGA
ATGTACCTCGAATTGGAAATCAGAGATAGGTACGTACAGAAAAGACGTAG
GGAATGTACCTCGAATTGGAAATCAGGGATCACGTACGTACAGAAAAGAC
ATGGGGAATGTACCTCGAATTGGAAATCAGGGATCAGGTACGTACAGAAG
ATATGAGGAAAGTACCTCGAATTGGAAAACGAAGTTCCTGGCCGGTAGTA
ACCGATAACTATAACTATAACTATCGCTAACTATCGCTATAATGGTCATA
GTGTGCATGTAGTAATCGCTTCTTCGCATCCCGTGCGCTTTCCCCCGCAC
AAGATATTTATTAGCGCAGTCCTGTAAACGTGGTCCCTTCTACCCACTTA
GGGAATCGGGGTATTAACAATAGTGCGATCACGCAAGACGCAGCACGTCT
TTGTGCTCTTTGTGCCCGAGTGGCGGCCTCTGTGAGTGTCGAGCTTGCTG
TTGCCTTAATCACACGCCGCAAGAAGAGAGGGTTGGAGTCTAGTCGACCG
TTCATGGAGCCTCCTTCGCGAAGCGCTCCTGCCTTGGCACACTTGAGCTA
CAGTACTGTACACTCCGCTACAGAGGAGTTGTATCGCGATCGTCTTGTTA
CGCCCGTGCATTTTTTTTGTGTTTTTTCACCAAAAAAATAGCAAAAAACG
TTGTCGGAAAACGAAAGTTGGAAAATGGAAAACGAAAAACGATGGTAACC
CCCCTCCACCCCGCTTGTAAAACGCACTCTCAACGCTAACTTTCGTACTG
CATTATACAGACGACGCTCGCAAGGTTTCAACCTTGCTATCGCCCGTACC
GATGGATGTCGCTCGTCCGCTCATTGCTCGTCGAATGTAAAGAACAATGT
CCAAAAACAATGTCGAATATCGCTTGTCGATCGTCGCTTGTCGCAGGCCT
ACGACCCTCGAGACCACCTTCCACCCGTCATCGTGATCGACGGTTTGCTG
GAGCGCGTCAGGCGCGTCAGGCCCGGTCATGGTGGTTCTGGAGTTGCGCA
CCCTATAATTTCGCGTCTTTCTTTCGTGTCAGATTCATGCATCCAATCAG
TCGGCTACTATTTAATTAATAGTCCTGACGTTACTCTCCGTACATTTTCC
CGGCCTGGATGCGACAAAGCCAGTCTGTCTACCTTGGTTATTTGTAATTT
AACCCAAAGTACGCCGGTACTTTCAATATGCCCACTTCATACCAATAGTG
GGTGTGGGAAAGAGAGGCGAATATTAATTGGTCCACATCATGGTGACCTG
CCAAGGCAACACTCCCTCGGAACTACCTTGAGGTTTACTGGCCCCGTGCC
GGCGGAATCTCGGCAGTGAACGCCATCGGTACGCAATTGCGTGACCCAAT
AAACTCGGGACTGACCCGATGACGTATGGCGGTCATAAATGAATAAATGG
ACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACCAGATTCAG
CCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGGGACTGCCGAACCCG
TCTCGCGAGACCAAATTCTCAGGCGCGAACGCGGACAGGGGAATATTAAT
TTCCCTGTTCAGCCGACCACGAGCAGGATTGACAACCTTACCCGGTTGAT
TCATGCTCTTGCTATATGTGTGACCATATATACATATATATATAGTATAT
AGTATATAGAGGAGAGCTGTTAATAATGTTGTCGAGCGGCGTATGCTTCT
CTTTGCCGTTCCCGTATTTGGGTGCTTATATATTGCAGTACTCTATAGTG
GACGGCCAACTCGAAGGCGTCGTATTGATGAGAAGCGACGATCTCCATCG
TGAGGGTACCGTACGTAGTGGCGTATGGTGGTGGGCGTATTAAAGACCCG
GGGATAAGCCTTCCGCCGTCCCCGCCCCCTCTGTTAGACACGTGTCAAAA
