Homology
BLAST of mRNA_A-nodosum_M_contig1006.7.1 vs. uniprot
Match:
D7G8X7_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8X7_ECTSI)
HSP 1 Score: 279 bits (714), Expect = 3.920e-88
Identity = 135/154 (87.66%), Postives = 141/154 (91.56%), Query Frame = 1
Query: 1 MARRLQKELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTGIQMLQEPHADNPLEADIARQLAEDKNAFDQTAKKWTHDFASP 462
MARRLQKEL ELRKNKLEWC+IQP DDDI+RW AMLVGP+DTPF GGCFNLEIEFPAEYPFKAPKV+F TRIYHPNVKTD+GEICSDILNENWGPTLNVTYVLNTIRQ MLQEPHADNPLEADIARQLAEDK+AF QTAKKWT DFASP
Sbjct: 1 MARRLQKELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFGGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQ------MLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFASP 148
BLAST of mRNA_A-nodosum_M_contig1006.7.1 vs. uniprot
Match:
A0A6V1MVK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MVK4_HETAK)
HSP 1 Score: 211 bits (538), Expect = 4.340e-62
Identity = 100/153 (65.36%), Postives = 122/153 (79.74%), Query Frame = 1
Query: 1 MARRLQKELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTGIQMLQEPHADNPLEADIARQLAEDKNAFDQTAKKWTHDFAS 459
MA+RLQKEL L K L++ PA DDI++W AMLVGP +TP+ GG FNLE++FPAEYPFKAPKVKF TRIYHPN+KTD+GEIC+D++NENWGPTLN YVL I+Q +L+EP AD+PLEADI RQL ED+NAF +TA KWT D+A+
Sbjct: 1 MAKRLQKELQALEKAPLDFVTAGPAGDDIMKWQAMLVGPANTPYEGGVFNLELDFPAEYPFKAPKVKFLTRIYHPNIKTDSGEICADLINENWGPTLNTQYVLTVIKQ------LLEEPSADSPLEADIGRQLTEDENAFKETAAKWTADYAT 147
BLAST of mRNA_A-nodosum_M_contig1006.7.1 vs. uniprot
Match:
A0A835Z9K8_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K8_9STRA)
HSP 1 Score: 208 bits (530), Expect = 6.450e-61
Identity = 100/153 (65.36%), Postives = 125/153 (81.70%), Query Frame = 1
Query: 1 MARRLQKELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTGIQMLQEPHADNPLEADIARQLAEDKNAFDQTAKKWTHDFAS 459
MARRL KELTELRK L+WC+ P DD+I+ W+AM+VGP+++P++GG F L+IE EYPFKAPKVKF TRIYHPN++T+ GEIC+DILN+NWGPTLN+++VLNT+RQ ML EP A++PLE DIARQLAEDK F +TA K+T DFAS
Sbjct: 1 MARRLTKELTELRKAPLDWCQCGPVDDNIMHWSAMMVGPDNSPYAGGVFQLDIEMSPEYPFKAPKVKFLTRIYHPNIRTEGGEICADILNDNWGPTLNLSHVLNTLRQ------MLLEPSAESPLEPDIARQLAEDKAQFLKTAAKYTADFAS 147
BLAST of mRNA_A-nodosum_M_contig1006.7.1 vs. uniprot
Match:
A0A024U3D9_9STRA (UBC core domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U3D9_9STRA)
HSP 1 Score: 205 bits (521), Expect = 1.340e-59
Identity = 93/153 (60.78%), Postives = 121/153 (79.08%), Query Frame = 1
Query: 1 MARRLQKELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTGIQMLQEPHADNPLEADIARQLAEDKNAFDQTAKKWTHDFAS 459
MARRL KEL E KN EWC + P DDD+L WNAM+VGPE+TP++GG F++++ FPAEYPFKAPKVKF TR+YHPNVK+ +GEIC+DI+NE+WGPTLNV + L ++Q ML++P ADNPLE +IA+ L +++ F+ TA+KWT DFAS
Sbjct: 1 MARRLAKELAEFNKNSPEWCTVGPVDDDLLHWNAMVVGPENTPYAGGVFSIDLVFPAEYPFKAPKVKFLTRVYHPNVKSQSGEICADIINESWGPTLNVLHCLTALKQ------MLEQPDADNPLEPEIAKLLHGNRDVFNDTARKWTKDFAS 147
BLAST of mRNA_A-nodosum_M_contig1006.7.1 vs. uniprot
Match:
G4YF85_PHYSP (UBC core domain-containing protein n=17 Tax=Peronosporaceae TaxID=4777 RepID=G4YF85_PHYSP)
