mRNA_A-nodosum_M_contig1005.20.1 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1005.20.1 vs. uniprot
Match: A0A6H5KR31_9PHAE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR31_9PHAE) HSP 1 Score: 351 bits (901), Expect = 4.410e-117 Identity = 174/214 (81.31%), Postives = 190/214 (88.79%), Query Frame = 1 Query: 4 APGRAFVHGGGAIHASSQARFAAASTLRGGQTGSPGTATG-RSSRQTLAMANPQVFFDMDAGGEALGRITMELRADVAPKTAENFRQLCTGEGGVKGYKGSAFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFQLSHNGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLESLGSPSGKPLTTVTVKDCGQL 642
AP FVHGGG++ S+Q+RFAA S +RGG + A G RSSRQTLAMANP+VFFD+DAGG+ +GRIT+ELRADV PKTAENFRQLCTGEG VKG+KGS FHRIIPQFMCQGGDFT GDGTGGESIYGRTFPDENF+LSH GPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLE+LGSPSGK T VT+KDCG+L
Sbjct: 17 APALGFVHGGGSMVGSAQSRFAATS-VRGGHSAPRAAAAGQRSSRQTLAMANPKVFFDIDAGGKDMGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 229
BLAST of mRNA_A-nodosum_M_contig1005.20.1 vs. uniprot
Match: D7FHE4_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE4_ECTSI) HSP 1 Score: 306 bits (784), Expect = 3.910e-100 Identity = 142/160 (88.75%), Postives = 151/160 (94.38%), Query Frame = 1 Query: 163 VFFDMDAGGEALGRITMELRADVAPKTAENFRQLCTGEGGVKGYKGSAFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFQLSHNGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLESLGSPSGKPLTTVTVKDCGQL 642
VFFD+DAGG+ +GRIT+ELRADV PKTAENFRQLCTGEG VKG+KGS FHRIIPQFMCQGGDFT GDGTGGESIYGRTFPDENF+LSH GPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLE+LGSPSGK T VT+KDCG+L
Sbjct: 21 VFFDIDAGGKEMGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 180
BLAST of mRNA_A-nodosum_M_contig1005.20.1 vs. uniprot
Match: A0A7S1D0F5_CYCTE (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0F5_CYCTE) HSP 1 Score: 269 bits (688), Expect = 3.860e-85 Identity = 124/164 (75.61%), Postives = 142/164 (86.59%), Query Frame = 1 Query: 151 ANPQVFFDMDAGGEALGRITMELRADVAPKTAENFRQLCTGEGGVKGYKGSAFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFQLSHNGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLESLGSPSGKPLTTVTVKDCGQL 642
ANP+VFFD++AGGE +GRIT ELR+DV P+TAENFR LCTGE G GYKGS FHR+IPQFMCQGGDFT +GTGG+SIYGRTF DENF L H G GILSMANAGPNTNGSQFF+CTVD PWLDGKHVVFGSVVDG+DVV+K+ES GSP+G T+ +KDCG++
Sbjct: 51 ANPKVFFDIEAGGEEVGRITFELRSDVVPETAENFRALCTGENGF-GYKGSTFHRVIPQFMCQGGDFTNHNGTGGKSIYGRTFSDENFALKHEGKGILSMANAGPNTNGSQFFICTVDTPWLDGKHVVFGSVVDGIDVVEKVESYGSPNGATSKTIVIKDCGEI 213
BLAST of mRNA_A-nodosum_M_contig1005.20.1 vs. uniprot
Match: UPI0001CB95F6 (peptidyl-prolyl cis-trans isomerase-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB95F6) HSP 1 Score: 265 bits (677), Expect = 3.200e-84 Identity = 124/165 (75.15%), Postives = 135/165 (81.82%), Query Frame = 1 Query: 148 MANPQVFFDMDAGGEALGRITMELRADVAPKTAENFRQLCTGEGGVKGYKGSAFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFQLSHNGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLESLGSPSGKPLTTVTVKDCGQL 642
MANP+VFFD+ AGG +GRITMELRADV PKTAENFR LCTGE G YKGS FHR+IPQFMCQGGDFTRGDGTGG SIYG F DENF+L H GPGILSMAN GPNTNGSQFFLCT WL+GKHVVFG V +GMDVVKK+ES GS SGK T+ + +CGQL