CATCTCACCGAGACCCTTCCAAGAATCGGCAGTGTTTCGCTCTTATATTT
TGTCTGCCCAATGGTGGATGAAAAATATGTCGAGCGATAGGGGATACAGG
GGACAGGGGACTCTATCATACTGCTGATGTACATAATTGCACGCCTACGA
TAGTCTACAAGGCAGGCAAGCGAGCGAGCGTTTTCTGCACACGGTCCCAC
CGAAAAAAGCGCACCAAGACTGTGTGCAGGTAGTACAGTACAGGTAGTAC
ATACATGACGTCCATACATGACGTCCTCAGACCTGTACTACCTGTCCTGT
ACTGTACACTATTATAGCGGTCATACATGACGTCCATACATGATCAGTCC
TCAGACTAGAGACTGGCTCTACTCGTGTTTATAGTAATAGTAATAGTAAT
ATAGACTACTATTTAATATATATAGCCTATATATTGAAGTTCTCTTTACA
ATATTTGAAAGAAAAAATTATAGGTCTTTTAATATCTATAAAAAATGTTA
ATATATTGTTTCTTGGGGTTTACCAATACAGTAATAAGCTTTGCTGTTGG
TGAAAAGTTCGGTTTAAAATGTATAATTTATGTAAATAGAACATACATTT
TTTTCTTGTTTTTTTAAATGTTTTTTCGCGGTCTGTCGTCGGCGTCCGTT
CGGCGTCTGTCCGTCGTCTGTTCGGTGTTGGATGCTCGACTCCAGGAGAA
GACGTACCCGCCGCTGTTGAAGCCGTGCTTCGGTGGTGCTGGACGATCAC
CGGCGGACGCCGACTAGCCCACGTGGTACGACACTATCCGCGGTGTAAGA
TTCTTCTACTAATACTATATAATACGATATAATACCATACTTTTTTCTTT
TTTTTTCTTTCATCTCACTTATAGCCGGTGGACCTCATCATTACCATCCT
GCCTGTGGTCACAAAGGATCTTCCCATCTCTCCCCGGTTCACGCCTTACA
ATTTTTTATCGCGATGCAAGTTCAGCACTCTTACAACTCGTCAACCAATG
GTTGAATTTTACTTACTCACGCTCCCACGCTTTCCGTTACGAAAGAAAAA
ACACAAATCCTACTTTGGTAAGAATCGAACTCACGACTTCCGTACTAGCA
GATGTGCAGCTTACTTACTAGACCACTCGGGCGACGAGCTACCAGGTACG
TATTACTATTACTAATAAACTACAGCGGTAGGATGGTATCCTCCTCCCTC
CACGTGTGGTAGGGATGCATCGGAGCATGGTGTCGCTTACTGCACCGACA
CTTTTATACTCATTTCGAAAGCTGTGCTTTTGTTATATTTGCAACTACAT
TGTACAAAGTACTTGGTCAGTTTGACCTTCTACTTGCTCTTATTGTTTAC
TTTTTGTTGTAAAAGTCTAATGCTGGAGGAGGATATTATTATCGTAGAAG
AGGTTTTCCACTTGGAGATAACGCAAGTTGTTGTAGTCGTTTTTTAATCG
TAACTTACTGTGACTCAGGTGATGACCGCACCGCAGTCCATGGTGATGGA
TGGTTCTCTCGTACTGGTCAAGACCTTTCTCAACGATGGCCGTCCGTCTC
CTGGGTGAGCCTACTGACTTCACCGATCTGACTTACCTTACGGCCCTCAC
TGCCCTGACTGCAGTGTATATAGTGTAAAGTGTCAAGTGTATATAGTGTA
TATAGTGTGTAGTATATAGTGTCAAATGTATATAGTGTATATAGTTTATA
GTATATAGTGTAAAGTGTCAAGTGTATATAGTGTAAAGTGTCAAGTGTAT
ATAGTGTAAAGTGTCTAGTGTATATAGTGTAAAGTGTAAAGTGTATATTG
TACAACATATAGTGTTCGGGGCTTTCGCTCAAAATCTCCGCCGGCCACCA
TGGTAGGTCGGGTACAACAGTTCAGTAGTTCAAGCATTCGATCGCTTCCC
TACCAAAGAGGGCATGTGTTCCGTGTGTGCGATGTCACCACTATGTATTC