HSP 1 Score: 203 bits (517), Expect = 5.140e-59
Identity = 91/153 (59.48%), Postives = 120/153 (78.43%), Query Frame = 1
Query: 1 MARRLQKELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTGIQMLQEPHADNPLEADIARQLAEDKNAFDQTAKKWTHDFAS 459
MARRL KEL E KN EWC + DDD++ WNAML GPED+P+SGG FNL+++FP+EYPFKAPKV+F TR+YHPNVK+ +GEIC+DI+NENWGPTLNV + L I+Q +L++P DNPLE +IA+Q+ E+K F++TA++WT +AS
Sbjct: 1 MARRLTKELAEFEKNSPEWCTVSAVDDDLMHWNAMLAGPEDSPYSGGVFNLDLQFPSEYPFKAPKVRFLTRVYHPNVKSQSGEICADIINENWGPTLNVLHCLTAIKQ------ILEQPDMDNPLEPEIAKQMHENKADFEKTAQEWTKQYAS 147
BLAST of mRNA_A-nodosum_M_contig1006.7.1 vs. uniprot
Match:
A0A067CHA9_SAPPC (UBC core domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHA9_SAPPC)
HSP 1 Score: 202 bits (514), Expect = 1.410e-58
Identity = 90/153 (58.82%), Postives = 122/153 (79.74%), Query Frame = 1
Query: 1 MARRLQKELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTGIQMLQEPHADNPLEADIARQLAEDKNAFDQTAKKWTHDFAS 459
MARRL KEL E KN +WC + DDD+L WNAM+VGP+++P++GG F++++ FPAEYPFKAPKVKF TR+YHPNVK+ +GEIC+D++NENWGPTLNV + L ++Q +L++P DNPLE +IA+QL +++AF++TAKKWT DFAS
Sbjct: 1 MARRLAKELAEFNKNSPDWCTVGTVDDDLLHWNAMVVGPDNSPYAGGVFSIDLLFPAEYPFKAPKVKFLTRVYHPNVKSQSGEICADVINENWGPTLNVMFCLTALKQ------ILEQPDGDNPLEPEIAKQLQCNRDAFNETAKKWTKDFAS 147
BLAST of mRNA_A-nodosum_M_contig1006.7.1 vs. uniprot
Match:
A0A835YRR6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRR6_9STRA)
HSP 1 Score: 200 bits (508), Expect = 1.060e-57
Identity = 96/153 (62.75%), Postives = 118/153 (77.12%), Query Frame = 1
Query: 1 MARRLQKELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTGIQMLQEPHADNPLEADIARQLAEDKNAFDQTAKKWTHDFAS 459
MARRL KEL EL+++ L+WC +P +DDIL+W A +VGP+ TP+ GG FN+ +EFPAEYPFKAPKVKF TRIYHP+V+T TGEIC+D+L NWGPTLNVT+VLNTIRQ ML EP ++PLE +I R L EDK AF + A K T +FAS
Sbjct: 1 MARRLTKELAELKRSPLDWCTCEPQEDDILQWTATIVGPDGTPYEGGIFNISLEFPAEYPFKAPKVKFQTRIYHPHVRTATGEICADVLLNNWGPTLNVTFVLNTIRQ------MLIEPSTESPLEPEIGRLLIEDKQAFIKNAAKCTAEFAS 147
BLAST of mRNA_A-nodosum_M_contig1006.7.1 vs. uniprot
Match:
A0A2D4CAW9_PYTIN (UBC core domain-containing protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CAW9_PYTIN)
HSP 1 Score: 199 bits (507), Expect = 1.480e-57
Identity = 88/153 (57.52%), Postives = 117/153 (76.47%), Query Frame = 1
Query: 1 MARRLQKELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTGIQMLQEPHADNPLEADIARQLAEDKNAFDQTAKKWTHDFAS 459
MARRL KEL E KN +WC + DDD++ WNAM+ GPED+P+SGG F+L+++FP EYPFKAPK++F T++YHPN+KT +GEIC+DI+NENW PTLNV + L I+Q +L++P DNPLE +IARQL DK AF QTA++WT +A+
Sbjct: 1 MARRLTKELAEFEKNSPDWCTVGSVDDDLMHWNAMVAGPEDSPYSGGVFSLDLQFPNEYPFKAPKIRFLTKVYHPNIKTSSGEICADIINENWAPTLNVLHCLQAIKQ------ILEQPDVDNPLEPEIARQLQSDKEAFHQTAQEWTKQYAT 147
BLAST of mRNA_A-nodosum_M_contig1006.7.1 vs. uniprot
Match:
K3W7Y2_GLOUD (UBC core domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7Y2_GLOUD)
HSP 1 Score: 198 bits (503), Expect = 5.680e-57
Identity = 88/153 (57.52%), Postives = 117/153 (76.47%), Query Frame = 1
