Homology
BLAST of mRNA_A-nodosum_M_contig1009.25.1 vs. uniprot
Match:
A0A835ZAU1_9STRA (Triosephosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAU1_9STRA)
HSP 1 Score: 68.2 bits (165), Expect = 1.880e-8
Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 1
Query: 4 MEGYKIKNAHDA-----TGGMTLKWTQEELPWRVAACGVLHYLRNVMAFHALSAVHPVTYAIGSSMTWVAISTSMAVEFKPAVVPMTTLGSAIVITGTLLYFLAQA 306
+EG KI++A + GG WT ACG+ +YL N +AF AL VHP+T+A+G+++ V I + + F + PM+ GSA+ ++GTLLY LA++
Sbjct: 273 VEGSKIQSAFETGIAGYVGGANKFWTH------FFACGLSYYLYNEVAFLALGQVHPITHAVGNTIKRVVILIASVIAFGTKMRPMSIAGSAMAVSGTLLYSLAKS 372
BLAST of mRNA_A-nodosum_M_contig1009.25.1 vs. uniprot
Match:
B5AJS9_GALSU (Sugar-phosphate:phosphate translocator, DMT family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=B5AJS9_GALSU)
HSP 1 Score: 63.9 bits (154), Expect = 5.000e-7
Identity = 35/92 (38.04%), Postives = 55/92 (59.78%), Query Frame = 1
Query: 37 ATGGMTLKWTQEELPWRVAACGVLHYLRNVMAFHALSAVHPVTYAIGSSMTWVAISTSMAVEFKPAVVPMTTLGSAIVITGTLLYFLAQAFF 312
AT G T T +L + G+ YL N +AF+AL +VHP+T+++G++M V I + + FK + P +GSAI I+G LLY L + ++
Sbjct: 314 ATSGKT---TSMQLITGLLTSGLFFYLYNEVAFYALDSVHPITHSVGNTMKRVVIIITSLLVFKNPITPANAIGSAIAISGVLLYSLTKYYY 402
BLAST of mRNA_A-nodosum_M_contig1009.25.1 vs. uniprot
Match:
A0A7S0BWP6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BWP6_9STRA)
HSP 1 Score: 56.2 bits (134), Expect = 2.100e-5
Identity = 32/81 (39.51%), Postives = 47/81 (58.02%), Query Frame = 1
Query: 70 EELPWRVAACGVLHYLRNVMAFHALSAVHPVTYAIGSSMTWVAISTSMAVEFKPAVVPMTTLGSAIVITGTLLYFLAQAFF 312
+EL + G+ HYL N + + ALS VHPVT A+G++M V I + + F+ V +GSAI I+G LLY L + +
Sbjct: 94 KELVKSIIISGLFHYLNNEVMYMALSNVHPVTLAVGNTMKRVFIMVASVLVFRNPVSVQAGIGSAIGISGVLLYSLTKQHY 174
BLAST of mRNA_A-nodosum_M_contig1009.25.1 vs. uniprot
Match:
A0A7S0I4T5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I4T5_9EUKA)
HSP 1 Score: 57.4 bits (137), Expect = 6.450e-5
Identity = 32/81 (39.51%), Postives = 52/81 (64.20%), Query Frame = 1
Query: 61 WTQEELPWRVAACGVLHYLRNVMAFHALSAVHPVTYAIGSSMTWVAISTSMAVEFKPAVVPMTTLGSAIVITGTLLYFLAQ 303
+T +L ++ G L+Y+ N +AF AL+ V PVT+A+ +++ V I + + FK ++ P+ LGSAI I+G LLY LA+
Sbjct: 352 YTNAQLIKLLSVSGFLYYIYNEVAFLALAEVAPVTHAVTNTVKRVVIILASILVFKTSITPLGALGSAITISGALLYGLAK 432
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1009.25.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 4