ATAGGCCAAGTGTACTTAAATTGTGAGGCGAAGTGTGCGAAACTTAAGCA
TACTCTAGACACACGCACCCGAAAAAAACAGCGCCCTTTTTACGCCCGCC
TGCAAGCACCGGTGTCTAAATGTATCTACATGCGGTATACAAGTATAACA
GAGGTCCTCCCATCGTTATCAGTTGGACTCCTTCGCCCGCGGTGTCCCAC
GAGGGTTATTTCCTCAACTGTTCTTTCCGAACTGTGTCGCTTGTCTTTTC
TCGAATGTCGAACGTTACTGCATCTAATGGTGTATAATCAGGATGATTCG
AGTCGTCGGTCTCGATGCTCCAGACGTCAAAGTTACGGAAAGGCGATTCC
GAACACGCCTCGACCGCTCTACGAAACCTGCGGACGACGGAGCCGATGTA
GATGCCGATGCTGAGGAGGAGGGCACGAAGGATGGGGGCCTCGAGCGCGC
CATGGCCCTGTGCATGGAGCTGGTTCACGGCGAAGGTTGCGGCGTTGCCG
AGGAAGCCAACGTGGTTCTCAGGTGAAAGCGTGCGCTGGCTGTGGGGTCA
GCGCCGAGAGACCAAACGGAGACAGAAATGCATGACAGGCCGTCACGCCT
CACGAATGGTGTTGATGGCACCGTAATGGTGTTGATTCCCGCCGCGACAT
GGTGGCAGGGACGTGGTAGTTCTAGACCCCAGTGATCGGCGGACCTGACG
ACGTGTTGCCGAGTTCCATGGGCCGCGACCAAACGAAAAGTAAACGGGCG
GGATTTCCTTGTCCAAACGGCGTTGATCGGCGCGCTTGTAGTATACGGTG
GCTCTTTTTTTGCCCTTTATTGGTTTGAAGTACTTACAGCCGTTGGTAAG
ATTCACTATTTAGTAAGCATGAACGTTGTATCGGGTCTACGGAGATCTCT
ACTACCAAAAGTGCATATTTTGGACAGGGTTGGTAAAAGCCGCCTCCCGA
ACGTCTGTGGGTGCCTTACAGACGAGCAGTGTCCGTGGATGAAGGCAAGA
ATGGCAAGTACAAGGGCAACCAGACATCTTCTCGACTGGCGGTGGCGCTA
AACGGAGCCCTCGAGGGCATCGCGCTGGAGGCTTGGCGACGCGCAGCCGC
CGCGGTATCTGCGGCGGCGGCGGCCTCCTCCACCGATAGCATGAAGATGA
AGTTAACGATGGCATCGAAGATGGCGTCAGCGATGCCTCTGGAGGAAGCG
ATGGGGTTGGAAGAGGACGTCGGCCTTCATGCCATGGAATCCTCTCCCGC
CACGGGCGACCTTCCGTACCGAAGAGCGTCGTCGCAAGAGTGGGCTCACT
CCGGAGTCCAGGTCGATGATTACGACCGCTTGGAAGCGACGGAGAGCCTA
ACTCGGGTGGAACACGAACACGAGGAGGCATATCAGCAGCAGCGGCAGCA
GCAGCAGCGGCGGCAGCGGTACGGCGTTCGAGGAAATGGTGCACCTGGGG
TGGTCTTTGGTGCTGAAGGCGTACATTGCGCGGGTAGTGTCTCCGATGTC
TCGAGCGTGGAGGCCGCCATGGCAGCGACACCGTTGGGACGCCTGGTCAA
GCTCATGGGAGAGCTCGCCGGTGGCGAGAAAGTGACCGTGGGTCGCGCAG
TGTCGGTCTTGAACGGAGATGGAAAGGCGCTGGGCAGGCTGGTGAGATTT
GGTGTTCGAGTGGTATTTACGATCACTTTGTCTTCATTAAGGGTCGTTGA
CTTAATTGGCGTTTGGTGAGGTATAAATAGGGCTGTTGCCATCGACGGTT
GTGCTGCCCCTCTACCGGTAGTCTACACGGACAAATATTTAGGGCTGATG
TCGTGTCACCGAAATGAGCCTGGAGTCCACGGGGGGGAATAACCTCTTGC
TAACCCCAATAAACTCTCTCAACCCTCGCTTCGTTCCCACCTATCGCGTG
TCTGATTGCGATTGCCTCCTAGCTCGACCTTGGAGTGCTTCGCCTATCCC