Query: 1 MARRLQKELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTGIQMLQEPHADNPLEADIARQLAEDKNAFDQTAKKWTHDFAS 459
MARRL KEL E KN EWC + DDD++ WNAML GPE++P+SGG F+++++FP EYPFKAP+V+F TR+YHPNVK+ +GEIC+DI+NENWGPTLNV + L I+Q +L++P DNPLE +IA+QL ++ FD TAK+WT +AS
Sbjct: 1 MARRLTKELAEFEKNSPEWCTVGAVDDDLMHWNAMLAGPENSPYSGGVFSIDLQFPNEYPFKAPRVRFLTRVYHPNVKSQSGEICADIINENWGPTLNVLHCLTAIKQ------ILEQPDVDNPLEPEIAKQLQSNREEFDNTAKEWTKQYAS 147
BLAST of mRNA_A-nodosum_M_contig1006.7.1 vs. uniprot
Match:
A0A397DVW9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DVW9_9STRA)
HSP 1 Score: 207 bits (527), Expect = 3.270e-55
Identity = 94/153 (61.44%), Postives = 121/153 (79.08%), Query Frame = 1
Query: 1 MARRLQKELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQASTGIQMLQEPHADNPLEADIARQLAEDKNAFDQTAKKWTHDFAS 459
MARRL KEL E KN EWC + P DDD+L WNAM+VGPE+TP++GG F++++ FPAEYPFKAPKVKF TR+YHPNVK+ +GEIC+DI+NE+WGPTLNV + L ++Q ML++P ADNPLE +IA+QL ++ F+ TA+KWT DFAS
Sbjct: 1 MARRLAKELAEFNKNSPEWCTVGPVDDDLLHWNAMVVGPENTPYAGGVFSIDLVFPAEYPFKAPKVKFLTRVYHPNVKSQSGEICADIINESWGPTLNVLHCLTALKQ------MLEQPDADNPLEPEIAKQLHGSRDVFNDTARKWTKDFAS 147
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1006.7.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.92e-88 / Id = 87.66 Expect = 4.34e-62 / Id = 65.36 Expect = 6.45e-61 / Id = 65.36 Expect = 1.34e-59 / Id = 60.78 Expect = 5.14e-59 / Id = 59.48 Expect = 1.41e-58 / Id = 58.82 Expect = 1.06e-57 / Id = 62.75 Expect = 1.48e-57 / Id = 57.52 Expect = 5.68e-57 / Id = 57.52 Expect = 3.27e-55 / Id = 61.44 Sequence D7G8X7_ECTSI A0A6V1MVK4_HETAK A0A835Z9K8_9STRA A0A024U3D9_9STRA G4YF85_PHYSP A0A067CHA9_SAPPC A0A835YRR6_9STRA A0A2D4CAW9_PYTIN K3W7Y2_GLOUD A0A397DVW9_9STRA Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Seed ortholog 2880.D7G8X7 Preferred name ubcB PFAMs UQ_con Model size 1864 Max annot lvl 2759|Eukaryota KEGG ko ko:K13280 KEGG Pathway ko03060,map03060 Hectar predicted targeting category other localisation GOs GO:0003674,GO:0003824,GO:0004842,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009653,GO:0009987,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0032446,GO:0032502,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0048856,GO:0070647,GO:0071704,GO:0140096,GO:1901564 Exons 5 Evalue 9.68e-96 EggNOG OGs COG5078@1|root,KOG0417@2759|Eukaryota Ec32 ortholog description Ubiquitin-conjugating enzyme/RWD-like Ec32 ortholog Ec-15_004630.1 EC 3.4.21.89 Description protein modification by small protein conjugation Cds size 465 COG category O BRITE ko00000,ko00001,ko01000,ko01002
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866363.9588964-CDS-A-nodosum_M_contig1006:78793..78814 1680866363.9588964-CDS-A-nodosum_M_contig1006:78793..78814 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1006 78794..78814 + 1680866363.9701574-CDS-A-nodosum_M_contig1006:87144..87240 1680866363.9701574-CDS-A-nodosum_M_contig1006:87144..87240 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1006 87145..87240 + 1680866363.9783018-CDS-A-nodosum_M_contig1006:88701..88779 