0 1 Expect = 1.88e-8 / Id = 37.74 Expect = 5.00e-7 / Id = 38.04 Expect = 2.10e-5 / Id = 39.51 Expect = 6.45e-5 / Id = 39.51 Sequence A0A835ZAU1_9STRA B5AJS9_GALSU A0A7S0BWP6_9STRA A0A7S0I4T5_9EUKA back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Seed ortholog 2880.D8LC95 Preferred name SLC35E3 PFAMs TPT Model size 2153 Max annot lvl 2759|Eukaryota KEGG ko ko:K06643,ko:K15283,ko:K15285 KEGG TC 2.A.7.9 KEGG Pathway ko01522,ko01524,ko04068,ko04110,ko04115,ko04120,ko04144,ko04151,ko04218,ko04919,ko05165,ko05169,ko05200,ko05202,ko05203,ko05205,ko05206,ko05214,ko05215,ko05218,ko05219,ko05220,map01522,map01524,map04068,map04110,map04115,map04120,map04144,map04151,map04218,map04919,map05165,map05169,map05200,map05202,map05203,map05205,map05206,map05214,map05215,map05218,map05219,map05220 Hectar predicted targeting category other localisation Exons 4 Evalue 7.54e-11 EggNOG OGs KOG1441@1|root,KOG1441@2759|Eukaryota EC 2.3.2.27 Description carbohydrate transport Cds size 321 COG category Z BRITE ko00000,ko00001,ko01000,ko02000,ko04121,ko04131
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866367.6192796-UTR-A-nodosum_M_contig1009:222266..223672 1680866367.6192796-UTR-A-nodosum_M_contig1009:222266..223672 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig1009 222267..223672 - 1680866367.6356096-UTR-A-nodosum_M_contig1009:225222..225645 1680866367.6356096-UTR-A-nodosum_M_contig1009:225222..225645 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig1009 225223..225645 - 1680866367.6800966-UTR-A-nodosum_M_contig1009:226640..226643 1680866367.6800966-UTR-A-nodosum_M_contig1009:226640..226643 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig1009 226641..226643 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866367.64734-CDS-A-nodosum_M_contig1009:225645..225803 1680866367.64734-CDS-A-nodosum_M_contig1009:225645..225803 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1009 225646..225803 - 1680866367.6591814-CDS-A-nodosum_M_contig1009:226019..226125 1680866367.6591814-CDS-A-nodosum_M_contig1009:226019..226125 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1009 226020..226125 - 1680866367.6692917-CDS-A-nodosum_M_contig1009:226583..226640 1680866367.6692917-CDS-A-nodosum_M_contig1009:226583..226640 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1009 226584..226640 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1009.25.1
>prot_A-nodosum_M_contig1009.25.1 ID=prot_A-nodosum_M_contig1009.25.1|Name=mRNA_A-nodosum_M_contig1009.25.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=107bp