CGCAAACGATCTCGGGCGCGATGAGCGCTGTGCGTGCTGATGACGCGCGC
TCTTCTGATGTTCTGCCAGAGGCTGACGAAGCGTTCCAGGTGAGCACGGC
ATCGGTTCTGCACCTTTCGATTTTCTTGCGGCTTTCTTGTTTATTTTTGT
TATGTACGAGTTCGTGGTGCGTAGTTTTTTTGTTTTTTCTTGGTTGCGTG
CTCGTTATGTATAGTGCGTATGTCAAGCAGGCGAAGCGATCGTGGTACTT
ACGACTTTATAGTGTTAACTAATCACTACAGTGTGTTTTTTCTATCATTG
ATGGTGTAAGTGTATGGTGTACAGTATCCAAGGATACAAAAGACAAGGTA
ACTGTGGCCGCAGAGCTACGTGTATAATGTATCCGAATCCCTTTGAAGAT
ACGTTTTACGAGAGTGTAATGAAGTTTATTTAGTTGTTGTGGTTGATCCA
CACATTCAGCGCATTACTCTTGAGCTGAAGAACTATGATACGGTGACACA
ACAAGTCAGCCATAGACCAATCGAATGCCAGTCCCGCTCGTGGTCACAAA
GAGGTACGAAGGTTAACGGGTCACGTCATGGCGACAACCCGCTACTAAAA
CCAACAGGGATCCAAATCGCGACAAAATCCTTGCCAGGTTTTACCACCTT
AAAGAAAACGTATCGGCGTCAAGAATATGTCTTTGGGTACGAGCTACAGC
TTCTACTGTCTGGAGTTCTGCCGATTCTTCAAAAGCTGAATTACAAGCTA
CAGAGAACACTGTCTGAACGTGATGCCCATCTACCAAAGTACCAAACTCA
TCAAAAGGGGCTCAAAATGTTTTCTAGCTATCGGAGGGTTACACGAAGAC
AATTTATGCGGGACTTTACAAGGGATGGCACCGACCAATGTCAAAACGGT
TCATCAAACCTCCTTACTCGATTTCGAGAACAACCCCGAATGAACACTTC
GGATTGTTGTCGCCTACCAACGGCCAGCGTTTTCAGCAACAAAGCGGACA
AATCACGCTCCAATCATTTTTGATGAAGAAACCCAAGTTTCTCAAGGCCA
CACGTCACCCTGAAAAAAAAGGAAAATCGTAGTACCAACGTTAATAGTGG
TGGAGCCCTTAAGCTGGTGAAGACCGCGCGCTTGCCATCATCCAGCCGTC
CGAAGCCCTGTGCATCCCTTGAGAACGCCCCAGAAATCTTGTCCATTCGT
CGTTCCTTGTTTTCCTTGGTGAGAAGAAAACAGACCATGGTCAGATCAGC
TTTTCCCTCGGAAACTTCCTGATTCTCGCCTTCGGTTCTCGCGCACATGG
GTTGAGCACTCCCCTGGCTCGTCGAATATGGAGTTACCCTCCGCCCTCGC
CGAATCTGGTGCTTTCTCAGCCGATAAAGCGTGCCACGATACGCTTGCGG
CGTGCTGCGGTGCCCTAAAAGACTTTCCGCATAATTTTCCCTACCTCTCG
CGGGCCAACATTAATACATTAATACAATACCTCCCGAAGGGCACCAAGTT
GGAGCTCGCAAGAGGTACACCTGGTGAACACCATCCTTGGCCATTCAAAC
CGCCGCCGCGTCTCAGCCGACCGGCTGAATCGCGTAGACAGCCAGTTGGT
TGCATCTCTTGAGAGTGAGTCCAGCCCTATACCCGCCGGAAAGACCCTCC
CACGATCATACCCCAAATCGGAGGGAGAGGGCACGAGATGATATGATTTC
TACCTAGCACACCGAATACTGTACTGTACGTGAATCATACACAAAGCAGA
AGGTGACAAGTTTCAGAAATCAAGACGATCGGGTGCAGTTCTAGGAACGA
TTGCATCTCCGCGGTCGTTCTTGTTTCTCTATGTACGTTAAAGCGATGTA
TCAATGCGGAAGCACCTGATGACTTATTTGTGTTGCAGGTCGGAGCTGCG
ACCCCCGTCATGGCCGGTGTCTTCGCCATCCTGCAAGGTTGCAGCGGGCT