1680866363.9783018-CDS-A-nodosum_M_contig1006:88701..88779 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1006 88702..88779 + 1680866363.9890046-CDS-A-nodosum_M_contig1006:89538..89685 1680866363.9890046-CDS-A-nodosum_M_contig1006:89538..89685 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1006 89539..89685 + 1680866363.9998343-CDS-A-nodosum_M_contig1006:90074..90197 1680866363.9998343-CDS-A-nodosum_M_contig1006:90074..90197 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig1006 90075..90197 +
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866364.008113-UTR-A-nodosum_M_contig1006:90197..91596 1680866364.008113-UTR-A-nodosum_M_contig1006:90197..91596 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig1006 90198..91596 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1006.7.1
>prot_A-nodosum_M_contig1006.7.1 ID=prot_A-nodosum_M_contig1006.7.1|Name=mRNA_A-nodosum_M_contig1006.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=155bp
MARRLQKELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFN back to top mRNA from alignment at A-nodosum_M_contig1006:78794..91596+
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1006.7.1 ID=mRNA_A-nodosum_M_contig1006.7.1|Name=mRNA_A-nodosum_M_contig1006.7.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=12803bp|location=Sequence derived from alignment at A-nodosum_M_contig1006:78794..91596+ (Ascophyllum nodosum dioecious)ATGGCGCGTCGACTACAGAAG GTATGCAACGAACAGTTATAATCTCGATG
GGCGCCGAGCCCGGGATGACGCTCTGCGCTCCCTGTACCATTGTTCTATA
ACTTGCGGCACCGTGTAGATTGCTTCCCGTGGCTCGGCGAGATTCAATCG
ATCGAAAGACTCAGCGCCTTTCAATCGTCGTCTCAAAAGGTACCTGTTGA
GATAAAAGCTACTGTTGTACAGTTAGTAGCTATATATAGAATTACGTACT
AAAGGCTCTCTATATTATAGTATACCAGGTACAAAATATTACCTCCAAGT
GCTGCACACCTCTAAAGAGCAGTAGGCTCTTCGTACCTGTGGAATTCAGA
TGCCTTCGGAATAAATGTATTCGCGATATCTAATGCCATTGCCTCCGAGG
CCCAAGATTCCACAGACGACGTGCACTCTACAAGCAGTCGAGGTCTTGAT
GTTCAGTGGTGCTTAACGTACAACCAGTGGTATAAAACCGACTACTCTGC
GGTACCTTGCCTTTTCAAGTTTGCGGTTGAAGAGGAACAAGCAGCCGCAC
GATCGGTGTGCCTCGCGCTGACACATTTCCATTCTATCGAAGACGTATTT
TTCAGAAATCTCCTGCTGCGTATCCGATTTGTGTCAGAAAAGGACAAAGA
AAAATCTGAAAAACCTTCTGAGCATCCCCCAGTCAGGGGGAAAAATGTCA
AAACGTTCAGGTGGGATCATAGGCTGCAAAGACAAAAACCTCTTCACGGC
ATTTTAACGGGTCCCCCGATGGTAGTAACATTGGGTCAACAGTATAATGT
CGGGGACCTACATCAATCGCCATGCAGGGACACCAAACGAAAAGTTTGTA
CCTGGTAGTACATAATGAAGTAGATCAACGTTGTGGAGTTGACTTCTGCA
CGACTACAGGTTGGCCGAGCAGCGCATCCCTTTACAAAATAAAACTTGCA
GTACTTTAGTAATTCGAACTTTTGATGACGCAACATTTTCTTTAAACACG
GTCCACTGGTAAAATCAAGTACAAGCAATAATGTACTGTAGGTACAGAAT
TGCTCTATAAAGTACATACTATGTCTATCCCAACGTATACTTTGTACGAT
ACAGAAGCACCTGTTCGTCAGGCAATGAACGCGTGTCTACAGCAGTGCCT
CACCAGCTAGCCATGTCAATTGCATTTTTTACGCAGCAAGGTGTTACAAA
AAAAAAGTGTTGTAATTAGGTACTCGTTCGAGGGACAGAAGACAGTCTCA
TCGTACGAATGAAGTCTGTAGGTTTGGTTCTTGCGGATCATATATCCGAT
ATCATCATCCGACACTTCCTCTTTGTTTCCTTGAAGTGCACGGTCTTGCG
TACAGTAGTACCTGTACACTGGTCTATGTGTGACCTTGTTTTTCTGAAAA
TACATCCATTAATTGGTCGATGGTGATACTCGAAAAAGGCAGTGGTGAAA
AAAATCCCAGTTCGTGTGATTGCACCGAGATTCGAACTTACGTCCCAACG