MEGYKIKNAHDATGGMTLKWTQEELPWRVAACGVLHYLRNVMAFHALSAV back to top mRNA from alignment at A-nodosum_M_contig1009:222267..226643-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1009.25.1 ID=mRNA_A-nodosum_M_contig1009.25.1|Name=mRNA_A-nodosum_M_contig1009.25.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4377bp|location=Sequence derived from alignment at A-nodosum_M_contig1009:222267..226643- (Ascophyllum nodosum dioecious)GCG ATGGAAGGGTACAAGATTAAGAACGCGCACGACGCCACCGGCGGCAT
GACACTCAAG GTAGGTCTGTCGTCGTTCTTTTACGTACAGCTGTCGAGAG
GCTCTTCGGAAGTCCTTGTACGCGAGCGTGTCTCGAATCCGCAGTGGGCC
CTCTTCTCTTCTAGCCCCCCCTCGTGGTTTCGTTCGTGGTATTCGTGATA
TGATTTGGAGAATGTTAGTCCCATCTTTTTTGCTACCTTTTTGGTAACAC
AGGCACCATCATCAGTGGCCGTCAATGCTTTGACTTGGCGCCACGGAATA
CAGCGCAAGGTACTGTAGGTAGATCGAGGACACGCCGAGAGACGATACAG
TAAAACACGACACAACCGAGATTTCTCCAGCGGGTCTCTCGTCTCGTCTT
CGTCGGGACATTGGTGTCGCCGGTTTACACTCGGGACGTGAGATTTTCCA
TTGACCCCCCACTGATTGTTCTCATTTCCGCGTCGGTCTGTCTTTCACCC
CACCCCCTTTCCGTTTAGTGGACGCAGGAGGAGCTCCCTTGGAGAGTCGC
AGCATGCGGAGTGTTGCACTACCTGCGTAACGTCATGGCGTTCCACGCGC
TCAGCGCGGTGCACCCTGTCACCT GTAAGTCGAACCTTCCGCGCAAAAAC
GTCCTCCTTAGTTTGTCCTTAACCTCGGGTTTGTTTGCATAGACCTTGTG
TGTATGTGACGCTTCTGCTCGCGGGTCATAACACCTACGCACGGCTACAA
AACCGTACAAGCCGATTTCTCAAGCAGCATCCATCATAGAATGCACCGCG
TTCCCAACGCTCGTCTCAACCCTGCCCGACCACCCCGCAGACGCCATCGG
GAGCTCCATGACGTGGGTCGCAATAAGCACTTCCATGGCTGTGGAATTCA
AGCCGGCCGTCGTCCCCATGACCACGCTGGGCTCCGCGATTGTCATCACG
GGCACTCTGCTCTATTTCCTCGCGCAGGCCTTTTTCCCCAACGGCTAA GA
AAAAAGAAGCGGGTTGTCACAACACCATGTGCTATGATGTTGGCCAAGGA
CAGGGGCTTTTGAGCTCCGGCGGAAAAGGAGGTGTAGAGTGGGGACAAGA
CGCGTGGGACATCTCTGGTATGCAAACACGACGATCTCTGAAGCTCTCTC
AAGTTTTTGTCTACGACGCAGATTGCTCATCTTCTTGGGGAGCTATACAC
CGTCTTTTCATTTGTTGGCGGTCGCGATCGTGGGTCGACCTTGACGAGGG
TGAGGGTGATTTTTGATAGTTTGGGGAATGATGGATTCTCGTGATTCCTT
GGGATTATTGGGTAGTGTTGTGATCTGGTGGTGTACGGAGACGCTTTACT
TTGTTGTTGGTTTGATGCCGTGTATGTTGTGAGAGGAATAAGGAGTAGGA
TGCGAGTGAGTGTGGATGAAG GCGGTCTTTTCCAACCTCAGCACGGCGGG
ATCACCCGTGTGCTGTCGACGAGATGGAACTCGAGCGCGGTCGGCGCGGC
GACGAGAAGTCCTCGCGCGATGGATGATGGCCCCCCTCGCGTGCGTGGGT
TCCTGGGTGTGTGTTGTAGGCAATGGCCACACGATGTGACAAGAATGCGC
CTCCTGCGCGTTACGTGCAAAATAGCACGTGCTCTCTCGGCGCTGGAGGA
TGTCCGGCTGTATCAACGGGGGGCATTGGATGCCTGATCGCCCGGCTGAG
AAGAAAGGATAGCTTTACTGTACGTGTACTCGGAGATAAAAAAAACACAC
ACACACACACAATATTTCGGGGCAGGAATGACACTGCATACATTCAGTAG
CGAAAAAAGCTTGAGATATTTTTATTAGAACGAAGTTACAAGTATCCATT
GTATTCGTCGTGGAGATTGACAGCACAATGTAGAGTAATATATTTTGCAG
CATATTTTACATGGTACGACGTACCTGGTATTCGTAGAGGCCGCGTCTTT
TTCATGCCGCAAAAGATTGGGATTTCATAATAAGTTGCATCATTGATATA
GTGTTGCTGCAAAAACGCCTTTTTAGCTTTTTGACGGGCGGGGTTGGGAA
GACAACTTTCACACAAACCATGCGCAGCCGGGCGCGATCTTAGCGTGCAA
GTCATCTAGTGCTTAGGGCCGGCTCGTGCCATTGGAATACATTTCGTTCA
TTGTATATATAGTAAGGTAAGCACGACTGCTGAATGCTCCGTTGGAGAAG
GTTTGTTCACTTCATATCTGTAGTGCAGTGAATACAACAGATAGTGCTTC