CGAAGAGCAAGCTATCGCGAGGGCAATGCGCGTCTTGCGGGGTGGGAACC
CCGACGGTCACGCGACGGAGCTGGCCGATCACGAAGAATGGCAGGCGTAT
CGAGAGGCCGCCATGGCAGGCCTCGTGCGAAAAGCTATGTTGGGCTACGG
AGGAGCTGTAGGGCCCGCGGATACCGCTGCGACCTCTGCTTCACGCCGCT
TACAGGTGCTGCACCTTTCACCTCTTTCTATTAATAGAGCTTTGACACCA
CTGCCGACACTATGTCCTTTATTAACAATACGAGTGCAAAGAGTTAGATA
CGTTGACTCGTCGCCCGAGTGGTCTAGTAGGTAATCTGCACACCTGCTAG
TGCGAAAGTCGTGAGTTCGATTCTTACCAAAGTAAGATCTGTGTTCTTTC
TTTCGTAACGGAAGCGTGGGAACGTGAGTAAGTAAAATTCAACTAGTCTA
GTGGTTGACGAGTTGTAAGATTGCTGAAGTTGCATCGCGATAAACAATTG
TAAGGCGTGCACCGGGGAGAGATGGGAAGATCATCAAGTGACCATAGGCA
GGATGGTAATGTGAGGTTCATCGGCTATAAATGAGATTAAAGAAGAAGAA
AAAAAAGTGCGGTGCTACTCTCGTGCCGCTGCTGCTGCGGACGTACTATT
AATAATCACGGCGGACGCACTAAGTACTACCTGGTAGTACTTGTCAATTG
TTGACCTCATGGTACGTGCCTGTTTGCTTTTCCTGGAGCGTGGTATTAAC
TTGTAGAAGACGAGGGGACCCTGTTGGCAGTCAAGTATCTCAAGATCATC
TCATCCACTCAACAAATCAAGAGATCAATGTATCAATCGAATCGCTGGTG
ATGGGATCAGGAAACCATGCGCGTGGAATTGTCAAACGGTCCACTCTATG
GTCTTTTCGTTTCCCCGTCCCCGAGTAACATGGTTGATACGACAGAAATA
TGGCTCCTTTTTTTTTTCTTTTTTTTTCTTCTTTTCTTTCATCTCACTTA
TAGCCGATGGACCTCATCATTACCATCCTGCCTGTGATCACAAAGGATCT
TCCCATCTCTCCCCGGTTCACGCCTTACAATTTTTTATCGCGATGCAAGT
TCAGCACTCTTACAACTCGTCAACCAATGGTTGAATTTTACTTACTCACG
TTCCCACGCTTTCCGTTACGAAAGAAAGAACACAAATCCTACTTTGGTAA
GAATCGAACTCACGACTTCCGTACTATTAATAGCATATGTGCAGCTTACC
TACTAGACCACTCGGGCGACGAGCGGCAAACCACAATAATACCACAATAA
CATGGTTGACACGGAAACAACGTCATCGATTATTGAGATTGATGGTGACA
TGTTTAAGATTCTATTTTGAGCCCATTGTCGATTATCAGAAGGCTGTAAT
AATAATTGATAGTAACATGGTTGATACTGGCTATGTATTCGAAAGTTACG
GTACTACTGTAGAGTAGTAATCTTAGCGAGAAATCATTTTTAGTTGTCCC
ATGTTTTCCCATGTTGTCCCATGAAATTTGCGTGCGAAATGAATCAAACG
AAACAGGTGGCCATGGCAGCCGTGGGGTGCATGGTGACAAGACGCGAGAT
CGAAGCTGCAATCCAAAAGGTATTAGCTACAGTTACAGCTACAGTGTTTT
TTCCCTGATTGCTTTTGCTTCTCTTAGCCGTTGTGTCTCTGACCGAGCCT
TATGCTTTACATAAATGGTCTAAACAGCAATATCAATACGATCGATAGTC
GAAATAGATTTACCTTTTATGACCGCTCGTGTGGTCAATGTCTGAGAGAT
ATTGAAGGATACAAAATATCTTGTCTTCGGGTATATCACCTATATCCACT
TCCCTACCAGGTATATTTTACGCATCGAAATCCCTCTGCCCCCTTGTCGG