TCAGAAGGTTTCGAGGTTACCAACTGAACCACCGGGGCGACCATCGGTTC
GCAACTGCGTGACCCGATAAACCCGGGACTGATCCAATGGCGGTTGGCGG
TATAGATATAAGGACGCCGGCGCGGAAATCGGGAGGAATCCCGTTAGTAA
GACCAGATTCCGCCTGGGGGTGGAGAATGAGCAGGCTGATGCGGGACGGG
ACGGCCGAACCCGTCTCGCGAGACCAAATTCTCTGGCACGATCGAGGACA
GCGAATAATGTATTCCCCCTGTTCAGCTGACCACGAGCAGGATTGGCCAC
CTTACCCGGTCGATCCATAATCTGCTATAAGTGATTATGACCATACGGAC
ATGCATAATGTGCTACACACCACTACACCGATAGTGGTATTTAACATTTA
TTTAGCAGTATACATCTCGCCCCCTCGGGGTATGAGTGTGGGAGGGTCTT
TTCCGTGGATGCAGGGCTGGAGTCACCCTCAAGAGATGCAACCAACTGGC
TGTCGTCGCGATTCAGCCAGTCGGTTGAGACGTGGTGGCGGTATGGTTGG
TTGAGAATGGTGTTCACCGGGTGCGCCTCTTCCAAGCTCCAATTTGTTGG
CCTTCGGGAGTTGGTGGCACGCGAGACGCAGGGGGCACTGTCGCGGAAAG
CCTGGTAGAGTGCAGCAGCACGCGCAGGCGGATCGTGTCAAGCTCTATTG
GGCGAACACGCACCAGATTTGGCGAGGGTGGAGGGCAGCTCGATCGTTGA
CGGGCCAGAAGGGGGTGCTGAACCCCTGTGCGCGAGAATCAAAGGCGCGA
ACTGGGAGGTTTCTGAGGGAAAAGCTCATCTCTGACCACGACCTGTTTTG
TTCCTACGAGGGCCAAGAAGGAATGGGGAACGGGCAAGACTCGTGGGACA
AATTTCATGGATGCATCGGGCTTTGGACGGCGGCATGCTGGCTCGCGCGC
CGGCTTCACCAACTCAAGGCCTCCACCGCCATGGACCTCCATATTTCAAT
TCTGTGGCCTTGAGACACTTGGACTATTTGTCCGCTTTGTTATTGAAAAG
GCTGGTTGGTCGTGGGGAGGCCACAGCAGTCCGAGTTGATCGAGGTTGTT
CTCAGTATGGAGTGAGGAGGTTTGATGAACGGTTTTGACATTGGTCGGTG
CCATTGCTTGAAAGTCTCGCTTAACTTGTCTTCGTGTAAACCTCCGATAG
TTAAAAAACTTGATGACTTTGGTGGATGGGCAGCACATTGGATAGCCTTC
TCTGTAGCTTGTAATTCAGATTCTGAAATATTGGCAGCACCCCAGACAGC
AAAAACTGTAGTTCGTACCCAAAGACATGTCTTGACGCCGATAAGTTTTC
GATGTTCTCGGTTGGTTGGGCCTGGCACGGATTTTGTCCCGATTTGGATC
TAAACGATCAAAATAAGGCAAGGCCTGGACATACGTTTTAGCCTCAATAC
GTTTCTCCGTATCTCTATGAAAAAGACCTATATGGGGATCAGCTCTCTGA
ACGACTTCCCCATTTAATTCAAGAATAAGACGAAGAACCCCATGTGCTGC
AGGATGTTGAGGTCCAAAATTTATAGTAAAATGTTGAAGTTTTTTTTCAA
ATTCCTTTTTTTTAACGCCATTCTAACATTGTCATAACTTTATAAAAAAA
TATTTAGCGCCAGTTGGATTTGAACCTACGACCTTCAGGGCATGAGCCTG
ACGAGCTAACCGTACTGCTCTATAACGCACATTTTTGATTAATACATATT
AATAATAAAATAGCCGTGGTTCTCAAGATTAACTAGTATGTATGGCAGCC
TAGGCAAGGACACTCGAGTTCGGTTAAGGGTTCGGGTAGGGGCCTAGGCA
TGAAGGCGAACCTCCAACAATATATATATATTCCAGCCGCAGGTTCCCCT
ACGATTACCTTTTTACGACTTCATCCCAGTTATTTATCTGTCCTTGTCAC
CGTGATGTGACCCGTTGAACTCCGTGCCTTTGTGACCACGAGCGGGGTTG
GCATTTAATAGGTCTATGGCTGACTTGTTACGTTACCGTCGTTTCCTACG
TTGCAGTACAACACGCTGAATGTGTGAATCAGTAACAGTAACTGTGGTGA
GCCGAATAGGGAAACTTAATTTTTCCCTGTCCCCGTTCCCTCCTGATTGA
TTTGGGCGTGTGAGATTGGGTCGGCCGTCCCGTCCCGCGTCAGCCCACTC
ACATTTCACACCCCAGGCTGAATCTATACGACTACAGCTCCAGGTATTCA
GTTCCCCTGTACTTCGTTTACTGTAGTTCAATTTCTCGAGGTTTTTAAAG
AAAAATCGGAACGTGTCCAGACCTTGTGAGCATCCCCCAGTCAGGGGGAA
AAAATGTGAAAACGTTTAGGTGGGACCATAGGCTGCAAATACAAAACCTC
TTCATAGCATTTAAACGGGTTCCCCGATAGTAGTAACATTGGGTCAACAG
TATAATGTCGGGGAGAAGCCCACCGTTATACTGTACACATACATTAATTG
CCATGCAGGGACACCAGAAAAACATCAAAAACAAAAACAATATAGTACAT
CAAACATGGTAGTAATATATAATACTGTTACATAGGCCGTAAAGACAAAA
TTTCTTCATGGCATTTAAACGGGTTCCTCGACGGTAGAAACCTTGGGTCA
ACAGTATAATATCGTGGAGAAGCCCACCGTCATACTGTACACTTAGATTA
ATCGCCATGCAGAGCCACCAAACATAACAAGACATCAAGACATTGTAGTA
CATATTTAAGAGCGTAGTAATAATATACGATAATCGTGCCATCGAACCAT
ACAAAAATAGGGGCTTGGCTCTAACATGGCAGTATATACTGTTTCATAGG
CTGTAAAGACAAGTCCTCTAGATGGTGTTGTATTAATCGCCATGCAGAGC
