Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 751 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 378 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866365.3962543-CDS-A-nodosum_M_contig1009:239521..239899 | 1680866365.3962543-CDS-A-nodosum_M_contig1009:239521..239899 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1009 239522..239899 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866365.4050486-UTR-A-nodosum_M_contig1009:239899..240271 | 1680866365.4050486-UTR-A-nodosum_M_contig1009:239899..240271 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1009 239900..240271 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1009.31.1 >prot_A-nodosum_M_contig1009.31.1 ID=prot_A-nodosum_M_contig1009.31.1|Name=mRNA_A-nodosum_M_contig1009.31.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=126bp
QNRRSTVKYSEDSLASIRPSPLRCQPPHACAVCQPSPNRFGFGYSPTTTL
QGREGKFACRGTRSTLRCQSSRHSCPLYSDVLDNRHKMQLYINHRRTTQK
VSKISDQRYEDTGTTECILVRHVKQ* back to topmRNA from alignment at A-nodosum_M_contig1009:239522..240271+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1009.31.1 ID=mRNA_A-nodosum_M_contig1009.31.1|Name=mRNA_A-nodosum_M_contig1009.31.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=750bp|location=Sequence derived from alignment at A-nodosum_M_contig1009:239522..240271+ (Ascophyllum nodosum dioecious)
CAGAATCGCCGTAGTACAGTAAAGTACAGTGAGGACAGTCTGGCGTCGAT
TCGTCCGTCGCCCCTTCGCTGCCAGCCACCACACGCATGCGCTGTCTGCC
AACCGTCACCAAACCGGTTCGGTTTTGGTTACAGTCCGACGACGACACTC
CAAGGAAGGGAAGGAAAATTCGCCTGCCGAGGAACACGGTCCACCCTTCG
CTGTCAGTCTTCACGACACTCGTGTCCTCTATACTCAGATGTACTGGACA
ATCGACACAAAATGCAATTGTACATAAATCATCGGCGGACAACCCAAAAA
GTATCGAAGATATCGGACCAAAGATATGAAGATACGGGAACGACGGAGTG
CATCCTGGTGCGTCATGTCAAGCAGTAGTATGAACGTCGTTGTTGCAGCG
GCACCCAGGGAGTCTTCATAAGAAGCTGATGGTTGAAGAAACTATACTGT
CCTGCAGATAGATGCTGCCATTAAGTTTGGTGAGATATCGTAATGTACGG
AAAATTTGTACGGAGTAGGATTTTTACCTTGTTGTACGCTCCGTGTACTC
CCCGGGGTAAAAGTATCTACGCATACATCAGTGCAGGTACTGTACCACAG
TCTGTGTTGCCTGCTACACGCCTGCACGTTCCGAATGCAGCGAGCGCAAG
TAGTATAGTTTACAGGAGTCCTCTGTGATGCAGTGTTTTTTGTGTGGATG
AGTGTGCCCTAATCGACACCATAATGTATCGAAGACGGTAAAAGTTATGC
back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1009:239522..240271+ >mRNA_A-nodosum_M_contig1009.31.1 ID=mRNA_A-nodosum_M_contig1009.31.1|Name=mRNA_A-nodosum_M_contig1009.31.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=378bp|location=Sequence derived from alignment at A-nodosum_M_contig1009:239522..240271+ (Ascophyllum nodosum dioecious)
CAGAATCGCCGTAGTACAGTAAAGTACAGTGAGGACAGTCTGGCGTCGAT
TCGTCCGTCGCCCCTTCGCTGCCAGCCACCACACGCATGCGCTGTCTGCC
AACCGTCACCAAACCGGTTCGGTTTTGGTTACAGTCCGACGACGACACTC
CAAGGAAGGGAAGGAAAATTCGCCTGCCGAGGAACACGGTCCACCCTTCG
CTGTCAGTCTTCACGACACTCGTGTCCTCTATACTCAGATGTACTGGACA
ATCGACACAAAATGCAATTGTACATAAATCATCGGCGGACAACCCAAAAA
GTATCGAAGATATCGGACCAAAGATATGAAGATACGGGAACGACGGAGTG
CATCCTGGTGCGTCATGTCAAGCAGTAG back to top
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