GCTATCTCCATTTCAATGTTTCAAGCGAGATATCCCGAGGTACTGCATAC
GTATACCGGTATAGCGTAAGTGGTAAATCTAAAGTTGCATGTTCCAAATG
AAATGTCTCCCGAGGTCCTTGCTGCCGCTCAGTGGATGTATGTACGTGGT
AACTGTTACGTGACTCATTGTCAGTATTTACAGACGTGATACAATCGCTG
CACGTCGGACAGGAACATTTTGATGCAACGCAAGGAGGCCTTGTGCCAGG
ACTGCTTAAACAGCACCATCGCAGATTTCACCCAGCAGCCCCGGACGGTC
AAGAGTTCGCGTCACCGTCATGGTCATCTTCGTTGCCATCCTCACCGTCA
TCGATTCCGAACGAGGCGACAGGCAAGACCTCCGATGGCCACGAGAGTGC
TGACGCTAGCGCCAGCTCTCAACCCCATGCTGCGGGTCGGGCCTCTGAGG
AAAGCGAAGAGCCTCGAGAGGACGCTCAAGATGAAGGTGCACCGCAGGAT
GAAATTTCAAAGGCGGCAGACTCCGCAGAATCTGAGGGTGCGGTAGGTGT
CGATAGTACCGATGGGGGTGAGTTGAAGGGTGGCGCAGAGGCAAACACGC
TTGCGGAAGACGGCAGAGGTGTCATAGCGTCTTCTGCTGATGCTGCTGCT
GCTGATTTCGGCACAGGACCAAGGCACGAGGCCACGGCTCCGGCCACCGG
CGATCACGTGAGCAGACCCGCGAGAGGTGAAGACGTTGGCCTTGCTGCTC
CAGGAGACGAGGCGGACGGTGCCCTTGCAAGAGATGGCGATGGAGTCGAA
TCAGAGGCTGCCACCAATAGGGTGCATGTTCCAGCTGAAGGAGCAACTGC
AGTAGAAGATGACGTGCCAAGCACGACTTTGAGCTCGACAACCCAGCAGA
GGGAATCCACGAAATCGCCGTCGAGTGATGAAAGTTTATCAGCTGGCGAA
GCTCCCGGTAATAGTCCTATCAATAGTGTAACGGTTGCCAACAAGGCACA
AAACGAACGTGATTGTGCTTCCTCTCAACCGGATGATCGAGTCGATCAAG
ACCAAGCCGGCGTCTCCAGCAGTGGTGTAGATCCGACCATGTCCGGAGGG
GATGCAGTACATCGAGATGGAGAAGGAGTTGGACGCGATGATCATGACAA
CCAGGGACCCCAAGACGCGGACCCCGTTCCCAAGACGTCATCAGAAAGAT
CGTTTTGGAATTGGATTACTCGCTCCCGGCCAAGCAACGGAAAGGATGGT
CAGTCGTGATGCGCTACGGAAATATTTTGGTCGTTAAGCTTGGCGTGCTT
GGCGGGCGTTGCCGGTTGGTGTTAGGTCCCGCTCGAGGTGGTCGCATCAA
GGCTGGTCCTCTGTCGCTATAATAATATGCCTATTATTTGGCACTCCCAT
AAGTAAGTGGTGTTCGATGCTTGGTTGTTTGGCGGTTGGAGGGCTTGTTG
GTTGTCCGGACGGCGTCGGAAGCGTGTACTCACTTGGTCAAAATTTTGTC
CGAAGGTGGGCTTGCTCATCGCGATTTATATTATGAGCCGATCCTCGAGT
TCAGAGCTACAGGACCTGAGAAACGCACCTAAACGCAATCATGACACCTG
CTGCAGTCAGGAAGTGGCTGTAGGACCTTCAGCACTCAAAATCATTATCC
ATACGAGGTAAACAAGCTGCCAGACTCGACAGGGTCTGCTTTGCTAAGAT
TAACCTCGCCTGTCCATCAATTCCAGGCTAGCGCTGAACCGGACCCACCA
ATCGATGGTACAAACCGACGTGATGCGCCATGGGTGAACGTGGTTGTGTT
TTGTGGTAGACCTTGTGCGATATGCTCCTGACAACGAGAGCTTGTCTGTT
GCTTGGGGGTGCTACGTAGATGGAACGTCGCGCCCGCTTCCCAATCGGGA
TTTAGAGCTATGTTTATCTCTCTCCTGAGTGTATTGTAGAGGCTAGACGT