CACCAAACATAACAAAACAGAAGACACTGTATGTAGTACATAGTCAAAAG
GGTAGCAATAATATACGATAATAGGGCCATCGAGCCATGAACAAATAGGG
GCTTGGGTCAACAGTAAGATGTCAGGGAGAAACCCTCCGTTATACTACAC
ATTTACATTGTTTGCGAGCAGGGACACAGCAGGGACACCAAACAACGACA
AAAGACACGATAGGCTTGGATTACAGCTCACTTTGTTACATTGCGTCTAG
GATCGGATAGATGTCGATGAAGGGAATCTACAAGTAGTTACCTGGTACAG
GTGTAGGGGTGATACTGGAAAATTGTCCAGTAACTATTTTATTAGTGTAC
AACAAATATAAAAATGCCCAACGGGTGGAGAACGATTAAATCGATAGTAC
ACAAAATTCGACTTCACGGTTGACGAGGGAAAAGAATGGCTGAATCCTTC
TCGCGAGAAAAATTAAGGCACGCACTGCAGAAAGAAGGTGGATGAAAAAT
CCTGTGTGACTTTCCTCCTGTGTGACCCCGGCTGGTACGTCCAACGAACT
TGATGTCCAGAATGAATGGGAAGAAAACACACAACACACACACACACACA
CACACACATACATTACAGTACAGTATAGTACCAAAGTAATAATAGTATAT
GATAACAAGTGTCAATAGTTCTGATTTTTCTTTAAACACCACAATACATC
ATGAGCTATAGTGCAGTACATAAGAACGTTATGATATTATCGGATTGGCA
ACAATATTACATTTTCGTTTTACACCACTAATAGTCATGGCCCATGGGGG
ACTTTATGCTATGCTATGTTATCTACATGTATTCAGTACATGTTTGTAAT
ATTCAAGTTTCTTTCATCTCCAAACTAGAGCCGCGCAGGCTTCCCACCCG
CCCACCCCATTTGACCATTTGATCTAAAATTCTGCAGCAGACGCGAGACG
CTCTACAGATACCGTACAGCAAATGGTCGGTCCAGCATTCTCAGCAGAGA
ATCAACCAAGTACATACTTGCCAACCCTTGAACTAATTAGAGGAAAAGCA
TATTTTTCCCGCGTCCCCGTCCGCGCCTGATAGTTTGGTCTCTCGAGACT
GGTTTCGCCGTCCCGCGTCAGCCCACTCGTTCTCTACACCCCAGGCTGAA
TCTTATGGTTACTCATGAGCCGTCCCGTCCATCTATACACTGCTATCGAG
AGCCGTCGGGTCATCGCGTACAGCAGACTAGGCACGAACCGGTTTGGTTG
CCAGTCCTTCTTGTGGTCAGCTGAACAGGGAGAATAATTTTTCCCGTGTT
CCTGTTTGCGCGTGAGAATTTGGTCTCGCGAGACAGGTTCGGCTTCCCGT
CTTGCGTCAGTACGCTCATTTTCCACACCCATACTGAATCCGATTGGTTG
GTGCTTACTCATCACGGGCTCCTCTCTCTCCTCCCGCTGTCCGCGATGGC
GTCATAGTCCATCTATACCGTCAACCGCCTTTGGGTCAGTCCCGACTAAA
AAAGAAAAATATGAAGGCATCTAAACCTTCTGAGCACCTACCCGATCAGG
GGGAAAAAATGTCAAAACGTCTTCTTAGGTGGTGACAATGGCTGCAAGGG
CATAAACTCTTACGGATTTATTTGGGTTCCCTAATGGTAGTACGGTAGTA
TAGGTTCAATATATAACAAAATCAGGAAGAAATCCACCGTTATACTGTAC
ACTTAAATTATTGCCATGCAGGTACACCAAAACAAAAAAGGGAAACGTCC
ACCTGTACACTTACATAATGGCCATGCTGGTGCCTCAAAACAAAGAGGGA
AATGTCCACGCTGAACAAAAATAAGACTCGGTTATATGTTATATTGTGTT
TTGACATCGGGTGAAAGTATCGGGGAGAGAGTGTCGAAACGTTGAAGATG
GAAACCTACGTAGTCTGCAAAAACAAATACAGTATTGTGTTTTGACATCG
GGTGAAAGTATCGGGGAGAGAGTATCGAAACGTTGAAGATGAAAACCTGC
GTAGTCTGCAAAAACAAAAGGTCTTGATGGGATTTGATTGGGTTCCCCGA
TGGCATAATCTTGTTTTACCTATCTGGCAATACCGCACCAGCAGGGTGAG
GGGCGGGAGGGGGTTTGTGCTGCCAGACTTTTTGTTTTTGTTTCTCTATT
TTCCCTGTTGAGCAGACCACGAGCGGAATCATCCACCATTGTAAAGTGGT
TTTTTCCAGGGTTGGCAACCAATTATTTCTACGCTGAATGTAAGAAACAA
CAGGACCTGAACTGGACGGTTAGGTAAGGTAAGGTAAGGTAAGGTAAGGT
AAAGACACGAGGGCAGATGGCATCACGGATCCTTGCAACAACGCTCCACG
GGTGCAGAATTCATACCACTCGTATCCTCCAACATTAGGCTCTAAGCCAG
CTGCAACCAGCAAGAACATTAAGAAATAAAGACAGAGCGAGGCTGCCACG
GGGGCAAACGCCTCTTTTAGTGATGCTGAGTAAAATCGCCGGCTGCCGCG
GGTAGGCCCATATATTTTAGGGGAAAATGACCGTAAACCCGCCTCGACAA
CGCCGCCGCCCATTCACTTTTAGGTGGTGCAATTTGTCTTGTTTTTGATC
TCGCCGAGAAGTGCATCAATAGTTAACAATACAAACCGCGCAAGCGATGT
ATCCCAAGCCTTGATGTATGGGCAGAGTTGTTTAGGCACACAGACGCGGG
GCGGGACTGCCGAACCCGTCTCGCGAGACAAAATTCTCAGGCGTGAACCG
GGACAGGCTGACCAAGAGCAGGATTGGCAACCTCACCGGGTTGATCCTTA
CTTTTGCTACATTTGATGACCATACATACATACAGAAGACCGCGCGGTTG
AACTTCAGTTTTGATTTCGATTTCGATTTCGATAAAAAAAAATCGATCCC
ACTTTCGCGTTAAGACAGTTGTGGCGGCACCTGAACCAATCCGTCTGTTT