Sbjct: 1 MANPKVFFDVSAGGTPIGRITMELRADVVPKTAENFRALCTGEKGKNTYKGSTFHRVIPQFMCQGGDFTRGDGTGGVSIYGAKFEDENFKLQHTGPGILSMANCGPNTNGSQFFLCTAKTEWLNGKHVVFGQVTEGMDVVKKIESYGSSSGKTSKTIKIDNCGQL 165
BLAST of mRNA_A-nodosum_M_contig1005.20.1 vs. uniprot
Match: A0A8C5G9U8_9TELE (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5G9U8_9TELE) HSP 1 Score: 263 bits (673), Expect = 1.240e-83 Identity = 126/165 (76.36%), Postives = 137/165 (83.03%), Query Frame = 1 Query: 148 MANPQVFFDMDAGGEALGRITMELRADVAPKTAENFRQLCTGEGGVKGYKGSAFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFQLSHNGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLESLGSPSGKPLTTVTVKDCGQL 642
MA P+VFFD+ AGG A+GRI MELRADV PKTAENFR LCTGE G GYKGS+FHR+IP FMCQGGDFT +GTGG+SIYG F DENFQL H GPGILSMANAGPNTNGSQFFLCTV WLDGKHVVFG VV+GMDVVKK+ES GS SGK + + V DCGQL
Sbjct: 1 MAKPRVFFDITAGGNAVGRIVMELRADVVPKTAENFRALCTGEKGF-GYKGSSFHRVIPDFMCQGGDFTNHNGTGGKSIYGEKFADENFQLKHTGPGILSMANAGPNTNGSQFFLCTVKTAWLDGKHVVFGQVVEGMDVVKKIESFGSSSGKTNSKIVVADCGQL 164
BLAST of mRNA_A-nodosum_M_contig1005.20.1 vs. uniprot
Match: A0A6T5PIT7_HETAK (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5PIT7_HETAK) HSP 1 Score: 264 bits (674), Expect = 3.280e-83 Identity = 122/170 (71.76%), Postives = 138/170 (81.18%), Query Frame = 1 Query: 133 RQTLAMANPQVFFDMDAGGEALGRITMELRADVAPKTAENFRQLCTGEGGVKGYKGSAFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFQLSHNGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLESLGSPSGKPLTTVTVKDCGQL 642
++ L M+ P+VFFDM+ GGE +GRI ELR+DVAPKT ENFR LCTGE G+ GYKGS FHR+IP FMCQGGD T GDG GG SIYGRTFPDENF L H G GILSMANAGPNTNGSQFF+CTV+ PWLDGKH VFG VV+GMDVV+K+E +GSP G+ V V DCGQL
Sbjct: 35 KKHLTMSLPKVFFDMEVGGEPVGRILFELRSDVAPKTVENFRALCTGETGI-GYKGSTFHRVIPDFMCQGGDITSGDGRGGMSIYGRTFPDENFDLPHTGEGILSMANAGPNTNGSQFFICTVETPWLDGKHTVFGKVVEGMDVVRKIEGVGSPQGRTAAPVVVADCGQL 203
BLAST of mRNA_A-nodosum_M_contig1005.20.1 vs. uniprot
Match: E1Z6E6_CHLVA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Chlorella clade TaxID=2511126 RepID=E1Z6E6_CHLVA) HSP 1 Score: 262 bits (670), Expect = 4.580e-83 Identity = 126/171 (73.68%), Postives = 137/171 (80.12%), Query Frame = 1 Query: 148 MANPQVFFDMDAGGEALGRITMELRADVAPKTAENFRQLCTGEGGVKG------YKGSAFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFQLSHNGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLESLGSPSGKPLTTVTVKDCGQL 642
M NP+VFFD+ AG LGRI MELRADV PKTAENFR LCTGE G +KGS FHR+IPQFMCQGGDFTRG+GTGGESIYG F DENFQL H G G+LSMANAGPNTNGSQFFLCTV PWLDGKHVVFG VV+G+DVVKK+ES GS SGK T+T+ DCGQL
Sbjct: 1 MGNPRVFFDVTAGSTPLGRIVMELRADVVPKTAENFRCLCTGEKGTGRSGKPLHFKGSTFHRVIPQFMCQGGDFTRGNGTGGESIYGEKFADENFQLKHTGAGVLSMANAGPNTNGSQFFLCTVSTPWLDGKHVVFGQVVEGLDVVKKVESYGSGSGKTSQTITIADCGQL 171
BLAST of mRNA_A-nodosum_M_contig1005.20.1 vs. uniprot
Match: A0A7S2P287_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P287_9STRA) HSP 1 Score: 263 bits (673), Expect = 4.800e-83 Identity = 125/172 (72.67%), Postives = 144/172 (83.72%), Query Frame = 1 Query: 133 RQTLAM--ANPQVFFDMDAGGEALGRITMELRADVAPKTAENFRQLCTGEGGVKGYKGSAFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFQLSHNGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLESLGSPSGKPLTTVTVKDCGQL 642