CCGTTGCCTTCTTTCTTTATAAGTCTTGTATTGAGAGCTACATTACTACC
GTAGTGCGAATAGTAAGTAGCAGCTAGTTTTTTCCCGGCAAGCCTATCTA
TGGAGAATAGTTGATCGACGCTATAGCAAGAATGAAGGGTACTTGGTCGA
TTTTGACCCGGAAAGAGACGGCTGATGCAAGGCTGCGCCTTTATAAACAA
ATCACACTCGACGGGCGTGACGTAGACGGTTGTATTGAAGCGCTAGGACC
TCAAAGAGTTATCTACGCGTGTATGTTGATTCAAGTCGTGGATATTTTCT
TCCTCGGCGATGTTTGAAGAAGTCCGACAGAACTCCGACGAGCTGGGTGG
AGGAGGTTTATACTCACTCGTACCTGTATATGCTCCGAAGCACAGTGCTT
CGTACTTCAAGTACGAAGTTCGTCGTCGTAGCAGGCACTGTATTTCGAAT
ATACTAAGGCACTACAGTGTGGTAGGTGTATGTTTGGTTGGTCAAATAAA
CTTCAGTTGGTGCGTACTATAATAAACCTATTATGTGTATCACTCACGTC
TCAGTTTTGCTCTCGGAGGTCGATCTAAAGTCCGTTGTATTGATGCTTCA
TCGCAGCTATTGATAGTCTCTTTGTTGTCATCTGCCTTACGTTTGACTTA
AGTACTGTATGGACTCTGATTTCGATACATAAAAAAGTTGGAGCGCCCAA
GTGTATAGAGCTATTTATAACGACTAGCTCGAAGACGTTTGGCAGCTTAT
AAGTGCATTGACAAGTGGATGTTTTATGGCCGAGGGGGAATTTTGATCGT
CTCTCCCAGAGCTAATTGATGCACGAGTAGCTCGACATGATGCGAAGTTA
GGGGGACCATTTGGGAAAGGGCACACGCACACACGTGCGTTGAAGGTCAA
GTACATGCTCTGCTGTACGTTCGTGTATTCTGTTGTGCCAACCATCCATG
GACCAGATAAGACATCGACATAATCTCCGCTCGCTTTTCGCTATGAGTAC
CATATACAGACG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig101:391662..404473+ >mRNA_A-nodosum_M_contig101.24.1 ID=mRNA_A-nodosum_M_contig101.24.1|Name=mRNA_A-nodosum_M_contig101.24.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2478bp|location=Sequence derived from alignment at A-nodosum_M_contig101:391662..404473+ (Ascophyllum nodosum dioecious)
ATGACCGCACCGCAGTCCATGGTGATGGATGGTTCTCTCGTACTGGTCAA
GACCTTTCTCAACGATGGCCGTCCGTCTCCTGGGATGATTCGAGTCGTCG
GTCTCGATGCTCCAGACGTCAAAGTTACGGAAAGGCGATTCCGAACACGC
CTCGACCGCTCTACGAAACCTGCGGACGACGGAGCCGATGTAGATGCCGA
TGCTGAGGAGGAGGGCACGAAGGATGGGGGCCTCGAGCGCGCCATGGCCC
TGTGCATGGAGCTGGTTCACGGCGAAGGTTGCGGCGTTGCCGAGGAAGCC
AACGTGGTTCTCAGACGAGCAGTGTCCGTGGATGAAGGCAAGAATGGCAA
GTACAAGGGCAACCAGACATCTTCTCGACTGGCGGTGGCGCTAAACGGAG
CCCTCGAGGGCATCGCGCTGGAGGCTTGGCGACGCGCAGCCGCCGCGGTA
TCTGCGGCGGCGGCGGCCTCCTCCACCGATAGCATGAAGATGAAGTTAAC
GATGGCATCGAAGATGGCGTCAGCGATGCCTCTGGAGGAAGCGATGGGGT
TGGAAGAGGACGTCGGCCTTCATGCCATGGAATCCTCTCCCGCCACGGGC