TCACCCGTTGTTAATGTATATCAAACTCTAGGGCGAGGTTTATAAGTCTC
CCTTAAAATAAATTTTGGTGTCTCTCTATGACCTCACTACTGTAATCCCG
AAGTGCATATATAATGTATACATACACTAACATAATCTTACTATACTTGC
TTTTGTTACAACTGCATAATGATTAATGTACTTGTATAGTTCCCTCTCTG
ACCCTATTGAATTTCCGGCTGTCGCCTCCCATCAATTTATATCAATAACG
AAGAACCTCACCTAGATACTAGTATACTGGTATATTTAATTTTACTTTAA
TTTCTCTAAGATCATATAGAACATATTACTACACTGTAGTCCAGGACTTT
TAGATAAAAAGGATTGTGGTTTTGGTGTCCCTGCATGGAGATTAATGTAA
GTGTACATTATAACGGAGGGCTTCTCCCCGATATGATACTGTCGACCCGA
TGTAGTTACATTGGGGAATCCTTTTGATACCATGCAAGAGGTTTTGTCTC
TACAGCCAATGTTCCCACCTAAACCTTTAGACACTTTTCTTCCACTTGAG
GTGGATGCTCAGAAGGTTTAGATGCGTTCAGATAAATCCGTTGTACCTTG
GGTTTAGGGTTTGGAGAAAGCAAGTATTTGCGTATCGCCTTTTTTAGCTA
TCGGGTCACGCAATTGCGTGCCGATGGCGTTCACTTGCCGAGAGCCCGCT
GGCGCAGGGACCAAAATTCTCAAGGTAGCGCTATATTAGTAGTAACGGGG
CTTCTTTTCAGGAAACCCAACCCGGTGGACGAATGTTTGTGCGGCCCTAC
TTGTGACTATATCGGAGGCGGTAGAGGAATTTTTGTTTCGTCGTGCGTGA
TGTTCCCTCAATCTCCAACCATGAATATTTCCCCCGTCGAAGAGCACTCG
ATTCTGGACTACAAGTTATGGAACTGCTCTGTGTTTTCGCTGTGCTAATT
CTGCACGATCGATGTACCGTGTCCCCCGTCCCCCCCCTATGTCGATTGCA
GGAGCTGACGGAACTCCGAAAGAACAAGCTTGAGTGGTGTGAAATCCAGC
CGGCGGATGACGACATCTTGCGATGGAATGCGATGCTTGTAGGACCG GTA
AGAGAAACGCCTCCAGTCTGTCGCCTGAGATGTGGAATGAAAGGAGGCGT
TTGCGGTGTCCGGATCTAGTTTCTTACTTGTCGAAGTACTACTGTACGAA
CAAGTATTATTTTTGTACTAGTACTGTTAGTACACAAAATTCGACTTCAC
GGTCGACGAGGGAAAGGAACGGCTGAATCCTTCTCGCGAGAAAAATTTAG
GCACGCACCGCAGAAGGAAGGTGGATGAGAAATCTTGTGTGACCTTCCTC
CTATGTGACCCCGGCCGGTACATCCAACGAACTTGATGTCCAGAATAAAT
GGGAAGAAACACACACACTGTTAAATACTCGAGTATAATAGTACAAGGAA
GGGGGGGCGTCGTATAATAAAGTGGCCGTAGAACTGTACCTGGTATATTG
TAGTGTATATAGCAGGGAACATACCGCACTCATCCTGGGTTTTCAAGACA
AGTCGTGTGGCGTGATTATTCTACTAAACTATGTAACGACATTCGTAGCT
TAACTCAAAATAATCAACTATGTGTAAACCCTTTTACCAGCAGTAGTGTT
AACGCATGTACCGAGAGGTGTGCTAGCTACACTTGGTAGATACAAAACGA
TAAACTACTTCCTTTGATGGTGAGATTTCTGTGGAGAAAAAATTGTTGGC
GTAGATCTCCATTGATGGAAGATGGCAGTCCATATCCCGATTGGGCATAT
TTCATATTTTTAGTAGGTGGGAATAGCTCCCTTGATACTGTAGTAAGGTG
TTAAGTTGATTAGATCAACCAGAGTATCCAAGACCCAAAGTTTTTCCGGA
AAACCTCTCAGCCTGGGGCTCGAGGCAGACAAGTCAGCACTGACGATTAA
TAGTGTAAATTGATGAATTGAGGCCGCTAAAGTGTCAAAACAAAAAATGC
ATCAGCATCCTGATGCAGTATGACAGCTACAGCAAAACGAATTGAGTCGA
TCCTCGACAGTGTAAGGCGTTATACACAATGGTCTTCATCATAGATGGAC
GCCGTCGCGGAAAGCGGGCGGAATCCCGCGGGTAAGCACCAAATTCTACC
TGATTGTGGAGAACGAGCAGGCTGATGCGGGACGGGACGGCCAAACCCGT
CTCGCGAGGTAAGTGCTCAGGCGATAGCGGTTATTTTCGCAGTTGAGCTG
ACCACGAGCAGGATCGGCAACCTCACCCGGTTGGTCCATACTCTGCTGAA
AGTTGTTGTTGTTGTTGTTGTTTCGCACATTCAGCGCATTGGTTGCCAAC
CCGAAAAAAACTACTTTGCACGGTGGCCAATCCCGCTCGTGGTCTGCTGA
ACAGGGGGGAAAAAAAAAAGTCTGACCTTATATATATGTCCCCTCTTCAG
AGGGATCCTACCTGTACAGTACAGTAGCTGCGTTCATTTTTCCTTGTGGA
CTCGAGGTACAATGTGCGAAAATGTTCTTGTTTTTTTGCGTCGTGTTCCC
GCGTTCAGGAGGACACTCCTTTCAGCGGAGGTTGCTTCAACCTGGAGATT
GAGTTTCCTGCCGAGTACCCTTTCAAGGCGCCCAAG GTGCGCGGCGGGTC
CGATCTCAATCAAGACATGGTCTGGTCCTCATCCGAAAACTAAACGATTA
ACAAGAATAATATTTTGCCGTCACGCGACGGAGACGCGATATTCTATATT
GATATTAGTAGACTAAATGCATTAATTGGTCGTTCAGAGCCGTTTTTTTT
GTCATTACGAAAACCCCAACTTTTCATAGTAACATCCTCTCCCTGGCTAT
CCAATATCCATTCTTGTCACCTTTAATTGCAACCCGATCGGTGTTTGGGC