R ++AM NP+VFFDM+ GGE GRI ELRADVAPKTAENFR LCTGE G GYKGS+FHR+IPQFMCQGGDFTRGDGTGG+SIYG FPDE+F L H G GILSMANAGPNTNGSQFF+CTVD PWLDG+HVVFG+VV+G++VV +E +GS SG+ TV VKDCG++
Sbjct: 32 RSSVAMMAGNPKVFFDMEVGGEDAGRIVFELRADVAPKTAENFRALCTGEKGF-GYKGSSFHRVIPQFMCQGGDFTRGDGTGGKSIYGEKFPDEDFSLPHVGKGILSMANAGPNTNGSQFFICTVDTPWLDGRHVVFGNVVEGIEVVDAIEEVGSQSGRTSKTVVVKDCGEV 202
BLAST of mRNA_A-nodosum_M_contig1005.20.1 vs. uniprot
Match: A0A1Y2BVA4_9FUNG (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BVA4_9FUNG) HSP 1 Score: 262 bits (669), Expect = 4.940e-83 Identity = 124/165 (75.15%), Postives = 139/165 (84.24%), Query Frame = 1 Query: 148 MANPQVFFDMDAGGEALGRITMELRADVAPKTAENFRQLCTGEGGVKGYKGSAFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFQLSHNGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLESLGSPSGKPLTTVTVKDCGQL 642
MANP+VFF++ + G ALG+I MELRADV PKTAENFR LCTGE G GYKGS+FHR+IPQFMCQGGDFTR +GTGG+SIYG F DENFQL H+GPG+LSMANAG NTNGSQFFLCTV PWLDGKHVVFG VV+GMDVV K+ESLGSPSG V + +CGQL
Sbjct: 1 MANPRVFFNITSNGAALGKIVMELRADVVPKTAENFRALCTGEKGF-GYKGSSFHRVIPQFMCQGGDFTRHNGTGGKSIYGEKFADENFQLKHDGPGVLSMANAGRNTNGSQFFLCTVKTPWLDGKHVVFGKVVEGMDVVTKIESLGSPSGATKAKVIISECGQL 164
BLAST of mRNA_A-nodosum_M_contig1005.20.1 vs. uniprot
Match: A0A812VDW2_9DINO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812VDW2_9DINO) HSP 1 Score: 263 bits (673), Expect = 1.080e-82 Identity = 129/174 (74.14%), Postives = 137/174 (78.74%), Query Frame = 1 Query: 139 TLAMANPQVFFDMDAGGEALGRITMELRADVAPKTAENFRQLCTGEGGVKG------YKGSAFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFQLSHNGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLESLGSPSGKPLTTVTVKDCGQL 642
T+AMA P VFFDM GG GRITMELRADVAPKTAENFR LCTGE G +KGSAFHR+IP FMCQGGDFT G+GTGGESIYG F DENF L H GPGILSMANAGPNTNGSQFFLCTV WLDGKHVVFGSV DGMDVVKK+E++GS SGK V + DCGQL
Sbjct: 54 TIAMAKPVVFFDMSIGGTPAGRITMELRADVAPKTAENFRALCTGEKGTGKSGKPLHFKGSAFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFADENFTLKHTGPGILSMANAGPNTNGSQFFLCTVKTQWLDGKHVVFGSVTDGMDVVKKIEAVGSQSGKTSKPVVIADCGQL 227 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1005.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1005.20.1 >prot_A-nodosum_M_contig1005.20.1 ID=prot_A-nodosum_M_contig1005.20.1|Name=mRNA_A-nodosum_M_contig1005.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=166bp MANPQVFFDMDAGGEALGRITMELRADVAPKTAENFRQLCTGEGGVKGYKback to top mRNA from alignment at A-nodosum_M_contig1005:143565..152332- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1005.20.1 ID=mRNA_A-nodosum_M_contig1005.20.1|Name=mRNA_A-nodosum_M_contig1005.20.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8768bp|location=Sequence derived from alignment at A-nodosum_M_contig1005:143565..152332- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1005:143565..152332- >mRNA_A-nodosum_M_contig1005.20.1 ID=mRNA_A-nodosum_M_contig1005.20.1|Name=mRNA_A-nodosum_M_contig1005.20.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=498bp|location=Sequence derived from alignment at A-nodosum_M_contig1005:143565..152332- (Ascophyllum nodosum dioecious)back to top |