GACCTTCCGTACCGAAGAGCGTCGTCGCAAGAGTGGGCTCACTCCGGAGT
CCAGGTCGATGATTACGACCGCTTGGAAGCGACGGAGAGCCTAACTCGGG
TGGAACACGAACACGAGGAGGCATATCAGCAGCAGCGGCAGCAGCAGCAG
CGGCGGCAGCGGTACGGCGTTCGAGGAAATGGTGCACCTGGGGTGGTCTT
TGGTGCTGAAGGCGTACATTGCGCGGGTAGTGTCTCCGATGTCTCGAGCG
TGGAGGCCGCCATGGCAGCGACACCGTTGGGACGCCTGGTCAAGCTCATG
GGAGAGCTCGCCGGTGGCGAGAAAGTGACCGTGGGTCGCGCAGTGTCGGT
CTTGAACGGAGATGGAAAGGCGCTGGGCAGGCTGCTCGACCTTGGAGTGC
TTCGCCTATCCCCGCAAACGATCTCGGGCGCGATGAGCGCTGTGCGTGCT
GATGACGCGCGCTCTTCTGATGTTCTGCCAGAGGCTGACGAAGCGTTCCA
GGTCGGAGCTGCGACCCCCGTCATGGCCGGTGTCTTCGCCATCCTGCAAG
GTTGCAGCGGGCTCGAAGAGCAAGCTATCGCGAGGGCAATGCGCGTCTTG
CGGGGTGGGAACCCCGACGGTCACGCGACGGAGCTGGCCGATCACGAAGA
ATGGCAGGCGTATCGAGAGGCCGCCATGGCAGGCCTCGTGCGAAAAGCTA
TGTTGGGCTACGGAGGAGCTGTAGGGCCCGCGGATACCGCTGCGACCTCT
GCTTCACGCCGCTTACAGGTGGCCATGGCAGCCGTGGGGTGCATGGTGAC
AAGACGCGAGATCGAAGCTGCAATCCAAAAGGAACATTTTGATGCAACGC
AAGGAGGCCTTGTGCCAGGACTGCTTAAACAGCACCATCGCAGATTTCAC
CCAGCAGCCCCGGACGGTCAAGAGTTCGCGTCACCGTCATGGTCATCTTC
GTTGCCATCCTCACCGTCATCGATTCCGAACGAGGCGACAGGCAAGACCT
CCGATGGCCACGAGAGTGCTGACGCTAGCGCCAGCTCTCAACCCCATGCT
GCGGGTCGGGCCTCTGAGGAAAGCGAAGAGCCTCGAGAGGACGCTCAAGA
TGAAGGTGCACCGCAGGATGAAATTTCAAAGGCGGCAGACTCCGCAGAAT
CTGAGGGTGCGGTAGGTGTCGATAGTACCGATGGGGGTGAGTTGAAGGGT
GGCGCAGAGGCAAACACGCTTGCGGAAGACGGCAGAGGTGTCATAGCGTC
TTCTGCTGATGCTGCTGCTGCTGATTTCGGCACAGGACCAAGGCACGAGG
CCACGGCTCCGGCCACCGGCGATCACGTGAGCAGACCCGCGAGAGGTGAA
GACGTTGGCCTTGCTGCTCCAGGAGACGAGGCGGACGGTGCCCTTGCAAG
AGATGGCGATGGAGTCGAATCAGAGGCTGCCACCAATAGGGTGCATGTTC
CAGCTGAAGGAGCAACTGCAGTAGAAGATGACGTGCCAAGCACGACTTTG
AGCTCGACAACCCAGCAGAGGGAATCCACGAAATCGCCGTCGAGTGATGA
AAGTTTATCAGCTGGCGAAGCTCCCGGTAATAGTCCTATCAATAGTGTAA
CGGTTGCCAACAAGGCACAAAACGAACGTGATTGTGCTTCCTCTCAACCG
GATGATCGAGTCGATCAAGACCAAGCCGGCGTCTCCAGCAGTGGTGTAGA
TCCGACCATGTCCGGAGGGGATGCAGTACATCGAGATGGAGAAGGAGTTG
GACGCGATGATCATGACAACCAGGGACCCCAAGACGCGGACCCCGTTCCC
AAGACGTCATCAGAAAGATCGTTTTGGAATTGGATTACTCGCTCCCGGCC
AAGCAACGGAAAGGATGGTCAGTCGTGA back to top
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