GATTTTTTGCTATGATTTCTGTCTCGTCCATCCACTGGGGGTCTAAGGCA
AAAAGGAATGGTTTTGACAGTTCCGTGGGAATACCACAAAAATGATGTAA
AAAACCGTAGAAAAAAACGTAAAAACTGAGTTATTGAGCAGGGGGCCCAA
ATGTGGCTTATATTCCCGGCCGGAGTGGTACGACGCAAATTGATCATCTT
CTTGGGGAGCTATACACCGTGTTTTCATTTGTTGGCGGTCGCGATCGTGG
GTCGACCTTGATGAGGGTGATTTTTGATAGTTTGGGGAAGGATGGATTCT
CGTGATTCCTTGGGATTATTATTGGGTAGTGTTGTTTGTAATTCAAAGAC
TCTAGTGTAGAATAGGCGGAGCTTATGACTTATCTTTGCTAGAAGATAAC
GAGGCATCAGTGAAATACCACCCGGGGATCTGTTGGTTTACTAACTATTG
GACAGAGTGGTTGCTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAAAG
TAACGGAGGCATATAATGGTAGTCTAGGCTCATTCCCCGAAAAGGGAAGT
TGAGCATAATCGTAAAAGCCCGCTTGACTGTAAGAAAGACATTTCGATCA
GAGACGAAAGTCGATCATAGTGATCCGGTGGTATACGGAGACGCTTTACT
TTGTTGTTGGTTTGATGCCGTGTATGTTGTGAGAGGAATAAGGAGTAAGA
TGGGAGTGAGTGTGGATGAAGGCGGTCTTTTCCAACCTCGGCACGGCGGG
ATCACCCGTGTACTGTCGACGACGTGGAACTCGAGCGCGGTCGGCGACGA
GAAGTCCTCGCGCGATGGATGATGGCCCCCCTCGCATGCGTGCGTTCCTG
GGTGTGTGTTGTAGGCAATGGCCACACGATGTGACAAGAATGCGCCTCCT
GCGCGTTACGTGCAAAATAGCACGTGCTCTCTCAGCGCTGGAGGATGTCC
GGCTGTATCAACGGGGGCCATTGGATGCCTGATCGCCCGGCTGAGAAGAA
AGGATAGCTTTACTGTATGTATACTCGGAGATAAAAAAACACATACACAA
TATTTCGGGGCAGGAATGACACTGCATAGAGTCAATAGCGAAAAAAGCTT
GAGATATTTATCAGAATGAAGTTACAAGTATTCGTCGTGGAGATTGACGG
TACAATGTAGAGCAATATATTTTGCAGCATATTTTACATGGTACGACGTA
CCTGGTATTCGTAGATGCCGCATCTTTTTTATGCCGCAAAATATTGATAT
TTAAGTTGCATCATTGATATAGCTCTAGGCAGCATGTTTGCTCTTACCTT
GAGTATGGAAATTTGCCCACGTGAAGGCGCGTTAGTCGCAGTCCTCGAGA
AAAAGTCAAGCGGTGGTCGGTTTTACCTTTATGAGTTCATTTGGAAATAT
CTTGATGGAATGATGCCCGTGGACATGAAACTTCTCAGGTTACTATAGTT
TCTACCGCAGCAGCAGGGCTCTACGCAACGGTACAATAAAAGCGACGGAA
TATTTTGAGTTGTTTCACCCGCCCGAGCGTTGCCAGATGCAGTGTGATCG
AGATTGACGTAATCTAGTGTTGCTGCAAAAACGCCTTTTTAGTTTTTTCA
CGGGCGGGGTTGGGAAGACAACTTTCACACAAACCATGCGCAGCCGGGCG
CGATCTTAGCGTGCAAGTCATCTAGTGCTTAGGGCCGGCTCGCGCCATTG
GAATACATTTCGTCCTTTGTATATATAGTAAGGTAAGCACGACTGCTGAA
TGCTCCGTTCGAGAAGGTTTGCTTACTTCATATCTGTAGTACTGTATACA
GTGAATACAACAGATGTACTTCGTTTTTTTGTTATGATTTCTGTCTCGTC
CATCCACTGGGGGTCTAAGACAAATAAGGATGACTGCGCTGTTCAAATAT
TTCTCGAAGCGTTAGCTGAAGTGGTTTTGTGTTTGGGTTATGTCTGCAAG
TGCGCGCGTGTGTGTATGGTTCTTTATAGTGTCTGCGTTTTCTCGTGTCT
TTTATGCGGGAAACGTGTTTGATATTTTGGCAAGTTGTCATTATATTGTA
ACCATAAAATACATACGTGACCTACCATTGATTCCTTTTTTTACCGCGCC
ATCCAAGTCTACTTCGTCATCGAATAG back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1009:222267..226643-
>mRNA_A-nodosum_M_contig1009.25.1 ID=mRNA_A-nodosum_M_contig1009.25.1|Name=mRNA_A-nodosum_M_contig1009.25.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=321bp|location=Sequence derived from alignment at A-nodosum_M_contig1009:222267..226643- (Ascophyllum nodosum dioecious) back to top