TGATGATTTAGCGGGGCGCACCAGGTCGTCGTCTTTCGCTTGGTCGTCCC
TCAGCGCTTGTTATTTTAACAGTATATTTATACTACTTAGGCCATAGCGG
TGTGTATATTCCCACTTCTTGCCAACAGGGATCGCCGCACGCCTCTCCTG
TATGAGATTTTTCTTTAAACAGCAGTCGTTTGTTGGTGTCTTGCCAAATT
TTGCCCGTCTGTTTGCTTTCCTCGTCAGAAAATAACCTCGTGGAGTAACG
GTCGATGGTGCTTTTTGTGCGACATCCTTCGCTCGTGGAACTCCTTGTAT
CGTAGAAAAAAAAGGGGTGGAAAAAGATATCCTCTCCCTTCCCCCCCTAC
CCCTCCACCCCGTCTCCGAGACCAGCAGGCGGACAAAGTTGGTCGATTTT
TCTTGCTCGCGCCGTATAACGTTTCACGTCTTTCTTAACGACGCTGACCC
TGCTCACCGCCCTGGCTGTTGCCATCGATCTTCCTCCGCCGAAAGGTGAA
ATTCGGTACCCGCATCTACCACCCAAACGTCAAGACCGACACGGGGGAGA
TCTGCTCGGATATCCTGAACGAGAACTGGGGACCCACTCTCAACGTGACG
TATGTGTTGAACACCATCCGTCAGGCGAGTACCGGTATTCAA GTGCCAAG
GCACCTCCTACGGTAGGGGAGGTATACTCGCTTTCAGCCTCCCTCAGTCA
AAGACGAGACGGTTCGAGCGTGCGTGTATTCGTTGGAGAAATTTGAGCCG
GTGATTTTTTATCAAGTTGCCGTAATCGTCCTGTCTTTTGAATCGTATTG
CATCGAAGTCGGGTTTGGCGACATGAGGTGCGTTCTTTGTCCCATTGAGG
AGCACGCTACGGCACTAGAATTGACGGGCAAATTTACCCACGCGGATTCA
CCGACCGGTGCGAGGATCTATCGACGAAGAGTACTCTCGCTTAAGAACGC
CTCCGTCAACTCCTCGCCCCTCGTGTCCCTCCTTTTCTCTCTGACGAAAC
CGACGACTGACAACAACGGTTTAACAAGTAGATGTTGCAGGAGCCACACG
CGGACAACCCGCTTGAGGCAGACATCGCGAGGCAGCTGGCGGAAGACAAG
AACGCCTTCGACCAGACCGCAAAAAAGTGGACGCACGACTTCGCAAGCCC
GTGA CAATGGCCTGAGGAAATTTTGAGCTGAGGGTGGGCGTTGGCAGACA
TGTAGAAGGGGTTGGGACTGGCTTCAAGCTGGAGAAAGGGAATGGCTCCC
TTTGAAGGGATTCACACGCTGTGGGCTTCATGGCAGGCCTATACTAGTAA
CGTGTGCAAAGCAACGGGTTTCGTTTTGCGTGCTCGCTCCTCGCGTTTGC
AACGCACAGTTTCCATGTGCGAAACTTGAGGGTTTGCTTTTTTTTCGCCG
AGGAGGCCGTTTTCAGGGCAAGAGCGGGCACGTTTCGGTCGGGGGAGAGG
AGGGGACCGAAGTCGCCTGGTGGGGCATAGTTTCTTGTCAGAAAAAAATA
TAATCGAGTGTGCCATTCCGGCCAAGGCAAACAAAACACCATGGGGCGAG
GGGGCGTGAGCAAACGGAGCGGTGCCGGCCGCGTCGAGAAGTCGGGAAGG
AGCTCTGGTTTTGGCTGGGAATGCCCGTGTGAATCCGACCACACGTGTCT
GCCCTGCGCTCTCCTTCCGGGCAGAAAGAGTAGGCTAAACCAACGGACCA
AGTTAAGCTGTACTGTTTGTATTTATTGGCTTCAGGAAAACTCGAGTGTG
TCTTTTTTGTGTTATGACTCCGCCCGCATCTGCTGTTTACTGTACTTTTT
GTGTGATGGGACGAGTAGCGGGCTATAGGCTACAGTTAGAAGGGTAGCTC
TAGCGGGACGCCAGGCAGCGTGAAATCGGGCGGGGGAGAATTCGGGACCG
ACTCCGTTTTCGTTACCGAAGCGTTTCAGCAACCAACCACTGTATAATCA
CAGCAAATTGGGACGTTATGACATCATCGTGTTGGCAAAACTCTTCCATC
GCCTTTTCGCGTTCCCCGCCTCCTTCACACTTCTATTTTTAGCTCTGCTG
AGGCAATTGTTAATTCTAGGAATAATAACTATTTTCAGCCCTGGTTGAGG
AATTACATATCCTTGCCTTACACTTACGGGTAGGCATTGTGCCCCTATGT
GTACGGGGACTGGGGTCGGGGGAGGCACCCGTACGCAACAGCCGAAAGGC
TTTGCGCCACCTCTTATACACTACGTAGTATATAAGTATGCATGTAAGGT
CACCACACGTATTGTAGTAAATTGGGCATTAAGTGGGTATGGTTGCCAAT
CCTGCCCCCCATATGCGCCTGAAAAGTCTAGCGAGACAAGTTCGGCAGTC
CCGTCGGGCGTCATCCCGATGATTCTTTTAGCCCAGGCTGAAATACGAAG
TATCAACGCGTTAGGGTGCTGGTAGCCAACGGTGTTAGAAACTAAAATAT
GCGTTTTCTGTAACTCGTACCGGTAAAAGTGTGTGTGTTTCGCCCCTAGA
TTCATTCAATTAAAGTACAGAGGGGCACCGAAGATACCAATGTTCAAAAC
AGA back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1006:78794..91596+
>mRNA_A-nodosum_M_contig1006.7.1 ID=mRNA_A-nodosum_M_contig1006.7.1|Name=mRNA_A-nodosum_M_contig1006.7.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=465bp|location=Sequence derived from alignment at A-nodosum_M_contig1006:78794..91596+ (Ascophyllum nodosum dioecious) back to top